|
Name |
Accession |
Description |
Interval |
E-value |
| KISc_CENP_E |
cd01374 |
Kinesin motor domain, CENP-E/KIP2-like subgroup; Kinesin motor domain, CENP-E/KIP2-like ... |
6-329 |
4.13e-171 |
|
Kinesin motor domain, CENP-E/KIP2-like subgroup; Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276825 [Multi-domain] Cd Length: 321 Bit Score: 528.83 E-value: 4.13e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 6 AVAVCVRVRPLNSREESLGEtaQVYWKTDNNVIYQVD-GSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFA 84
Cdd:cd01374 1 KITVTVRVRPLNSREIGINE--QVAWEIDNDTIYLVEpPSTSFTFDHVFGGDSTNREVYELIAKPVVKSALEGYNGTIFA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 85 YGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNETITDLLCGTqkMKPLIIREDVNRNVYV 164
Cdd:cd01374 79 YGQTSSGKTFTMSGDEDEPGIIPLAIRDIFSKIQDTPDREFLLRVSYLEIYNEKINDLLSPT--SQNLKIRDDVEKGVYV 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 165 ADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPsnCEGSVKVSHLNLVDLAGSERAAQ 244
Cdd:cd01374 157 AGLTEEIVSSPEHALSLIARGEKNRHVGETDMNERSSRSHTIFRITIESSERGEL--EEGTVRVSTLNLIDLAGSERAAQ 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 245 TGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITPVS--FDETLTALQF 322
Cdd:cd01374 235 TGAAGVRRKEGSHINKSLLTLGTVISKLSEGKVGGHIPYRDSKLTRILQPSLGGNSRTAIICTITPAEshVEETLNTLKF 314
|
....*..
gi 2462594594 323 ASTAKYM 329
Cdd:cd01374 315 ASRAKKI 321
|
|
| KISc |
smart00129 |
Kinesin motor, catalytic domain. ATPase; Microtubule-dependent molecular motors that play ... |
6-336 |
4.46e-143 |
|
Kinesin motor, catalytic domain. ATPase; Microtubule-dependent molecular motors that play important roles in intracellular transport of organelles and in cell division.
Pssm-ID: 214526 [Multi-domain] Cd Length: 335 Bit Score: 449.33 E-value: 4.46e-143
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 6 AVAVCVRVRPLNSREESLGETAQVYW------KTDNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYN 79
Cdd:smart00129 1 NIRVVVRVRPLNKREKSRKSPSVVPFpdkvgkTLTVRSPKNRQGEKKFTFDKVFDATASQEDVFEETAAPLVDSVLEGYN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 80 GTIFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKF-PDREFLLRVSYMEIYNETITDLLCGTQKmkPLIIREDV 158
Cdd:smart00129 81 ATIFAYGQTGSGKTYTMIGTPDSPGIIPRALKDLFEKIDKReEGWQFSVKVSYLEIYNEKIRDLLNPSSK--KLEIREDE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 159 NRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSnceGSVKVSHLNLVDLAG 238
Cdd:smart00129 159 KGGVYVKGLTEISVSSFEEVYNLLEKGNKNRTVAATKMNEESSRSHAVFTITVEQKIKNSSS---GSGKASKLNLVDLAG 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 239 SERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITP--VSFDET 316
Cdd:smart00129 236 SERAKKTGAEGDRLKEAGNINKSLSALGNVINALAQHSKSRHIPYRDSKLTRLLQDSLGGNSKTLMIANVSPssSNLEET 315
|
330 340
....*....|....*....|
gi 2462594594 317 LTALQFASTAKYMKNTPYVN 336
Cdd:smart00129 316 LSTLRFASRAKEIKNKPIVN 335
|
|
| Kinesin |
pfam00225 |
Kinesin motor domain; |
12-327 |
8.96e-139 |
|
Kinesin motor domain;
Pssm-ID: 459720 [Multi-domain] Cd Length: 326 Bit Score: 436.62 E-value: 8.96e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 12 RVRPLNSREESLGETAQVY------WKTDNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAY 85
Cdd:pfam00225 1 RVRPLNEREKERGSSVIVSvesvdsETVESSHLTNKNRTKTFTFDKVFDPEATQEDVYEETAKPLVESVLEGYNVTIFAY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 86 GQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPDR-EFLLRVSYMEIYNETITDLLCGTQKMK-PLIIREDVNRNVY 163
Cdd:pfam00225 81 GQTGSGKTYTMEGSDEQPGIIPRALEDLFDRIQKTKERsEFSVKVSYLEIYNEKIRDLLSPSNKNKrKLRIREDPKKGVY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 164 VADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSncEGSVKVSHLNLVDLAGSERAA 243
Cdd:pfam00225 161 VKGLTEVEVSSAEEVLELLQLGNKNRTVAATKMNEESSRSHAIFTITVEQRNRSTGG--EESVKTGKLNLVDLAGSERAS 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 244 QTGAA-GVRLKEGCNINRSLFILGQVIKKLSDGQvGGFINYRDSKLTRILQNSLGGNAKTRIICTITPVS--FDETLTAL 320
Cdd:pfam00225 239 KTGAAgGQRLKEAANINKSLSALGNVISALADKK-SKHIPYRDSKLTRLLQDSLGGNSKTLMIANISPSSsnYEETLSTL 317
|
....*..
gi 2462594594 321 QFASTAK 327
Cdd:pfam00225 318 RFASRAK 324
|
|
| KISc |
cd00106 |
Kinesin motor domain; Kinesin motor domain. This catalytic (head) domain has ATPase activity ... |
6-327 |
1.24e-136 |
|
Kinesin motor domain; Kinesin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), in some its is found in the middle (M-type), or C-terminal (C-type). N-type and M-type kinesins are (+) end-directed motors, while C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276812 [Multi-domain] Cd Length: 326 Bit Score: 430.52 E-value: 1.24e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 6 AVAVCVRVRPLNSREeslGETAQVYWKTDNNVIYQVD-------GSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGY 78
Cdd:cd00106 1 NVRVAVRVRPLNGRE---ARSAKSVISVDGGKSVVLDppknrvaPPKTFAFDAVFDSTSTQEEVYEGTAKPLVDSALEGY 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 79 NGTIFAYGQTASGKTYTMMGS-EDHLGVIPRAIHDIFQKIKKFP--DREFLLRVSYMEIYNETITDLLCGTQKmKPLIIR 155
Cdd:cd00106 78 NGTIFAYGQTGSGKTYTMLGPdPEQRGIIPRALEDIFERIDKRKetKSSFSVSASYLEIYNEKIYDLLSPVPK-KPLSLR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 156 EDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKgepSNCEGSVKVSHLNLVD 235
Cdd:cd00106 157 EDPKRGVYVKGLTEVEVGSLEDALELLDAGNKNRTTASTNMNEHSSRSHAVFTIHVKQRNR---EKSGESVTSSKLNLVD 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 236 LAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQvGGFINYRDSKLTRILQNSLGGNAKTRIICTITP--VSF 313
Cdd:cd00106 234 LAGSERAKKTGAEGDRLKEGGNINKSLSALGKVISALADGQ-NKHIPYRDSKLTRLLQDSLGGNSKTIMIACISPssENF 312
|
330
....*....|....
gi 2462594594 314 DETLTALQFASTAK 327
Cdd:cd00106 313 EETLSTLRFASRAK 326
|
|
| KISc_KIF4 |
cd01372 |
Kinesin motor domain, KIF4-like subfamily; Kinesin motor domain, KIF4-like subfamily. Members ... |
6-330 |
2.93e-106 |
|
Kinesin motor domain, KIF4-like subfamily; Kinesin motor domain, KIF4-like subfamily. Members of this group seem to perform a variety of functions, and have been implicated in neuronal organelle transport and chromosome segregation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276823 [Multi-domain] Cd Length: 341 Bit Score: 343.93 E-value: 2.93e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 6 AVAVCVRVRPLNSREESLGETAQVYWkTDNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAY 85
Cdd:cd01372 2 SVRVAVRVRPLLPKEIIEGCRICVSF-VPGEPQVTVGTDKSFTFDYVFDPSTEQEEVYNTCVAPLVDGLFEGYNATVLAY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 86 GQTASGKTYTMMGS------EDHLGVIPRAIHDIFQKIKKFPDR-EFLLRVSYMEIYNETITDLLC-GTQKMKPLIIRED 157
Cdd:cd01372 81 GQTGSGKTYTMGTAytaeedEEQVGIIPRAIQHIFKKIEKKKDTfEFQLKVSFLEIYNEEIRDLLDpETDKKPTISIRED 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 158 VNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNC-----EGSVKVSHLN 232
Cdd:cd01372 161 SKGGITIVGLTEVTVLSAEDMMSCLEQGSLSRTTASTAMNSQSSRSHAIFTITLEQTKKNGPIAPmsaddKNSTFTSKFH 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 233 LVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQ-VGGFINYRDSKLTRILQNSLGGNAKTRIICTITPV 311
Cdd:cd01372 241 FVDLAGSERLKRTGATGDRLKEGISINSGLLALGNVISALGDESkKGAHVPYRDSKLTRLLQDSLGGNSHTLMIACVSPA 320
|
330 340
....*....|....*....|.
gi 2462594594 312 S--FDETLTALQFASTAKYMK 330
Cdd:cd01372 321 DsnFEETLNTLKYANRARNIK 341
|
|
| KISc_KIF3 |
cd01371 |
Kinesin motor domain, kinesins II or KIF3_like proteins; Kinesin motor domain, kinesins II or ... |
6-327 |
3.84e-100 |
|
Kinesin motor domain, kinesins II or KIF3_like proteins; Kinesin motor domain, kinesins II or KIF3_like proteins. Subgroup of kinesins, which form heterotrimers composed of 2 kinesins and one non-motor accessory subunit. Kinesins II play important roles in ciliary transport, and have been implicated in neuronal transport, melanosome transport, the secretory pathway, and mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this group the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276822 [Multi-domain] Cd Length: 334 Bit Score: 326.34 E-value: 3.84e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 6 AVAVCVRVRPLNSREESLGETAQVYWKTDNNVIyQVDGS--------KSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQG 77
Cdd:cd01371 2 NVKVVVRCRPLNGKEKAAGALQIVDVDEKRGQV-SVRNPkataneppKTFTFDAVFDPNSKQLDVYDETARPLVDSVLEG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 78 YNGTIFAYGQTASGKTYTMMG--SEDHL-GVIPRAIHDIFQKIKKFPD-REFLLRVSYMEIYNETITDLLcGTQKMKPLI 153
Cdd:cd01371 81 YNGTIFAYGQTGTGKTYTMEGkrEDPELrGIIPNSFAHIFGHIARSQNnQQFLVRVSYLEIYNEEIRDLL-GKDQTKRLE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 154 IREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSncEGSVKVSHLNL 233
Cdd:cd01371 160 LKERPDTGVYVKDLSMFVVKNADEMEHVMNLGNKNRSVGATNMNEDSSRSHAIFTITIECSEKGEDG--ENHIRVGKLNL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 234 VDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQvGGFINYRDSKLTRILQNSLGGNAKTRIICTITPVS- 312
Cdd:cd01371 238 VDLAGSERQSKTGATGERLKEATKINLSLSALGNVISALVDGK-STHIPYRDSKLTRLLQDSLGGNSKTVMCANIGPADy 316
|
330
....*....|....*.
gi 2462594594 313 -FDETLTALQFASTAK 327
Cdd:cd01371 317 nYDETLSTLRYANRAK 332
|
|
| KISc_KIF1A_KIF1B |
cd01365 |
Kinesin motor domain, KIF1_like proteins; Kinesin motor domain, KIF1_like proteins. KIF1A ... |
7-336 |
1.48e-97 |
|
Kinesin motor domain, KIF1_like proteins; Kinesin motor domain, KIF1_like proteins. KIF1A (Unc104) transports synaptic vesicles to the nerve terminal, KIF1B has been implicated in transport of mitochondria. Both proteins are expressed in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. In contrast to the majority of dimeric kinesins, most KIF1A/Unc104 kinesins are monomeric motors. A lysine-rich loop in KIF1A binds to the negatively charged C-terminus of tubulin and compensates for the lack of a second motor domain, allowing KIF1A to move processively.
Pssm-ID: 276816 [Multi-domain] Cd Length: 361 Bit Score: 319.68 E-value: 1.48e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 7 VAVCVRVRPLNSREESLGE-----------TAQVYWKTDNNVIYQVDGSKSFNFDRVF--HGNE-----TTKNVYEEIAA 68
Cdd:cd01365 3 VKVAVRVRPFNSREKERNSkcivqmsgketTLKNPKQADKNNKATREVPKSFSFDYSYwsHDSEdpnyaSQEQVYEDLGE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 69 PIIDSAIQGYNGTIFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPDRE--FLLRVSYMEIYNETITDLLCGT 146
Cdd:cd01365 83 ELLQHAFEGYNVCLFAYGQTGSGKSYTMMGTQEQPGIIPRLCEDLFSRIADTTNQNmsYSVEVSYMEIYNEKVRDLLNPK 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 147 QKMKP--LIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFrMILESREKGEPSNCEG 224
Cdd:cd01365 163 PKKNKgnLKVREHPVLGPYVEDLSKLAVTSYEDIQDLMDEGNKSRTVAATNMNDTSSRSHAVF-TIVLTQKRHDAETNLT 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 225 SVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGG------FINYRDSKLTRILQNSLGG 298
Cdd:cd01365 242 TEKVSKISLVDLAGSERASSTGATGDRLKEGANINKSLTTLGKVISALADMSSGKskkkssFIPYRDSVLTWLLKENLGG 321
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2462594594 299 NAKTRIICTITPVS--FDETLTALQFASTAKYMKNTPYVN 336
Cdd:cd01365 322 NSKTAMIAAISPADinYEETLSTLRYADRAKKIVNRAVVN 361
|
|
| KISc_KHC_KIF5 |
cd01369 |
Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup; Kinesin motor domain, ... |
7-327 |
3.02e-97 |
|
Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup; Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup. Members of this group have been associated with organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276820 [Multi-domain] Cd Length: 325 Bit Score: 317.35 E-value: 3.02e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 7 VAVCVRVRPLNSREESLGETAQVYWKTDNNV-IYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAY 85
Cdd:cd01369 4 IKVVCRFRPLNELEVLQGSKSIVKFDPEDTVvIATSETGKTFSFDRVFDPNTTQEDVYNFAAKPIVDDVLNGYNGTIFAY 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 86 GQTASGKTYTMMGS---EDHLGVIPRAIHDIFQKIKKFPDR-EFLLRVSYMEIYNETITDLLcGTQKmKPLIIREDVNRN 161
Cdd:cd01369 84 GQTSSGKTYTMEGKlgdPESMGIIPRIVQDIFETIYSMDENlEFHVKVSYFEIYMEKIRDLL-DVSK-TNLSVHEDKNRG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 162 VYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESRekgepSNCEGSVKVSHLNLVDLAGSER 241
Cdd:cd01369 162 PYVKGATERFVSSPEEVLDVIDEGKSNRHVAVTNMNEESSRSHSIFLINVKQE-----NVETEKKKSGKLYLVDLAGSEK 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 242 AAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQvGGFINYRDSKLTRILQNSLGGNAKTRIICTITPVSFD--ETLTA 319
Cdd:cd01369 237 VSKTGAEGAVLDEAKKINKSLSALGNVINALTDGK-KTHIPYRDSKLTRILQDSLGGNSRTTLIICCSPSSYNesETLST 315
|
....*...
gi 2462594594 320 LQFASTAK 327
Cdd:cd01369 316 LRFGQRAK 323
|
|
| KISc_C_terminal |
cd01366 |
Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins; Kinesin motor domain, ... |
12-324 |
3.39e-96 |
|
Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins; Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins. Ncd is a spindle motor protein necessary for chromosome segregation in meiosis. KIFC2/KIFC3-like kinesins have been implicated in motility of the Golgi apparatus as well as dentritic and axonal transport in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found at the C-terminus (C-type). C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276817 [Multi-domain] Cd Length: 329 Bit Score: 314.53 E-value: 3.39e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 12 RVRPLNSREESLGETAQVYWKTDNNVI---YQVDGSKSFNFDRVFHGNETTKNVYEEIAaPIIDSAIQGYNGTIFAYGQT 88
Cdd:cd01366 9 RVRPLLPSEENEDTSHITFPDEDGQTIeltSIGAKQKEFSFDKVFDPEASQEDVFEEVS-PLVQSALDGYNVCIFAYGQT 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 89 ASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPDR--EFLLRVSYMEIYNETITDLLC-GTQKMKPLIIRED-VNRNVYV 164
Cdd:cd01366 88 GSGKTYTMEGPPESPGIIPRALQELFNTIKELKEKgwSYTIKASMLEIYNETIRDLLApGNAPQKKLEIRHDsEKGDTTV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 165 ADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCEGSvkvshLNLVDLAGSERAAQ 244
Cdd:cd01366 168 TNLTEVKVSSPEEVRQLLKKASKNRSTASTAMNEHSSRSHSVFILHISGRNLQTGEISVGK-----LNLVDLAGSERLNK 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 245 TGAAGVRLKEGCNINRSLFILGQVIKKLSDGQvgGFINYRDSKLTRILQNSLGGNAKTRIICTITPV--SFDETLTALQF 322
Cdd:cd01366 243 SGATGDRLKETQAINKSLSALGDVISALRQKQ--SHIPYRNSKLTYLLQDSLGGNSKTLMFVNISPAesNLNETLNSLRF 320
|
..
gi 2462594594 323 AS 324
Cdd:cd01366 321 AS 322
|
|
| KISc_KIP3_like |
cd01370 |
Kinesin motor domain, KIP3-like subgroup; Kinesin motor domain, KIP3-like subgroup. The yeast ... |
9-327 |
1.19e-92 |
|
Kinesin motor domain, KIP3-like subgroup; Kinesin motor domain, KIP3-like subgroup. The yeast kinesin KIP3 plays a role in positioning the mitotic spindle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276821 [Multi-domain] Cd Length: 345 Bit Score: 305.04 E-value: 1.19e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 9 VCVRVRPLNSREESLG---------------------ETAQVYWKTDNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIA 67
Cdd:cd01370 4 VAVRVRPFSEKEKNEGfrrivkvmdnhmlvfdpkdeeDGFFHGGSNNRDRRKRRNKELKYVFDRVFDETSTQEEVYEETT 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 68 APIIDSAIQGYNGTIFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPD-REFLLRVSYMEIYNETITDLLcgT 146
Cdd:cd01370 84 KPLVDGVLNGYNATVFAYGATGAGKTHTMLGTPQEPGLMVLTMKELFKRIESLKDeKEFEVSMSYLEIYNETIRDLL--N 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 147 QKMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCEgsV 226
Cdd:cd01370 162 PSSGPLELREDAQNGIVVAGLTEHSPKSAEEILELLMKGNRNRTQEPTDANATSSRSHAVLQITVRQQDKTASINQQ--V 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 227 KVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSD-GQVGGFINYRDSKLTRILQNSLGGNAKTRII 305
Cdd:cd01370 240 RQGKLSLIDLAGSERASATNNRGQRLKEGANINRSLLALGNCINALADpGKKNKHIPYRDSKLTRLLKDSLGGNCRTVMI 319
|
330 340
....*....|....*....|....
gi 2462594594 306 CTITP--VSFDETLTALQFASTAK 327
Cdd:cd01370 320 ANISPssSSYEETHNTLKYANRAK 343
|
|
| KISc_KLP2_like |
cd01373 |
Kinesin motor domain, KIF15-like subgroup; Kinesin motor domain, KIF15-like subgroup. Members ... |
6-339 |
3.25e-92 |
|
Kinesin motor domain, KIF15-like subgroup; Kinesin motor domain, KIF15-like subgroup. Members of this subgroup seem to play a role in mitosis and meiosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276824 [Multi-domain] Cd Length: 347 Bit Score: 304.05 E-value: 3.25e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 6 AVAVCVRVRPLNSREESLGETAQVYWKTDNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAY 85
Cdd:cd01373 2 AVKVFVRIRPPAEREGDGEYGQCLKKLSSDTLVLHSKPPKTFTFDHVADSNTNQESVFQSVGKPIVESCLSGYNGTIFAY 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 86 GQTASGKTYTMMG-SEDHL-------GVIPRAIHDIFQKIKKFPDR-----EFLLRVSYMEIYNETITDLLCGTQkmKPL 152
Cdd:cd01373 82 GQTGSGKTYTMWGpSESDNesphglrGVIPRIFEYLFSLIQREKEKagegkSFLCKCSFLEIYNEQIYDLLDPAS--RNL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 153 IIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGepsNCEGSVKVSHLN 232
Cdd:cd01373 160 KLREDIKKGVYVENLVEEYVTSAEDVYQVLSKGWSNRKVAATSMNRESSRSHAVFTCTIESWEKK---ACFVNIRTSRLN 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 233 LVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGF--INYRDSKLTRILQNSLGGNAKTRIICTITP 310
Cdd:cd01373 237 LVDLAGSERQKDTHAEGVRLKEAGNINKSLSCLGHVINALVDVAHGKQrhVCYRDSKLTFLLRDSLGGNAKTAIIANVHP 316
|
330 340 350
....*....|....*....|....*....|.
gi 2462594594 311 VS--FDETLTALQFASTAKYMKNTPYVNEVS 339
Cdd:cd01373 317 SSkcFGETLSTLRFAQRAKLIKNKAVVNEDT 347
|
|
| KISc_BimC_Eg5 |
cd01364 |
Kinesin motor domain, BimC/Eg5 spindle pole proteins; Kinesin motor domain, BimC/Eg5 spindle ... |
7-337 |
4.70e-85 |
|
Kinesin motor domain, BimC/Eg5 spindle pole proteins; Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276815 [Multi-domain] Cd Length: 353 Bit Score: 283.45 E-value: 4.70e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 7 VAVCVRVRPLNSREESLGETAQVYWKTDNNVI---YQVDGS----KSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYN 79
Cdd:cd01364 4 IQVVVRCRPFNLRERKASSHSVVEVDPVRKEVsvrTGGLADksstKTYTFDMVFGPEAKQIDVYRSVVCPILDEVLMGYN 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 80 GTIFAYGQTASGKTYTMMGSE-----------DHLGVIPRAIHDIFQKIKKfPDREFLLRVSYMEIYNETITDLL-CGTQ 147
Cdd:cd01364 84 CTIFAYGQTGTGKTYTMEGDRspneeytweldPLAGIIPRTLHQLFEKLED-NGTEYSVKVSYLEIYNEELFDLLsPSSD 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 148 KMKPLIIREDVNR--NVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGepSNCEGS 225
Cdd:cd01364 163 VSERLRMFDDPRNkrGVIIKGLEEITVHNKDEVYQILEKGAAKRKTAATLMNAQSSRSHSVFSITIHIKETT--IDGEEL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 226 VKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGqvGGFINYRDSKLTRILQNSLGGNAKTRII 305
Cdd:cd01364 241 VKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVER--APHVPYRESKLTRLLQDSLGGRTKTSII 318
|
330 340 350
....*....|....*....|....*....|....
gi 2462594594 306 CTITP--VSFDETLTALQFASTAKYMKNTPYVNE 337
Cdd:cd01364 319 ATISPasVNLEETLSTLEYAHRAKNIKNKPEVNQ 352
|
|
| KISc_KIF23_like |
cd01368 |
Kinesin motor domain, KIF23-like subgroup; Kinesin motor domain, KIF23-like subgroup. Members ... |
7-327 |
2.85e-76 |
|
Kinesin motor domain, KIF23-like subgroup; Kinesin motor domain, KIF23-like subgroup. Members of this group may play a role in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276819 [Multi-domain] Cd Length: 345 Bit Score: 258.09 E-value: 2.85e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 7 VAVCVRVRPLNSREESLGETAQVYWKTDNNVIYQV-DGSKS-------------FNFDRVFHGNETTKNVYEEIAAPIID 72
Cdd:cd01368 3 VKVYLRVRPLSKDELESEDEGCIEVINSTTVVLHPpKGSAAnksernggqketkFSFSKVFGPNTTQKEFFQGTALPLVQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 73 SAIQGYNGTIFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKkfpdrEFLLRVSYMEIYNETITDLL-----CGTQ 147
Cdd:cd01368 83 DLLHGKNGLLFTYGVTNSGKTYTMQGSPGDGGILPRSLDVIFNSIG-----GYSVFVSYIEIYNEYIYDLLepspsSPTK 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 148 KMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMIL---ESREKGEPSNCEG 224
Cdd:cd01368 158 KRQSLRLREDHNGNMYVAGLTEIEVKSTEEARKVLKRGQKNRSVAGTKLNRESSRSHSVFTIKLvqaPGDSDGDVDQDKD 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 225 SVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFIN---YRDSKLTRILQNSLGGNAK 301
Cdd:cd01368 238 QITVSQLSLVDLAGSERTSRTQNTGERLKEAGNINTSLMTLGTCIEVLRENQLQGTNKmvpFRDSKLTHLFQNYFDGEGK 317
|
330 340
....*....|....*....|....*...
gi 2462594594 302 TRIICTITPVS--FDETLTALQFASTAK 327
Cdd:cd01368 318 ASMIVNVNPCAsdYDETLHVMKFSAIAQ 345
|
|
| KISc_KIF9_like |
cd01375 |
Kinesin motor domain, KIF9-like subgroup; Kinesin motor domain, KIF9-like subgroup; might play ... |
6-327 |
2.29e-75 |
|
Kinesin motor domain, KIF9-like subgroup; Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276826 [Multi-domain] Cd Length: 334 Bit Score: 254.81 E-value: 2.29e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 6 AVAVCVRVRPLNSREESL------GETAQVYWKTD--NNVIYQVDGSKSFNFDRVFHgNETTKNVYEEIAAPIIDSAIQG 77
Cdd:cd01375 1 KVQAFVRVRPTDDFAHEMikygedGKSISIHLKKDlrRGVVNNQQEDWSFKFDGVLH-NASQELVYETVAKDVVSSALAG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 78 YNGTIFAYGQTASGKTYTMMGSED---HLGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNETITDLLCGT----QKMK 150
Cdd:cd01375 80 YNGTIFAYGQTGAGKTFTMTGGTEnykHRGIIPRALQQVFRMIEERPTKAYTVHVSYLEIYNEQLYDLLSTLpyvgPSVT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 151 PLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKgEPSncEGSVKVSH 230
Cdd:cd01375 160 PMTILEDSPQNIFIKGLSLHLTSQEEEALSLLFLGETNRIIASHTMNKNSSRSHCIFTIHLEAHSR-TLS--SEKYITSK 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 231 LNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDgQVGGFINYRDSKLTRILQNSLGGNAKTRIICTIT- 309
Cdd:cd01375 237 LNLVDLAGSERLSKTGVEGQVLKEATYINKSLSFLEQAIIALSD-KDRTHVPFRQSKLTHVLRDSLGGNCNTVMVANIYg 315
|
330
....*....|....*....
gi 2462594594 310 -PVSFDETLTALQFASTAK 327
Cdd:cd01375 316 eAAQLEETLSTLRFASRVK 334
|
|
| KIP1 |
COG5059 |
Kinesin-like protein [Cytoskeleton]; |
34-339 |
1.02e-66 |
|
Kinesin-like protein [Cytoskeleton];
Pssm-ID: 227392 [Multi-domain] Cd Length: 568 Bit Score: 237.71 E-value: 1.02e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 34 DNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAYGQTASGKTYTMMGSEDHLGVIPRAIHDI 113
Cdd:COG5059 45 KSHVSLEKSKEGTYAFDKVFGPSATQEDVYEETIKPLIDSLLLGYNCTVFAYGQTGSGKTYTMSGTEEEPGIIPLSLKEL 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 114 FQKIKKFPDR-EFLLRVSYMEIYNETITDLLcgTQKMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYG 192
Cdd:COG5059 125 FSKLEDLSMTkDFAVSISYLEIYNEKIYDLL--SPNEESLNIREDSLLGVKVAGLTEKHVSSKEEILDLLRKGEKNRTTA 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 193 ETKMNQRSSRSHTIFRMILESREKGEPSNCEGSvkvshLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKL 272
Cdd:COG5059 203 STEINDESSRSHSIFQIELASKNKVSGTSETSK-----LSLVDLAGSERAARTGNRGTRLKEGASINKSLLTLGNVINAL 277
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462594594 273 SDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITP--VSFDETLTALQFASTAKYMKNTPYVNEVS 339
Cdd:COG5059 278 GDKKKSGHIPYRESKLTRLLQDSLGGNCNTRVICTISPssNSFEETINTLKFASRAKSIKNKIQVNSSS 346
|
|
| KISc_KIF2_like |
cd01367 |
Kinesin motor domain, KIF2-like group; Kinesin motor domain, KIF2-like group. KIF2 is a ... |
9-327 |
2.18e-66 |
|
Kinesin motor domain, KIF2-like group; Kinesin motor domain, KIF2-like group. KIF2 is a protein expressed in neurons, which has been associated with axonal transport and neuron development; alternative splice forms have been implicated in lysosomal translocation. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found in the middle (M-type) of the protein chain. M-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second (KIF2 may be slower). To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276818 [Multi-domain] Cd Length: 328 Bit Score: 228.72 E-value: 2.18e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 9 VCVRVRPLNSREESLGETAQVYWKTDNNVI-----YQVDGSK-----SFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGY 78
Cdd:cd01367 4 VCVRKRPLNKKEVAKKEIDVVSVPSKLTLIvhepkLKVDLTKyienhTFRFDYVFDESSSNETVYRSTVKPLVPHIFEGG 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 79 NGTIFAYGQTASGKTYTMMGS----EDHLGVIPRAIHDIFQKIKKFPDREFL-LRVSYMEIYNETITDLLcgtQKMKPLI 153
Cdd:cd01367 84 KATCFAYGQTGSGKTYTMGGDfsgqEESKGIYALAARDVFRLLNKLPYKDNLgVTVSFFEIYGGKVFDLL---NRKKRVR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 154 IREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKgepsNCEGSVkvshLNL 233
Cdd:cd01367 161 LREDGKGEVQVVGLTEKPVTSAEELLELIESGSSLRTTGQTSANSQSSRSHAILQIILRDRGT----NKLHGK----LSF 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 234 VDLAGSERAAQTGAAGV-RLKEGCNINRSLFILGQVIKKLSDGQVggFINYRDSKLTRILQNSL-GGNAKTRIICTITP- 310
Cdd:cd01367 233 VDLAGSERGADTSSADRqTRMEGAEINKSLLALKECIRALGQNKA--HIPFRGSKLTQVLKDSFiGENSKTCMIATISPg 310
|
330
....*....|....*...
