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Conserved domains on  [gi|2462577525|ref|XP_054200058|]
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endoplasmic reticulum junction formation protein lunapark isoform X3 [Homo sapiens]

Protein Classification

zinc-ribbon domain-containing protein( domain architecture ID 10562191)

zinc-ribbon domain-containing protein such as vertebrate endoplasmic reticulum junction formation protein lunapark, an endoplasmic reticulum (ER)-shaping membrane protein that plays a role in determining ER morphology

Gene Ontology:  GO:0016020|GO:0046872
PubMed:  32851833

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
zinc_ribbon_10 pfam10058
Predicted integral membrane zinc-ribbon metal-binding protein; This domain, found in various ...
 180-230 4.50e-25

Predicted integral membrane zinc-ribbon metal-binding protein; This domain, found in various hypothetical bacterial and eukaryotic metal-binding proteins is a probably zinc-ribbon.


:

Pssm-ID: 401882 [Multi-domain]  Cd Length: 51  Bit Score: 95.78  E-value: 4.50e-25
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2462577525 180 ALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFLN 230
Cdd:pfam10058   1 WFDRVLDYLVGDDPKNRYALICSKCRSHNGLAPKEEYEYVTYRCPNCGALN 51
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 75-176 7.45e-05

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.93  E-value: 7.45e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462577525   75 EPPSAGAAVTARpgqeirqrtAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPAlsSNVLPRHLGSPA 154
Cdd:PHA03247  2803 DPADPPAAVLAP---------AAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPG--GDVRRRPPSRSP 2871

                           90       100
                   ....*....|....*....|..
gi 2462577525  155 TSVPGMGLHPPGPPLARPILPR 176
Cdd:PHA03247  2872 AAKPAAPARPPVRRLARPAVSR 2893
 
Name Accession Description Interval E-value
zinc_ribbon_10 pfam10058
Predicted integral membrane zinc-ribbon metal-binding protein; This domain, found in various ...
 180-230 4.50e-25

Predicted integral membrane zinc-ribbon metal-binding protein; This domain, found in various hypothetical bacterial and eukaryotic metal-binding proteins is a probably zinc-ribbon.


Pssm-ID: 401882 [Multi-domain]  Cd Length: 51  Bit Score: 95.78  E-value: 4.50e-25
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2462577525 180 ALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFLN 230
Cdd:pfam10058   1 WFDRVLDYLVGDDPKNRYALICSKCRSHNGLAPKEEYEYVTYRCPNCGALN 51
COG5415 COG5415
Predicted integral membrane metal-binding protein [General function prediction only];
7-236 5.57e-09

Predicted integral membrane metal-binding protein [General function prediction only];


Pssm-ID: 227702 [Multi-domain]  Cd Length: 251  Bit Score: 56.15  E-value: 5.57e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462577525   7 AFPLIIWSI---RTVIIFFFSKRTERNNEALDDLKSQRKKILEEVMEKETYKTAKLILERFDpdskkakeceppsagaav 83
Cdd:COG5415    75 ALLLGSGSLymfRWALTKLYEFRNNRRLRKLAKLRAIHRKKLEKLKEETHYNATSSIIQKYS------------------ 136

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462577525  84 tarpgqeiRQRTAAQRNLSPTPAspnqgpppqvpvspgppkdssapggppertvtpalssnvlprhlgspATSVPGMGLH 163
Cdd:COG5415   137 --------EELNAKYQELNNLKT-----------------------------------------------EKEKFKKESH 161

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2462577525 164 PPGPPlarpilpRERGALDRIVEYLVGDGPQ---NRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFLNPARKTR 236
Cdd:COG5415   162 VKKKE-------DSDAWFDKVISVLAGGNELdlsPFKALICPQCHHHNGLYRLAEKPIIEFICPHCNHKNDEVKER 230
PHA03247 PHA03247
large tegument protein UL36; Provisional
 75-176 7.45e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.93  E-value: 7.45e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462577525   75 EPPSAGAAVTARpgqeirqrtAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPAlsSNVLPRHLGSPA 154
Cdd:PHA03247  2803 DPADPPAAVLAP---------AAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPG--GDVRRRPPSRSP 2871