gi 2462594594 311 -VSFDETLTALQFASTAK 327
Cdd:cd01367 311 aSSCEHTLNTLRYADRVK 328
|
|
| KISc_KID_like |
cd01376 |
Kinesin motor domain, KIF22/Kid-like subgroup; Kinesin motor domain, KIF22/Kid-like subgroup. ... |
7-327 |
4.48e-65 |
|
Kinesin motor domain, KIF22/Kid-like subgroup; Kinesin motor domain, KIF22/Kid-like subgroup. Members of this group might play a role in regulating chromosomal movement along microtubules in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276827 [Multi-domain] Cd Length: 319 Bit Score: 224.69 E-value: 4.48e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 7 VAVCVRVRPLNSREESLGETAQVYWkTDNNVIYQVDG-----SKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGT 81
Cdd:cd01376 2 VRVAVRVRPFVDGTAGASDPSCVSG-IDSCSVELADPrnhgeTLKYQFDAFYGEESTQEDIYAREVQPIVPHLLEGQNAT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 82 IFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPDREFLLrVSYMEIYNETITDLLcgTQKMKPLIIREDVNRN 161
Cdd:cd01376 81 VFAYGSTGAGKTFTMLGSPEQPGLMPLTVMDLLQMTRKEAWALSFT-MSYLEIYQEKILDLL--EPASKELVIREDKDGN 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 162 VYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREkgepSNCEGSVKVSHLNLVDLAGSER 241
Cdd:cd01376 158 ILIPGLSSKPIKSMAEFEEAFLPASKNRTVAATRLNDNSSRSHAVLLIKVDQRE----RLAPFRQRTGKLNLIDLAGSED 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 242 AAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQvgGFINYRDSKLTRILQNSLGGNAKTRIICTITP--VSFDETLTA 319
Cdd:cd01376 234 NRRTGNEGIRLKESGAINSSLFVLSKVVNALNKNL--PRIPYRDSKLTRLLQDSLGGGSRCIMVANIAPerTFYQDTLST 311
|
....*...
gi 2462594594 320 LQFASTAK 327
Cdd:cd01376 312 LNFAARSR 319
|
|
| PLN03188 |
PLN03188 |
kinesin-12 family protein; Provisional |
7-362 |
3.12e-63 |
|
kinesin-12 family protein; Provisional
Pssm-ID: 215621 [Multi-domain] Cd Length: 1320 Bit Score: 239.45 E-value: 3.12e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 7 VAVCVRVRPLNSREEslGETAQVYWKTDNNVIyqvdGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAYG 86
Cdd:PLN03188 100 VKVIVRMKPLNKGEE--GEMIVQKMSNDSLTI----NGQTFTFDSIADPESTQEDIFQLVGAPLVENCLAGFNSSVFAYG 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 87 QTASGKTYTMMG-----SEDHL-----GVIPRAIHDIFQKIK----KFPDRE--FLLRVSYMEIYNETITDLLCGTQKmk 150
Cdd:PLN03188 174 QTGSGKTYTMWGpanglLEEHLsgdqqGLTPRVFERLFARINeeqiKHADRQlkYQCRCSFLEIYNEQITDLLDPSQK-- 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 151 PLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEpSNCEGSVKVSH 230
Cdd:PLN03188 252 NLQIREDVKSGVYVENLTEEYVKTMKDVTQLLIKGLSNRRTGATSINAESSRSHSVFTCVVESRCKSV-ADGLSSFKTSR 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 231 LNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSD-GQVGG--FINYRDSKLTRILQNSLGGNAKTRIICT 307
Cdd:PLN03188 331 INLVDLAGSERQKLTGAAGDRLKEAGNINRSLSQLGNLINILAEiSQTGKqrHIPYRDSRLTFLLQESLGGNAKLAMVCA 410
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2462594594 308 ITPVSF--DETLTALQFASTAKYMKNTPYVNEVSTDEalLKRYRKEIMDLKKQLEEV 362
Cdd:PLN03188 411 ISPSQSckSETFSTLRFAQRAKAIKNKAVVNEVMQDD--VNFLREVIRQLRDELQRV 465
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
828-1647 |
6.55e-27 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 120.93 E-value: 6.55e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 828 DFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQE---RLNEMEQ----LKEQLENRD 900
Cdd:TIGR02168 236 ELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYAlanEISRLEQqkqiLRERLANLE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 901 STLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETI 980
Cdd:TIGR02168 316 RQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQI 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 981 NTLKSKISEEVSRNLHMEENtgetkdefQQKTIENQEEL--RLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVE 1058
Cdd:TIGR02168 396 ASLNNEIERLEARLERLEDR--------RERLQQEIEELlkKLEEAELKELQAELEELEEELEELQEELERLEEALEELR 467
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1059 EKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENL----KNELKNKE-------LTLEHMETER-----LELAQKLNE 1122
Cdd:TIGR02168 468 EELEEAEQALDAAERELAQLQARLDSLERLQENLEGFsegvKALLKNQSglsgilgVLSELISVDEgyeaaIEAALGGRL 547
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1123 NYEEVKSITKERKVLkELQKSFETERDHL----RGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQII 1198
Cdd:TIGR02168 548 QAVVVENLNAAKKAI-AFLKQNELGRVTFlpldSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVL 626
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1199 NTQDLEKShtklqeeipvLHEEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARiEMERLRLNEKFQESQEEIKS 1278
Cdd:TIGR02168 627 VVDDLDNA----------LELAKKLRPGYRIVTLDGDLVRPGGVITGGSAKTNSSILER-RREIEELEEKIEELEEKIAE 695
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1279 LTKERdnlktikEALEVKHDQLKEHIRETLAKIQESQskQEQSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGL 1358
Cdd:TIGR02168 696 LEKAL-------AELRKELEELEEELEQLRKELEELS--RQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEEL 766
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1359 SKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEElkvahccLKEQEETINELRVNLSEKETE 1438
Cdd:TIGR02168 767 EERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEE-------AANLRERLESLERRIAATERR 839
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1439 ISTIQKQLEAINDKLQNKIQEIYEKEEQFNiKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQ 1518
Cdd:TIGR02168 840 LEDLEEQIEELSEDIESLAAEIEELEELIE-ELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELE 918
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1519 IMIKEKEEMKRVQEALQIERDQLKENTKEivakmkesqekEYQFLKMTAVNETQEKMCEIEHLKEQfetqklnLENIETE 1598
Cdd:TIGR02168 919 ELREKLAQLELRLEGLEVRIDNLQERLSE-----------EYSLTLEEAEALENKIEDDEEEARRR-------LKRLENK 980
|
810 820 830 840
....*....|....*....|....*....|....*....|....*....
gi 2462594594 1599 NIRLTQILHENLEEMRSVTKERDDLRSVEETLkverDQLKENLRETITR 1647
Cdd:TIGR02168 981 IKELGPVNLAAIEEYEELKERYDFLTAQKEDL----TEAKETLEEAIEE 1025
|
|
| Motor_domain |
cd01363 |
Myosin and Kinesin motor domain; Myosin and Kinesin motor domain. These ATPases belong to the ... |
9-269 |
4.47e-24 |
|
Myosin and Kinesin motor domain; Myosin and Kinesin motor domain. These ATPases belong to the P-loop NTPase family and provide the driving force in myosin and kinesin mediated processes. Some of the names do not match with what is given in the sequence list. This is because they are based on the current nomenclature by Kollmar/Sebe-Pedros.
Pssm-ID: 276814 [Multi-domain] Cd Length: 170 Bit Score: 101.27 E-value: 4.47e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 9 VCVRVRPLNSREESlgetaqvywktdnnviyqvDGSKSFNFDRVFHGNETTKNVYEeIAAPIIDSAIQGYNG-TIFAYGQ 87
Cdd:cd01363 1 VLVRVNPFKELPIY-------------------RDSKIIVFYRGFRRSESQPHVFA-IADPAYQSMLDGYNNqSIFAYGE 60
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 88 TASGKTYTMMgsedhlGVIPRAIHDIFQKIKKfpdrefllrvsymeiynetitdllcgtqkmkpliiredvNRNVYVADL 167
Cdd:cd01363 61 SGAGKTETMK------GVIPYLASVAFNGINK---------------------------------------GETEGWVYL 95
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 168 TEEVVYTSEMALKWITKGEKSRHyGETKMNQRSSRSHTIFRMilesrekgepsncegsvkvshlnLVDLAGSERaaqtga 247
Cdd:cd01363 96 TEITVTLEDQILQANPILEAFGN-AKTTRNENSSRFGKFIEI-----------------------LLDIAGFEI------ 145
|
250 260
....*....|....*....|..
gi 2462594594 248 agvrlkegcnINRSLFILGQVI 269
Cdd:cd01363 146 ----------INESLNTLMNVL 157
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1264-2061 |
3.12e-23 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 108.99 E-value: 3.12e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1264 RLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQeqslnmkekdNETTKIVSEMEQfkp 1343
Cdd:TIGR02168 236 ELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKEL----------YALANEISRLEQ--- 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1344 kdsallRIEIemlgLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEE 1423
Cdd:TIGR02168 303 ------QKQI----LRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELES 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1424 TINELRVNLSEKETEISTIQKQLEAINdklqNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSAlqSIESKM 1503
Cdd:TIGR02168 373 RLEELEEQLETLRSKVAQLELQIASLN----NEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQA--ELEELE 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1504 LELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKE--NTKEIVAKMKESQEKEYQFLKmTAVNETQEKMCEIEHL 1581
Cdd:TIGR02168 447 EELEELQEELERLEEALEELREELEEAEQALDAAERELAQlqARLDSLERLQENLEGFSEGVK-ALLKNQSGLSGILGVL 525
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1582 KEQFETQK---LNLENIETEniRLTQILHENLEEMR----SVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEE 1654
Cdd:TIGR02168 526 SELISVDEgyeAAIEAALGG--RLQAVVVENLNAAKkaiaFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGV 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1655 LKIVHMHLKEHQETIDKLRG--IVSEKTNEISNMQKDLEHSN--------------------DALKAQDLKIQEELRIAH 1712
Cdd:TIGR02168 604 AKDLVKFDPKLRKALSYLLGgvLVVDDLDNALELAKKLRPGYrivtldgdlvrpggvitggsAKTNSSILERRREIEELE 683
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1713 MHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKdvnetqkkvsEMEQLKKQIKDQS 1792
Cdd:TIGR02168 684 EKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEA----------EVEQLEERIAQLS 753
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1793 LTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKAR-----------DLEIQQELKTA 1861
Cdd:TIGR02168 754 KELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAEltllneeaanlRERLESLERRI 833
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1862 RMLSKEHKETV---DKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQF 1938
Cdd:TIGR02168 834 AATERRLEDLEeqiEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSEL 913
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1939 EaqnlsmqsvrmdnfQLTKKLHESLEEIRIVakerdelrriKESLKMERDQFIATLREMIARDRQNHQVKPEKRLLS-DG 2017
Cdd:TIGR02168 914 R--------------RELEELREKLAQLELR----------LEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDeEE 969
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*
gi 2462594594 2018 QQHLTESLREKCSRI-----------KELLKRYSEMDDHYECLNRLSLDLEKEIE 2061
Cdd:TIGR02168 970 ARRRLKRLENKIKELgpvnlaaieeyEELKERYDFLTAQKEDLTEAKETLEEAIE 1024
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1014-1757 |
6.31e-21 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 101.29 E-value: 6.31e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1014 ENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIE 1093
Cdd:TIGR02168 222 LRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1094 N----LKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEEL 1169
Cdd:TIGR02168 302 QqkqiLRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQL 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1170 KIAHIHLKEHQETIDELRRSVSEKTAQIintQDLEKSHTKLQEEIPVLHEEQELlPNVKEVSETQETMNELELLTEQSTT 1249
Cdd:TIGR02168 382 ETLRSKVAQLELQIASLNNEIERLEARL---ERLEDRRERLQQEIEELLKKLEE-AELKELQAELEELEEELEELQEELE 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1250 KDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKE---------HIRETLAKIQESQSKQEQ 1320
Cdd:TIGR02168 458 RLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKAllknqsglsGILGVLSELISVDEGYEA 537
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1321 SLN----------MKEKDNETTKIVSEMEQ------------------FKPKDSALLRIEIEMLGLSKRLQESHDEMKSV 1372
Cdd:TIGR02168 538 AIEaalggrlqavVVENLNAAKKAIAFLKQnelgrvtflpldsikgteIQGNDREILKNIEGFLGVAKDLVKFDPKLRKA 617
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1373 AKEKDDLQRLQEVLQSESDQLKENIK---------EIVAKH--------------LETEEELKVAHCCLKEQEETINELR 1429
Cdd:TIGR02168 618 LSYLLGGVLVVDDLDNALELAKKLRPgyrivtldgDLVRPGgvitggsaktnssiLERRREIEELEEKIEELEEKIAELE 697
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1430 VNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEeqfniKQISEVQEKVNELKQFKEHRkakDSALQSIESKMLELTNR 1509
Cdd:TIGR02168 698 KALAELRKELEELEEELEQLRKELEELSRQISALR-----KDLARLEAEVEQLEERIAQL---SKELTELEAEIEELEER 769
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1510 LQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEK--EYQFLKMTAVNETQEKMCEIEHLKEQFET 1587
Cdd:TIGR02168 770 LEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEaaNLRERLESLERRIAATERRLEDLEEQIEE 849
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1588 QKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQE 1667
Cdd:TIGR02168 850 LSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLEL 929
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1668 TIDKLRGIVSEKTNEISNMQKDLEhsnDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGI----------VSEKTDKLS 1737
Cdd:TIGR02168 930 RLEGLEVRIDNLQERLSEEYSLTL---EEAEALENKIEDDEEEARRRLKRLENKIKELGPVnlaaieeyeeLKERYDFLT 1006
|
810 820
....*....|....*....|
gi 2462594594 1738 NMQKDLENSNAKLQEKIQEL 1757
Cdd:TIGR02168 1007 AQKEDLTEAKETLEEAIEEI 1026
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
828-1639 |
2.38e-20 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 99.37 E-value: 2.38e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 828 DFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTEL--SYKTQELQEKTREVQ--ERLNEMEQLKEQLENRDSTL 903
Cdd:TIGR02169 167 EFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRRERekAERYQALLKEKREYEgyELLKEKEALERQKEAIERQL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 904 QTVEREKTLITEKLQQTLEEVKTLTQEKDDL-KQLQESLQIERDQLKSDIHDTVNmnidTQEQLRNALESLKQHQETINT 982
Cdd:TIGR02169 247 ASLEEELEKLTEEISELEKRLEEIEQLLEELnKKIKDLGEEEQLRVKEKIGELEA----EIASLERSIAEKERELEDAEE 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 983 LKSKISEEVSRnlhmeenTGETKDEFQQKTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLK 1062
Cdd:TIGR02169 323 RLAKLEAEIDK-------LLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLE 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1063 EKSQQLQEKQQQLLNVQEemsEMQKKINEIENLKNELKNKELTLEHMETERLELAqklnenyEEVKSITKERKVLKELQK 1142
Cdd:TIGR02169 396 KLKREINELKRELDRLQE---ELQRLSEELADLNAAIAGIEAKINELEEEKEDKA-------LEIKKQEWKLEQLAADLS 465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1143 SFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQI------------------------- 1197
Cdd:TIGR02169 466 KYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIqgvhgtvaqlgsvgeryataievaa 545
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1198 --------INTQDLEKSHTKL--------------------QEEIPVLHE-------------EQELLPNVKEVSETQET 1236
Cdd:TIGR02169 546 gnrlnnvvVEDDAVAKEAIELlkrrkagratflplnkmrdeRRDLSILSEdgvigfavdlvefDPKYEPAFKYVFGDTLV 625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1237 MNELELLTEQ------------------STTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHD 1298
Cdd:TIGR02169 626 VEDIEAARRLmgkyrmvtlegelfeksgAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLD 705
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1299 QLKEHIRETLAKIQESQSKQEQSLNMKEKDNEttkivsEMEQFKPKDSAllrieiemlgLSKRLQESHDEMKSVAKEKDD 1378
Cdd:TIGR02169 706 ELSQELSDASRKIGEIEKEIEQLEQEEEKLKE------RLEELEEDLSS----------LEQEIENVKSELKELEARIEE 769
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1379 LQRlqevlqsESDQLKENIKEIVAKHLETEEELKVAHccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQ 1458
Cdd:TIGR02169 770 LEE-------DLHKLEEALNDLEARLSHSRIPEIQAE--LSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQE 840
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1459 EIYEKEEqfnikQISEVQEKVNELKQFKEhrkAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIER 1538
Cdd:TIGR02169 841 QRIDLKE-----QIKSIEKEIENLNGKKE---ELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQI 912
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1539 DQLKENTKEIVAKM--KESQEKEYQFLKMTAVNETQEKMCEiehlkeqfETQKLNLENIETENIRLTQILHENLEEMRSV 1616
Cdd:TIGR02169 913 EKKRKRLSELKAKLeaLEEELSEIEDPKGEDEEIPEEELSL--------EDVQAELQRVEEEIRALEPVNMLAIQEYEEV 984
|
890 900
....*....|....*....|...
gi 2462594594 1617 TKERDDLRSVEETLKVERDQLKE 1639
Cdd:TIGR02169 985 LKRLDELKEKRAKLEEERKAILE 1007
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
496-1399 |
9.58e-20 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 97.43 E-value: 9.58e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 496 IESELNSLRADYdnLVLDYEQLRTEKEEMELKLKEKNDldEFEALERKTkkdQEMQLIHEISNLKNLVKHAEVynQDLEN 575
Cdd:TIGR02168 218 LKAELRELELAL--LVLRLEELREELEELQEELKEAEE--ELEELTAEL---QELEEKLEELRLEVSELEEEI--EELQK 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 576 ELSSKVELLREKEDQIKKLQEyidsqKLENIKMDLSYSLESIEDPKQMKQTLfDAETVALDAKRESafLRSENLELKEKM 655
Cdd:TIGR02168 289 ELYALANEISRLEQQKQILRE-----RLANLERQLEELEAQLEELESKLDEL-AEELAELEEKLEE--LKEELESLEAEL 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 656 KELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITkltslidgkvpkdllcnlELEGKITDLQKELNKEVEE 735
Cdd:TIGR02168 361 EELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIE------------------RLEARLERLEDRRERLQQE 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 736 NEALREEvILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLleeigktKDDLATTQSNYKST 815
Cdd:TIGR02168 423 IEELLKK-LEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAA-------ERELAQLQARLDSL 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 816 DQEFQNFktlhMDFEQKYKMVLEENERMNQeIVNLSKEAQKFDSSLG-ALKTELSYKTQELQEKTREVQERlnEMEQLKE 894
Cdd:TIGR02168 495 ERLQENL----EGFSEGVKALLKNQSGLSG-ILGVLSELISVDEGYEaAIEAALGGRLQAVVVENLNAAKK--AIAFLKQ 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 895 QLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTvnmnidtqEQLRNALESLK 974
Cdd:TIGR02168 568 NELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVV--------DDLDNALELAK 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 975 Q--HQETINTLKSKIseeVSRNLHMeenTGETkDEFQQKTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCD 1052
Cdd:TIGR02168 640 KlrPGYRIVTLDGDL---VRPGGVI---TGGS-AKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEE 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1053 RLAEVEEKLKEKSQQlqekqqqllnVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITK 1132
Cdd:TIGR02168 713 ELEQLRKELEELSRQ----------ISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEA 782
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1133 ERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQD----LEKSHT 1208
Cdd:TIGR02168 783 EIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEdiesLAAEIE 862
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1209 KLQEEIPVLHEEQELLpnVKEVSETQETMNELELLTEQSttkdSTTLARIEMERLRLNEKFQESQEEIKSltkerdnLKT 1288
Cdd:TIGR02168 863 ELEELIEELESELEAL--LNERASLEEALALLRSELEEL----SEELRELESKRSELRRELEELREKLAQ-------LEL 929
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1289 IKEALEVKHDQLKEHIREtlakiQESQSKQEQSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDE 1368
Cdd:TIGR02168 930 RLEGLEVRIDNLQERLSE-----EYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDF 1004
|
890 900 910
....*....|....*....|....*....|.
gi 2462594594 1369 MKsvaKEKDDLQRLQEVLQSESDQLKENIKE 1399
Cdd:TIGR02168 1005 LT---AQKEDLTEAKETLEEAIEEIDREARE 1032
|
|
| Microtub_bd |
pfam16796 |
Microtubule binding; This motor homology domain binds microtubules and lacks an ATP-binding ... |
19-143 |
1.17e-19 |
|
Microtubule binding; This motor homology domain binds microtubules and lacks an ATP-binding site.
Pssm-ID: 465274 [Multi-domain] Cd Length: 144 Bit Score: 87.66 E-value: 1.17e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 19 REESLGETAQVYWKTDNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIAApIIDSAIQGYNGTIFAYGQTASGKTYTMmg 98
Cdd:pfam16796 29 RPELLSEAQIDYPDETSSDGKIGSKNKSFSFDRVFPPESEQEDVFQEISQ-LVQSCLDGYNVCIFAYGQTGSGSNDGM-- 105
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 2462594594 99 sedhlgvIPRAIHDIFQKIKKF-PDREFLLRVSYMEIYNETITDLL 143
Cdd:pfam16796 106 -------IPRAREQIFRFISSLkKGWKYTIELQFVEIYNESSQDLL 144
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1095-1861 |
4.10e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 95.12 E-value: 4.10e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1095 LKNELKNKELTL-----EHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEEL 1169
Cdd:TIGR02168 218 LKAELRELELALlvlrlEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEI 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1170 KIAHIHLKEHQETIDELRRSVSEKTAQIINTQ----DLEKSHTKLQEEIPVLHEEQELLPNvkEVSETQETMNELEllte 1245
Cdd:TIGR02168 298 SRLEQQKQILRERLANLERQLEELEAQLEELEskldELAEELAELEEKLEELKEELESLEA--ELEELEAELEELE---- 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1246 qsttkdsTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQsKQEQSLNMK 1325
Cdd:TIGR02168 372 -------SRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAE-LKELQAELE 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1326 EKDNETTKIVSEMEQFKpkdSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKE------ 1399
Cdd:TIGR02168 444 ELEEELEELQEELERLE---EALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNqsglsg 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1400 ---IVAKHLETEEELKVA---------HCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQF 1467
Cdd:TIGR02168 521 ilgVLSELISVDEGYEAAieaalggrlQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGF 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1468 NIKQISEVQEK----------------VNELKQFKEHRKAKDSALQSI--------------------ESKMLELTNRLQ 1511
Cdd:TIGR02168 601 LGVAKDLVKFDpklrkalsyllggvlvVDDLDNALELAKKLRPGYRIVtldgdlvrpggvitggsaktNSSILERRREIE 680
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1512 ESQEEIQIMIKEKEEMKRVQEALQIERDQLKEntkEIVAKMKESQEKEYQFLKMTAVNETQEKmcEIEHLKEQFETQKLN 1591
Cdd:TIGR02168 681 ELEEKIEELEEKIAELEKALAELRKELEELEE---ELEQLRKELEELSRQISALRKDLARLEA--EVEQLEERIAQLSKE 755
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1592 LENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKE----------NLRETITRDLEKQEELKIVH-- 1659
Cdd:TIGR02168 756 LTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREaldelraeltLLNEEAANLRERLESLERRIaa 835
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1660 --MHLKEHQETIDKLRGIVSEKTNEISNMQKDLEHSNDALKA---QDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTD 1734
Cdd:TIGR02168 836 teRRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEAllnERASLEEALALLRSELEELSEELRELESKRSELRR 915
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1735 KLSNMQKDLENSNAKLQE---KIQEL--KANEHQLITLKKDVNETQKKVSEMEQLKKQIKdqSLTLSKLEIENLNLAQkl 1809
Cdd:TIGR02168 916 ELEELREKLAQLELRLEGlevRIDNLqeRLSEEYSLTLEEAEALENKIEDDEEEARRRLK--RLENKIKELGPVNLAA-- 991
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|..
gi 2462594594 1810 henLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETkarDLEIQQELKTA 1861
Cdd:TIGR02168 992 ---IEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEI---DREARERFKDT 1037
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1122-2007 |
9.48e-19 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 93.98 E-value: 9.48e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1122 ENYEEVKSITKErkVLKELQKsFETERDHLRGYireieaTGLQTKEELKIAHIHLKEhqetIDELRRSVSEKTAQIintQ 1201
Cdd:TIGR02169 184 ENIERLDLIIDE--KRQQLER-LRREREKAERY------QALLKEKREYEGYELLKE----KEALERQKEAIERQL---A 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1202 DLEKSHTKLQEEIPVLHEE-QELLPNVKEVSETQETMNELELLTEQsttkdsTTLARIEMERLRLNEKFQESQEEIKSLT 1280
Cdd:TIGR02169 248 SLEEELEKLTEEISELEKRlEEIEQLLEELNKKIKDLGEEEQLRVK------EKIGELEAEIASLERSIAEKERELEDAE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1281 KERDNLKTIKEALEVKHDQLKEHIRETlaKIQESQSKQEqslnMKEKDNETTKIVSEMEQfkpKDSALLRIEIEMLGLSK 1360
Cdd:TIGR02169 322 ERLAKLEAEIDKLLAEIEELEREIEEE--RKRRDKLTEE----YAELKEELEDLRAELEE---VDKEFAETRDELKDYRE 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1361 RLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEIS 1440
Cdd:TIGR02169 393 KLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELY 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1441 TIQKQLEAINDKLQNKIQEIYEKEEQfnikqiseVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQ-- 1518
Cdd:TIGR02169 473 DLKEEYDRVEKELSKLQRELAEAEAQ--------ARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAIEva 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1519 -------IMIKEKEEMKRVQEALQieRDQLKENTKEIVAKMKeSQEKEYQFLKMTAVNETQEKMCEIEhlkEQFET---- 1587
Cdd:TIGR02169 545 agnrlnnVVVEDDAVAKEAIELLK--RRKAGRATFLPLNKMR-DERRDLSILSEDGVIGFAVDLVEFD---PKYEPafky 618
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1588 ---QKLNLENIETE-----NIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKEnlretITRDLEKQE-ELKIV 1658
Cdd:TIGR02169 619 vfgDTLVVEDIEAArrlmgKYRMVTLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQR-----LRERLEGLKrELSSL 693
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1659 HMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEHSND---ALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDK 1735
Cdd:TIGR02169 694 QSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQeeeKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEED 773
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1736 LSNMQKDLENSNAKL-QEKIQELKAnehQLITLKKDVNETQKKVSEMEQlkkqikdqslTLSKLEIENLNLAQKLHENLE 1814
Cdd:TIGR02169 774 LHKLEEALNDLEARLsHSRIPEIQA---ELSKLEEEVSRIEARLREIEQ----------KLNRLTLEKEYLEKEIQELQE 840
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1815 EMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQIsDIQKDLD 1894
Cdd:TIGR02169 841 QRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQI-EKKRKRL 919
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1895 KskdELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEAQNLSMQSVRMDNFQltkklheSLEEIRIVAKERD 1974
Cdd:TIGR02169 920 S---ELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNML-------AIQEYEEVLKRLD 989
|
890 900 910
....*....|....*....|....*....|....
gi 2462594594 1975 ELRRIKESLKMERDQfiatLREMIAR-DRQNHQV 2007
Cdd:TIGR02169 990 ELKEKRAKLEEERKA----ILERIEEyEKKKREV 1019
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
715-1554 |
4.95e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 91.66 E-value: 4.95e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 715 NLELEGKITDLQKELNKEVEENEALreevILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGL 794
Cdd:TIGR02168 204 SLERQAEKAERYKELKAELRELELA----LLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSEL 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 795 LEEIGKTkddlattqsnykstDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELS---YK 871
Cdd:TIGR02168 280 EEEIEEL--------------QKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAeleEK 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 872 TQELQEKTREVQERLNEMEQLKEQLENRDSTLQT-VEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKS 950
Cdd:TIGR02168 346 LEELKEELESLEAELEELEAELEELESRLEELEEqLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEE 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 951 DIHDTVNMNIDTQ----EQLRNALESLKQHQETINTLKSKISEEVSRNlhmEENTGETKDEFQQKTIEnQEELRLLGDEL 1026
Cdd:TIGR02168 426 LLKKLEEAELKELqaelEELEEELEELQEELERLEEALEELREELEEA---EQALDAAERELAQLQAR-LDSLERLQENL 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1027 KKQQEIVAQEKNHAIKKEGELSRTCDRLaEVEEKLkEKSQQLQEKQQQLLNVqeeMSEMQKKINEIENLKNELKNK---- 1102
Cdd:TIGR02168 502 EGFSEGVKALLKNQSGLSGILGVLSELI-SVDEGY-EAAIEAALGGRLQAVV---VENLNAAKKAIAFLKQNELGRvtfl 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1103 ELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQET 1182
Cdd:TIGR02168 577 PLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLRPGYRIVTLDGDLVR 656
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1183 IDELRRSVSEKTAQiiNTQDLEKSHTKLQEEIPVLHEE-QELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEME 1261
Cdd:TIGR02168 657 PGGVITGGSAKTNS--SILERRREIEELEEKIEELEEKiAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKD 734
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1262 RLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQ- 1340
Cdd:TIGR02168 735 LARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTl 814
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1341 ----FKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHC 1416
Cdd:TIGR02168 815 lneeAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRS 894
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1417 CLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEkvnelkqFKEHRKAKDSAL 1496
Cdd:TIGR02168 895 ELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEE-------AEALENKIEDDE 967
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462594594 1497 QSIESKMLELTNRLQE-------SQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKE 1554
Cdd:TIGR02168 968 EEARRRLKRLENKIKElgpvnlaAIEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEIDREARE 1032
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
656-1400 |
1.98e-17 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 89.74 E-value: 1.98e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 656 KELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGkvpkdllCNLELEGKITDLQKELNKEVEE 735
Cdd:TIGR02169 226 YELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEE-------LNKKIKDLGEEEQLRVKEKIGE 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 736 NEALREEviLLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKST 815
Cdd:TIGR02169 299 LEAEIAS--LERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEV 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 816 DQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQ 895
Cdd:TIGR02169 377 DKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWK 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 896 LENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIE-------RDQLKSDI---HDTVNMNIDTQEQ 965
Cdd:TIGR02169 457 LEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERvrggravEEVLKASIqgvHGTVAQLGSVGER 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 966 LRNALES-----------------------LKQHQETINTL----KSKISEEVSRNLHMEENTGETKD--EFQQK----- 1011
Cdd:TIGR02169 537 YATAIEVaagnrlnnvvveddavakeaielLKRRKAGRATFlplnKMRDERRDLSILSEDGVIGFAVDlvEFDPKyepaf 616
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1012 --------TIENQEELR----------LLGDELKKQQEIV------AQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQ 1067
Cdd:TIGR02169 617 kyvfgdtlVVEDIEAARrlmgkyrmvtLEGELFEKSGAMTggsrapRGGILFSRSEPAELQRLRERLEGLKRELSSLQSE 696
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1068 LQEKQQQLLNVQEEMSEMQKKINEIENlknelknkeltlehmetERLELAQKLNENYEEVKSITKERKVLKELQKSFETE 1147
Cdd:TIGR02169 697 LRRIENRLDELSQELSDASRKIGEIEK-----------------EIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSE 759
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1148 RDHLRGYIREIEATGLQTKEEL-----KIAHIHLKEHQETIDELRRSVSEKTAQIintQDLEKSHTKLQEEIPVLHEEQE 1222
Cdd:TIGR02169 760 LKELEARIEELEEDLHKLEEALndleaRLSHSRIPEIQAELSKLEEEVSRIEARL---REIEQKLNRLTLEKEYLEKEIQ 836
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1223 LLPNVKEVSETQETMN--ELELLTEQSTTKDStTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQL 1300
Cdd:TIGR02169 837 ELQEQRIDLKEQIKSIekEIENLNGKKEELEE-ELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKK 915
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1301 KEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKPKdsaLLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQ 1380
Cdd:TIGR02169 916 RKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAE---LQRVEEEIRALEPVNMLAIQEYEEVLKRLDELK 992
|
810 820
....*....|....*....|
gi 2462594594 1381 RLQEVLQSESDQLKENIKEI 1400
Cdd:TIGR02169 993 EKRAKLEEERKAILERIEEY 1012
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
997-1860 |
6.02e-17 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 88.25 E-value: 6.02e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 997 MEENTGETKDefQQKTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGE-LSRTCDRLAEVEEKLKEKSQQLQEKQQQL 1075
Cdd:pfam15921 80 LEEYSHQVKD--LQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDaMADIRRRESQSQEDLRNQLQNTVHELEAA 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1076 LNVQEEMseMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSI---------TKERKVLKELqksfET 1146
Cdd:pfam15921 158 KCLKEDM--LEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMstmhfrslgSAISKILREL----DT 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1147 ERDHLRGYIREIE--ATGLQTKEELKIaHIHLKEHQETIDELrrsVSEKTAQIINTQDLEKSH----TKLQEEIPVLHEE 1220
Cdd:pfam15921 232 EISYLKGRIFPVEdqLEALKSESQNKI-ELLLQQHQDRIEQL---ISEHEVEITGLTEKASSArsqaNSIQSQLEIIQEQ 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1221 --QELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKtikealevkhD 1298
Cdd:pfam15921 308 arNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLD----------D 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1299 QLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEME-QFKPKDSALLRIEIEMLGLSKRLQ-ESHDEMKSVAKEK 1376
Cdd:pfam15921 378 QLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRrELDDRNMEVQRLEALLKAMKSECQgQMERQMAAIQGKN 457
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1377 DDLQRLQEvLQSESDQLKENIKEIVakhleteEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNK 1456
Cdd:pfam15921 458 ESLEKVSS-LTAQLESTKEMLRKVV-------EELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLK 529
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1457 IQEIyekeeqfnikqisevqekvNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQI 1536
Cdd:pfam15921 530 LQEL-------------------QHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQV 590
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1537 ERDQLKentKEIVAKMKESQekEYQFLKmtavNETQEKMCEIEHLKEQFETQKLNLENIETENIR-LTQILHENLEEMRS 1615
Cdd:pfam15921 591 EKAQLE---KEINDRRLELQ--EFKILK----DKKDAKIRELEARVSDLELEKVKLVNAGSERLRaVKDIKQERDQLLNE 661
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1616 VTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEHSND 1695
Cdd:pfam15921 662 VKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRG 741
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1696 ALKAQDLKIQ---EELRIAHMH---LKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELkanEHQLITLKK 1769
Cdd:pfam15921 742 QIDALQSKIQfleEAMTNANKEkhfLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANM---EVALDKASL 818
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1770 DVNETQKKVSEMEQLKKQIKDQ-SLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKL--ERDQLKESLQE 1846
Cdd:pfam15921 819 QFAECQDIIQRQEQESVRLKLQhTLDVKELQGPGYTSNSSMKPRLLQPASFTRTHSNVPSSQSTASFlsHHSRKTNALKE 898
|
890
....*....|....*
gi 2462594594 1847 TKARDL-EIQQELKT 1860
Cdd:pfam15921 899 DPTRDLkQLLQELRS 913
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1052-1847 |
8.55e-17 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 87.82 E-value: 8.55e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1052 DRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNE----LKNKELTLEHMETERLELAQKLNENYEEV 1127
Cdd:TIGR02169 160 DEIAGVAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRRErekaERYQALLKEKREYEGYELLKEKEALERQK 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1128 KSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKiahihlKEHQETIDELRRSVSEKTAQIINTQDLEKSH 1207
Cdd:TIGR02169 240 EAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIK------DLGEEEQLRVKEKIGELEAEIASLERSIAEK 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1208 TKLQEEIpvlheEQELLPNVKEVSETQETMNELE-LLTEQSTTKDSTTlARIEMERLRLNEKFQESQEEIKSLTKERDNL 1286
Cdd:TIGR02169 314 ERELEDA-----EERLAKLEAEIDKLLAEIEELErEIEEERKRRDKLT-EEYAELKEELEDLRAELEEVDKEFAETRDEL 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1287 KTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKdnettkivsemeqFKPKDSALLRIEIEMLGLSKRLQESH 1366
Cdd:TIGR02169 388 KDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAA-------------IAGIEAKINELEEEKEDKALEIKKQE 454
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1367 DEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIvakhletEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQL 1446
Cdd:TIGR02169 455 WKLEQLAADLSKYEQELYDLKEEYDRVEKELSKL-------QRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTV 527
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1447 E-----------AINDKLQNKIQEIYEKEEQFNIKQISEVQEK---------VNELKQF--------------------- 1485
Cdd:TIGR02169 528 AqlgsvgeryatAIEVAAGNRLNNVVVEDDAVAKEAIELLKRRkagratflpLNKMRDErrdlsilsedgvigfavdlve 607
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1486 --KEHRKAKDSALQS--------------IESKMLELTNRLQES---------------------QEEIQIMIKEKEEMK 1528
Cdd:TIGR02169 608 fdPKYEPAFKYVFGDtlvvedieaarrlmGKYRMVTLEGELFEKsgamtggsraprggilfsrsePAELQRLRERLEGLK 687
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1529 RVQEALQIERDQLKENTKEIVAKMKESQEKeyqflkmtavneTQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHE 1608
Cdd:TIGR02169 688 RELSSLQSELRRIENRLDELSQELSDASRK------------IGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIEN 755
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1609 NLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRdlEKQEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQK 1688
Cdd:TIGR02169 756 VKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIP--EIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEK 833
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1689 ---DLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKL---QEKIQELKAN-- 1760
Cdd:TIGR02169 834 eiqELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLrelERKIEELEAQie 913
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1761 --EHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLaQKLHENL-----------EEMKSVMKERDNLR 1827
Cdd:TIGR02169 914 kkRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAEL-QRVEEEIralepvnmlaiQEYEEVLKRLDELK 992
|
890 900
....*....|....*....|
gi 2462594594 1828 RVEETLKLERDQLKESLQET 1847
Cdd:TIGR02169 993 EKRAKLEEERKAILERIEEY 1012
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
870-1484 |
1.79e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 86.53 E-value: 1.79e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 870 YKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLK 949
Cdd:COG1196 215 YRELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELL 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 950 SDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEvsrnlhmeentgetkdefqqktienQEELRLLGDELKKQ 1029
Cdd:COG1196 295 AELARLEQDIARLEERRRELEERLEELEEELAELEEELEEL-------------------------EEELEELEEELEEA 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1030 QEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKsqqlqekqqqLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHM 1109
Cdd:COG1196 350 EEELEEAEAELAEAEEALLEAEAELAEAEEELEEL----------AEELLEALRAAAELAAQLEELEEAEEALLERLERL 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1110 ETERLELAQKLNEnyeevksitkERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAhihlKEHQETIDELRRS 1189
Cdd:COG1196 420 EEELEELEEALAE----------LEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEA----ALLEAALAELLEE 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1190 VSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEqsttkdsTTLARIEMERLRLNEkf 1269
Cdd:COG1196 486 LAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALE-------AALAAALQNIVVEDD-- 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1270 QESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSlnmKEKDNETTKIVSEMEQFKPKDSALL 1349
Cdd:COG1196 557 EVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDL---READARYYVLGDTLLGRTLVAARLE 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1350 RIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELR 1429
Cdd:COG1196 634 AALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAE 713
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462594594 1430 VNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQ------ISEVQEKVNELKQ 1484
Cdd:COG1196 714 EERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEElpeppdLEELERELERLER 774
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
832-1384 |
6.44e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 81.52 E-value: 6.44e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 832 KYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKT 911
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRR 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 912 LITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEV 991
Cdd:COG1196 313 ELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEAL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 992 SRNLhmeentgetkdEFQQKTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEK 1071
Cdd:COG1196 393 RAAA-----------ELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEAL 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1072 QQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERD-- 1149
Cdd:COG1196 462 LELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAAle 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1150 -----HLRGYIREIEATGLQTKEELKIAhihlKEHQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQELL 1224
Cdd:COG1196 542 aalaaALQNIVVEDDEVAAAAIEYLKAA----KAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYV 617
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1225 PNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHI 1304
Cdd:COG1196 618 LGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEE 697
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1305 RETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQfkpKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQE 1384
Cdd:COG1196 698 ALLAEEEEERELAEAEEERLEEELEEEALEEQLEAE---REELLEELLEEEELLEEEALEELPEPPDLEELERELERLER 774
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1291-1908 |
7.94e-15 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 80.88 E-value: 7.94e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1291 EALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQ-FKPKDSALLRIEIEMLGLSKRLQEshdeM 1369
Cdd:PRK03918 158 DDYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLReINEISSELPELREELEKLEKEVKE----L 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1370 KSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVahccLKEQEETINELRvnlsEKETEISTIQKQLEAI 1449
Cdd:PRK03918 234 EELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEE----LEEKVKELKELK----EKAEEYIKLSEFYEEY 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1450 NDKLQN--KIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKakdsalqsieskmleltnRLQESQEEIQIMIKEKEEM 1527
Cdd:PRK03918 306 LDELREieKRLSRLEEEINGIEERIKELEEKEERLEELKKKLK------------------ELEKRLEELEERHELYEEA 367
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1528 KRVQEALQIERDQLKENTKEIVAKMKESQEKEyqflKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIR------ 1601
Cdd:PRK03918 368 KAKKEELERLKKRLTGLTPEKLEKELEELEKA----KEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKcpvcgr 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1602 -LTQilHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLREtITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEKT 1680
Cdd:PRK03918 444 eLTE--EHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRE-LEKVLKKESELIKLKELAEQLKELEEKLKKYNLEEL 520
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1681 NEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKAN 1760
Cdd:PRK03918 521 EKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPF 600
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1761 EHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEienlNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQL 1840
Cdd:PRK03918 601 YNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETE----KRLEELRKELEELEKKYSEEEYEELREEYLELSRELA 676
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462594594 1841 KeslqetkardleIQQELKTARMLSKEHKETVDKLR---EKISEKTIQISDIQKDLDKSKdELQKKIQELQ 1908
Cdd:PRK03918 677 G------------LRAELEELEKRREEIKKTLEKLKeelEEREKAKKELEKLEKALERVE-ELREKVKKYK 734
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
512-1197 |
4.53e-14 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 78.57 E-value: 4.53e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 512 LDYEQLRTEKEEMELKLKekndLDEFEALERktkkdQEMQLIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQI 591
Cdd:TIGR02169 211 ERYQALLKEKREYEGYEL----LKEKEALER-----QKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKI 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 592 KKL--QEYIDSQ-KLENIKMDLSySLESIEDPKQMKQTLFDAETVALDAKRESAFLRSENLE------------LKEKMK 656
Cdd:TIGR02169 282 KDLgeEEQLRVKeKIGELEAEIA-SLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEreieeerkrrdkLTEEYA 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 657 ELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCN---LELEGKITDLQKELNKEV 733
Cdd:TIGR02169 361 ELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSeelADLNAAIAGIEAKINELE 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 734 EENEALREEVILLS-ELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQ-------------------- 792
Cdd:TIGR02169 441 EEKEDKALEIKKQEwKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARaseervrggraveevlkasi 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 793 ----GLLEEIGKTK--------------------DDLATTQS-------------------------------------- 810
Cdd:TIGR02169 521 qgvhGTVAQLGSVGeryataievaagnrlnnvvvEDDAVAKEaiellkrrkagratflplnkmrderrdlsilsedgvig 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 811 ---NYKSTDQEFQN-FK-----TLHM-DFEQ------KYKMVLEENE----------------RMNQEIVNLSKEAQKFD 858
Cdd:TIGR02169 601 favDLVEFDPKYEPaFKyvfgdTLVVeDIEAarrlmgKYRMVTLEGElfeksgamtggsraprGGILFSRSEPAELQRLR 680
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 859 SSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQ 938
Cdd:TIGR02169 681 ERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSEL 760
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 939 ESLQIERDQLKSDIHdtvnmnidtqeQLRNALESLKQHQ-----ETINTLKSKISEEVSRNlhmEENTGETKDEFQQKTI 1013
Cdd:TIGR02169 761 KELEARIEELEEDLH-----------KLEEALNDLEARLshsriPEIQAELSKLEEEVSRI---EARLREIEQKLNRLTL 826
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1014 ENQEELRLLGDELKKQQEIVAQEKnhAIKKEGELSRTcdRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIE 1093
Cdd:TIGR02169 827 EKEYLEKEIQELQEQRIDLKEQIK--SIEKEIENLNG--KKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELE 902
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1094 NLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATG------LQTKE 1167
Cdd:TIGR02169 903 RKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEpvnmlaIQEYE 982
|
810 820 830
....*....|....*....|....*....|
gi 2462594594 1168 ELKIAHIHLKEHQETIDELRRSVSEKTAQI 1197
Cdd:TIGR02169 983 EVLKRLDELKEKRAKLEEERKAILERIEEY 1012
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
645-1212 |
2.54e-13 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 76.26 E-value: 2.54e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 645 RSENLE--LKEKMKELATTYKQMeNDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIdGKVPKDLLcnlELEGKI 722
Cdd:PRK03918 187 RTENIEelIKEKEKELEEVLREI-NEISSELPELREELEKLEKEVKELEELKEEIEELEKEL-ESLEGSKR---KLEEKI 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 723 TDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVvhkeSRVQGLLEEIGKTK 802
Cdd:PRK03918 262 RELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEI----NGIEERIKELEEKE 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 803 DDLATTQSNYKSTDQEFQNFKTLHMDFEqKYKMVLEENERMNQEIVNLSKEaqkfdsSLGALKTELSYKTQELQEKTREV 882
Cdd:PRK03918 338 ERLEELKKKLKELEKRLEELEERHELYE-EAKAKKEELERLKKRLTGLTPE------KLEKELEELEKAKEEIEEEISKI 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 883 QERLNEMEQLKEQLENRDSTLQTVERE----KTLITEKLQQTLEEVKTLtQEKDDLKQLQESLQIERDQLKSDIHdtVNM 958
Cdd:PRK03918 411 TARIGELKKEIKELKKAIEELKKAKGKcpvcGRELTEEHRKELLEEYTA-ELKRIEKELKEIEEKERKLRKELRE--LEK 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 959 NIDTQEQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGEtkdefqqKTIENQEELRLLGDELKKQQEIvaqeKN 1038
Cdd:PRK03918 488 VLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKE-------KLIKLKGEIKSLKKELEKLEEL----KK 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1039 HAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKqqqllnVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQ 1118
Cdd:PRK03918 557 KLAELEKKLDELEEELAELLKELEELGFESVEE------LEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDK 630
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1119 KLNENYEEVKSITKERKVLKELQKSF-ETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQI 1197
Cdd:PRK03918 631 AFEELAETEKRLEELRKELEELEKKYsEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAK 710
|
570
....*....|....*
gi 2462594594 1198 INTQDLEKSHTKLQE 1212
Cdd:PRK03918 711 KELEKLEKALERVEE 725
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
677-1564 |
3.41e-13 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 75.78 E-value: 3.41e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 677 EAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELegkitdlqKELNKEVEENEALREEVILLSELKSLPSEV 756
Cdd:pfam02463 174 ALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQL--------KEKLELEEEYLLYLDYLKLNEERIDLLQEL 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 757 ERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDqefqnfktlhmdfEQKYKMV 836
Cdd:pfam02463 246 LRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKL-------------ERRKVDD 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 837 LEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEK 916
Cdd:pfam02463 313 EEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKL 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 917 LQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEVSRNLH 996
Cdd:pfam02463 393 KEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSED 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 997 MEENTGETKDEFQQKTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLL 1076
Cdd:pfam02463 473 LLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVE 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1077 NVQEEMSEMQKKINE-IENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETerdHLRGYI 1155
Cdd:pfam02463 553 VSATADEVEERQKLVrALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAK---VVEGIL 629
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1156 REIEATGLQTKEELKIAhihlkEHQETIDELRRSVSEKTAQIINTQDlekshTKLQEEIPVLHEEQELLPNVKEVSETQE 1235
Cdd:pfam02463 630 KDTELTKLKESAKAKES-----GLRKGVSLEEGLAEKSEVKASLSEL-----TKELLEIQELQEKAESELAKEEILRRQL 699
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1236 TMNELELLTEQSTTKDSttlariEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQ 1315
Cdd:pfam02463 700 EIKKKEQREKEELKKLK------LEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKE 773
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1316 SKQEQSLNMKEKDnettKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKS--VAKEKDDLQRLQEVLQSESDQL 1393
Cdd:pfam02463 774 KELAEEREKTEKL----KVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEqeEKIKEEELEELALELKEEQKLE 849
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1394 KENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQIS 1473
Cdd:pfam02463 850 KLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEI 929
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1474 EVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMK 1553
Cdd:pfam02463 930 LLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIR 1009
|
890
....*....|.
gi 2462594594 1554 ESQEKEYQFLK 1564
Cdd:pfam02463 1010 AIIEETCQRLK 1020
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1267-1861 |
3.71e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 75.74 E-value: 3.71e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1267 EKFQESQEEIK-----SLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQslnmkekdnETTKIVSEMEQF 1341
Cdd:COG1196 213 ERYRELKEELKeleaeLLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEE---------LRLELEELELEL 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1342 KPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQ 1421
Cdd:COG1196 284 EEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEA 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1422 EETINELRVNLSEKETEISTIQKQLEAINDK---LQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQS 1498
Cdd:COG1196 364 EEALLEAEAELAEAEEELEELAEELLEALRAaaeLAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEA 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1499 IESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQL--KENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMC 1576
Cdd:COG1196 444 LEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELaeAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLA 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1577 E--------------------------------------IEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTK 1618
Cdd:COG1196 524 GavavligveaayeaaleaalaaalqnivveddevaaaaIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDL 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1619 ERDDLRSVEETLKVERDQLKENLRETITRDLEK------QEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEH 1692
Cdd:COG1196 604 VASDLREADARYYVLGDTLLGRTLVAARLEAALrravtlAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEE 683
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1693 SNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVN 1772
Cdd:COG1196 684 LAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLE 763
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1773 ETQKKVsemEQLKKQIKdqsltlsklEIENLNLAQklhenLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETkarDL 1852
Cdd:COG1196 764 ELEREL---ERLEREIE---------ALGPVNLLA-----IEEYEELEERYDFLSEQREDLEEARETLEEAIEEI---DR 823
|
....*....
gi 2462594594 1853 EIQQELKTA 1861
Cdd:COG1196 824 ETRERFLET 832
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
726-1666 |
5.80e-13 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 75.08 E-value: 5.80e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 726 QKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKdKLFSEVVHKESRVQgllEEIGKTKDDL 805
Cdd:TIGR00606 158 QEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVQEHQMEL-KYLKQYKEKACEIR---DQITSKEAQL 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 806 ATTQSNYKSTDQEFQNFKTLhmdfeqkykmvLEENERMNQEIVNLSKEAQKFDSSlgalKTELSYKTQELQEKTREVQER 885
Cdd:TIGR00606 234 ESSREIVKSYENELDPLKNR-----------LKEIEHNLSKIMKLDNEIKALKSR----KKQMEKDNSELELKMEKVFQG 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 886 LNEmeQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDL--KQLQESLQIERDQLKSDIHDTVNMNIDTQ 963
Cdd:TIGR00606 299 TDE--QLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELlvEQGRLQLQADRHQEHIRARDSLIQSLATR 376
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 964 EQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEF---QQKTIENQEELRLLGDELKKQQEIVAQEKN-- 1038
Cdd:TIGR00606 377 LELDGFERGPFSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKErlkQEQADEIRDEKKGLGRTIELKKEILEKKQEel 456
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1039 -HAIKKEGELSRTCDRLAEVEEKLK---------EKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEH 1108
Cdd:TIGR00606 457 kFVIKELQQLEGSSDRILELDQELRkaerelskaEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQ 536
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1109 METerleLAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRR 1188
Cdd:TIGR00606 537 MEM----LTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINN 612
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1189 SVSEKTAQIINTQD-LEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEmerlRLNE 1267
Cdd:TIGR00606 613 ELESKEEQLSSYEDkLFDVCGSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQ----RVFQ 688
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1268 KFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSK-QEQSLNMKEKDNETTKIVSEMEQFK---P 1343
Cdd:TIGR00606 689 TEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIiDLKEKEIPELRNKLQKVNRDIQRLKndiE 768
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1344 KDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESD---------QLKENIKEIVAKHLETEEELKVA 1414
Cdd:TIGR00606 769 EQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQgsdldrtvqQVNQEKQEKQHELDTVVSKIELN 848
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1415 HCCLKEQEETINELRVNLSEKETE---ISTIQKQLEAINDKLQNKIQEIyekeeQFNIKQISEVQEKVNELKQFKEH-RK 1490
Cdd:TIGR00606 849 RKLIQDQQEQIQHLKSKTNELKSEklqIGTNLQRRQQFEEQLVELSTEV-----QSLIREIKDAKEQDSPLETFLEKdQQ 923
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1491 AKDSALQSIESKMLELTNRLQESQEEI-QIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTavn 1569
Cdd:TIGR00606 924 EKEELISSKETSNKKAQDKVNDIKEKVkNIHGYMKDIENKIQDGKDDYLKQKETELNTVNAQLEECEKHQEKINEDM--- 1000
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1570 ETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRS--VTKERDDLRSVEETLkverDQLKENLRETITR 1647
Cdd:TIGR00606 1001 RLMRQDIDTQKIQERWLQDNLTLRKRENELKEVEEELKQHLKEMGQmqVLQMKQEHQKLEENI----DLIKRNHVLALGR 1076
|
970
....*....|....*....
gi 2462594594 1648 DLEKQEELKIVHMHLKEHQ 1666
Cdd:TIGR00606 1077 QKGYEKEIKHFKKELREPQ 1095
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1373-1916 |
9.78e-13 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 74.31 E-value: 9.78e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1373 AKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVnlseketeistiqkqLEAINDK 1452
Cdd:PRK02224 198 EKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELET---------------LEAEIED 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1453 LQNKIQEIYEKEEQFNiKQISEVQEKVNELKQFKEHRKAK----DSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMK 1528
Cdd:PRK02224 263 LRETIAETEREREELA-EEVRDLRERLEELEEERDDLLAEagldDADAEAVEARREELEDRDEELRDRLEECRVAAQAHN 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1529 RVQEALQIERDQLKENTKEIVAKMKESqEKEYQFLKmTAVNETQEKMC----EIEHLKEQFETQKLNLENIETENirltQ 1604
Cdd:PRK02224 342 EEAESLREDADDLEERAEELREEAAEL-ESELEEAR-EAVEDRREEIEeleeEIEELRERFGDAPVDLGNAEDFL----E 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1605 ILHENLEEMRSVTKE-RDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIvhmhLKEHQETIDKLRGIVSEKTNEI 1683
Cdd:PRK02224 416 ELREERDELREREAElEATLRTARERVEEAEALLEAGKCPECGQPVEGSPHVET----IEEDRERVEELEAELEDLEEEV 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1684 SNMQKDLEHSNDALKAQDlKIQEelriahmhLKEQQETIDKL----RGIVSEKTDKLSNMQKDLENSNAKLQEKiqELKA 1759
Cdd:PRK02224 492 EEVEERLERAEDLVEAED-RIER--------LEERREDLEELiaerRETIEEKRERAEELRERAAELEAEAEEK--REAA 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1760 NEhqlitLKKDVNETQKKVSEMEQLKKQIKDqsltlsklEIENLNlaqKLHENLEEMKSVMKERDNLRRVEETLKLERDQ 1839
Cdd:PRK02224 561 AE-----AEEEAEEAREEVAELNSKLAELKE--------RIESLE---RIRTLLAAIADAEDEIERLREKREALAELNDE 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1840 LKESLQETKARDLEIQQELKTARM-LSKEHKETVDKLREKISEKTiqisdiqKDLDKSKDELQKKIQ--ELQKKELQLLR 1916
Cdd:PRK02224 625 RRERLAEKRERKRELEAEFDEARIeEAREDKERAEEYLEQVEEKL-------DELREERDDLQAEIGavENELEELEELR 697
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1010-1655 |
1.68e-12 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 73.56 E-value: 1.68e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1010 QKTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKI 1089
Cdd:PRK03918 182 EKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKI 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1090 NEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEAtgLQTKEEl 1169
Cdd:PRK03918 262 RELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKE--LEEKEE- 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1170 kiahiHLKEHQETIDELRRSVSEktaqiintqdLEKSHtKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTT 1249
Cdd:PRK03918 339 -----RLEELKKKLKELEKRLEE----------LEERH-ELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEE 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1250 kdsttlarIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLakiqesqsKQEQSLNMKEKDN 1329
Cdd:PRK03918 403 --------IEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKEL--------LEEYTAELKRIEK 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1330 ETTKIVSEMEQFKPKdsaLLRIEIEMLGLSK--RLQESHDEMKSVAKEkddlqrLQEVLQSESDQLKENIKEIVAKHLET 1407
Cdd:PRK03918 467 ELKEIEEKERKLRKE---LRELEKVLKKESEliKLKELAEQLKELEEK------LKKYNLEELEKKAEEYEKLKEKLIKL 537
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1408 EEELKVahccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLqnkiqeiyekeEQFNIKQISEVQEKVNELKQFKE 1487
Cdd:PRK03918 538 KGEIKS----LKKELEKLEELKKKLAELEKKLDELEEELAELLKEL-----------EELGFESVEELEERLKELEPFYN 602
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1488 hrkakdsalqsiesKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKmta 1567
Cdd:PRK03918 603 --------------EYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELR--- 665
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1568 vNETQEKMCEIEHLKEQFETqklnLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITR 1647
Cdd:PRK03918 666 -EEYLELSRELAGLRAELEE----LEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEELREKVKKYKALLKER 740
|
....*...
gi 2462594594 1648 DLEKQEEL 1655
Cdd:PRK03918 741 ALSKVGEI 748
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
731-1400 |
2.03e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 73.05 E-value: 2.03e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 731 KEVEEN----EALREEVIllSELKSLPSEVERLRK--EIQDKSEELhiitsEKDKLFSEVVHKESRVQGLLEEIGKTKDD 804
Cdd:COG1196 182 EATEENlerlEDILGELE--RQLEPLERQAEKAERyrELKEELKEL-----EAELLLLKLRELEAELEELEAELEELEAE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 805 LATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQE 884
Cdd:COG1196 255 LEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEE 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 885 RLNEMEQLKEQLENRDSTLQTVErektlitEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDihdtvnmnidtQE 964
Cdd:COG1196 335 LEEELEELEEELEEAEEELEEAE-------AELAEAEEALLEAEAELAEAEEELEELAEELLEALRA-----------AA 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 965 QLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKTIENQEELRLLGDELKKQQEIVAQEKnhaikke 1044
Cdd:COG1196 397 ELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELL------- 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1045 gelsrtcDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLE-HMETERLELAQKLNEN 1123
Cdd:COG1196 470 -------EEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAvAVLIGVEAAYEAALEA 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1124 YEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQE--TIDELRRSVSEKTAQIINTQ 1201
Cdd:COG1196 543 ALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAvdLVASDLREADARYYVLGDTL 622
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1202 DLEKSHTKLQEEipVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEkfqESQEEIKSLTK 1281
Cdd:COG1196 623 LGRTLVAARLEA--ALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAE---RLAEEELELEE 697
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1282 ERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMlgLSKR 1361
Cdd:COG1196 698 ALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELER--LERE 775
|
650 660 670 680
....*....|....*....|....*....|....*....|....*.
gi 2462594594 1362 LQE-------SHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEI 1400
Cdd:COG1196 776 IEAlgpvnllAIEEYEELEERYDFLSEQREDLEEARETLEEAIEEI 821
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1387-1967 |
2.21e-12 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 72.75 E-value: 2.21e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1387 QSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQ--NKIQEIYEKE 1464
Cdd:TIGR04523 32 DTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINklNSDLSKINSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1465 EQFNIKQISEVQEKVNELKQFKEHRKA-----------KDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEA 1533
Cdd:TIGR04523 112 IKNDKEQKNKLEVELNKLEKQKKENKKnidkflteikkKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDK 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1534 LQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNET-----QEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHE 1608
Cdd:TIGR04523 192 IKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQlkdniEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSE 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1609 NLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLekQEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQK 1688
Cdd:TIGR04523 272 KQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNKEL--KSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKK 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1689 DLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDlENSNAKLQEKIQELKANEHQLitlk 1768
Cdd:TIGR04523 350 ELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQ-EKLNQQKDEQIKKLQQEKELL---- 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1769 kdVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETK 1848
Cdd:TIGR04523 425 --EKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLN 502
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1849 ARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQ--LLRVKEDVNMSHK 1926
Cdd:TIGR04523 503 EEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKENLEKEIDEKNkeIEELKQTQKSLKK 582
|
570 580 590 600
....*....|....*....|....*....|....*....|.