                           90       100
                   ....*....|....*....|..
gi 2462577525  155 TSVPGMGLHPPGPPLARPILPR 176
Cdd:PHA03247  2872 AAKPAAPARPPVRRLARPAVSR 2893
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 91-182 2.80e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 39.60  E-value: 2.80e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462577525  91 IRQRTAAQRNLSPTPASPNQGPPPQVPVSPG-PPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHP----P 165
Cdd:NF041121   15 MGRAAAPPSPEGPAPTAASQPATPPPPAAPPsPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALpvrvP 94

                          90       100       110
                  ....*....|....*....|....*....|.
gi 2462577525 166 GP--------------PLARPILPRERGALD 182
Cdd:NF041121   95 APpalpnplelaralrPLKRRVPSPRRVELD 125
 
Name Accession Description Interval E-value
zinc_ribbon_10 pfam10058
Predicted integral membrane zinc-ribbon metal-binding protein; This domain, found in various ...
 180-230 4.50e-25

Predicted integral membrane zinc-ribbon metal-binding protein; This domain, found in various hypothetical bacterial and eukaryotic metal-binding proteins is a probably zinc-ribbon.


Pssm-ID: 401882 [Multi-domain]  Cd Length: 51  Bit Score: 95.78  E-value: 4.50e-25
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2462577525 180 ALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFLN 230
Cdd:pfam10058   1 WFDRVLDYLVGDDPKNRYALICSKCRSHNGLAPKEEYEYVTYRCPNCGALN 51
COG5415 COG5415
Predicted integral membrane metal-binding protein [General function prediction only];
7-236 5.57e-09

Predicted integral membrane metal-binding protein [General function prediction only];


Pssm-ID: 227702 [Multi-domain]  Cd Length: 251  Bit Score: 56.15  E-value: 5.57e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462577525   7 AFPLIIWSI---RTVIIFFFSKRTERNNEALDDLKSQRKKILEEVMEKETYKTAKLILERFDpdskkakeceppsagaav 83
Cdd:COG5415    75 ALLLGSGSLymfRWALTKLYEFRNNRRLRKLAKLRAIHRKKLEKLKEETHYNATSSIIQKYS------------------ 136

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462577525  84 tarpgqeiRQRTAAQRNLSPTPAspnqgpppqvpvspgppkdssapggppertvtpalssnvlprhlgspATSVPGMGLH 163
Cdd:COG5415   137 --------EELNAKYQELNNLKT-----------------------------------------------EKEKFKKESH 161

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2462577525 164 PPGPPlarpilpRERGALDRIVEYLVGDGPQ---NRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFLNPARKTR 236
Cdd:COG5415   162 VKKKE-------DSDAWFDKVISVLAGGNELdlsPFKALICPQCHHHNGLYRLAEKPIIEFICPHCNHKNDEVKER 230
PHA03247 PHA03247
large tegument protein UL36; Provisional
 75-176 7.45e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.93  E-value: 7.45e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462577525   75 EPPSAGAAVTARpgqeirqrtAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPAlsSNVLPRHLGSPA 154
Cdd:PHA03247  2803 DPADPPAAVLAP---------AAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPG--GDVRRRPPSRSP 2871

                           90       100
                   ....*....|....*....|..
gi 2462577525  155 TSVPGMGLHPPGPPLARPILPR 176
Cdd:PHA03247  2872 AAKPAAPARPPVRRLARPAVSR 2893
PHA03247 PHA03247
large tegument protein UL36; Provisional
 76-175 8.42e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.54  E-value: 8.42e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462577525   76 PPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPAlSSNVLPRHLGSPAT 155
Cdd:PHA03247  2743 AVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADP-PAAVLAPAAALPPA 2821