gi 2462594594 1927 KINEMEQLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIR 1967
Cdd:TIGR04523 583 KQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAK 623
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1362-2087 |
2.45e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 73.18 E-value: 2.45e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1362 LQESHDEMKSVAKEKDDLQRLQEvLQSESDQLKenIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEIST 1441
Cdd:TIGR02169 193 IDEKRQQLERLRREREKAERYQA-LLKEKREYE--GYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEE 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1442 IQKQLEAINDKLQNKIQEiyekeeqfnikQISEVQEKVNELKqfKEHRKAKDSaLQSIESKMLELTNRLQESQEEIQIMI 1521
Cdd:TIGR02169 270 IEQLLEELNKKIKDLGEE-----------EQLRVKEKIGELE--AEIASLERS-IAEKERELEDAEERLAKLEAEIDKLL 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1522 KEKEEMKRVQEALQIERDQLKENTKEIVAKMkesqekeyqflkMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIR 1601
Cdd:TIGR02169 336 AEIEELEREIEEERKRRDKLTEEYAELKEEL------------EDLRAELEEVDKEFAETRDELKDYREKLEKLKREINE 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1602 LTQILHENLEEMRSVTKERDDLRSveetlKVERdqLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEKTN 1681
Cdd:TIGR02169 404 LKRELDRLQEELQRLSEELADLNA-----AIAG--IEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKE 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1682 EISNMQKDLEHSN---DALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSE---------------KTDKLSNMQKDL 1743
Cdd:TIGR02169 477 EYDRVEKELSKLQrelAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQlgsvgeryataievaAGNRLNNVVVED 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1744 ENSNAKLQEKIQELKANEHQLITLKK---------------------DVNETQKK--------------VSEMEQLKKQ- 1787
Cdd:TIGR02169 557 DAVAKEAIELLKRRKAGRATFLPLNKmrderrdlsilsedgvigfavDLVEFDPKyepafkyvfgdtlvVEDIEAARRLm 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1788 ------------------IKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKA 1849
Cdd:TIGR02169 637 gkyrmvtlegelfeksgaMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASR 716
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1850 RDLEIQQELKtarMLSKEHKetvdKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKIN 1929
Cdd:TIGR02169 717 KIGEIEKEIE---QLEQEEE----KLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLS 789
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1930 E--MEQLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIRIVAKERDELRRIKESLKMERDQFIATLREMIARDRQNHQV 2007
Cdd:TIGR02169 790 HsrIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEE 869
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2008 KPEKRLlsdgqqhlteSLREKCSRIKELLKRYSEMDDHYECLNRLSLDLEKEIEFQKELSMRVKANLSLPYLQTKHIEKL 2087
Cdd:TIGR02169 870 LEELEA----------ALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDP 939
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1267-1910 |
3.81e-12 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 71.98 E-value: 3.81e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1267 EKFQESQEEIKSLTKerdNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQslnmkeKDNETTKIVSEMEQFKPKDS 1346
Cdd:TIGR04523 68 EKINNSNNKIKILEQ---QIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQ------KNKLEVELNKLEKQKKENKK 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1347 ALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVahccLKEQEETIN 1426
Cdd:TIGR04523 139 NIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSN----LKKKIQKNK 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1427 ELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFN------IKQISEVQEKVNELKQFKEHRKAKDSALQSIE 1500
Cdd:TIGR04523 215 SLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNqlkdeqNKIKKQLSEKQKELEQNNKKIKELEKQLNQLK 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1501 SKMLELTNrlqesQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEI-----VAKMKESQEKEYQFLKMTAVNETQEKM 1575
Cdd:TIGR04523 295 SEISDLNN-----QKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIIsqlneQISQLKKELTNSESENSEKQRELEEKQ 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1576 CEIEHLKEQFETQKLNLENIETENIRLTQILHENLE-------EMRSVTKERDDLRSVEETLKVERDQLKENLRETITRD 1648
Cdd:TIGR04523 370 NEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKlnqqkdeQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQD 449
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1649 LEKQEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEHSN---DALKAQDLKIQEELRIAHMHLKEQQETIDKL 1725
Cdd:TIGR04523 450 SVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEkelKKLNEEKKELEEKVKDLTKKISSLKEKIEKL 529
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1726 RGIVSEKTDKLSNMQKDLENSNAKL---------QEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQsltLS 1796
Cdd:TIGR04523 530 ESEKKEKESKISDLEDELNKDDFELkkenlekeiDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKE---IE 606
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1797 KLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETV---- 1872
Cdd:TIGR04523 607 EKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTKIDDIIELMkdwl 686
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....
gi 2462594594 1873 ----------------DKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKK 1910
Cdd:TIGR04523 687 kelslhykkyitrmirIKDLPKLEEKYKEIEKELKKLDEFSKELENIIKNFNKK 740
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1419-2274 |
4.45e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 72.40 E-value: 4.45e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1419 KEQEETINELRVNLSEKETEISTIQKQLEAIndKLQNKIQEIY-EKEEQFNIKQISEVqekVNELKQFKEHRKAKDSALQ 1497
Cdd:TIGR02168 175 KETERKLERTRENLDRLEDILNELERQLKSL--ERQAEKAERYkELKAELRELELALL---VLRLEELREELEELQEELK 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1498 SIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEivakmKESQEKEYQFLKMTAVNETQEKMCE 1577
Cdd:TIGR02168 250 EAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISR-----LEQQKQILRERLANLERQLEELEAQ 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1578 IEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLREtitrdLEKQEELKi 1657
Cdd:TIGR02168 325 LEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQ-----LELQIASL- 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1658 vhmhlkehqetidklrgivsekTNEISNMQKDLEHSNDALKAQDLKIQEELRiahmhlKEQQETIDKLRGIVSEKTDKLS 1737
Cdd:TIGR02168 399 ----------------------NNEIERLEARLERLEDRRERLQQEIEELLK------KLEEAELKELQAELEELEEELE 450
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1738 NMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDqsltLSKLEIENLNLAQKLHENLEEMK 1817
Cdd:TIGR02168 451 ELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEG----FSEGVKALLKNQSGLSGILGVLS 526
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1818 SVMKERDNLRR-VEETLKLERDQLKESLQETKARDLEIQQELKTARM----LSKEHKETVDKLREKISEKTIQISDIQKD 1892
Cdd:TIGR02168 527 ELISVDEGYEAaIEAALGGRLQAVVVENLNAAKKAIAFLKQNELGRVtflpLDSIKGTEIQGNDREILKNIEGFLGVAKD 606
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1893 LDKSKDELQKKIQELqkkeLQLLRVKEDVNMSHKKINEMEQ-----------------LKKQFEAQNLSMQSVRMDNFQL 1955
Cdd:TIGR02168 607 LVKFDPKLRKALSYL----LGGVLVVDDLDNALELAKKLRPgyrivtldgdlvrpggvITGGSAKTNSSILERRREIEEL 682
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1956 TKKLHESLEEIRIVAKERDELRRIKESLKMERDQFIATLREMiarDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKEL 2035
Cdd:TIGR02168 683 EEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEEL---SRQISALRKDLARLEAEVEQLEERIAQLSKELTEL 759
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2036 LKRYSEMDDHYECLNRLSLDLEKEIEFQKELSMRVKANLSLpylQTKHIEKLFTANQRCSMEFHRIMKKLKYVlsyvtki 2115
Cdd:TIGR02168 760 EAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKA---LREALDELRAELTLLNEEAANLRERLESL------- 829
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2116 kEEQHESINKFEMDFIDEVEKQKELLIKIQHLQQDCDVPSRELRD-LKLNQNMDLHIEEILKDfSESEFPSIKTEFQQVL 2194
Cdd:TIGR02168 830 -ERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESeLEALLNERASLEEALAL-LRSELEELSEELRELE 907
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2195 SNRKEMTQFLEEwLNTRfdIEKLKNGIQKENDRICQVNNFFNNRIIAIMNESTEFEERSATISKEWEQDLKSLKEKNEKL 2274
Cdd:TIGR02168 908 SKRSELRRELEE-LREK--LAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1298-2061 |
4.58e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 72.02 E-value: 4.58e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1298 DQLKEHIRETLAKIQESQSKQEqsLNMKEKDNETTKIVSEMEQ-FKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEK 1376
Cdd:TIGR02169 169 DRKKEKALEELEEVEENIERLD--LIIDEKRQQLERLRREREKaERYQALLKEKREYEGYELLKEKEALERQKEAIERQL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1377 DDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKvahcclKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNK 1456
Cdd:TIGR02169 247 ASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIK------DLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDA 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1457 IQEIYEKEEQFN-----IKQISEVQEKV--------NELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKE 1523
Cdd:TIGR02169 321 EERLAKLEAEIDkllaeIEELEREIEEErkrrdkltEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKRE 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1524 KEEMKRVQEALQIERDQLKENTKEIVAKMK--ESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIR 1601
Cdd:TIGR02169 401 INELKRELDRLQEELQRLSEELADLNAAIAgiEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDR 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1602 LTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETI--TRDLEKQEElkivhmhlkEHQETID-----KLRG 1674
Cdd:TIGR02169 481 VEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHgtVAQLGSVGE---------RYATAIEvaagnRLNN 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1675 IVSEKT-----------------------NEISNMQKDLEHS---------------------------NDALKAQDLKI 1704
Cdd:TIGR02169 552 VVVEDDavakeaiellkrrkagratflplNKMRDERRDLSILsedgvigfavdlvefdpkyepafkyvfGDTLVVEDIEA 631
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1705 QEELRIAHMHLKEQQETIDKLRGIV--SEKTDKLSNMQKDLENSNAKLQEKIQELKAnehQLITLKKDVNETQKKVSEme 1782
Cdd:TIGR02169 632 ARRLMGKYRMVTLEGELFEKSGAMTggSRAPRGGILFSRSEPAELQRLRERLEGLKR---ELSSLQSELRRIENRLDE-- 706
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1783 qlkkqikdqsltlskleienlnLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTAR 1862
Cdd:TIGR02169 707 ----------------------LSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELE 764
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1863 MLSKEHKETVDKLREKISEktIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEAQN 1942
Cdd:TIGR02169 765 ARIEELEEDLHKLEEALND--LEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQR 842
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1943 LSMQSVRMDNFQ----LTKKLHESLEEIRIVAKERDELRRIKESLKMERDQFIATLREM-IARDRQNHQVKPEKRLLSDg 2017
Cdd:TIGR02169 843 IDLKEQIKSIEKeienLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELeRKIEELEAQIEKKRKRLSE- 921
|
810 820 830 840
....*....|....*....|....*....|....*....|....
gi 2462594594 2018 qqhLTESLREKCSRIKELLKRYSEMDDHYECLNRLSlDLEKEIE 2061
Cdd:TIGR02169 922 ---LKAKLEALEEELSEIEDPKGEDEEIPEEELSLE-DVQAELQ 961
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1226-1989 |
7.14e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 71.71 E-value: 7.14e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1226 NVKEVSETQETMNELELLTEQSTT---KDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTikEALEVKHDQLKE 1302
Cdd:PTZ00121 1025 NIEKIEELTEYGNNDDVLKEKDIIdedIDGNHEGKAEAKAHVGQDEGLKPSYKDFDFDAKEDNRAD--EATEEAFGKAEE 1102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1303 HIRETLAKIQESQSKQEQSlnMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSV----AKEKDD 1378
Cdd:PTZ00121 1103 AKKTETGKAEEARKAEEAK--KKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARkaedAKKAEA 1180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1379 LQRLQEVLQSESDQLKENIKEIVAKHlETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQ 1458
Cdd:PTZ00121 1181 ARKAEEVRKAEELRKAEDARKAEAAR-KAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEE 1259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1459 EIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAkDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIER 1538
Cdd:PTZ00121 1260 ARMAHFARRQAAIKAEEARKADELKKAEEKKKA-DEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKA 1338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1539 DQLKEntKEIVAKMKESQEKEYQflkmtavnETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRsvtK 1618
Cdd:PTZ00121 1339 EEAKK--AAEAAKAEAEAAADEA--------EAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDK---K 1405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1619 ERDDLRSVEETlKVERDQLKENLRETitrdlEKQEELKIVHMHLKEHQETIDKlrgivSEKTNEISNMQKDLEHSNDA-- 1696
Cdd:PTZ00121 1406 KADELKKAAAA-KKKADEAKKKAEEK-----KKADEAKKKAEEAKKADEAKKK-----AEEAKKAEEAKKKAEEAKKAde 1474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1697 --LKAQDLKIQEELRIAHMHLKEQQETIDKlrgiVSEKTDKLSNMQKDLENSNAKLQEKIQEL-KANEHQLITLKKDVNE 1773
Cdd:PTZ00121 1475 akKKAEEAKKADEAKKKAEEAKKKADEAKK----AAEAKKKADEAKKAEEAKKADEAKKAEEAkKADEAKKAEEKKKADE 1550
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1774 TQK--------KVSEMEQLKKQIKDQSLTLSKLEIenlnlAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKeslQ 1845
Cdd:PTZ00121 1551 LKKaeelkkaeEKKKAEEAKKAEEDKNMALRKAEE-----AKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIK---A 1622
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1846 ETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQisdiQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSH 1925
Cdd:PTZ00121 1623 EELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIK----AAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEA 1698
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462594594 1926 KKINEMEQLKKQFEAQNLSMQSVRmdnfqltKKLHESLEEIRIVAKERDELRRIKESLKMERDQ 1989
Cdd:PTZ00121 1699 EEAKKAEELKKKEAEEKKKAEELK-------KAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEE 1755
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
515-1299 |
7.31e-12 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 71.30 E-value: 7.31e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 515 EQLRTEKEEMELKLKEKNDLDEFEALERKTK------KDQEMQLihEISNLKNLVKHAEVYNQDLENELSSKVELLRE-- 586
Cdd:pfam15921 81 EEYSHQVKDLQRRLNESNELHEKQKFYLRQSvidlqtKLQEMQM--ERDAMADIRRRESQSQEDLRNQLQNTVHELEAak 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 587 --KEDQIKKLQEYIDSQKleniKMDLSYslESIEdpKQMKQTLFDAETVALDAKRE-----SAFLRSENLELKEKMKELA 659
Cdd:pfam15921 159 clKEDMLEDSNTQIEQLR----KMMLSH--EGVL--QEIRSILVDFEEASGKKIYEhdsmsTMHFRSLGSAISKILRELD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 660 TTYKQMENDIQLYQSQLEA-KKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELnkEVEENEA 738
Cdd:pfam15921 231 TEISYLKGRIFPVEDQLEAlKSESQNKIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQL--EIIQEQA 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 739 LREEVILLSELKSLPSEVERLRKEI-------QDKSEELHI-----------ITSEKDKLFSEVVHKESRVQGLLEEIGK 800
Cdd:pfam15921 309 RNQNSMYMRQLSDLESTVSQLRSELreakrmyEDKIEELEKqlvlanselteARTERDQFSQESGNLDDQLQKLLADLHK 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 801 TKDDLA-TTQSNYKSTDQEFQNFKTLhmdfeqkykmvleenERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKT 879
Cdd:pfam15921 389 REKELSlEKEQNKRLWDRDTGNSITI---------------DHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAI 453
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 880 REVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSdihdTVNMN 959
Cdd:pfam15921 454 QGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRS----RVDLK 529
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 960 IDTQEQLRNALESLKQHQETINTLKSKISEEvsrnlhmeentgetkdefqqktienqeelrllgdelKKQQEIVAQEKNH 1039
Cdd:pfam15921 530 LQELQHLKNEGDHLRNVQTECEALKLQMAEK------------------------------------DKVIEILRQQIEN 573
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1040 AIKKEGELSRTCDRLaEVEEKLKEKSQQLQEKQQQLLNVQEEMSEmqKKINEIENLKNELKNKELTLEHMETERLELAQK 1119
Cdd:pfam15921 574 MTQLVGQHGRTAGAM-QVEKAQLEKEINDRRLELQEFKILKDKKD--AKIRELEARVSDLELEKVKLVNAGSERLRAVKD 650
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1120 LNENYEE-VKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDE------------- 1185
Cdd:pfam15921 651 IKQERDQlLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSmegsdghamkvam 730
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1186 -LRRSVSEKTAQIINTQD----LEKSHTKLQEEIPVLHEEQELLPN--VKEVSETQETMNELELLTEQStTKDSTTLARI 1258
Cdd:pfam15921 731 gMQKQITAKRGQIDALQSkiqfLEEAMTNANKEKHFLKEEKNKLSQelSTVATEKNKMAGELEVLRSQE-RRLKEKVANM 809
|
810 820 830 840
....*....|....*....|....*....|....*....|.
gi 2462594594 1259 EMERLRLNEKFQESQEEIKSLTKERDNLKtIKEALEVKHDQ 1299
Cdd:pfam15921 810 EVALDKASLQFAECQDIIQRQEQESVRLK-LQHTLDVKELQ 849
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
345-1137 |
1.05e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 70.86 E-value: 1.05e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 345 LKRYRKEIMDLKKQLEEVSLETRAQAMEKDQLAQLLEEKDLLQKVQNEKIENLTRMLVTSSSL--TLQQELKAKRKRRvt 422
Cdd:TIGR02168 234 LEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEisRLEQQKQILRERL-- 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 423 wclgkinkmknsNYADQFNIPTNITTKTHKLSINLLREIDESVCSESDVFSNTLDTLSEIEWNPATKLLNQEN----IES 498
Cdd:TIGR02168 312 ------------ANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESrleeLEE 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 499 ELNSLRADYDNLVLDYEQLRTEKEEMELKLKE-----KNDLDEFEALERKTKKDQEMQLIHEISNLKNLVKHAEVYNQDL 573
Cdd:TIGR02168 380 QLETLRSKVAQLELQIASLNNEIERLEARLERledrrERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERL 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 574 ENELSSKVELLREKEDQIKKLQEYIDSqklenikmdLSYSLESIEDPKQMKQTLFDAETVALDAKRESAFLR---SENLE 650
Cdd:TIGR02168 460 EEALEELREELEEAEQALDAAERELAQ---------LQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILgvlSELIS 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 651 LKEKMKELATTYkqMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELn 730
Cdd:TIGR02168 531 VDEGYEAAIEAA--LGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDL- 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 731 keVEENEALReevILLSELKSLPSEVERLRKEIQDKSEELH---IITSEKDKLFSEVV---HKESRVQGLLE---EIGKT 801
Cdd:TIGR02168 608 --VKFDPKLR---KALSYLLGGVLVVDDLDNALELAKKLRPgyrIVTLDGDLVRPGGVitgGSAKTNSSILErrrEIEEL 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 802 KDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALktelsykTQELQEKTRE 881
Cdd:TIGR02168 683 EEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQL-------EERIAQLSKE 755
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 882 VQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNID 961
Cdd:TIGR02168 756 LTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAA 835
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 962 TQEQLRNALESLKQHQEtintlkskiseevsrnlHMEENTGEtkdefqqktienQEELRLLGDELKKQQEIVAQEKNhai 1041
Cdd:TIGR02168 836 TERRLEDLEEQIEELSE-----------------DIESLAAE------------IEELEELIEELESELEALLNERA--- 883
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1042 KKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNK-----ELTLEHMETERLEL 1116
Cdd:TIGR02168 884 SLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERlseeySLTLEEAEALENKI 963
|
810 820
....*....|....*....|.
gi 2462594594 1117 AQKLNENYEEVKSITKERKVL 1137
Cdd:TIGR02168 964 EDDEEEARRRLKRLENKIKEL 984
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
724-1989 |
1.12e-11 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 71.24 E-value: 1.12e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 724 DLQKELNKEVEENEALReevILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKEsrvqglleeigktkd 803
Cdd:TIGR01612 480 DIKKDIDENSKQDNTVK---LILMRMKDFKDIIDFMELYKPDEVPSKNIIGFDIDQNIKAKLYKE--------------- 541
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 804 dlatTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSS---LGALKTELSYKTQELQEKTR 880
Cdd:TIGR01612 542 ----IEAGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEKEIKDLFDKYLEIDDEiiyINKLKLELKEKIKNISDKNE 617
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 881 EVQERLNEME------------------QLKEQLENRDSTLQTVEREKTLITE-KLQQTLEEVKTLTQEKD--------D 933
Cdd:TIGR01612 618 YIKKAIDLKKiiennnayidelakispyQVPEHLKNKDKIYSTIKSELSKIYEdDIDALYNELSSIVKENAidntedkaK 697
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 934 LKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESlkqhqeTINTLKSKISEEVSRNLHMEENTGETKDEFQQKTI 1013
Cdd:TIGR01612 698 LDDLKSKIDKEYDKIQNMETATVELHLSNIENKKNELLD------IIVEIKKHIHGEINKDLNKILEDFKNKEKELSNKI 771
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1014 ENQEELRllgDELKKQQEIVAQEKNHaikkegelsrTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIE 1093
Cdd:TIGR01612 772 NDYAKEK---DELNKYKSKISEIKNH----------YNDQINIDNIKDEDAKQNYDKSKEYIKTISIKEDEIFKIINEMK 838
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1094 NLKNELKNKELTLEHMETERLElaqKLNENYEEVKSITKERKvlkelqksfeterdhlrgyiREIeatglqTKEELKIAH 1173
Cdd:TIGR01612 839 FMKDDFLNKVDKFINFENNCKE---KIDSEHEQFAELTNKIK--------------------AEI------SDDKLNDYE 889
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1174 IHLKEHQETIDELRRSVsEKTAQIINTQDLEKSHTKL----QEEIPVLHEEQELL-----PNVKEVSETQETMNELELLT 1244
Cdd:TIGR01612 890 KKFNDSKSLINEINKSI-EEEYQNINTLKKVDEYIKIcentKESIEKFHNKQNILkeilnKNIDTIKESNLIEKSYKDKF 968
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1245 EQSTTKDSTTLARIEMErLRLNEKFQESQEEIKSLTKERDNLKTIKEalEVKHDQLKEHIRETLAKIQESQSKQEQSLNM 1324
Cdd:TIGR01612 969 DNTLIDKINELDKAFKD-ASLNDYEAKNNELIKYFNDLKANLGKNKE--NMLYHQFDEKEKATNDIEQKIEDANKNIPNI 1045
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1325 KEKDNETT-KIVSEMEQFKPKDSALLRIEIemLGLSKRLQESHDEMKSVAKEK--DDLQRLQEV-LQSESDQLKENIKEI 1400
Cdd:TIGR01612 1046 EIAIHTSIyNIIDEIEKEIGKNIELLNKEI--LEEAEINITNFNEIKEKLKHYnfDDFGKEENIkYADEINKIKDDIKNL 1123
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1401 ---VAKHLETEEELKvahcclKEQEETINELRVNLS--EKETEISTIQKQLEAINDKLQNKIQEIYEKEEQF-NIKQI-S 1473
Cdd:TIGR01612 1124 dqkIDHHIKALEEIK------KKSENYIDEIKAQINdlEDVADKAISNDDPEEIEKKIENIVTKIDKKKNIYdEIKKLlN 1197
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1474 EVQEKVNELKQFKEHRKAKDSALQSIESKMLEltnrlqesqeEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMK 1553
Cdd:TIGR01612 1198 EIAEIEKDKTSLEEVKGINLSYGKNLGKLFLE----------KIDEEKKKSEHMIKAMEAYIEDLDEIKEKSPEIENEMG 1267
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1554 ESQEKEYQflkMTAVNETQEKMceiehlKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVE 1633
Cdd:TIGR01612 1268 IEMDIKAE---METFNISHDDD------KDHHIISKKHDENISDIREKSLKIIEDFSEESDINDIKKELQKNLLDAQKHN 1338
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1634 RDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSektNEISNMQKDLEHSNDALKAQDLKIQEELRIAHM 1713
Cdd:TIGR01612 1339 SDINLYLNEIANIYNILKLNKIKKIIDEVKEYTKEIEENNKNIK---DELDKSEKLIKKIKDDINLEECKSKIESTLDDK 1415
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1714 HLKEQQETIDKLRG-IVSEKTDKLSNMQKDLE-NSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQiKDQ 1791
Cdd:TIGR01612 1416 DIDECIKKIKELKNhILSEESNIDTYFKNADEnNENVLLLFKNIEMADNKSQHILKIKKDNATNDHDFNINELKEH-IDK 1494
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1792 SLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNlrrveetlKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKET 1871
Cdd:TIGR01612 1495 SKGCKDEADKNAKAIEKNKELFEQYKKDVTELLN--------KYSALAIKNKFAKTKKDSEIIIKEIKDAHKKFILEAEK 1566
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1872 VDKLREKISEKTIQISDIQKDLDKSKD---ELQKKIQELQKKELQLLRVKEDVNmshKKINEMEQLKKQFEAQNLSMQSV 1948
Cdd:TIGR01612 1567 SEQKIKEIKKEKFRIEDDAAKNDKSNKaaiDIQLSLENFENKFLKISDIKKKIN---DCLKETESIEKKISSFSIDSQDT 1643
|
1290 1300 1310 1320
....*....|....*....|....*....|....*....|....*....
gi 2462594594 1949 RM----DNFQLTKKLHESLEE----IRIVAKERDELRRIKESLKMERDQ 1989
Cdd:TIGR01612 1644 ELkengDNLNSLQEFLESLKDqkknIEDKKKELDELDSEIEKIEIDVDQ 1692
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1053-1673 |
2.60e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 69.68 E-value: 2.60e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1053 RLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITK 1132
Cdd:PRK02224 214 ELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEE 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1133 ERKVLKElqksfETERDHLrgyirEIEATGLQtKEELkiahihlkehQETIDELRRSVSEKTAQIintQDLEKSHTKLQE 1212
Cdd:PRK02224 294 ERDDLLA-----EAGLDDA-----DAEAVEAR-REEL----------EDRDEELRDRLEECRVAA---QAHNEEAESLRE 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1213 EIPVLHEEQEllpnvkevsETQETMNELEllTEQSTTKDSTTLARIEMERLRlnEKFQESQEEIKSLTKERDNLKTIKEA 1292
Cdd:PRK02224 350 DADDLEERAE---------ELREEAAELE--SELEEAREAVEDRREEIEELE--EEIEELRERFGDAPVDLGNAEDFLEE 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1293 LEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNettkiVSEMEQfkpkdsallriEIEMLGLSKRLQESHDEMKSV 1372
Cdd:PRK02224 417 LREERDELREREAELEATLRTARERVEEAEALLEAGK-----CPECGQ-----------PVEGSPHVETIEEDRERVEEL 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1373 AKEKDDLQRLQEVLQSESDQLKEnikeivAKHLETEEELkvahccLKEQEETINELrvnLSEKETEISTIQKQLEAINDK 1452
Cdd:PRK02224 481 EAELEDLEEEVEEVEERLERAED------LVEAEDRIER------LEERREDLEEL---IAERRETIEEKRERAEELRER 545
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1453 LQNKIQEIYEKEEQFNiKQISEVQEKVNELKQFKEHRKAKDSALQSIeskmleltNRLQESQEEIQIMIKEKEEMKRVQE 1532
Cdd:PRK02224 546 AAELEAEAEEKREAAA-EAEEEAEEAREEVAELNSKLAELKERIESL--------ERIRTLLAAIADAEDEIERLREKRE 616
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1533 ALQIERDQLKENTKEIVAKMKESQEKeyqfLKMTAVNETQEKmceiehlKEQFETQklnLENIEtenirltqilhenlEE 1612
Cdd:PRK02224 617 ALAELNDERRERLAEKRERKRELEAE----FDEARIEEARED-------KERAEEY---LEQVE--------------EK 668
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462594594 1613 MRSVTKERDDLRSVEETLKVERDQLkENLRETITRDLEKQEELKIVHMHLKEHQETIDKLR 1673
Cdd:PRK02224 669 LDELREERDDLQAEIGAVENELEEL-EELRERREALENRVEALEALYDEAEELESMYGDLR 728
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
583-1294 |
8.52e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 68.04 E-value: 8.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 583 LLREKEDQIKKLQEyidsqklenikmdlsyslesiedpkqmkqtlfDAEtVALDAKresaflrsenlELKEKMKELatty 662
Cdd:COG1196 194 ILGELERQLEPLER--------------------------------QAE-KAERYR-----------ELKEELKEL---- 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 663 kqmenDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDgkvpkdllcnlELEGKITDLQKELNKEVEENEALREE 742
Cdd:COG1196 226 -----EAELLLLKLRELEAELEELEAELEELEAELEELEAELA-----------ELEAELEELRLELEELELELEEAQAE 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 743 VILLSelkslpSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNF 822
Cdd:COG1196 290 EYELL------AELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEA 363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 823 KTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDST 902
Cdd:COG1196 364 EEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEA 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 903 LQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKqhqetiNT 982
Cdd:COG1196 444 LEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALL------LA 517
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 983 LKSKISEEVSRNLHMEENtgetkdefQQKTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLK 1062
Cdd:COG1196 518 GLRGLAGAVAVLIGVEAA--------YEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALA 589
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1063 EKSQQLQEKQQQLLNVQEEmsemqkkinEIENLKNELKNKELTLEHMETERLELAQKLNENY-EEVKSITKERKVLKELQ 1141
Cdd:COG1196 590 AALARGAIGAAVDLVASDL---------READARYYVLGDTLLGRTLVAARLEAALRRAVTLaGRLREVTLEGEGGSAGG 660
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1142 KSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQ 1221
Cdd:COG1196 661 SLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEE 740
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1222 ELLPNVKEVSETQETMNELELLTEQsttkdSTTLARIEMERLRLN-------EKFQESQEEIKSLTKERDNLKTIKEALE 1294
Cdd:COG1196 741 LLEEEELLEEEALEELPEPPDLEEL-----ERELERLEREIEALGpvnllaiEEYEELEERYDFLSEQREDLEEARETLE 815
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1044-1639 |
9.43e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 67.65 E-value: 9.43e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1044 EGELSRTCDRLAEVE----------EKLK---------------------------------EKSQQLQEKQQQLLNVQE 1080
Cdd:COG1196 178 ERKLEATEENLERLEdilgelerqlEPLErqaekaeryrelkeelkeleaellllklreleaELEELEAELEELEAELEE 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1081 EMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEA 1160
Cdd:COG1196 258 LEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEE 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1161 TGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIpvLHEEQELLPNVKEVSETQETMNEL 1240
Cdd:COG1196 338 ELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEA--LRAAAELAAQLEELEEAEEALLER 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1241 ELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQ 1320
Cdd:COG1196 416 LERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLL 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1321 SLNMKEKDNETTKIVSEMEQfKPKDSALLRIEIEMLG------------LSKRLQESHDEMKSVAKEKDDL---QRLQEV 1385
Cdd:COG1196 496 LLEAEADYEGFLEGVKAALL-LAGLRGLAGAVAVLIGveaayeaaleaaLAAALQNIVVEDDEVAAAAIEYlkaAKAGRA 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1386 LQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEE 1465
Cdd:COG1196 575 TFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGE 654
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1466 QFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEiqimiKEKEEMKRVQEALQIERDQLKENT 1545
Cdd:COG1196 655 GGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEE-----ERELAEAEEERLEEELEEEALEEQ 729
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1546 KEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLtqilhenLEEMRSVTKERDDLRS 1625
Cdd:COG1196 730 LEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGPVNLLA-------IEEYEELEERYDFLSE 802
|
650
....*....|....
gi 2462594594 1626 VEETLKVERDQLKE 1639
Cdd:COG1196 803 QREDLEEARETLEE 816
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
828-1395 |
1.02e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 67.40 E-value: 1.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 828 DFEQKYKMVLEENERMNQEIVNLskeaQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVE 907
Cdd:PRK03918 159 DYENAYKNLGEVIKEIKRRIERL----EKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELE 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 908 REKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLK---------SDIHDTVNMNIDTQEQLRNALESLKQHQE 978
Cdd:PRK03918 235 ELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEeleekvkelKELKEKAEEYIKLSEFYEEYLDELREIEK 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 979 TINTLKSKIsEEVSRNLHMEENTGETKDEFQQKTIENQEELRLLGDELKKQQEIVAQEKN-HAIKKEgelsRTCDRLAEV 1057
Cdd:PRK03918 315 RLSRLEEEI-NGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEElERLKKR----LTGLTPEKL 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1058 EEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELK---------NKELTLEH----METERLELAQKLNENY 1124
Cdd:PRK03918 390 EKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKkakgkcpvcGRELTEEHrkelLEEYTAELKRIEKELK 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1125 EEVKSITKERKVLKELQKSFETERDHLRGY-----IREIEA-TGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQII 1198
Cdd:PRK03918 470 EIEEKERKLRKELRELEKVLKKESELIKLKelaeqLKELEEkLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELE 549
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1199 NTQDLEKSHTKLQEEIPVLHEEQEllpnvkevsetqETMNELELLTEQSTTKDSTTLARIE---MERLRLNEKFQESQEE 1275
Cdd:PRK03918 550 KLEELKKKLAELEKKLDELEEELA------------ELLKELEELGFESVEELEERLKELEpfyNEYLELKDAEKELERE 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1276 IKSLTKERDNLKTIKEALEVKHDQLKEhIRETLAKIQESQSKQEQslnmKEKDNETTKIVSEMEQFKPKDSALLRIEIEM 1355
Cdd:PRK03918 618 EKELKKLEEELDKAFEELAETEKRLEE-LRKELEELEKKYSEEEY----EELREEYLELSRELAGLRAELEELEKRREEI 692
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 2462594594 1356 LGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKE 1395
Cdd:PRK03918 693 KKTLEKLKEELEEREKAKKELEKLEKALERVEELREKVKK 732
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1406-2000 |
1.07e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 67.65 E-value: 1.07e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1406 ETEEELKVAhcclkeqEEtiNELRVN--LSEKETEISTIQKQLE------AINDKLQNKIQEIYEKEEQFNIKQISEVQE 1477
Cdd:COG1196 176 EAERKLEAT-------EE--NLERLEdiLGELERQLEPLERQAEkaeryrELKEELKELEAELLLLKLRELEAELEELEA 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1478 KVNELKqfkEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKE----KEEMKRVQEALQIERDQLKENTKEIVAKMK 1553
Cdd:COG1196 247 ELEELE---AELEELEAELAELEAELEELRLELEELELELEEAQAEeyelLAELARLEQDIARLEERRRELEERLEELEE 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1554 ESQEKEYQFLKMTAVNETQEKmcEIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVE 1633
Cdd:COG1196 324 ELAELEEELEELEEELEELEE--ELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQ 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1634 RDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRgivsEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHM 1713
Cdd:COG1196 402 LEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEE----EALEEAAEEEAELEEEEEALLELLAELLEEAALLEA 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1714 HLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLIT-----------------LKKDVNETQK 1776
Cdd:COG1196 478 ALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIgveaayeaaleaalaaaLQNIVVEDDE 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1777 KVSEMEQLKKQIKDQSLT-LSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLkeslqetkardLEIQ 1855
Cdd:COG1196 558 VAAAAIEYLKAAKAGRATfLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTL-----------LGRT 626
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1856 QELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLK 1935
Cdd:COG1196 627 LVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEE 706
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462594594 1936 KQFEAQNLSMQSVRMDNFQLTKKLHESLEEIRIVAKERDELRRIKESLKMERDQFIATLREMIAR 2000
Cdd:COG1196 707 RELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELER 771
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1257-1983 |
1.59e-10 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 66.92 E-value: 1.59e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1257 RIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLnmKEKDNETTKIVS 1336
Cdd:pfam02463 170 KKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLN--EERIDLLQELLR 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1337 EMEQFKPKDSALLRIEIEMLGLSKRLQ-ESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAH 1415
Cdd:pfam02463 248 DEQEEIESSKQEIEKEEEKLAQVLKENkEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1416 CCLKEQEETINELRVNLSEKE--TEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKD 1493
Cdd:pfam02463 328 KELKKEKEEIEELEKELKELEikREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEA 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1494 SALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQE 1573
Cdd:pfam02463 408 QLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLE 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1574 KMCEIehLKEQFETQKLNLENIETENIRLTQILHENLE---------------------EMRSVTKERDDLRSVEETLKV 1632
Cdd:pfam02463 488 LLLSR--QKLEERSQKESKARSGLKVLLALIKDGVGGRiisahgrlgdlgvavenykvaISTAVIVEVSATADEVEERQK 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1633 ERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIvSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAH 1712
Cdd:pfam02463 566 LVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQL-DKATLEADEDDKRAKVVEGILKDTELTKLKESAKAK 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1713 MHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENsNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQS 1792
Cdd:pfam02463 645 ESGLRKGVSLEEGLAEKSEVKASLSELTKELLE-IQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELL 723
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1793 LTLSKLEIENLNLAQKlhENLEEMKSVMKERDNLRRveETLKLERDQLKESLQETKARDLEIQQELKTARmLSKEHKETV 1872
Cdd:pfam02463 724 ADRVQEAQDKINEELK--LLKQKIDEEEEEEEKSRL--KKEEKEEEKSELSLKEKELAEEREKTEKLKVE-EEKEEKLKA 798
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1873 DKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLL---RVKEDVNMSHKKINEMEQLKKQFEAQNLSMQSVR 1949
Cdd:pfam02463 799 QEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALElkeEQKLEKLAEEELERLEEEITKEELLQELLLKEEE 878
|
730 740 750
....*....|....*....|....*....|....
gi 2462594594 1950 MDNFQLTKKLHESLEEIRIVAKERDELRRIKESL 1983
Cdd:pfam02463 879 LEEQKLKDELESKEEKEKEEKKELEEESQKLNLL 912
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1511-2052 |
1.72e-10 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 66.99 E-value: 1.72e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1511 QESQEEIQIMIKEKEEmKRVQEALQIERDQLKENTKEIvaKMKESQEKEYQFLKMTA---VNETQEKMCEIEHLKEQFET 1587
Cdd:PRK02224 186 RGSLDQLKAQIEEKEE-KDLHERLNGLESELAELDEEI--ERYEEQREQARETRDEAdevLEEHEERREELETLEAEIED 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1588 QKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQE 1667
Cdd:PRK02224 263 LRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNE 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1668 TIDKLRGIVsektneisnmqKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSN 1747
Cdd:PRK02224 343 EAESLREDA-----------DDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAE 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1748 AKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIK----DQsltlsklEIENLNLAQKLHENLEEMKSVMKER 1823
Cdd:PRK02224 412 DFLEELREERDELREREAELEATLRTARERVEEAEALLEAGKcpecGQ-------PVEGSPHVETIEEDRERVEELEAEL 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1824 DNLRRVEETLKLERDQLkESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKK 1903
Cdd:PRK02224 485 EDLEEEVEEVEERLERA-EDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEA 563
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1904 IQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEAqnlsmqsvRMDNFQLTKKLHESLEEIrivaKERDELRRIKESL 1983
Cdd:PRK02224 564 EEEAEEAREEVAELNSKLAELKERIESLERIRTLLAA--------IADAEDEIERLREKREAL----AELNDERRERLAE 631
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462594594 1984 KMERdqfIATLREMIARDRQNhQVKPEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMDDHYECLNRL 2052
Cdd:PRK02224 632 KRER---KRELEAEFDEARIE-EAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEEL 696
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
964-1804 |
1.98e-10 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 66.92 E-value: 1.98e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 964 EQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKTIENQEELRLLGDELKKQQEIVAQEKNHAIKK 1043
Cdd:pfam02463 169 RKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRD 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1044 EGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLEL-AQKLNE 1122
Cdd:pfam02463 249 EQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKeKKKAEK 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1123 NYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQD 1202
Cdd:pfam02463 329 ELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQ 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1203 LEKSHTKLQEEIpVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTLariemERLRLNEKFQESQEEIKSLTKE 1282
Cdd:pfam02463 409 LLLELARQLEDL-LKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKL-----LKDELELKKSEDLLKETQLVKL 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1283 RDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKPK--------DSALLRIEIE 1354
Cdd:pfam02463 483 QEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAistaviveVSATADEVEE 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1355 MLGLSKRLQESHDEMKSVAKEKDDLQ-RLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLS 1433
Cdd:pfam02463 563 RQKLVRALTELPLGARKLRLLIPKLKlPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAK 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1434 EKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKM----LELTNR 1509
Cdd:pfam02463 643 AKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELkklkLEAEEL 722
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1510 LQESQEEIQIMIKEKEEmKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQK 1589
Cdd:pfam02463 723 LADRVQEAQDKINEELK-LLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEE 801
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1590 LNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETI 1669
Cdd:pfam02463 802 ELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEE 881
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1670 DKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAK 1749
Cdd:pfam02463 882 QKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEER 961
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*
gi 2462594594 1750 LQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLN 1804
Cdd:pfam02463 962 NKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETC 1016
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
758-1921 |
2.59e-10 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 66.35 E-value: 2.59e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 758 RLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEigktkddlattqsnykstdqefqnfktlhmdfeqkyKMVL 837
Cdd:pfam01576 2 RQEEEMQAKEEELQKVKERQQKAESELKELEKKHQQLCEE------------------------------------KNAL 45
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 838 EENERMNQEivnLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQ-----------LKEQLENRDSTLQTV 906
Cdd:pfam01576 46 QEQLQAETE---LCAEAEEMRARLAARKQELEEILHELESRLEEEEERSQQLQNekkkmqqhiqdLEEQLDEEEAARQKL 122
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 907 EREKTLITEKLQQTLEEVKTLTQEKDdlkqlqeSLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSK 986
Cdd:pfam01576 123 QLEKVTTEAKIKKLEEDILLLEDQNS-------KLSKERKLLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEER 195
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 987 ISEEVSRNLHMEENTGETKDEFQQktienqeelrlLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEveeklkeksq 1066
Cdd:pfam01576 196 LKKEEKGRQELEKAKRKLEGESTD-----------LQEQIAELQAQIAELRAQLAKKEEELQAALARLEE---------- 254
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1067 qlqeKQQQLLNVQEEMSEMQKKINEienLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFET 1146
Cdd:pfam01576 255 ----ETAQKNNALKKIRELEAQISE---LQEDLESERAARNKAEKQRRDLGEELEALKTELEDTLDTTAAQQELRSKREQ 327
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1147 ERDHLRGYIREIEATGLQTKEELKIAHIH-LKEHQETIDELRRsvsektaqiiNTQDLEKSHTKLQEEIPVLHEEQELLP 1225
Cdd:pfam01576 328 EVTELKKALEEETRSHEAQLQEMRQKHTQaLEELTEQLEQAKR----------NKANLEKAKQALESENAELQAELRTLQ 397
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1226 NVKEVSETQETMNELELLTEQSTTKDSttlariEMERLRLNEKFQESQEEIKSLTKERDNL--KTIKEALEVkhDQLKEH 1303
Cdd:pfam01576 398 QAKQDSEHKRKKLEGQLQELQARLSES------ERQRAELAEKLSKLQSELESVSSLLNEAegKNIKLSKDV--SSLESQ 469
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1304 IRETLAKIQEsQSKQEQSLNMKEKDNETTKiVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQ 1383
Cdd:pfam01576 470 LQDTQELLQE-ETRQKLNLSTRLRQLEDER-NSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALEEGK 547
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1384 EVLQSESDQLKENIKEIVAKHLETEEELKvahcclKEQEEtINELRVNLSEKETEISTIQKQleaindklQNKIQEIYEK 1463
Cdd:pfam01576 548 KRLQRELEALTQQLEEKAAAYDKLEKTKN------RLQQE-LDDLLVDLDHQRQLVSNLEKK--------QKKFDQMLAE 612
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1464 EeqfniKQISevqekvnelKQFKEHRKAKDSALQSIESKMLELTNRLQESQEeiqimikEKEEMKRVQEALQIERDQLKe 1543
Cdd:pfam01576 613 E-----KAIS---------ARYAEERDRAEAEAREKETRALSLARALEEALE-------AKEELERTNKQLRAEMEDLV- 670
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1544 NTKEIVAKMKESQEKEYQFLKmTAVNETQEKMCEIEHLKEQFETQKLNLE-------------------NIETENIRLTQ 1604
Cdd:pfam01576 671 SSKDDVGKNVHELERSKRALE-QQVEEMKTQLEELEDELQATEDAKLRLEvnmqalkaqferdlqardeQGEEKRRQLVK 749
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1605 ILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRgivsEKTNEIS 1684
Cdd:pfam01576 750 QVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQIDAANKGREEAVKQLKKLQAQMKDLQRELEEAR----ASRDEIL 825
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1685 NMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKD---LENSNAKLQEKIQELKANE 1761
Cdd:pfam01576 826 AQSKESEKKLKNLEAELLQLQEDLAASERARRQAQQERDELADEIASGASGKSALQDEkrrLEARIAQLEEELEEEQSNT 905
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1762 HQLitlkkdvNETQKK-VSEMEQLKKQIKDQSLTLSKLEienlNLAQKLHENLEEMKSVMKERDNlrrveetlkLERDQL 1840
Cdd:pfam01576 906 ELL-------NDRLRKsTLQVEQLTTELAAERSTSQKSE----SARQQLERQNKELKAKLQEMEG---------TVKSKF 965
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1841 KESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKED 1920
Cdd:pfam01576 966 KSSIAALEAKIAQLEEQLEQESRERQAANKLVRRTEKKLKEVLLQVEDERRHADQYKDQAEKGNSRMKQLKRQLEEAEEE 1045
|
.
gi 2462594594 1921 V 1921
Cdd:pfam01576 1046 A 1046
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1083-1883 |
2.81e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 66.20 E-value: 2.81e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1083 SEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIeatg 1162
Cdd:TIGR04523 33 TEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKI---- 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1163 lqtKEELKIAHIHLKEHQETIDELRRSVSEKTAQIIntqDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELEL 1242
Cdd:TIGR04523 109 ---NSEIKNDKEQKNKLEVELNKLEKQKKENKKNID---KFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEK 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1243 LTEQSTTKDsttlarIEMERLRLNEKF---QESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQE 1319
Cdd:TIGR04523 183 LNIQKNIDK------IKNKLLKLELLLsnlKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLN 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1320 QSLNMKEKDNEttkivsemeQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDdlqrlqevlQSESDQLKENIKE 1399
Cdd:TIGR04523 257 QLKDEQNKIKK---------QLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKE---------QDWNKELKSELKN 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1400 IVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQnkiqeiyekeeqfniKQISEVQEKV 1479
Cdd:TIGR04523 319 QEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIE---------------KLKKENQSYK 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1480 NELKQFKehrkakdSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKmKESQEKE 1559
Cdd:TIGR04523 384 QEIKNLE-------SQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQ-DSVKELI 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1560 YQFLKMTavnetqekmceIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKE 1639
Cdd:TIGR04523 456 IKNLDNT-----------RESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKE 524
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1640 NLRETITRDLEKQEELKIVHMHLKEHQETIDK--LRGIVSEKTNEISnmqkDLEHSNDALKAQDLKIQEELriahmhlKE 1717
Cdd:TIGR04523 525 KIEKLESEKKEKESKISDLEDELNKDDFELKKenLEKEIDEKNKEIE----ELKQTQKSLKKKQEEKQELI-------DQ 593
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1718 QQETIDKLRGIVSEKTDKLSNMQKDLENSNAKlqekiqelkaNEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSK 1797
Cdd:TIGR04523 594 KEKEKKDLIKEIEEKEKKISSLEKELEKAKKE----------NEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPE 663
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1798 LEIENLNLAQKLHENLEEMKSVMKErDNLRRVEETLKLERDQLKESLQEtkaRDLEIQQELKTARMLSKEHKETVDKLRE 1877
Cdd:TIGR04523 664 IIKKIKESKTKIDDIIELMKDWLKE-LSLHYKKYITRMIRIKDLPKLEE---KYKEIEKELKKLDEFSKELENIIKNFNK 739
|
....*.
gi 2462594594 1878 KISEKT 1883
Cdd:TIGR04523 740 KFDDAF 745
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
650-1884 |
3.07e-10 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 66.23 E-value: 3.07e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 650 ELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKltsLIDGKVPKDLLcNLELEGKITDLQK-- 727
Cdd:TIGR01612 541 EIEAGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEKEIKDLFDKYLE---IDDEIIYINKL-KLELKEKIKNISDkn 616
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 728 -------ELNKEVEENEALREEVILLSELKsLPSEVERLRKEIQD-KSEELHIITSEKDKLFSEVvhkESRVQGLLEEIG 799
Cdd:TIGR01612 617 eyikkaiDLKKIIENNNAYIDELAKISPYQ-VPEHLKNKDKIYSTiKSELSKIYEDDIDALYNEL---SSIVKENAIDNT 692
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 800 KTKDDLATTQSNYKSTDQEFQNFKTlhmdfeQKYKMVLEENERMNQEIVNLSKEAQKFdsSLGALKTELSYKTQELQEKT 879
Cdd:TIGR01612 693 EDKAKLDDLKSKIDKEYDKIQNMET------ATVELHLSNIENKKNELLDIIVEIKKH--IHGEINKDLNKILEDFKNKE 764
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 880 REVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKtltQEKDDLKQLQESLQIERDQLKSDIHDTVNMN 959
Cdd:TIGR01612 765 KELSNKINDYAKEKDELNKYKSKISEIKNHYNDQINIDNIKDEDAK---QNYDKSKEYIKTISIKEDEIFKIINEMKFMK 841
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 960 IDTQEQLRNALESLKQHQETINTLKSKISEEVSRnlhmeeNTGETKDEFQQKTIENQEELRLLGDELKKQQEIVAQEKNh 1039
Cdd:TIGR01612 842 DDFLNKVDKFINFENNCKEKIDSEHEQFAELTNK------IKAEISDDKLNDYEKKFNDSKSLINEINKSIEEEYQNIN- 914
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1040 AIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKI-----NEIENLKNELKN--KELTLEHMETE 1112
Cdd:TIGR01612 915 TLKKVDEYIKICENTKESIEKFHNKQNILKEILNKNIDTIKESNLIEKSYkdkfdNTLIDKINELDKafKDASLNDYEAK 994
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1113 RLELAQKLNeNYEEVKSITKERKvlkeLQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLkehQETIDELRRSVSe 1192
Cdd:TIGR01612 995 NNELIKYFN-DLKANLGKNKENM----LYHQFDEKEKATNDIEQKIEDANKNIPNIEIAIHTSI---YNIIDEIEKEIG- 1065
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1193 KTAQIINTQDLEKSHTKLQeeipvlheeqellpNVKEVSETQETMNELELLTEQStTKDSTTLARIEMERLRLNEKFQES 1272
Cdd:TIGR01612 1066 KNIELLNKEILEEAEINIT--------------NFNEIKEKLKHYNFDDFGKEEN-IKYADEINKIKDDIKNLDQKIDHH 1130
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1273 QEEIKSLTKERDN----LKTIKEALEVKHDQL--KEHIRETLAKIQESQSKQEQSLNMKEkdnETTKIVSEMEQFKPKDS 1346
Cdd:TIGR01612 1131 IKALEEIKKKSENyideIKAQINDLEDVADKAisNDDPEEIEKKIENIVTKIDKKKNIYD---EIKKLLNEIAEIEKDKT 1207
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1347 ALLRIEIEMLGLSKRL------------QESHDEMKSVAKEKDDLQRLQEvlQSESDQLKENIKEIVAKHLET----EEE 1410
Cdd:TIGR01612 1208 SLEEVKGINLSYGKNLgklflekideekKKSEHMIKAMEAYIEDLDEIKE--KSPEIENEMGIEMDIKAEMETfnisHDD 1285
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1411 LKVAHCCLKEQEETINELRvNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIkQISEVQEKVNELKQFKehrk 1490
Cdd:TIGR01612 1286 DKDHHIISKKHDENISDIR-EKSLKIIEDFSEESDINDIKKELQKNLLDAQKHNSDINL-YLNEIANIYNILKLNK---- 1359
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1491 akdsaLQSIESKMLELTNRLQESQEEIQIMIKEKEEM-KRVQEALQIERDQLK-ENT---KEIVAKMKESQEKEYQFLKM 1565
Cdd:TIGR01612 1360 -----IKKIIDEVKEYTKEIEENNKNIKDELDKSEKLiKKIKDDINLEECKSKiESTlddKDIDECIKKIKELKNHILSE 1434
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1566 TAVNETQEKmceieHLKEQFETQKLNLENIETENIRLTQILHenlEEMRSVTKERDdlrsveetlkVERDQLKENLRETI 1645
Cdd:TIGR01612 1435 ESNIDTYFK-----NADENNENVLLLFKNIEMADNKSQHILK---IKKDNATNDHD----------FNINELKEHIDKSK 1496
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1646 TRDLEKQEELKivhmHLKEHQETIDKLRGIVSEKTNEISNMQkdLEHSNDALKAQDLKIQEELRIAHMHLKEQQETID-K 1724
Cdd:TIGR01612 1497 GCKDEADKNAK----AIEKNKELFEQYKKDVTELLNKYSALA--IKNKFAKTKKDSEIIIKEIKDAHKKFILEAEKSEqK 1570
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1725 LRGIVSEKTDKLSNMQKDLENSNA--KLQEKIQELKANEHQLITLKKDVNETQKkvsEMEQLKKQIKDQSLTLSKLEI-- 1800
Cdd:TIGR01612 1571 IKEIKKEKFRIEDDAAKNDKSNKAaiDIQLSLENFENKFLKISDIKKKINDCLK---ETESIEKKISSFSIDSQDTELke 1647
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1801 --ENLNLAQKLHENLEEMKSVM----KERDNLRRVEETLKLERDQLKeslqetKARDLEIQQELKTARMLSKEHKETVDK 1874
Cdd:TIGR01612 1648 ngDNLNSLQEFLESLKDQKKNIedkkKELDELDSEIEKIEIDVDQHK------KNYEIGIIEKIKEIAIANKEEIESIKE 1721
|
1290
....*....|
gi 2462594594 1875 LREKISEKTI 1884
Cdd:TIGR01612 1722 LIEPTIENLI 1731
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
559-1298 |
3.82e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 65.43 E-value: 3.82e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 559 LKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSqKLENIKmdlsYSLESIEDPKQMKQTLFDAETValdak 638
Cdd:TIGR04523 24 YKNIANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNK-DEEKIN----NSNNKIKILEQQIKDLNDKLKK----- 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 639 rESAFLRSENLELKEKMKELATTYKQM---ENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCN 715
Cdd:TIGR04523 94 -NKDKINKLNSDLSKINSEIKNDKEQKnklEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELE 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 716 LELEGKITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLL 795
Cdd:TIGR04523 173 NELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQ 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 796 EEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQeivnlskeaQKFDSSLGALKTELSYKTQEL 875
Cdd:TIGR04523 253 TQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNN---------QKEQDWNKELKSELKNQEKKL 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 876 QEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDT 955
Cdd:TIGR04523 324 EEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQ 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 956 VNMNIDTQEQLRNALESLKQHQETINTLKSKISEEVS--RNLHMEENTGETK-DEFQQKTIENQEELRLLGDELKKQQEI 1032
Cdd:TIGR04523 404 EKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSeiKDLTNQDSVKELIiKNLDNTRESLETQLKVLSRSINKIKQN 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1033 VAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNkELTLEHMETE 1112
Cdd:TIGR04523 484 LEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDF-ELKKENLEKE 562
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1113 RLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSE 1192
Cdd:TIGR04523 563 IDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNK 642
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1193 KTAQIINTQDLEKSHTKLQEEIpvLHEEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTlariEMERLRLNEKFQES 1272
Cdd:TIGR04523 643 LKQEVKQIKETIKEIRNKWPEI--IKKIKESKTKIDDIIELMKDWLKELSLHYKKYITRMIR----IKDLPKLEEKYKEI 716
|
730 740
....*....|....*....|....*.
gi 2462594594 1273 QEEIKSLTKERDNLKTIKEALEVKHD 1298
Cdd:TIGR04523 717 EKELKKLDEFSKELENIIKNFNKKFD 742
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1419-2196 |
3.96e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 65.93 E-value: 3.96e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1419 KEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQE--KVNELKQFKEHRKAKDsAL 1496
Cdd:PTZ00121 1086 DNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEarKAEDAKRVEIARKAED-AR 1164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1497 QSIESKMLELTNRLQESQEEIQImiKEKEEMKRVQEALQIERDQLKENTKEIV-AKMKESQEKEYQFLKMTAVNETQEKM 1575
Cdd:PTZ00121 1165 KAEEARKAEDAKKAEAARKAEEV--RKAEELRKAEDARKAEAARKAEEERKAEeARKAEDAKKAEAVKKAEEAKKDAEEA 1242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1576 CEIEHLKEQFETQKLNLENIETENIRLTQILHE---NLEEMRSVTKER--DDLRSVEETLKVERDQLKENLRETITRDLE 1650
Cdd:PTZ00121 1243 KKAEEERNNEEIRKFEEARMAHFARRQAAIKAEearKADELKKAEEKKkaDEAKKAEEKKKADEAKKKAEEAKKADEAKK 1322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1651 KQEELKIVHMHLKEHQETIDKLRGIvseKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLK--EQQETIDKLRGI 1728
Cdd:PTZ00121 1323 KAEEAKKKADAAKKKAEEAKKAAEA---AKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKkaEEKKKADEAKKK 1399
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1729 VSEKTDKLSNMQKdlensNAKLQEKIQELKANEHQlitlKKDVNETQKKVSE---MEQLKKQIKDqsltlsKLEIENLNL 1805
Cdd:PTZ00121 1400 AEEDKKKADELKK-----AAAAKKKADEAKKKAEE----KKKADEAKKKAEEakkADEAKKKAEE------AKKAEEAKK 1464
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1806 AQKLHENLEEMKSVMKER---DNLRRVEETLKLERDQLKESLQETK-ARDLEIQQELKTARMLSK-EHKETVDKLREkiS 1880
Cdd:PTZ00121 1465 KAEEAKKADEAKKKAEEAkkaDEAKKKAEEAKKKADEAKKAAEAKKkADEAKKAEEAKKADEAKKaEEAKKADEAKK--A 1542
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1881 EKTIQISDIQKDLDKSKDELQKKIQELQKKElqllrvkEDVNMSHKKINEMEQL-KKQFEAQNLSMQSVRMDNFQLTKKL 1959
Cdd:PTZ00121 1543 EEKKKADELKKAEELKKAEEKKKAEEAKKAE-------EDKNMALRKAEEAKKAeEARIEEVMKLYEEEKKMKAEEAKKA 1615
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1960 HESLEEIRIVAKERDELRRIKESLKMERDQfiatlremiarDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKRY 2039
Cdd:PTZ00121 1616 EEAKIKAEELKKAEEEKKKVEQLKKKEAEE-----------KKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAE 1684
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2040 SEMDDHYECLNRLSLDLEKEIEFQKELSMRVKanlslpylqtkhieklfTANQRCSMEFHRIMKklkyvlsyVTKIKEEQ 2119
Cdd:PTZ00121 1685 EDEKKAAEALKKEAEEAKKAEELKKKEAEEKK-----------------KAEELKKAEEENKIK--------AEEAKKEA 1739
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462594594 2120 HESINKFEMDFIDEVEKQKellikIQHLQQDCDVPSRELRDLKlnqnmDLHIEEILKDFSESEFPSIKTEFQQVLSN 2196
Cdd:PTZ00121 1740 EEDKKKAEEAKKDEEEKKK-----IAHLKKEEEKKAEEIRKEK-----EAVIEEELDEEDEKRRMEVDKKIKDIFDN 1806
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1695-1911 |
6.02e-10 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 64.01 E-value: 6.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1695 DALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNET 1774
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQ 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1775 QKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKER-DNLRRVEETLKLERDQLKESLQETKARDLE 1853
Cdd:COG4942 103 KEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQaEELRADLAELAALRAELEAERAELEALLAE 182
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 2462594594 1854 IQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDldksKDELQKKIQELQKKE 1911
Cdd:COG4942 183 LEEERAALEALKAERQKLLARLEKELAELAAELAELQQE----AEELEALIARLEAEA 236
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1366-2194 |
6.38e-10 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 64.99 E-value: 6.38e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1366 HDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQ 1445
Cdd:pfam02463 158 IEEEAAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEE 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1446 LEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKE 1525
Cdd:pfam02463 238 RIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLK 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1526 EMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAvNETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQI 1605
Cdd:pfam02463 318 ESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEE-ELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEE 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1606 LHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEKTNEISN 1685
Cdd:pfam02463 397 LELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKE 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1686 MQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQ------------EK 1753
Cdd:pfam02463 477 TQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKvaistavivevsAT 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1754 IQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETL 1833
Cdd:pfam02463 557 ADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTK 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1834 KLERDQLKES-LQETKARDLEIQQELKTARMLSKEHKETVDKLREK--------ISEKTIQISDIQKDLDKSKDELQKKI 1904
Cdd:pfam02463 637 LKESAKAKESgLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQekaeselaKEEILRRQLEIKKKEQREKEELKKLK 716
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1905 QELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIRIVAKERDELRRIKESLK 1984
Cdd:pfam02463 717 LEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKL 796
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1985 MERDQFI-ATLREMIARDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMDDHYECLNRLSLDLEKEIEFQ 2063
Cdd:pfam02463 797 KAQEEELrALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKE 876
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2064 KELS-MRVKANLSLPYLQTKHIEKLFTANQRCSMEFHRIMKKLKYVLSYVTKIKEEQHESINKFEMDFIDEVEKQKELLI 2142
Cdd:pfam02463 877 EELEeQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKE 956
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|..
gi 2462594594 2143 KIQHLQQDCDVPSRELRDLKLNQNMDLHIEEILKDFSESEFPSIKTEFQQVL 2194
Cdd:pfam02463 957 EEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLI 1008
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1266-2144 |
7.43e-10 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 64.99 E-value: 7.43e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1266 NEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKPKD 1345
Cdd:pfam02463 151 KPERRLEIEEEAAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLD 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1346 sallrieiEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETI 1425
Cdd:pfam02463 231 --------YLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSEL 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1426 NELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKdSALQSIESKMLE 1505
Cdd:pfam02463 303 LKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLE-QLEEELLAKKKL 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1506 LTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLkmtavnETQEKMCEIEHLKEQF 1585
Cdd:pfam02463 382 ESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESI------ELKQGKLTEEKEELEK 455
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1586 ETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEH 1665
Cdd:pfam02463 456 QELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLG 535
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1666 QETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLEN 1745
Cdd:pfam02463 536 VAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEA 615
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1746 SNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLhENLEEMKSVMKERDN 1825
Cdd:pfam02463 616 DEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQ-ELQEKAESELAKEEI 694
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1826 LRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQ 1905
Cdd:pfam02463 695 LRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEK 774
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1906 ELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIRIVAKERDEL--RRIKESL 1983
Cdd:pfam02463 775 ELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEqkLEKLAEE 854
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1984 KMERDQFIATLREMIARDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMDDHYECLNRLSLDLEKEIEFQ 2063
Cdd:pfam02463 855 ELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYE 934
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2064 KELSMRVKANLSLPYLQTKHIEKLFTANQRCSMEFhrimKKLKYVLSYVTKIKEEQHESINKFEMDFIDEVEKQKELLIK 2143
Cdd:pfam02463 935 EEPEELLLEEADEKEKEENNKEEEEERNKRLLLAK----EELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRA 1010
|
.