                           90       100
                   ....*....|....*....|....*.
gi 2462577525  156 SVPGMGLHPP------GPPLARPILP 175
Cdd:PHA03247  2822 ASPAGPLPPPtsaqptAPPPPPGPPP 2847
PHA03247 PHA03247
large tegument protein UL36; Provisional
 76-175 1.29e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.16  E-value: 1.29e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462577525   76 PPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTP------ALSSNVLPRH 149
Cdd:PHA03247  2722 PPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRpavaslSESRESLPSP 2801

                           90       100
                   ....*....|....*....|....*.
gi 2462577525  150 LGSPATSVPGMGLHPPGPPLARPILP 175
Cdd:PHA03247  2802 WDPADPPAAVLAPAAALPPAASPAGP 2827
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
 76-209 5.37e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.97  E-value: 5.37e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462577525  76 PPSAGAAVTARPGQEIRQRTAAQRNLSPTPA-----SPNQGPPPQVP---VSPGPPKDSSAPGGPPErtVTPALSSNVLP 147
Cdd:PRK14959  389 PASGGAATIPTPGTQGPQGTAPAAGMTPSSAapatpAPSAAPSPRVPwddAPPAPPRSGIPPRPAPR--MPEASPVPGAP 466

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462577525 148 RHLGSPATSVPGMGlHPPGPPLARPILPRergALDRIVEYLVG-DGPQNRYALICQQCFSHNG 209
Cdd:PRK14959  467 DSVASASDAPPTLG-DPSDTAEHTPSGPR---TWDGFLEFCQGrNGQGGRLATVLRQATPEHA 525
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 76-191 7.42e-04

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 41.61  E-value: 7.42e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462577525   76 PPSAGAAVTARPGQEIRQRTAAQRNLSPTPaspnQGPPPQVPVSPGP----PKDSSAPGgPPERTVTPALSSNVLPRHLG 151
Cdd:PRK10263   786 APQPQYQQPQQPVAPQPQYQQPQQPVAPQP----QYQQPQQPVAPQPqyqqPQQPVAPQ-PQDTLLHPLLMRNGDSRPLH 860

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|
gi 2462577525  152 SPATSVPGMGLHPPGPPLARPILPRERGALDRIVEYLVGD 191
Cdd:PRK10263   861 KPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLAD 900
PRK13729 PRK13729
conjugal transfer pilus assembly protein TraB; Provisional
 85-173 1.35e-03

conjugal transfer pilus assembly protein TraB; Provisional


Pssm-ID: 184281 [Multi-domain]  Cd Length: 475  Bit Score: 40.58  E-value: 1.35e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462577525  85 ARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGG-----PPERTVTPAlssnvlprhlgSPATSVPG 159
Cdd:PRK13729  107 EKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNtpvsfPPQGSVAVP-----------PPTAFYPG 175

                          90
                  ....*....|....
gi 2462577525 160 MGLHPPGPPLARPI 173
Cdd:PRK13729  176 NGVTPPPQVTYQSV 189
PHA03247 PHA03247
large tegument protein UL36; Provisional
 76-175 1.96e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 40.31  E-value: 1.96e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462577525   76 PPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGP-PPQVPVSPGPPKDSSAPGGPPerTVTPALSSNVLPRHLGSPA 154
Cdd:PHA03247  2813 APAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSlPLGGSVAPGGDVRRRPPSRSP--AAKPAAPARPPVRRLARPA 2890

                           90       100
                   ....*....|....*....|.
gi 2462577525  155 TSVPGMGLHPPGPPLARPILP 175
Cdd:PHA03247  2891 VSRSTESFALPPDQPERPPQP 2911
PHA03247 PHA03247
large tegument protein UL36; Provisional
 76-175 2.58e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 39.92  E-value: 2.58e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462577525   76 PPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGP-PPQVPVSPGPPKDSS---APGGPPERTVTPALSSNVLPRHLG 151
Cdd:PHA03247  2647 PPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPrRRAARPTVGSLTSLAdppPPPPTPEPAPHALVSATPLPPGPA 2726