gi 2462594594 2144 I 2144
Cdd:pfam02463 1011 I 1011
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1356-1559 |
2.23e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 62.09 E-value: 2.23e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1356 LGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEK 1435
Cdd:COG4942 9 LLLALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAEL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1436 ETEISTIQKQLEAINDKLQNKIQEIYEKEEQ------FNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNR 1509
Cdd:COG4942 89 EKEIAELRAELEAQKEELAELLRALYRLGRQpplallLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAE 168
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2462594594 1510 LQESQEEIQIMIKEKEEMKRVQEALQIERDQ-LKENTKEIVAKMKESQEKE 1559
Cdd:COG4942 169 LEAERAELEALLAELEEERAALEALKAERQKlLARLEKELAELAAELAELQ 219
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1358-1933 |
2.32e-09 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 63.00 E-value: 2.32e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1358 LSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVahccLKEQEETINELRVNLSEKET 1437
Cdd:PRK01156 188 LEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNE----LSSLEDMKNRYESEIKTAES 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1438 EISTIQKQLEAINDkLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELtnrlqesqEEI 1517
Cdd:PRK01156 264 DLSMELEKNNYYKE-LEERHMKIINDPVYKNRNYINDYFKYKNDIENKKQILSNIDAEINKYHAIIKKL--------SVL 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1518 QIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKEsqekeyqflkmtavnetqekmceIEHLKEQFETQKLNLENIET 1597
Cdd:PRK01156 335 QKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKS-----------------------IESLKKKIEEYSKNIERMSA 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1598 ENIRLTQILHENLEEMRSVTKE----RDDLRSVEETLKVERDQLKENLREtITRD---LEKQEELKIVHMHLKEhqetiD 1670
Cdd:PRK01156 392 FISEILKIQEIDPDAIKKELNEinvkLQDISSKVSSLNQRIRALRENLDE-LSRNmemLNGQSVCPVCGTTLGE-----E 465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1671 KLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIqeelriahmhlKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKL 1750
Cdd:PRK01156 466 KSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKI-----------VDLKKRKEYLESEEINKSINEYNKIESARADLEDI 534
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1751 QEKIQELKANEHQLITLKKDVNETqkKVSEMEQLKKQIKDQSLTLSKLEIENL------------NLAQKLHENLEEMKS 1818
Cdd:PRK01156 535 KIKINELKDKHDKYEEIKNRYKSL--KLEDLDSKRTSWLNALAVISLIDIETNrsrsneikkqlnDLESRLQEIEIGFPD 612
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1819 VMKERDN-LRRVEETLKLERDQLKEsLQETKARDLEIQQELKTARMLSKEHKETVDKLrekiSEKTIQISDIQKDLDKSK 1897
Cdd:PRK01156 613 DKSYIDKsIREIENEANNLNNKYNE-IQENKILIEKLRGKIDNYKKQIAEIDSIIPDL----KEITSRINDIEDNLKKSR 687
|
570 580 590
....*....|....*....|....*....|....*.
gi 2462594594 1898 DELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQ 1933
Cdd:PRK01156 688 KALDDAKANRARLESTIEILRTRINELSDRINDINE 723
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
660-1333 |
2.96e-09 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 62.73 E-value: 2.96e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 660 TTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDG--KVPKDLLCNLELEG-KITDLQKELNKEVEEN 736
Cdd:TIGR04523 33 TEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKIleQQIKDLNDKLKKNKdKINKLNSDLSKINSEI 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 737 EALREEVILL-SELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKST 815
Cdd:TIGR04523 113 KNDKEQKNKLeVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKI 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 816 DQEFQNFKTLHMDFEQKykmvLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQ 895
Cdd:TIGR04523 193 KNKLLKLELLLSNLKKK----IQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQ 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 896 LENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDdlkqlqeslQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQ 975
Cdd:TIGR04523 269 LSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKE---------QDWNKELKSELKNQEKKLEEIQNQISQNNKIISQ 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 976 HQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKTIENQ---EELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCD 1052
Cdd:TIGR04523 340 LNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQsykQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQ 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1053 RLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNK----ELTLEHMETERLELAQKLNENYEEVK 1128
Cdd:TIGR04523 420 EKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQlkvlSRSINKIKQNLEQKQKELKSKEKELK 499
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1129 SITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKiahiHLKEHQETIDelrrsvsektaQIINTQDLEKSHT 1208
Cdd:TIGR04523 500 KLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKIS----DLEDELNKDD-----------FELKKENLEKEID 564
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1209 KLQEEIPVLHEEQELLPNvkevseTQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKT 1288
Cdd:TIGR04523 565 EKNKEIEELKQTQKSLKK------KQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKS 638
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 2462594594 1289 IKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTK 1333
Cdd:TIGR04523 639 KKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTKIDDIIELMK 683
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1709-2067 |
3.94e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 62.39 E-value: 3.94e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1709 RIAHMHLKEQQETIDKLRGIvsektdklsnmqKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEmEQLKKqI 1788
Cdd:TIGR02169 146 DFISMSPVERRKIIDEIAGV------------AEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRR-EREKA-E 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1789 KDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRveetlklERDQLKESLQETKARDLEIQQELKT-ARMLSKE 1867
Cdd:TIGR02169 212 RYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEE-------ELEKLTEEISELEKRLEEIEQLLEElNKKIKDL 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1868 HKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEAQNLSMQS 1947
Cdd:TIGR02169 285 GEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKE 364
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1948 VRMDNFQ----LTKKLHESLEEIRIVAKERDELRRIKESLKMERDQFIATLREMIARDRQNHQ----VKPEKRLLSDGQQ 2019
Cdd:TIGR02169 365 ELEDLRAeleeVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAaiagIEAKINELEEEKE 444
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2462594594 2020 HLTESLREKCSRIKELLKRYSEMDDHYECLNRLSLDLEKEI-EFQKELS 2067
Cdd:TIGR02169 445 DKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELsKLQRELA 493
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
601-1601 |
7.66e-09 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 61.60 E-value: 7.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 601 QKLENIKMDLSYSLESIEDPKQMKQTLFDAETVALDAKRESAFLRSENLELKEKMKELA---TTYKQMENDIQLYQSQLE 677
Cdd:TIGR00606 200 QKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEhnlSKIMKLDNEIKALKSRKK 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 678 AKKKMQVDLEKELQSAFNEItkltslidgkvpkdllcnlelEGKITDLQKELNKEVEENEalreevillSELKSLPSEVE 757
Cdd:TIGR00606 280 QMEKDNSELELKMEKVFQGT---------------------DEQLNDLYHNHQRTVREKE---------RELVDCQRELE 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 758 RLRKEIQDKSEELHIITSE--KDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKStDQEFQNFKTLHMD-FEQKYK 834
Cdd:TIGR00606 330 KLNKERRLLNQEKTELLVEqgRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPFS-ERQIKNFHTLVIErQEDEAK 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 835 MVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLK---EQLENRDSTLQTVEREKT 911
Cdd:TIGR00606 409 TAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEgssDRILELDQELRKAERELS 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 912 LITEK--LQQTLEEVKTLTQEKDDLKQLQESLQIERDQLksdihdtvNMNIDTQEQLRNALESLKQHQETINTLKSKISE 989
Cdd:TIGR00606 489 KAEKNslTETLKKEVKSLQNEKADLDRKLRKLDQEMEQL--------NHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSD 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 990 EVSRNLHMEENTGETKDEFQQKTIE---NQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQ 1066
Cdd:TIGR00606 561 ELTSLLGYFPNKKQLEDWLHSKSKEinqTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEESD 640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1067 QLQEKQQQLLNvQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITK----ERKVLKELQK 1142
Cdd:TIGR00606 641 LERLKEEIEKS-SKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRlapdKLKSTESELK 719
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1143 SFETERDHLRGYIrEIEATGLQTKEElkiahiHLKEHQETIDELRRSVSEKtaqiinTQDLEKSHTKLQEEIPVLHEEQE 1222
Cdd:TIGR00606 720 KKEKRRDEMLGLA-PGRQSIIDLKEK------EIPELRNKLQKVNRDIQRL------KNDIEEQETLLGTIMPEEESAKV 786
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1223 LLPNVKEVSETQETMNELELLTEQSTTK-DSTTLARIEMErlrLNEKFQESQEEIKSLTKERDNLKTIKE-------ALE 1294
Cdd:TIGR00606 787 CLTDVTIMERFQMELKDVERKIAQQAAKlQGSDLDRTVQQ---VNQEKQEKQHELDTVVSKIELNRKLIQdqqeqiqHLK 863
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1295 VKHDQLKEHIRETLAKIQESQSKQEQSLnmkEKDNETTKIVSEMEQFKPKDSALLRIeiemlgLSKRLQESHDEMKSVAK 1374
Cdd:TIGR00606 864 SKTNELKSEKLQIGTNLQRRQQFEEQLV---ELSTEVQSLIREIKDAKEQDSPLETF------LEKDQQEKEELISSKET 934
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1375 EKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKvahcclKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQ 1454
Cdd:TIGR00606 935 SNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDYL------KQKETELNTVNAQLEECEKHQEKINEDMRLMRQDID 1008
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1455 -NKIQEIYEKEEQFNIKQISEVQEKVNELKQF-KEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQE 1532
Cdd:TIGR00606 1009 tQKIQERWLQDNLTLRKRENELKEVEEELKQHlKEMGQMQVLQMKQEHQKLEENIDLIKRNHVLALGRQKGYEKEIKHFK 1088
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462594594 1533 ALQIERD--QLKENTKEIVAKMKESQE------KEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIR 1601
Cdd:TIGR00606 1089 KELREPQfrDAEEKYREMMIVMRTTELvnkdldIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIR 1165
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
873-1319 |
7.68e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 61.59 E-value: 7.68e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 873 QELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDD--------------LKQLQ 938
Cdd:PRK02224 237 DEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDllaeaglddadaeaVEARR 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 939 ESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEVSRnlhmEENTGETKDEFQQKTIENQEE 1018
Cdd:PRK02224 317 EELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESE----LEEAREAVEDRREEIEELEEE 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1019 LRLLG----------DELKKQQEIVAQEKNHAIKKEGELSRTC----DRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSE 1084
Cdd:PRK02224 393 IEELRerfgdapvdlGNAEDFLEELREERDELREREAELEATLrtarERVEEAEALLEAGKCPECGQPVEGSPHVETIEE 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1085 MQKKINEIENLKNELKNKELTLEhmetERLELAQKLNENYEEVKSITKERKVLKEL--QKSFETERDH-----LRGYIRE 1157
Cdd:PRK02224 473 DRERVEELEAELEDLEEEVEEVE----ERLERAEDLVEAEDRIERLEERREDLEELiaERRETIEEKReraeeLRERAAE 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1158 IEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVS-ETQET 1236
Cdd:PRK02224 549 LEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRTLLAAIADAEDEIERLREKREALAELNdERRER 628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1237 MNEL-ELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEhIRETLAKIQESQ 1315
Cdd:PRK02224 629 LAEKrERKRELEAEFDEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEE-LRERREALENRV 707
|
....
gi 2462594594 1316 SKQE 1319
Cdd:PRK02224 708 EALE 711
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1715-1913 |
8.91e-09 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 60.23 E-value: 8.91e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1715 LKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSE-MEQLKKQIKD--- 1790
Cdd:COG3883 18 IQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEErREELGERARAlyr 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1791 QSLTLSKLEIenLNLAQKLHENLEEMKSVMKERDNLRRVEETLKlerdQLKESLQETKARDLEIQQELKTARMLSKEHKE 1870
Cdd:COG3883 98 SGGSVSYLDV--LLGSESFSDFLDRLSALSKIADADADLLEELK----ADKAELEAKKAELEAKLAELEALKAELEAAKA 171
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2462594594 1871 TVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQ 1913
Cdd:COG3883 172 ELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAA 214
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
546-895 |
1.31e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 60.85 E-value: 1.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 546 KDQEMQLIHEISNLKNLVKHAEVYNQDLENELSskvelLREKEDQIKKLQEYIDSQKLENIKMDLSYSLESIEDPKQMKQ 625
Cdd:TIGR02169 687 KRELSSLQSELRRIENRLDELSQELSDASRKIG-----EIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELK 761
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 626 TLfDAETVALDAKRESAFLRSENLELKEKMKELATTYKQMEnDIQLYQSQLEAKKKmqvDLEKELQSAFNEITKLTSLID 705
Cdd:TIGR02169 762 EL-EARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELS-KLEEEVSRIEARLR---EIEQKLNRLTLEKEYLEKEIQ 836
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 706 GKVPKdllcNLELEGKITDLQKE---LNKEVEENEALREEviLLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFS 782
Cdd:TIGR02169 837 ELQEQ----RIDLKEQIKSIEKEienLNGKKEELEEELEE--LEAALRDLESRLGDLKKERDELEAQLRELERKIEELEA 910
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 783 EVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNfktlHMDFEQKYKMVLEENERMNQ-EIVNLsKEAQKFDSSL 861
Cdd:TIGR02169 911 QIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEE----ELSLEDVQAELQRVEEEIRAlEPVNM-LAIQEYEEVL 985
|
330 340 350
....*....|....*....|....*....|....
gi 2462594594 862 GALKtELSYKTQELQEKTREVQERLNEMEQLKEQ 895
Cdd:TIGR02169 986 KRLD-ELKEKRAKLEEERKAILERIEEYEKKKRE 1018
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
747-1518 |
1.36e-08 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 60.75 E-value: 1.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 747 SELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLH 826
Cdd:TIGR00618 163 KEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSH 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 827 MDFEQKYKMvLEENERMNQEIVNLSKEAQKFDSSLGALktELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTV 906
Cdd:TIGR00618 243 AYLTQKREA-QEEQLKKQQLLKQLRARIEELRAQEAVL--EETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSK 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 907 EREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQlksdiHDTVNMNIDTQEQLRNALESLKQHQETINTLKSK 986
Cdd:TIGR00618 320 MRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDA-----HEVATSIREISCQQHTLTQHIHTLQQQKTTLTQK 394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 987 ISEEVSRNLHMEENTGETKDEFQQKTIENQEELRLLGDElKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQ 1066
Cdd:TIGR00618 395 LQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQ-ELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQ 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1067 QLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEhmetERLELAQKLNENYEEVKSITKERKVLKELQKSFET 1146
Cdd:TIGR00618 474 QLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPN----PARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYH 549
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1147 ERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIintQDLEKSHTKLQEEIPVLHEEQELLPN 1226
Cdd:TIGR00618 550 QLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLT---EKLSEAEDMLACEQHALLRKLQPEQD 626
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1227 VKEVSETQETMNELELLTEQSTTKDSTTLA--RIEMERLRLNE-----------KFQESQEEIKSLTKERDNLKTIKEAL 1293
Cdd:TIGR00618 627 LQDVRLHLQQCSQELALKLTALHALQLTLTqeRVREHALSIRVlpkellasrqlALQKMQSEKEQLTYWKEMLAQCQTLL 706
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1294 EVKHDQLKEHIREtLAKIQESQSKQEQSLNMKEkDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVA 1373
Cdd:TIGR00618 707 RELETHIEEYDRE-FNEIENASSSLGSDLAARE-DALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLA 784
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1374 KEKDDLQRLQEVLQSESDQLKENIKEiVAKHLETEEELKVaHCCLKEQEETINELRVNlSEKETEISTIQKQLEAINDKL 1453
Cdd:TIGR00618 785 AEIQFFNRLREEDTHLLKTLEAEIGQ-EIPSDEDILNLQC-ETLVQEEEQFLSRLEEK-SATLGEITHQLLKYEECSKQL 861
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462594594 1454 QNKIQEiyekeeqfnIKQISEVQEKVNELKQFKEHRKAkdSALQSIESKMLELTNRLQESQEEIQ 1518
Cdd:TIGR00618 862 AQLTQE---------QAKIIQLSDKLNGINQIKIQFDG--DALIKFLHEITLYANVRLANQSEGR 915
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
881-1523 |
1.96e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 60.03 E-value: 1.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 881 EVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKqlqESLQIERDQLKSDIHDTVNMN- 959
Cdd:TIGR04523 34 EEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLN---DKLKKNKDKINKLNSDLSKINs 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 960 -IDTQEQLRNALE----SLKQHQETINTLKSKISEEVsRNLHMEENTGETKDEFQQKTIENQE-ELRLLGDELKKQQEIV 1033
Cdd:TIGR04523 111 eIKNDKEQKNKLEvelnKLEKQKKENKKNIDKFLTEI-KKKEKELEKLNNKYNDLKKQKEELEnELNLLEKEKLNIQKNI 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1034 AQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETER 1113
Cdd:TIGR04523 190 DKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQL 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1114 LELAQKLNENYEEVKSITKERKVLKELQKSFETERDhlRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVS-- 1191
Cdd:TIGR04523 270 SEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKE--QDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISql 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1192 --EKTAQIINTQDLEKSHTKLQEEIPVLHEEQE--LLPNVKEVSETQETMNELELLTEQSTTKDS------TTLARIEME 1261
Cdd:TIGR04523 348 kkELTNSESENSEKQRELEEKQNEIEKLKKENQsyKQEIKNLESQINDLESKIQNQEKLNQQKDEqikklqQEKELLEKE 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1262 RLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQslnmkekdnettkivsemeqf 1341
Cdd:TIGR04523 428 IERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQ--------------------- 486
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1342 kpkdsallrieiemlgLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQ 1421
Cdd:TIGR04523 487 ----------------KQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKD 550
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1422 EETIN--ELRVNLSEKETEISTI---QKQLEAINDKLQNKIQEiYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSAL 1496
Cdd:TIGR04523 551 DFELKkeNLEKEIDEKNKEIEELkqtQKSLKKKQEEKQELIDQ-KEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKL 629
|
650 660
....*....|....*....|....*..
gi 2462594594 1497 QSIESKMLELTNRLQESQEEIQIMIKE 1523
Cdd:TIGR04523 630 SSIIKNIKSKKNKLKQEVKQIKETIKE 656
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
695-1192 |
2.29e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 60.05 E-value: 2.29e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 695 NEITKLTSLIDGKVPKDLLCNL-ELEGKITDLQKELnKEVEEN-----EALREEVILLSELKSLPSEVERLRKEIQDKSE 768
Cdd:PRK02224 187 GSLDQLKAQIEEKEEKDLHERLnGLESELAELDEEI-ERYEEQreqarETRDEADEVLEEHEERREELETLEAEIEDLRE 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 769 ELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLH-------MDFEQKYKMVLEENE 841
Cdd:PRK02224 266 TIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDeelrdrlEECRVAAQAHNEEAE 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 842 RMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTL 921
Cdd:PRK02224 346 SLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELR 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 922 EEVKTLTQekdDLKQLQESLQIERDQLK-------------SDIHDTVNMNIDTQEQLRNALESLKQHQET----INTLK 984
Cdd:PRK02224 426 EREAELEA---TLRTARERVEEAEALLEagkcpecgqpvegSPHVETIEEDRERVEELEAELEDLEEEVEEveerLERAE 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 985 S--KISEEVSRNLHMEENTGETKDEfQQKTIENQEELRLLGDELKKQQEIVAQEKNH-AIKKEGELSRTCDRLAEVEEKL 1061
Cdd:PRK02224 503 DlvEAEDRIERLEERREDLEELIAE-RRETIEEKRERAEELRERAAELEAEAEEKREaAAEAEEEAEEAREEVAELNSKL 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1062 KEksqqLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKElTLEHMETERL--------ELAQKLNENYEEVKSITKE 1133
Cdd:PRK02224 582 AE----LKERIESLERIRTLLAAIADAEDEIERLREKREALA-ELNDERRERLaekrerkrELEAEFDEARIEEAREDKE 656
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462594594 1134 R------KVLKELQKSFEtERDHLRGYIREIEATgLQTKEELKIAHIHLKEHQETIDELRRSVSE 1192
Cdd:PRK02224 657 RaeeyleQVEEKLDELRE-ERDDLQAEIGAVENE-LEELEELRERREALENRVEALEALYDEAEE 719
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1637-1983 |
1.12e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 57.76 E-value: 1.12e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1637 LKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRgIVSEKTNEISNMQKDLEHSNDALKAQDLK-IQEELRIAHMHL 1715
Cdd:TIGR02168 170 YKERRKETERKLERTRENLDRLEDILNELERQLKSLE-RQAEKAERYKELKAELRELELALLVLRLEeLREELEELQEEL 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1716 KEQQETIDKLRGIVSEKTDKLSnmqkDLENSNAKLQEKIQELKANEHQLITLKKDVNET-QKKVSEMEQLKKQIKDQSLT 1794
Cdd:TIGR02168 249 KEAEEELEELTAELQELEEKLE----ELRLEVSELEEEIEELQKELYALANEISRLEQQkQILRERLANLERQLEELEAQ 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1795 LSKLEIENLNLAQKLHENLEEMKSVMKERDNLRrveetlkLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDK 1874
Cdd:TIGR02168 325 LEELESKLDELAEELAELEEKLEELKEELESLE-------AELEELEAELEELESRLEELEEQLETLRSKVAQLELQIAS 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1875 LREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDvnmshKKINEMEQLKKQFEAQNLSMQSVRMDNFQ 1954
Cdd:TIGR02168 398 LNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELE-----ELEEELEELQEELERLEEALEELREELEE 472
|
330 340
....*....|....*....|....*....
gi 2462594594 1955 LTKKLHESLEEIRIVAKERDELRRIKESL 1983
Cdd:TIGR02168 473 AEQALDAAERELAQLQARLDSLERLQENL 501
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1219-1905 |
1.43e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 57.29 E-value: 1.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1219 EEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHD 1298
Cdd:TIGR00618 164 EKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHA 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1299 QLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQ--FKPKDSALLRIEIEMLGLSKRLQESHDEMKS-VAKE 1375
Cdd:TIGR00618 244 YLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERinRARKAAPLAAHIKAVTQIEQQAQRIHTELQSkMRSR 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1376 KDDLQRLQEVLQSESDQlkENIKEIVAKHLETEEELKVAHcclkEQEETINELRVNLSEKETEISTIQKQLEAINDKLQN 1455
Cdd:TIGR00618 324 AKLLMKRAAHVKQQSSI--EEQRRLLQTLHSQEIHIRDAH----EVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQS 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1456 KIQEI-YEKEEQFNI------------------KQISEVQEKVNELKQFKEHR----KAKDSALQSIESKMLELTNRLQE 1512
Cdd:TIGR00618 398 LCKELdILQREQATIdtrtsafrdlqgqlahakKQQELQQRYAELCAAAITCTaqceKLEKIHLQESAQSLKEREQQLQT 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1513 SQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEH--------LKEQ 1584
Cdd:TIGR00618 478 KEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEdvyhqltsERKQ 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1585 FETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKE-------------NLRETITRDLEK 1651
Cdd:TIGR00618 558 RASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACeqhallrklqpeqDLQDVRLHLQQC 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1652 QEELKIVHMHLKEHQETIDKLRgiVSEKTNEISNMQKDLEHSNDAL-------KAQDLKIQEELRIAHMHLKEQQETIDK 1724
Cdd:TIGR00618 638 SQELALKLTALHALQLTLTQER--VREHALSIRVLPKELLASRQLAlqkmqseKEQLTYWKEMLAQCQTLLRELETHIEE 715
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1725 LRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELkanEHQLITLKKDVNETQKKVSEMEQLKKQIKDQsltLSKLEIENLN 1804
Cdd:TIGR00618 716 YDREFNEIENASSSLGSDLAAREDALNQSLKEL---MHQARTVLKARTEAHFNNNEEVTAALQTGAE---LSHLAAEIQF 789
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1805 LAQKLHENLEEMKSVMKE-RDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETvdklREKISEKT 1883
Cdd:TIGR00618 790 FNRLREEDTHLLKTLEAEiGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEEC----SKQLAQLT 865
|
730 740
....*....|....*....|..
gi 2462594594 1884 IQISDIQKDLDKSKDELQKKIQ 1905
Cdd:TIGR00618 866 QEQAKIIQLSDKLNGINQIKIQ 887
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1369-1837 |
1.53e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 57.08 E-value: 1.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1369 MKSVAKEKDDLQRLQ----EVLQSESDQLKENIKEIVAKHLETEEELKVahccLKEQEETINELRVNLSEKETEISTIQK 1444
Cdd:COG4717 48 LERLEKEADELFKPQgrkpELNLKELKELEEELKEAEEKEEEYAELQEE----LEELEEELEELEAELEELREELEKLEK 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1445 QLEAIND-----KLQNKIQEIYEKEEQF--NIKQISEVQEKVNELKQfkEHRKAKDSALQSIESKMLELTNRLQESQEEI 1517
Cdd:COG4717 124 LLQLLPLyqeleALEAELAELPERLEELeeRLEELRELEEELEELEA--ELAELQEELEELLEQLSLATEEELQDLAEEL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1518 QIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEyQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIET 1597
Cdd:COG4717 202 EELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEE-RLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLF 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1598 ENIRLTQILHENLEEMRSV-TKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIv 1676
Cdd:COG4717 281 LVLGLLALLFLLLAREKASlGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEEL- 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1677 sEKTNEISNMQKDLEHSNDALKAQDLkiqEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQK-----DLENSNAKLQ 1751
Cdd:COG4717 360 -EEELQLEELEQEIAALLAEAGVEDE---EELRAALEQAEEYQELKEELEELEEQLEELLGELEEllealDEEELEEELE 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1752 EKIQELKANEHQLITLKKDVNETQKKVSEMEqlkkqikdQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEE 1831
Cdd:COG4717 436 ELEEELEELEEELEELREELAELEAELEQLE--------EDGELAELLQELEELKAELRELAEEWAALKLALELLEEARE 507
|
....*.
gi 2462594594 1832 TLKLER 1837
Cdd:COG4717 508 EYREER 513
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1091-1701 |
1.59e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 57.23 E-value: 1.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1091 EIENLKNELKNKELTLEHMET--ERLELAQKLNENYEEVKSITKERKVLKELQKSF-----ETERDHLRGYIREIEATGL 1163
Cdd:COG4913 226 AADALVEHFDDLERAHEALEDarEQIELLEPIRELAERYAAARERLAELEYLRAALrlwfaQRRLELLEAELEELRAELA 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1164 QTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINT-----QDLEKSHTKLQE------------EIPVLHEEQELLPN 1226
Cdd:COG4913 306 RLEAELERLEARLDALREELDELEAQIRGNGGDRLEQlereiERLERELEERERrrarleallaalGLPLPASAEEFAAL 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1227 VKEVSETQETMNELELLTEQsttkdstTLARIEMERLRLNEKFQESQEEIKSLTKERDNL--------KTIKEALEVKHD 1298
Cdd:COG4913 386 RAEAAALLEALEEELEALEE-------ALAEAEAALRDLRRELRELEAEIASLERRKSNIparllalrDALAEALGLDEA 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1299 QLK---EHIretlakiqesqskqeqslNMKEKDNE-------------TTKIVSEmEQFKpkdsALLRIeIEMLGLSKRL 1362
Cdd:COG4913 459 ELPfvgELI------------------EVRPEEERwrgaiervlggfaLTLLVPP-EHYA----AALRW-VNRLHLRGRL 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1363 --QESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHL-----ETEEELK----------------VAHCC-- 1417
Cdd:COG4913 515 vyERVRTGLPDPERPRLDPDSLAGKLDFKPHPFRAWLEAELGRRFdyvcvDSPEELRrhpraitragqvkgngTRHEKdd 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1418 ---LKEQ-------EETINELRVNLSEKETEISTIQKQLEAINDKLQN--KIQEIYEK--EEQFNIKQISEVQEKVNELK 1483
Cdd:COG4913 595 rrrIRSRyvlgfdnRAKLAALEAELAELEEELAEAEERLEALEAELDAlqERREALQRlaEYSWDEIDVASAEREIAELE 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1484 QFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAkmKESQEKEYQFL 1563
Cdd:COG4913 675 AELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAED--LARLELRALLE 752
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1564 KMTAVNETQEKMCEI-EHLKEQFETQKLNLENIETeniRLTQILHENLEEMRSVTKE-RDDLRSVEETLKvERDQLKENl 1641
Cdd:COG4913 753 ERFAAALGDAVERELrENLEERIDALRARLNRAEE---ELERAMRAFNREWPAETADlDADLESLPEYLA-LLDRLEED- 827
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462594594 1642 retitrDL-EKQEELKivhmHLKeHQETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQD 1701
Cdd:COG4913 828 ------GLpEYEERFK----ELL-NENSIEFVADLLSKLRRAIREIKERIDPLNDSLKRIP 877
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
728-1353 |
1.64e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 57.46 E-value: 1.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 728 ELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLAT 807
Cdd:PTZ00121 1333 AAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKK 1412
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 808 TQSNYKSTDQ------EFQNFKTLHMDFEQKYKM----VLEENERMNQEIVNLSKEAQKFDSSlgALKTELSYKTQELQE 877
Cdd:PTZ00121 1413 AAAAKKKADEakkkaeEKKKADEAKKKAEEAKKAdeakKKAEEAKKAEEAKKKAEEAKKADEA--KKKAEEAKKADEAKK 1490
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 878 KTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQT--LEEVKTLTQEK--DDLKQLQE---SLQIERDQLKS 950
Cdd:PTZ00121 1491 KAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAkkADEAKKAEEKKkaDELKKAEElkkAEEKKKAEEAK 1570
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 951 DIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGET--KDEFQQKTIEN----QEELRLLGD 1024
Cdd:PTZ00121 1571 KAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEElkKAEEEKKKVEQlkkkEAEEKKKAE 1650
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1025 ELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKEL 1104
Cdd:PTZ00121 1651 ELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKI 1730
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1105 TLEHMETERLELAQKLnenyEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKeelkiahihlkehqetiD 1184
Cdd:PTZ00121 1731 KAEEAKKEAEEDKKKA----EEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEE-----------------D 1789
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1185 ELRRSVSEKTaqiinTQDLEKSHTKLQE----EIPVLHEEQELlpnvkEVSETQETMNELELLTEQSTTkdsttlarIEM 1260
Cdd:PTZ00121 1790 EKRRMEVDKK-----IKDIFDNFANIIEggkeGNLVINDSKEM-----EDSAIKEVADSKNMQLEEADA--------FEK 1851
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1261 ERLRLNEKFQESQEEIKSLTKERDNLKTIKEalEVKHDQLKEHIRETLAKIQESQSkqeqslNMKEKDNETTKIVSEMEQ 1340
Cdd:PTZ00121 1852 HKFNKNNENGEDGNKEADFNKEKDLKEDDEE--EIEEADEIEKIDKDDIEREIPNN------NMAGKNNDIIDDKLDKDE 1923
|
650
....*....|...
gi 2462594594 1341 FKPKDSALLRIEI 1353
Cdd:PTZ00121 1924 YIKRDAEETREEI 1936
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
494-925 |
1.74e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 56.99 E-value: 1.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 494 ENIESELNSLRADYDNLVLDYEQLRTEKEEMELKLKE-KNDLDEFEALERktkkdqemQLIHEISNLKNLVKHAEVYNQD 572
Cdd:TIGR02168 694 AELEKALAELRKELEELEEELEQLRKELEELSRQISAlRKDLARLEAEVE--------QLEERIAQLSKELTELEAEIEE 765
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 573 LENELSSKVELLREKEDQIKKLQEYIDsqklenikmdlsyslesiedpkqmkqtlfdaetvalDAKRESAFLRSENLELK 652
Cdd:TIGR02168 766 LEERLEEAEEELAEAEAEIEELEAQIE------------------------------------QLKEELKALREALDELR 809
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 653 EKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQsafneitkltslidgkvpkdllcnlELEGKITDLQKELNKE 732
Cdd:TIGR02168 810 AELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIE-------------------------ELSEDIESLAAEIEEL 864
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 733 VEENEALREEVILLSELK-SLPSEVERLRKEIQDKSEELHIItsekdklfsevvhkESRVQGLLEEIGKTKDDLATTQSN 811
Cdd:TIGR02168 865 EELIEELESELEALLNERaSLEEALALLRSELEELSEELREL--------------ESKRSELRRELEELREKLAQLELR 930
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 812 YKSTDQEFQNFKTlhmDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQ 891
Cdd:TIGR02168 931 LEGLEVRIDNLQE---RLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTA 1007
|
410 420 430
....*....|....*....|....*....|....*
gi 2462594594 892 LKEQL-ENRDSTLQTVEREKTLITEKLQQTLEEVK 925
Cdd:TIGR02168 1008 QKEDLtEAKETLEEAIEEIDREARERFKDTFDQVN 1042
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1440-1914 |
1.96e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 56.70 E-value: 1.96e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1440 STIQKQLEAI-NDKLQNKIQEIY---EKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMleltNRLQESQE 1515
Cdd:COG4717 37 STLLAFIRAMlLERLEKEADELFkpqGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEEL----EELEAELE 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1516 EIQIMIKEKEEMKRVQEALQiERDQLKENTKEIVAKMKESQEKeyqflkmtaVNETQEKMCEIEHLKEQFETQKLNLENI 1595
Cdd:COG4717 113 ELREELEKLEKLLQLLPLYQ-ELEALEAELAELPERLEELEER---------LEELRELEEELEELEAELAELQEELEEL 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1596 etenirLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLretitRDLEKQEELKIVHMHLKEHQETIDKLRGI 1675
Cdd:COG4717 183 ------LEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEEL-----EELEEELEQLENELEAAALEERLKEARLL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1676 VSektneISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQ 1755
Cdd:COG4717 252 LL-----IAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLA 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1756 ELKANE----HQLITLKKDVNETQKKVSEMEQLKKQIKDQSLtlsKLEIENLnLAQKLHENLEEMKSVMKERDNLRRVEE 1831
Cdd:COG4717 327 ALGLPPdlspEELLELLDRIEELQELLREAEELEEELQLEEL---EQEIAAL-LAEAGVEDEEELRAALEQAEEYQELKE 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1832 TLKLERDQLKESLQETKAR-----DLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDldkskDELQKKIQE 1906
Cdd:COG4717 403 ELEELEEQLEELLGELEELlealdEEELEEELEELEEELEELEEELEELREELAELEAELEQLEED-----GELAELLQE 477
|
....*...
gi 2462594594 1907 LQKKELQL 1914
Cdd:COG4717 478 LEELKAEL 485
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1081-1939 |
2.05e-07 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 56.98 E-value: 2.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1081 EMSEMQKKINEIENLKNELKnkelTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEA 1160
Cdd:TIGR00606 167 EGKALKQKFDEIFSATRYIK----ALETLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKS 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1161 TGLQTKEelkiahihLKEHQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEeqellpnvKEVSETQETMNEL 1240
Cdd:TIGR00606 243 YENELDP--------LKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKME--------KVFQGTDEQLNDL 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1241 ELLTEQSTTKDSTTLARIEMERLRLNEKFQEsqeeiksLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEq 1320
Cdd:TIGR00606 307 YHNHQRTVREKERELVDCQRELEKLNKERRL-------LNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLE- 378
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1321 sLNMKEKDnettkivsemeqfkpkdsALLRIEIE-MLGLSKRLQEshDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKE 1399
Cdd:TIGR00606 379 -LDGFERG------------------PFSERQIKnFHTLVIERQE--DEAKTAAQLCADLQSKERLKQEQADEIRDEKKG 437
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1400 IvAKHLETEEELkvahcclkeQEETINELRVNLSEKEteistiqkQLEAINDKLQNKIQEIYEKEEQFN-IKQISEVQEK 1478
Cdd:TIGR00606 438 L-GRTIELKKEI---------LEKKQEELKFVIKELQ--------QLEGSSDRILELDQELRKAERELSkAEKNSLTETL 499
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1479 VNELKQFKEHRKAKDSALQSIESKMLELtNRLQESQEEIQIMIKEKeeMKRVQEALQIERDQLKENTKEIVAKMKESQEK 1558
Cdd:TIGR00606 500 KKEVKSLQNEKADLDRKLRKLDQEMEQL-NHHTTTRTQMEMLTKDK--MDKDEQIRKIKSRHSDELTSLLGYFPNKKQLE 576
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1559 EYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQL- 1637
Cdd:TIGR00606 577 DWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEESDLERLKEEIEKSSKQRa 656
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1638 ----KENLRETITRDLEKQEE-----LKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEEL 1708
Cdd:TIGR00606 657 mlagATAVYSQFITQLTDENQsccpvCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQ 736
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1709 RIAHMHLKEQQETIDKLRGIVSEktdkLSNMQKDLENSNAKLQEKIQELKANEhqliTLKKDVNETQKKVSEMEQLKKQI 1788
Cdd:TIGR00606 737 SIIDLKEKEIPELRNKLQKVNRD----IQRLKNDIEEQETLLGTIMPEEESAK----VCLTDVTIMERFQMELKDVERKI 808
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1789 KDQSLTL--SKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSK 1866
Cdd:TIGR00606 809 AQQAAKLqgSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEE 888
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462594594 1867 EHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFE 1939
Cdd:TIGR00606 889 QLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIE 961
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1393-1655 |
2.15e-07 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 56.47 E-value: 2.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1393 LKENIKEIVAK-HleteeELKVAHCCLKEQEETINELRvNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQ 1471
Cdd:PRK05771 14 LKSYKDEVLEAlH-----ELGVVHIEDLKEELSNERLR-KLRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEEL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1472 ISEVQEKVNElkqfkehrkakdsalqsIESKMLELTNRLQESQEEIQIMIKEKEEMKRVqEALQIERDQLK--ENTKEIV 1549
Cdd:PRK05771 88 IKDVEEELEK-----------------IEKEIKELEEEISELENEIKELEQEIERLEPW-GNFDLDLSLLLgfKYVSVFV 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1550 AKMKESQEKEYQ----FLKMTAVNETQEKM-----CEIEHLKEQFET-QKLNLENIETENIR-LTQILHENLEEMRSVTK 1618
Cdd:PRK05771 150 GTVPEDKLEELKlesdVENVEYISTDKGYVyvvvvVLKELSDEVEEElKKLGFERLELEEEGtPSELIREIKEELEEIEK 229
|
250 260 270
....*....|....*....|....*....|....*..
gi 2462594594 1619 ERDDLRSVEETLKVERDQLKENLRETITRDLEKQEEL 1655
Cdd:PRK05771 230 ERESLLEELKELAKKYLEELLALYEYLEIELERAEAL 266
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1155-1790 |
2.37e-07 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 56.45 E-value: 2.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1155 IREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQELLPNvkEVSETQ 1234
Cdd:PRK01156 161 INSLERNYDKLKDVIDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMD--DYNNLK 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1235 ETMNELELLTEqsttkdsttlariemERLRLNEKFQESQEEIKSLTKERDNLKTIKEalevkhdqlkEHIRETLAKIQES 1314
Cdd:PRK01156 239 SALNELSSLED---------------MKNRYESEIKTAESDLSMELEKNNYYKELEE----------RHMKIINDPVYKN 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1315 QSKQEQSLNMKEKDNETTKIVSEMeqfkpkDSALLRIEIEMLGLSKrLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLK 1394
Cdd:PRK01156 294 RNYINDYFKYKNDIENKKQILSNI------DAEINKYHAIIKKLSV-LQKDYNDYIKKKSRYDDLNNQILELEGYEMDYN 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1395 ENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDK---LQNKIQEIYEKEEQfnIKQ 1471
Cdd:PRK01156 367 SYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDISSKvssLNQRIRALRENLDE--LSR 444
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1472 ISEVQEKVNELKQFKEHrkAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALqiERDQLKENTKEIVAK 1551
Cdd:PRK01156 445 NMEMLNGQSVCPVCGTT--LGEEKSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKR--KEYLESEEINKSINE 520
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1552 MKESQEKEYQFLK-MTAVNETQEKMCEIEHLKEQFETQKlnlenietenirltqilhenLEEMRSVTKERDDLRSVEETL 1630
Cdd:PRK01156 521 YNKIESARADLEDiKIKINELKDKHDKYEEIKNRYKSLK--------------------LEDLDSKRTSWLNALAVISLI 580
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1631 KVERDQLKENLRETITRDLEKQEelkivhmhlkehQETIDKLRGIVSEKTNEISNMQKDLEHSNDALK-AQDLKIQ-EEL 1708
Cdd:PRK01156 581 DIETNRSRSNEIKKQLNDLESRL------------QEIEIGFPDDKSYIDKSIREIENEANNLNNKYNeIQENKILiEKL 648
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1709 RIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSE-------M 1781
Cdd:PRK01156 649 RGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDinetlesM 728
|
....*....
gi 2462594594 1782 EQLKKQIKD 1790
Cdd:PRK01156 729 KKIKKAIGD 737
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1453-1846 |
2.77e-07 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 56.06 E-value: 2.77e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1453 LQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQE 1532
Cdd:pfam07888 32 LQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1533 ALQIERDQLKENTKEIVAKMKESQEKeyqflKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHENLEE 1612
Cdd:pfam07888 112 ELSEEKDALLAQRAAHEARIRELEED-----IKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEE 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1613 MRSVTKERDDLRSVEEtlkvERDQLKENLRETITRdleKQEELKIVHMHLKEHQETIDKLRGivsekTNEISNMQkdlEH 1692
Cdd:pfam07888 187 LRSLSKEFQELRNSLA----QRDTQVLQLQDTITT---LTQKLTTAHRKEAENEALLEELRS-----LQERLNAS---ER 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1693 SNDALKaqdlkiqEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANehqlitLKKDVN 1772
Cdd:pfam07888 252 KVEGLG-------EELSSMAAQRDRTQAELHQARLQAAQLTLQLADASLALREGRARWAQERETLQQS------AEADKD 318
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462594594 1773 ETQKKVSEMEQLKKQIKDQSLTLSKLEIEnlnLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQE 1846
Cdd:pfam07888 319 RIEKLSAELQRLEERLQEERMEREKLEVE---LGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAEKQE 389
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
716-1098 |
3.01e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 56.23 E-value: 3.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 716 LELEGKITDLQKELNKEVEENEALReevillSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLL 795
Cdd:TIGR02169 677 QRLRERLEGLKRELSSLQSELRRIE------NRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLE 750
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 796 EEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMvlEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQEL 875
Cdd:TIGR02169 751 QEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSH--SRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEK 828
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 876 QEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIhdt 955
Cdd:TIGR02169 829 EYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKI--- 905
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 956 vnmnidtqEQLRNALESLKQHqetINTLKSKISEEVSRNLHMEENTGETKDEFQQKTIENQEELRLLgdelKKQQEIVAQ 1035
Cdd:TIGR02169 906 --------EELEAQIEKKRKR---LSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQ----RVEEEIRAL 970
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462594594 1036 E--KNHAIKkegELSRTCDRLAEveekLKEKSQQlqekqqqllnVQEEMSEMQKKINEIENLKNE 1098
Cdd:TIGR02169 971 EpvNMLAIQ---EYEEVLKRLDE----LKEKRAK----------LEEERKAILERIEEYEKKKRE 1018
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1229-1891 |
3.03e-07 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 56.39 E-value: 3.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1229 EVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIksltkerdnlktikEALEVKHDQLKEHIRETL 1308
Cdd:pfam12128 277 RQEERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSEL--------------EALEDQHGAFLDADIETA 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1309 AKIQESQSKQEQSLNMKEKDNE--TTKIVSEMEQFKPKDSAL-LRIEIEMLGLSKRLQESHDEM-KSVAKEKDDLQRLQE 1384
Cdd:pfam12128 343 AADQEQLPSWQSELENLEERLKalTGKHQDVTAKYNRRRSKIkEQNNRDIAGIKDKLAKIREARdRQLAVAEDDLQALES 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1385 VLQSESDQLKENIKEIVAKHLETEEELKVahccLKEQEETINELRVNLSEKETEISTIQKQLEAINdklqnkiqeiyeke 1464
Cdd:pfam12128 423 ELREQLEAGKLEFNEEEYRLKSRLGELKL----RLNQATATPELLLQLENFDERIERAREEQEAAN-------------- 484
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1465 eqfnikqiSEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEE--------IQIMIKE----KEEMKRVQE 1532
Cdd:pfam12128 485 --------AEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQlfpqagtlLHFLRKEapdwEQSIGKVIS 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1533 ALQIERDQL-----------KENTKEIVAKMKESQEKEYQFL------KMTAVNET-QEKMCEIEHLKEQFETQKLNLEN 1594
Cdd:pfam12128 557 PELLHRTDLdpevwdgsvggELNLYGVKLDLKRIDVPEWAASeeelreRLDKAEEAlQSAREKQAAAEEQLVQANGELEK 636
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1595 IETENIRLTQILHENLEEMRSVTKERDDL-RSVEETLKVERDQLKENLretitRDLEKQEELkivhmHLKEHQETIDKLR 1673
Cdd:pfam12128 637 ASREETFARTALKNARLDLRRLFDEKQSEkDKKNKALAERKDSANERL-----NSLEAQLKQ-----LDKKHQAWLEEQK 706
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1674 GIVSEKTNEISNMQKDLEHSNDA----LKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAK 1749
Cdd:pfam12128 707 EQKREARTEKQAYWQVVEGALDAqlalLKAAIAARRSGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLERKIER 786
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1750 LQEKIQELKA-----NEHQLI---TLKKDVNETQKKVSEME-QLKKQIKDQSLTLSKLEIE---NLNLAQKLHENLEEMK 1817
Cdd:pfam12128 787 IAVRRQEVLRyfdwyQETWLQrrpRLATQLSNIERAISELQqQLARLIADTKLRRAKLEMErkaSEKQQVRLSENLRGLR 866
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1818 SVM------KERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHK-----ETVDKLREK---ISEKT 1883
Cdd:pfam12128 867 CEMsklatlKEDANSEQAQGSIGERLAQLEDLKLKRDYLSESVKKYVEHFKNVIADHSgsglaETWESLREEdhyQNDKG 946
|
....*...
gi 2462594594 1884 IQISDIQK 1891
Cdd:pfam12128 947 IRLLDYRK 954
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
480-1019 |
3.10e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 56.20 E-value: 3.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 480 SEIEWNPATKLLNQEN-IESELNSLRADYDNLVLDYEQLRTEKEEMELKLKE-KNDLDEFEALERktkkdqemqlihEIS 557
Cdd:PRK02224 194 AQIEEKEEKDLHERLNgLESELAELDEEIERYEEQREQARETRDEADEVLEEhEERREELETLEA------------EIE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 558 NLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQ-----EYIDSQKLENIKMDLSYSLESIEDPKQMKQTLFDAET 632
Cdd:PRK02224 262 DLRETIAETEREREELAEEVRDLRERLEELEEERDDLLaeaglDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHN 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 633 VALDAKRESAF-LRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDgkvpkD 711
Cdd:PRK02224 342 EEAESLREDADdLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLE-----E 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 712 LLCNL-ELEGKITDLQ---KELNKEVEENEALREE---------------VILLSE----LKSLPSEVERLRKEIQDKSE 768
Cdd:PRK02224 417 LREERdELREREAELEatlRTARERVEEAEALLEAgkcpecgqpvegsphVETIEEdrerVEELEAELEDLEEEVEEVEE 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 769 ELHIITSEKdKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIV 848
Cdd:PRK02224 497 RLERAEDLV-EAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVA 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 849 NLSKEAQKFDSSLGALKTeLSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQtlEEVKTLT 928
Cdd:PRK02224 576 ELNSKLAELKERIESLER-IRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDE--ARIEEAR 652
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 929 QEKDDLKQLQE-------SLQIERDQLKSDIhDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEevsrnlhMEENT 1001
Cdd:PRK02224 653 EDKERAEEYLEqveekldELREERDDLQAEI-GAVENELEELEELRERREALENRVEALEALYDEAEE-------LESMY 724
|
570
....*....|....*...
gi 2462594594 1002 GETKDEFQQKTIENQEEL 1019
Cdd:PRK02224 725 GDLRAELRQRNVETLERM 742
|
|
| PTZ00440 |
PTZ00440 |
reticulocyte binding protein 2-like protein; Provisional |
450-1953 |
3.45e-07 |
|
reticulocyte binding protein 2-like protein; Provisional
Pssm-ID: 240419 [Multi-domain] Cd Length: 2722 Bit Score: 56.38 E-value: 3.45e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 450 THKLSINLLREIDESVCSESDVFSNTLDTLSEIEWNPATKLLNQENIESELNSLRADYDNLVLDYEQLRTEKEEMELKLK 529
Cdd:PTZ00440 355 SFKFSLEMLSMLDSLLIKKEKILNNLFNKLFGDLKEKIETLLDSEYFISKYTNIISLSEHTLKAAEDVLKENSQKIADYA 434
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 530 EKNDLdefEALERKTKKDQEM----QLIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQEYIdsQKLEN 605
Cdd:PTZ00440 435 LYSNL---EIIEIKKKYDEKInelkKSINQLKTLISIMKSFYDLIISEKDSMDSKEKKESSDSNYQEKVDELL--QIINS 509
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 606 IKMDLSYSLESIEDPKQMKQTLFDAETVALDAKRESAFLRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMqVD 685
Cdd:PTZ00440 510 IKEKNNIVNNNFKNIEDYYITIEGLKNEIEGLIELIKYYLQSIETLIKDEKLKRSMKNDIKNKIKYIEENVDHIKDI-IS 588
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 686 LEKELQSAFNEITKLTSLI------------DGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREE-------VILL 746
Cdd:PTZ00440 589 LNDEIDNIIQQIEELINEAlfnkekfineknDLQEKVKYILNKFYKGDLQELLDELSHFLDDHKYLYHEakskedlQTLL 668
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 747 SELKSLPSEVERLRKEIQD------KSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQ 820
Cdd:PTZ00440 669 NTSKNEYEKLEFMKSDNIDniiknlKKELQNLLSLKENIIKKQLNNIEQDISNSLNQYTIKYNDLKSSIEEYKEEEEKLE 748
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 821 NFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENrD 900
Cdd:PTZ00440 749 VYKHQIINRKNEFILHLYENDKDLPDGKNTYEEFLQYKDTILNKENKISNDINILKENKKNNQDLLNSYNILIQKLEA-H 827
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 901 STLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESL--QIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQH-Q 977
Cdd:PTZ00440 828 TEKNDEELKQLLQKFPTEDENLNLKELEKEFNENNQIVDNIikDIENMNKNINIIKTLNIAINRSNSNKQLVEHLLNNkI 907
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 978 ETINTLKSKISEEVSRNLHMEENTGETKDEFQQKTIENQEElrlLGDELKKQQEIVAQEKNHAIKKEGElsRTCDRLAEV 1057
Cdd:PTZ00440 908 DLKNKLEQHMKIINTDNIIQKNEKLNLLNNLNKEKEKIEKQ---LSDTKINNLKMQIEKTLEYYDKSKE--NINGNDGTH 982
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1058 EEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENlknelKNKELTLEHMETERLELAQKLNENYEEVKSITKErkvL 1137
Cdd:PTZ00440 983 LEKLDKEKDEWEHFKSEIDKLNVNYNILNKKIDDLIK-----KQHDDIIELIDKLIKEKGKEIEEKVDQYISLLEK---M 1054
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1138 KELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRsvseKTAQIINTQDLEKSHTKLQEEIpvl 1217
Cdd:PTZ00440 1055 KTKLSSFHFNIDIKKYKNPKIKEEIKLLEEKVEALLKKIDENKNKLIEIKN----KSHEHVVNADKEKNKQTEHYNK--- 1127
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1218 heEQELLPNVKEvsETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKH 1297
Cdd:PTZ00440 1128 --KKKSLEKIYK--QMEKTLKELENMNLEDITLNEVNEIEIEYERILIDHIVEQINNEAKKSKTIMEEIESYKKDIDQVK 1203
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1298 DQLKEHIRETLAKIQESQSKQEqSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKD 1377
Cdd:PTZ00440 1204 KNMSKERNDHLTTFEYNAYYDK-ATASYENIEELTTEAKGLKGEANRSTNVDELKEIKLQVFSYLQQVIKENNKMENALH 1282
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1378 DLQRLQEVLQSESdqLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEaiNDKLQNKI 1457
Cdd:PTZ00440 1283 EIKNMYEFLISID--SEKILKEILNSTKKAEEFSNDAKKELEKTDNLIKQVEAKIEQAKEHKNKIYGSLE--DKQIDDEI 1358
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1458 QEIYEKEEQFNIKQiSEVQEKVNELKQFKehrkakdsalqsiESKMLELTNrLQESQEEIQIMIKEKEEMKRVQEALQIe 1537
Cdd:PTZ00440 1359 KKIEQIKEEISNKR-KEINKYLSNIKSNK-------------EKCDLHVRN-ASRGKDKIDFLNKHEAIEPSNSKEVNI- 1422
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1538 rdqlkENTKEIVAKMKESQEKeyqflkmtaVNETQEKMCEIEHLKEQFETqklNLENIETENIRLtQILHENLEEMRSVT 1617
Cdd:PTZ00440 1423 -----IKITDNINKCKQYSNE---------AMETENKADENNDSIIKYEK---EITNILNNSSIL-GKKTKLEKKKKEAT 1484
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1618 KERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEhsNDAL 1697
Cdd:PTZ00440 1485 NIMDDINGEHSIIKTKLTKSSEKLNQLNEQPNIKREGDVLNNDKSTIAYETIQYNLGRVKHNLLNILNIKDEIE--TILN 1562
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1698 KAQDLkiqeELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSN---AKLQEKIQELKANEHQLITLKK----- 1769
Cdd:PTZ00440 1563 KAQDL----MRDISKISKIVENKNLENLNDKEADYVKYLDNILKEKQLMEaeyKKLNEIYSDVDNIEKELKKHKKnyeig 1638
|
1370 1380 1390 1400 1410 1420 1430 1440
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1770 ---DVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQ-KLHENLEEMKSVMKERDNlrRVEETLKLERDQLKESL- 1844
Cdd:PTZ00440 1639 lleKVIEINKNIKLYMDSTKESLNSLVNNFSSLFNNFYLNKyNINENLEKYKKKLNEIYN--EFMESYNIIQEKMKEVSn 1716
|
1450 1460 1470 1480 1490 1500 1510 1520
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1845 -----QETKARDLEIQQELKTARMLSKEHK------------ETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQEL 1907
Cdd:PTZ00440 1717 ddvdyNEAKTLREEAQKEEVNLNNKEEEAKkylndikkqesfRFILYMKEKLDELSKMCKQQYNIVDEGYNYIKKKIEYI 1796
|
1530 1540 1550 1560
....*....|....*....|....*....|....*....|....*...
gi 2462594594 1908 Q--KKELQLLRVKEDVNMSHKKINEMEQLKKQFEAQNLSMQSVRMDNF 1953
Cdd:PTZ00440 1797 KtlNDENNLSDSLNQAEDKNKEVANLTHYTNKNEAKNLLGHVVKSANF 1844
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1662-2505 |
3.53e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 56.23 E-value: 3.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1662 LKEHQETIDKLRGIVSEKTNEISNMQKDLEHsndALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDklsnmqk 1741
Cdd:TIGR02169 179 LEEVEENIERLDLIIDEKRQQLERLRREREK---AERYQALLKEKREYEGYELLKEKEALERQKEAIERQLAS------- 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1742 dLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLT---------LSKLEIENLNLAQKLHEN 1812
Cdd:TIGR02169 249 -LEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEaeiaslersIAEKERELEDAEERLAKL 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1813 LEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKD 1892
Cdd:TIGR02169 328 EAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRE 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1893 LDKSKDELQKKIQELQKKELQLLRVKEDVNmshKKINEMEQLKKQFEAQNLSMQSVRMDnfqltkklhesleeiriVAKE 1972
Cdd:TIGR02169 408 LDRLQEELQRLSEELADLNAAIAGIEAKIN---ELEEEKEDKALEIKKQEWKLEQLAAD-----------------LSKY 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1973 RDELRRIKESLKMERDQFIATLREMIARDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMDDHYECL--N 2050
Cdd:TIGR02169 468 EQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAIEVAagN 547
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2051 RLS-------LDLEKEIEFQKELSMRVKANLSLPYLQTKHIEKLFTANQRCsmefhrimkkLKYVLSYVTKikEEQHESI 2123
Cdd:TIGR02169 548 RLNnvvveddAVAKEAIELLKRRKAGRATFLPLNKMRDERRDLSILSEDGV----------IGFAVDLVEF--DPKYEPA 615
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2124 NKFEMD---FIDEVEKQKELLIKIQHLQQDCDV---------PSRELRDLKLNQnmdlhieeilkdfsesefPSIKTEFQ 2191
Cdd:TIGR02169 616 FKYVFGdtlVVEDIEAARRLMGKYRMVTLEGELfeksgamtgGSRAPRGGILFS------------------RSEPAELQ 677
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2192 QVLSNRKEMtqfleewlntrfdiEKLKNGIQKENDRIcqvnnffNNRIIAIMNESTEFEERSATISKEWEQdlksLKEKN 2271
Cdd:TIGR02169 678 RLRERLEGL--------------KRELSSLQSELRRI-------ENRLDELSQELSDASRKIGEIEKEIEQ----LEQEE 732
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2272 EKLFKNYQTLKTSLASgAQVNPTTQDNKNPHVTSRATQLTtEKIRELENSLHEAKesAMHKESKIIKMQKELEVTNDIIA 2351
Cdd:TIGR02169 733 EKLKERLEELEEDLSS-LEQEIENVKSELKELEARIEELE-EDLHKLEEALNDLE--ARLSHSRIPEIQAELSKLEEEVS 808
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2352 KLQAKVHESNKCLEKTKETIQVLQDkvalgakpykeEIEDLKMKLVKIDLEKmknaKEFEKEISATKATVEYQKEVIRLL 2431
Cdd:TIGR02169 809 RIEARLREIEQKLNRLTLEKEYLEK-----------EIQELQEQRIDLKEQI----KSIEKEIENLNGKKEELEEELEEL 873
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462594594 2432 RENLRRsqqaqdtsvisehtdpqpsnkpltcgggsgivqntkaliLKSEHIRLEKEISKLKQQNEQLIKQKNEL 2505
Cdd:TIGR02169 874 EAALRD---------------------------------------LESRLGDLKKERDELEAQLRELERKIEEL 908
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
509-1122 |
4.93e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 55.41 E-value: 4.93e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 509 NLVLDYEQLRTEKEEMELKLKEKNDLDEfealERKTKKDQEMQLIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKE 588
Cdd:TIGR04523 104 DLSKINSEIKNDKEQKNKLEVELNKLEK----QKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLE 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 589 DQIKKLQEYIDSQKLENIKmdLSYSLESIEDPKQMKQTLfdaetvaldaKRESAFLRSENLELKEKMKELATTYKQMEND 668
Cdd:TIGR04523 180 KEKLNIQKNIDKIKNKLLK--LELLLSNLKKKIQKNKSL----------ESQISELKKQNNQLKDNIEKKQQEINEKTTE 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 669 IQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEG----KITDLQKELNKEVEENEalREEVI 744
Cdd:TIGR04523 248 ISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDlnnqKEQDWNKELKSELKNQE--KKLEE 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 745 LLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKT 824
Cdd:TIGR04523 326 IQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEK 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 825 LHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQ 904
Cdd:TIGR04523 406 LNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLE 485
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 905 TVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIhdtvnmnidtqEQLRNALESLKQHQETINTLK 984
Cdd:TIGR04523 486 QKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEK-----------KEKESKISDLEDELNKDDFEL 554
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 985 SKISEEVSRNlHMEENTGETKDEfQQKTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRtcdRLAEVEEKLKEK 1064
Cdd:TIGR04523 555 KKENLEKEID-EKNKEIEELKQT-QKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEK---ELEKAKKENEKL 629
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 2462594594 1065 SQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNE 1122
Cdd:TIGR04523 630 SSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTKIDDIIELMKDWLK 687
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
541-1164 |
5.35e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 55.33 E-value: 5.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 541 ERKTKKDQEMQLiHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSQKLENIKMDLSYSLESIEDP 620
Cdd:COG1196 220 EELKELEAELLL-LKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELA 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 621 KQMKQTLFDAETVAlDAKRESAFLRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKL 700
Cdd:COG1196 299 RLEQDIARLEERRR-ELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEA 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 701 TSLIDGKVpKDLLcnLELEGKITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKL 780
Cdd:COG1196 378 EEELEELA-EELL--EALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAEL 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 781 FSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVN--LSKEAQKFD 858
Cdd:COG1196 455 EEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAgaVAVLIGVEA 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 859 SSLGALKTELSYKTQELQEKTREVQERLneMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQ 938
Cdd:COG1196 535 AYEAALEAALAAALQNIVVEDDEVAAAA--IEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREAD 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 939 ESLQIERDQL--KSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEVSRN----LHMEENTGETKDEFQQKT 1012
Cdd:COG1196 613 ARYYVLGDTLlgRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELlaalLEAEAELEELAERLAEEE 692
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1013 IENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKkinEI 1092
Cdd:COG1196 693 LELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELER---EL 769
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1093 ENLKNELknkeltlehmetERLE----LAqkLNEnYEEVK----SITKERKVLKElqksfetERDHLRGYIREIEATGLQ 1164
Cdd:COG1196 770 ERLEREI------------EALGpvnlLA--IEE-YEELEerydFLSEQREDLEE-------ARETLEEAIEEIDRETRE 827
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1597-1993 |
5.48e-07 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 55.13 E-value: 5.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1597 TENIRLTQILHenLEEMRSVTKERDDLRSVEetlKVERDQLKENlRETITRDLEKQEELKIVHmhlKEHQETIDKLRGIV 1676
Cdd:pfam17380 266 TENEFLNQLLH--IVQHQKAVSERQQQEKFE---KMEQERLRQE-KEEKAREVERRRKLEEAE---KARQAEMDRQAAIY 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1677 SEKTNEISNMQKDLEhsndalkaqdlKIQEELRIAHMHLKEQQETIDKLrgivsEKTDKLSNMQKDLENSNAKLQekiQE 1756
Cdd:pfam17380 337 AEQERMAMERERELE-----------RIRQEERKRELERIRQEEIAMEI-----SRMRELERLQMERQQKNERVR---QE 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1757 LKANEHQLITLKKDVNETQKKVSEMEQLKKQIKdqsltlskleienlNLAQKLHENLEEMKSVMKERDNLRRVEETLKLE 1836
Cdd:pfam17380 398 LEAARKVKILEEERQRKIQQQKVEMEQIRAEQE--------------EARQREVRRLEEERAREMERVRLEEQERQQQVE 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1837 RdqLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKelqllR 1916
Cdd:pfam17380 464 R--LRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERKRKLLEKEMEERQKAIYEEERR-----R 536
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462594594 1917 VKEDVNMSHKKINEMEQLKKQFeaqnlsmqsvrmdnfqltKKLHESLEEIRIVAKERDELRRIKESLKMERDQFIAT 1993
Cdd:pfam17380 537 EAEEERRKQQEMEERRRIQEQM------------------RKATEERSRLEAMEREREMMRQIVESEKARAEYEATT 595
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
1361-2499 |
6.26e-07 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 55.44 E-value: 6.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1361 RLQESHDEMKSVAKEKDDLQRLQEVLQSESDQlkeNIKEIVAKhlETEEELKVAHCCLKEQEETINELRVNLSEKETEIS 1440
Cdd:TIGR01612 501 RMKDFKDIIDFMELYKPDEVPSKNIIGFDIDQ---NIKAKLYK--EIEAGLKESYELAKNWKKLIHEIKKELEEENEDSI 575
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1441 TIQKQLEAINDKLQNKIQEIYE--------KEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESkmLELTNRLQe 1512
Cdd:TIGR01612 576 HLEKEIKDLFDKYLEIDDEIIYinklklelKEKIKNISDKNEYIKKAIDLKKIIENNNAYIDELAKISP--YQVPEHLK- 652
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1513 SQEEIQIMIKekeemkrvQEALQIERDQLKENTKEIVAKMKESQEKEYQflKMTAVNETQEKMCEIEHLKEQFETQ--KL 1590
Cdd:TIGR01612 653 NKDKIYSTIK--------SELSKIYEDDIDALYNELSSIVKENAIDNTE--DKAKLDDLKSKIDKEYDKIQNMETAtvEL 722
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1591 NLENIETENIRLTQIL-----HENLEEMRSVTKERDDLRSVEETLKV-------ERDQL----------KENLRETITRD 1648
Cdd:TIGR01612 723 HLSNIENKKNELLDIIveikkHIHGEINKDLNKILEDFKNKEKELSNkindyakEKDELnkykskiseiKNHYNDQINID 802
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1649 LEKQEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEqqeTIDKLRGI 1728
Cdd:TIGR01612 803 NIKDEDAKQNYDKSKEYIKTISIKEDEIFKIINEMKFMKDDFLNKVDKFINFENNCKEKIDSEHEQFAE---LTNKIKAE 879
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1729 VSEktDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKK-----DVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENL 1803
Cdd:TIGR01612 880 ISD--DKLNDYEKKFNDSKSLINEINKSIEEEYQNINTLKKvdeyiKICENTKESIEKFHNKQNILKEILNKNIDTIKES 957
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1804 NLAQKLHENLEEmKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSK---EHKETVDKLREKIS 1880
Cdd:TIGR01612 958 NLIEKSYKDKFD-NTLIDKINELDKAFKDASLNDYEAKNNELIKYFNDLKANLGKNKENMLYHqfdEKEKATNDIEQKIE 1036
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1881 EKTIQISDIQKDLDKSKDELQKKIQELQKKELQLL--RVKEDVNMSHKKINEMEQLKKQFEAQNLsmqsVRMDNFQLTKK 1958
Cdd:TIGR01612 1037 DANKNIPNIEIAIHTSIYNIIDEIEKEIGKNIELLnkEILEEAEINITNFNEIKEKLKHYNFDDF----GKEENIKYADE 1112
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1959 LHESLEEIRIVAKERDELRRIKESLKMERDQFIATLREMIARDRQnhqvKPEKRLLSDGQQHLTESLREKCSRIKELLKR 2038
Cdd:TIGR01612 1113 INKIKDDIKNLDQKIDHHIKALEEIKKKSENYIDEIKAQINDLED----VADKAISNDDPEEIEKKIENIVTKIDKKKNI 1188
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2039 YSEMDDHYECLNRLSLDlEKEIEFQKELSMRVKANLSLPYLQTKHIEKLFTANQRCSMEfhRIMKKLKYVLSYVTKIKEE 2118
Cdd:TIGR01612 1189 YDEIKKLLNEIAEIEKD-KTSLEEVKGINLSYGKNLGKLFLEKIDEEKKKSEHMIKAME--AYIEDLDEIKEKSPEIENE 1265
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2119 QH-ESINKFEMDF--IDEVEKQKELLIKIQHLQQDCDVPSRELRdlklnqnmdlhieeILKDFS-ESEFPSIKTEFQQVL 2194
Cdd:TIGR01612 1266 MGiEMDIKAEMETfnISHDDDKDHHIISKKHDENISDIREKSLK--------------IIEDFSeESDINDIKKELQKNL 1331
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2195 SNRKEMTQFLEEWLNtrfdieklkngiqkendricQVNNFFN----NRIIAIMNESTEFEERSatisKEWEQDLKSLKEK 2270
Cdd:TIGR01612 1332 LDAQKHNSDINLYLN--------------------EIANIYNilklNKIKKIIDEVKEYTKEI----EENNKNIKDELDK 1387
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2271 NEKLFK------NYQTLKTSLAS---GAQVNPTTQDNK--NPHVTSRATQLTTEKIRELENS-----LHEAKESAMHKES 2334
Cdd:TIGR01612 1388 SEKLIKkikddiNLEECKSKIEStldDKDIDECIKKIKelKNHILSEESNIDTYFKNADENNenvllLFKNIEMADNKSQ 1467
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2335 KIIKMQKElEVTNDI---IAKLQAKVHESNKC-LEKTKETIQVLQDKVALgaKPYKEEIEDLKMKLVKIdlekmknakEF 2410
Cdd:TIGR01612 1468 HILKIKKD-NATNDHdfnINELKEHIDKSKGCkDEADKNAKAIEKNKELF--EQYKKDVTELLNKYSAL---------AI 1535
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2411 EKEISATKATVEyqkEVIRLLREnlrrsqqAQDTSVISEHTDPQPSNKpltcgggsgivqntkaliLKSEHIRLEKEISK 2490
Cdd:TIGR01612 1536 KNKFAKTKKDSE---IIIKEIKD-------AHKKFILEAEKSEQKIKE------------------IKKEKFRIEDDAAK 1587
|
....*....