                           90       100
                   ....*....|....*....|....*
gi 2462577525  152 SPATSVPGMGLHP-PGPPLARPILP 175
Cdd:PHA03247  2727 AARQASPALPAAPaPPAVPAGPATP 2751
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 91-182 2.80e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 39.60  E-value: 2.80e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462577525  91 IRQRTAAQRNLSPTPASPNQGPPPQVPVSPG-PPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHP----P 165
Cdd:NF041121   15 MGRAAAPPSPEGPAPTAASQPATPPPPAAPPsPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALpvrvP 94

                          90       100       110
                  ....*....|....*....|....*....|.
gi 2462577525 166 GP--------------PLARPILPRERGALD 182
Cdd:NF041121   95 APpalpnplelaralrPLKRRVPSPRRVELD 125
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
76-190 3.85e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 38.99  E-value: 3.85e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462577525  76 PPSAGAAVTARPGQEIRQRTAAQrnlsPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERtVTPALSSNVLPrhlgspat 155
Cdd:PRK14971  391 QPSAAAAASPSPSQSSAAAQPSA----PQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQA-VRPAQFKEEKK-------- 457

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2462577525 156 sVPGMGLHPPGPPLARPILPRERGALDRIVEYLVG 190
Cdd:PRK14971  458 -IPVSKVSSLGPSTLRPIQEKAEQATGNIKEAPTG 491
PHA03247 PHA03247
large tegument protein UL36; Provisional
 76-171 4.16e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 39.15  E-value: 4.16e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462577525   76 PPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERtvTPALSSNVLPRHLGSPAT 155
Cdd:PHA03247  2870 SPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQP--QPPPPPPPRPQPPLAPTT 2947

                           90
                   ....*....|....*.
gi 2462577525  156 SVPGMGLHPPGPPLAR 171
Cdd:PHA03247  2948 DPAGAGEPSGAVPQPW 2963
PHA03378 PHA03378
EBNA-3B; Provisional
 77-196 4.43e-03

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 38.89  E-value: 4.43e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462577525  77 PSAGAAVTARPgqeirqRTAAQRNLSPTPASPNQGPPPQVPVSPG-PPKDSSAPGGPPERTVTPALSSNVLPRHLGSPAT 155
Cdd:PHA03378  676 PSPTGANTMLP------IQWAPGTMQPPPRAPTPMRPPAAPPGRAqRPAAATGRARPPAAAPGRARPPAAAPGRARPPAA 749

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 2462577525 156 SvPGMGLHPPGPPLARPILPRERGALDRIVEYLVGDGPQNR 196
Cdd:PHA03378  750 A-PGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQR 789
PHA03247 PHA03247
large tegument protein UL36; Provisional
 73-180 4.46e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 39.15  E-value: 4.46e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462577525   73 ECEPPSAGAAVTAR------PGQEIRQRT-AAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNV 145
Cdd:PHA03247  2572 RPAPRPSEPAVTSRarrpdaPPQSARPRApVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPER 2651

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 2462577525  146 LPRHLGSPATSVPGMGLHPPGPPLAR--PILPRERGA 180
Cdd:PHA03247  2652 PRDDPAPGRVSRPRRARRLGRAAQASspPQRPRRRAA 2688
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 67-176 9.55e-03

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 38.13  E-value: 9.55e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462577525  67 DSKKAKECEPP--SAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSN 144
Cdd:PTZ00449  539 ESDEPKEGGKPgeTKEGEVGKKPGPAKEHKPSKIPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPKSPKLPELL 618

                          90       100       110
                  ....*....|....*....|....*....|..
gi 2462577525 145 VLPRHLGSPATsvPGMGLHPPGPplARPILPR 176
Cdd:PTZ00449  619 DIPKSPKRPES--PKSPKRPPPP--QRPSSPE 646
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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