gi 2462594594 2491 LKQQNEQLI 2499
Cdd:TIGR01612 1588 NDKSNKAAI 1596
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
873-1535 |
6.35e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 55.31 E-value: 6.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 873 QELQEKTREVQERLNEMEQLKEQLEnrdstLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDI 952
Cdd:COG4913 258 RELAERYAAARERLAELEYLRAALR-----LWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQI 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 953 hdtvnMNIDTQ--EQLRNALESLKQHQETINTlKSKISEEVSRNLHMEENtgETKDEFQqktiENQEELRLLGDELKKQQ 1030
Cdd:COG4913 333 -----RGNGGDrlEQLEREIERLERELEERER-RRARLEALLAALGLPLP--ASAEEFA----ALRAEAAALLEALEEEL 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1031 EIVAQeknhaikkegELSRTCDRLAEVEEKLKEKSqqlqekqqqllnvqeemsemqkkiNEIENLKnelKNKELTLEHME 1110
Cdd:COG4913 401 EALEE----------ALAEAEAALRDLRRELRELE------------------------AEIASLE---RRKSNIPARLL 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1111 TERLELAQKLNENYEEVksitkerKVLKEL----------QKSFET-----------ERDHLRGYIREIEATGLQTKeeL 1169
Cdd:COG4913 444 ALRDALAEALGLDEAEL-------PFVGELievrpeeerwRGAIERvlggfaltllvPPEHYAAALRWVNRLHLRGR--L 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1170 KIAHIHLKEHQETIDEL-RRSVSEKtaqiintqdLEKSHTKLQEEIpvlheEQEL--LPNVKEVSETQETMNELELLTEQ 1246
Cdd:COG4913 515 VYERVRTGLPDPERPRLdPDSLAGK---------LDFKPHPFRAWL-----EAELgrRFDYVCVDSPEELRRHPRAITRA 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1247 STTKDSTTLARIEMERLRLN---------EKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEhIRETLAKIQESqsk 1317
Cdd:COG4913 581 GQVKGNGTRHEKDDRRRIRSryvlgfdnrAKLAALEAELAELEEELAEAEERLEALEAELDALQE-RREALQRLAEY--- 656
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1318 QEQSLNMKEKDNETTKIVSEMEQFKpKDSALLRieiemlGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENI 1397
Cdd:COG4913 657 SWDEIDVASAEREIAELEAELERLD-ASSDDLA------ALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEEL 729
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1398 KEIVAKHLETEEELKVahcclkEQEETINELRVNLSEKETEIS---TIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISE 1474
Cdd:COG4913 730 DELQDRLEAAEDLARL------ELRALLEERFAAALGDAVERElreNLEERIDALRARLNRAEEELERAMRAFNREWPAE 803
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462594594 1475 VQE------------------KVNELKQFKEhrKAKDSALQSIESKMLELTNRLQESQEEIqimikeKEEMKRVQEALQ 1535
Cdd:COG4913 804 TADldadleslpeylalldrlEEDGLPEYEE--RFKELLNENSIEFVADLLSKLRRAIREI------KERIDPLNDSLK 874
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
496-2005 |
6.53e-07 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 55.44 E-value: 6.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 496 IESELNSLRADYdnLVLDYEQLRTEKEEMELKLKEKNDLDEFEALER-------------------KTKKDQEMQLIHEI 556
Cdd:TIGR01612 577 LEKEIKDLFDKY--LEIDDEIIYINKLKLELKEKIKNISDKNEYIKKaidlkkiiennnayidelaKISPYQVPEHLKNK 654
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 557 SNLKNLVKH--AEVYNQDLE---NELSSKVellreKEDQIKKLQeyiDSQKLENI--KMDLSYSLESIEDPKQMKQTLFD 629
Cdd:TIGR01612 655 DKIYSTIKSelSKIYEDDIDalyNELSSIV-----KENAIDNTE---DKAKLDDLksKIDKEYDKIQNMETATVELHLSN 726
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 630 AETVA---LDAKRE-SAFLRSE-NLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEkELQSAFNEITKLTSLI 704
Cdd:TIGR01612 727 IENKKnelLDIIVEiKKHIHGEiNKDLNKILEDFKNKEKELSNKINDYAKEKDELNKYKSKIS-EIKNHYNDQINIDNIK 805
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 705 DGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEVilLSELKSLPSEVERLRKEIQDKSEELHIITSE-----KDK 779
Cdd:TIGR01612 806 DEDAKQNYDKSKEYIKTISIKEDEIFKIINEMKFMKDDF--LNKVDKFINFENNCKEKIDSEHEQFAELTNKikaeiSDD 883
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 780 LFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKE------ 853
Cdd:TIGR01612 884 KLNDYEKKFNDSKSLINEINKSIEEEYQNINTLKKVDEYIKICENTKESIEKFHNKQNILKEILNKNIDTIKESnlieks 963
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 854 -AQKFDSSLGALKTEL--SYKTQELQEKTREVQERLNEMEQLKEQL-ENRDSTLQTVEREKTLITEKLQQTLEEVKTltq 929
Cdd:TIGR01612 964 yKDKFDNTLIDKINELdkAFKDASLNDYEAKNNELIKYFNDLKANLgKNKENMLYHQFDEKEKATNDIEQKIEDANK--- 1040
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 930 ekdDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEqlRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGET----- 1004
Cdd:TIGR01612 1041 ---NIPNIEIAIHTSIYNIIDEIEKEIGKNIELLN--KEILEEAEINITNFNEIKEKLKHYNFDDFGKEENIKYAdeink 1115
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1005 -KDEFQ---QKTIENQEELrllgDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEkLKEKSQQLQEKQQQLLNVQE 1080
Cdd:TIGR01612 1116 iKDDIKnldQKIDHHIKAL----EEIKKKSENYIDEIKAQINDLEDVADKAISNDDPEE-IEKKIENIVTKIDKKKNIYD 1190
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1081 EMSEMQKKINEIENLKN---ELKNKELT----LEHMETERLELAQKLNENYeeVKSITKERKVLKELQK---SFETERDH 1150
Cdd:TIGR01612 1191 EIKKLLNEIAEIEKDKTsleEVKGINLSygknLGKLFLEKIDEEKKKSEHM--IKAMEAYIEDLDEIKEkspEIENEMGI 1268
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1151 LRGYIREIEATGLqTKEELKIAHIHLKEHQETIDELRRS---VSEKTAQIINTQDLEKS-------HTKLQEEIPVLHEE 1220
Cdd:TIGR01612 1269 EMDIKAEMETFNI-SHDDDKDHHIISKKHDENISDIREKslkIIEDFSEESDINDIKKElqknlldAQKHNSDINLYLNE 1347
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1221 QELLPNVKEVSETQETMNELELLTEQsttkdsttlarIEMERLRLNEKFQESQEEIKSLtKERDNLKTIKEALEVKHDQl 1300
Cdd:TIGR01612 1348 IANIYNILKLNKIKKIIDEVKEYTKE-----------IEENNKNIKDELDKSEKLIKKI-KDDINLEECKSKIESTLDD- 1414
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1301 kEHIRETLAKIQESQS---KQEQSL-----NMKEKDNETTKIVSEMEQFKPKDSALLRIEI-----EMLGLSKRLQESHD 1367
Cdd:TIGR01612 1415 -KDIDECIKKIKELKNhilSEESNIdtyfkNADENNENVLLLFKNIEMADNKSQHILKIKKdnatnDHDFNINELKEHID 1493
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1368 EMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHC------CLKEQEETINELRVNLSEKETEIST 1441
Cdd:TIGR01612 1494 KSKGCKDEADKNAKAIEKNKELFEQYKKDVTELLNKYSALAIKNKFAKTkkdseiIIKEIKDAHKKFILEAEKSEQKIKE 1573
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1442 IQKQLEAI------NDKLQNKIQEIYEKEEQFNIK--QISEVQEKVNELKQFKEHRKAKDSALqSIESKMLELTNR---- 1509
Cdd:TIGR01612 1574 IKKEKFRIeddaakNDKSNKAAIDIQLSLENFENKflKISDIKKKINDCLKETESIEKKISSF-SIDSQDTELKENgdnl 1652
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1510 ---------LQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTK-EIVAKMKESQEKEYQflKMTAVNETQEKMceIE 1579
Cdd:TIGR01612 1653 nslqeflesLKDQKKNIEDKKKELDELDSEIEKIEIDVDQHKKNYEiGIIEKIKEIAIANKE--EIESIKELIEPT--IE 1728
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1580 HLKEQFETQKLN----LENIETENIRLTQILHENLEE-------MRSVTKERDDLRSVEETLKVERDQLKENLR-----E 1643
Cdd:TIGR01612 1729 NLISSFNTNDLEgidpNEKLEEYNTEIGDIYEEFIELyniiagcLETVSKEPITYDEIKNTRINAQNEFLKIIEiekksK 1808
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1644 TITRDLEKQEELKIVHmHLKEhqetidKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHlkeqqETID 1723
Cdd:TIGR01612 1809 SYLDDIEAKEFDRIIN-HFKK------KLDHVNDKFTKEYSKINEGFDDISKSIENVKNSTDENLLFDILN-----KTKD 1876
|
1370 1380 1390 1400 1410 1420 1430 1440
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1724 KLRGIVS--------EKTDKLSNMQKDLENSNAKLQEK--IQELK-ANEHQLITLKKDVNETQKKVSEME---QLKKQIK 1789
Cdd:TIGR01612 1877 AYAGIIGkkyysykdEAEKIFINISKLANSINIQIQNNsgIDLFDnINIAILSSLDSEKEDTLKFIPSPEkepEIYTKIR 1956
|
1450 1460 1470 1480 1490 1500 1510 1520
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1790 DQSLTLskleIENLNLAQKLHENLEEMKSVMKERdnlRRVEETLKlERDQLKESLQETKARDLEIQQELKTARMLSKE-H 1868
Cdd:TIGR01612 1957 DSYDTL----LDIFKKSQDLHKKEQDTLNIIFEN---QQLYEKIQ-ASNELKDTLSDLKYKKEKILNDVKLLLHKFDElN 2028
|
1530 1540 1550 1560 1570 1580 1590 1600
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1869 KETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQllrvkEDVNMSHKKINEMEQLKKQFEAQNLSMQSV 1948
Cdd:TIGR01612 2029 KLSCDSQNYDTILELSKQDKIKEKIDNYEKEKEKFGIDFDVKAME-----EKFDNDIKDIEKFENNYKHSEKDNHDFSEE 2103
|
1610 1620 1630 1640 1650 1660
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462594594 1949 RMDNFQLTKKLHESLE----EIRIVAKERDELRRIKESLKMERDQFI----ATLREMIARDRQNH 2005
Cdd:TIGR01612 2104 KDNIIQSKKKLKELTEafntEIKIIEDKIIEKNDLIDKLIEMRKECLlfsyATLVETLKSKVINH 2168
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
1210-1858 |
6.93e-07 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 54.83 E-value: 6.93e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1210 LQEEIPVLHEEQELLP-NVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKT 1288
Cdd:pfam10174 58 LKEQYRVTQEENQHLQlTIQALQDELRAQRDLNQLLQQDFTTSPVDGEDKFSTPELTEENFRRLQSEHERQAKELFLLRK 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1289 IKEALEVKHDQLKEHIRETLAKIQE----SQSKQEQSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQE 1364
Cdd:pfam10174 138 TLEEMELRIETQKQTLGARDESIKKllemLQSKGLPKKSGEEDWERTRRIAEAEMQLGHLEVLLDQKEKENIHLREELHR 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1365 SHDEMKSVAKEK-------------DDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVN 1431
Cdd:pfam10174 218 RNQLQPDPAKTKalqtviemkdtkiSSLERNIRDLEDEVQMLKTNGLLHTEDREEEIKQMEVYKSHSKFMKNKIDQLKQE 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1432 LSEKETEISTIQKQLEAINDklqnkiqeiyekeEQFNIKQISEVqekvnelkqFKEHRKAKDSALQSIESKMLELTNRLQ 1511
Cdd:pfam10174 298 LSKKESELLALQTKLETLTN-------------QNSDCKQHIEV---------LKESLTAKEQRAAILQTEVDALRLRLE 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1512 ESQeeiQIMIKEKEEMKRVQEAlqierdqlKENTKEIVAKMKESQEkeyqfLKMTAVNETQEKmceIEHLKEQFETQKLN 1591
Cdd:pfam10174 356 EKE---SFLNKKTKQLQDLTEE--------KSTLAGEIRDLKDMLD-----VKERKINVLQKK---IENLQEQLRDKDKQ 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1592 LENietenirltqiLHENLEEMRSVTKERDD-LRSVEETLKvERDQLKENLRETITR-DLEKQEELKIVHMHLKEHQETI 1669
Cdd:pfam10174 417 LAG-----------LKERVKSLQTDSSNTDTaLTTLEEALS-EKERIIERLKEQREReDRERLEELESLKKENKDLKEKV 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1670 DKLRGIVSEKTNEISnmqkDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRG---------IVSEKTDKLSNMQ 1740
Cdd:pfam10174 485 SALQPELTEKESSLI----DLKEHASSLASSGLKKDSKLKSLEIAVEQKKEECSKLENqlkkahnaeEAVRTNPEINDRI 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1741 KDLENSNAKLQEKIQELKANEHQLITLKKDV----NETQKKVSEMEQLK-KQIKDQSLTLSKLeieNLNLAQKLHENLEE 1815
Cdd:pfam10174 561 RLLEQEVARYKEESGKAQAEVERLLGILREVenekNDKDKKIAELESLTlRQMKEQNKKVANI---KHGQQEMKKKGAQL 637
|
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 2462594594 1816 MKSVMKERDNLRRVEETLKLER-----DQLKESLQETKARDLEIQQEL 1858
Cdd:pfam10174 638 LEEARRREDNLADNSQQLQLEElmgalEKTRQELDATKARLSSTQQSL 685
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1442-1744 |
7.69e-07 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 54.74 E-value: 7.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1442 IQKQLEAINDKLQnkiQEIYEKEEQFNIKQisEVQEKVNEL---KQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQ 1518
Cdd:pfam17380 277 IVQHQKAVSERQQ---QEKFEKMEQERLRQ--EKEEKAREVerrRKLEEAEKARQAEMDRQAAIYAEQERMAMERERELE 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1519 IMIKE--KEEMKRV-QEALQIERDQLKEnTKEIVAKMKESQEKEYQFLKMTAVNETQEkmceiEHLKEQFETQKLNLENI 1595
Cdd:pfam17380 352 RIRQEerKRELERIrQEEIAMEISRMRE-LERLQMERQQKNERVRQELEAARKVKILE-----EERQRKIQQQKVEMEQI 425
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1596 ETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVE--RDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLR 1673
Cdd:pfam17380 426 RAEQEEARQREVRRLEEERAREMERVRLEEQERQQQVErlRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERK 505
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462594594 1674 GIVSEKTNEISNMQKDLEHSNDAL-KAQDLKIQEELRIAHMHLKEQQETIDKLRgIVSEKTDKLSNMQKDLE 1744
Cdd:pfam17380 506 QAMIEEERKRKLLEKEMEERQKAIyEEERRREAEEERRKQQEMEERRRIQEQMR-KATEERSRLEAMERERE 576
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1452-1994 |
7.86e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 54.73 E-value: 7.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1452 KLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQ 1531
Cdd:pfam05483 78 RLYSKLYKEAEKIKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKENNATRHLC 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1532 EALQIERDQLKENTKEIvakmkESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHENLE 1611
Cdd:pfam05483 158 NLLKETCARSAEKTKKY-----EYEREETRQVYMDLNNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYK 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1612 EMRSVTKERDDLRSVEETLKVER-DQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLrgivsekTNEISNMQKDL 1690
Cdd:pfam05483 233 KEINDKEKQVSLLLIQITEKENKmKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHL-------TKELEDIKMSL 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1691 EHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKd 1770
Cdd:pfam05483 306 QRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITM- 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1771 vnETQKKVSEMEQLKKQIKDQSLTLskleienlnlaQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQ--ETK 1848
Cdd:pfam05483 385 --ELQKKSSELEEMTKFKNNKEVEL-----------EELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQarEKE 451
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1849 ARDLEIQqeLKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKki 1928
Cdd:pfam05483 452 IHDLEIQ--LTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKK-- 527
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2462594594 1929 nEMEQLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIRIVAKERDELRRIKESLKMERDQFIATL 1994
Cdd:pfam05483 528 -QEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKIL 592
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1622-1843 |
8.93e-07 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 54.25 E-value: 8.93e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1622 DLRSVEETLKVERDQLKENLRETITRDLEK---QEELKIVHMHLKE-----------HQETIDKLR-------GIVSEKT 1680
Cdd:PHA02562 161 DISVLSEMDKLNKDKIRELNQQIQTLDMKIdhiQQQIKTYNKNIEEqrkkngeniarKQNKYDELVeeaktikAEIEELT 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1681 NEISNMQKDLEHSNDALK-----AQDLKIQEEL--RIAHMHLKEQQ-----ETIDKLRGIVSEKTDKLSNMQKDLEnsna 1748
Cdd:PHA02562 241 DELLNLVMDIEDPSAALNklntaAAKIKSKIEQfqKVIKMYEKGGVcptctQQISEGPDRITKIKDKLKELQHSLE---- 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1749 KLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQ----LKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERD 1824
Cdd:PHA02562 317 KLDTAIDELEEIMDEFNEQSKKLLELKNKISTNKQslitLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKS 396
|
250
....*....|....*....
gi 2462594594 1825 NLRRVEETLKLERDQLKES 1843
Cdd:PHA02562 397 ELVKEKYHRGIVTDLLKDS 415
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1804-2003 |
9.48e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.61 E-value: 9.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1804 NLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKtarmlskehketvdKLREKISEKT 1883
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELA--------------ALEAELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1884 IQISDIQKDLDKSKDELQKKIQELQK----KELQLLRVKEDVNMSHKKINEMEQLKKQFEAQNLSMQSVRMDNFQLTKKL 1959
Cdd:COG4942 90 KEIAELRAELEAQKEELAELLRALYRlgrqPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAEL 169
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 2462594594 1960 HESLEEIRIVAKERDELRRIKESLKMERDQFIATLREMIARDRQ 2003
Cdd:COG4942 170 EAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAA 213
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1456-2119 |
9.61e-07 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 54.84 E-value: 9.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1456 KIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIK-EKEEMKRVQEAL 1534
Cdd:pfam12128 245 KLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGELSaADAAVAKDRSEL 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1535 QIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLeNIETENIRLTQILHENLEEMR 1614
Cdd:pfam12128 325 EALEDQHGAFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRS-KIKEQNNRDIAGIKDKLAKIR 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1615 SV-----TKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEktneISNMQKD 1689
Cdd:pfam12128 404 EArdrqlAVAEDDLQALESELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATATPELLLQLENFDER----IERAREE 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1690 LEHSNdalkAQDLKIQEELRiahmhlkeqqetidKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLIT-LK 1768
Cdd:pfam12128 480 QEAAN----AEVERLQSELR--------------QARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHfLR 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1769 KDV---NETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLH-ENLEEMKSVMkerdnlrrVEETLKLERDQLKESL 1844
Cdd:pfam12128 542 KEApdwEQSIGKVISPELLHRTDLDPEVWDGSVGGELNLYGVKLDlKRIDVPEWAA--------SEEELRERLDKAEEAL 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1845 QETKARDLEIQQELKTARM-LSKEHKETVDKLR--EKISEKTIQISDIQKDLdksKDELQKKIQELQKKELQLLRVKEdv 1921
Cdd:pfam12128 614 QSAREKQAAAEEQLVQANGeLEKASREETFARTalKNARLDLRRLFDEKQSE---KDKKNKALAERKDSANERLNSLE-- 688
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1922 nmSHKKINEMEQlKKQFEAQNLSMQSVRMdnfqltkklhESLEEIRIVAKERD-ELRRIKESLKMERDQF---IATLREM 1997
Cdd:pfam12128 689 --AQLKQLDKKH-QAWLEEQKEQKREART----------EKQAYWQVVEGALDaQLALLKAAIAARRSGAkaeLKALETW 755
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1998 IARDRQNHQVKPEKRL-LSDGQQHLTESLrEKCSRIKELLKRYSEMDDHYECLNRLSLDLEKEIEFQK--ELSMRVKANL 2074
Cdd:pfam12128 756 YKRDLASLGVDPDVIAkLKREIRTLERKI-ERIAVRRQEVLRYFDWYQETWLQRRPRLATQLSNIERAisELQQQLARLI 834
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 2462594594 2075 SLPYLQTKHIEKLFTANQRCSMEFHRIMKKLKYVLSYVTKIKEEQ 2119
Cdd:pfam12128 835 ADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLATLKEDA 879
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1735-2074 |
9.67e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 54.56 E-value: 9.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1735 KLSNMQKDLEnsnaKLQEKIQELKAnehQLITLKKDVNETQKKvsemEQLKKQIKDQSLTLSKLEIENLNLAQKLHEnle 1814
Cdd:COG1196 180 KLEATEENLE----RLEDILGELER---QLEPLERQAEKAERY----RELKEELKELEAELLLLKLRELEAELEELE--- 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1815 emksvmKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLD 1894
Cdd:COG1196 246 ------AELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLE 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1895 KSKDELQKKIQELQKKELQLLRVKEdvnmshkkinEMEQLKKQFEAQNLSMQsvrmdnfQLTKKLHESLEEIRIVAKERD 1974
Cdd:COG1196 320 ELEEELAELEEELEELEEELEELEE----------ELEEAEEELEEAEAELA-------EAEEALLEAEAELAEAEEELE 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1975 ELRRIKESLKMERDQFIATLREMIARDRQNHQvkpEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMDDHYECLNRLSL 2054
Cdd:COG1196 383 ELAEELLEALRAAAELAAQLEELEEAEEALLE---RLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEE 459
|
330 340
....*....|....*....|
gi 2462594594 2055 DLEKEIEFQKELSMRVKANL 2074
Cdd:COG1196 460 ALLELLAELLEEAALLEAAL 479
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1220-1466 |
1.09e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.61 E-value: 1.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1220 EQELLPNVKEVSETQETMNElellTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQ 1299
Cdd:COG4942 26 EAELEQLQQEIAELEKELAA----LKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1300 LKEHIRETLAKIQESQSKQEQSLnmkekdnettkivsemeQFKPKDSALLRIEIEMLG-LSKRLQEshdEMKSVAKEKDD 1378
Cdd:COG4942 102 QKEELAELLRALYRLGRQPPLAL-----------------LLSPEDFLDAVRRLQYLKyLAPARRE---QAEELRADLAE 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1379 LQRLQEVLQSESDQLKENIKEIVAKHLETEEElkvahccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQ 1458
Cdd:COG4942 162 LAALRAELEAERAELEALLAELEEERAALEAL-------KAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
....*...
gi 2462594594 1459 EIYEKEEQ 1466
Cdd:COG4942 235 EAAAAAER 242
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
747-952 |
1.20e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.61 E-value: 1.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 747 SELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLH 826
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 827 MDFEQKYKMVLEENERMNQ----EIVNLSKEAQKFDSSLGALKtelsYKTQELQEKTREVQERLNEMEQLKEQLENRDST 902
Cdd:COG4942 100 EAQKEELAELLRALYRLGRqpplALLLSPEDFLDAVRRLQYLK----YLAPARREQAEELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 2462594594 903 LQTVEREKTLITEKLQQTLEE----VKTLTQEKDDLKQLQESLQIERDQLKSDI 952
Cdd:COG4942 176 LEALLAELEEERAALEALKAErqklLARLEKELAELAAELAELQQEAEELEALI 229
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
577-885 |
1.37e-06 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 54.31 E-value: 1.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 577 LSSKVELLREKEDQIKKLQEYIDSQKLENIK---------MDLSYSLESIEDPKQMKQTLfDAETVALDAKRESAFLRSE 647
Cdd:COG5022 805 LLGSRKEYRSYLACIIKLQKTIKREKKLRETeevefslkaEVLIQKFGRSLKAKKRFSLL-KKETIYLQSAQRVELAERQ 883
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 648 NLELKEKMKELATTYKQMENDIQLYqsqLEAKKKMQVDLEKELQSAFNEITKLTSLIDG---KVPKDL-LCNLELEGKIT 723
Cdd:COG5022 884 LQELKIDVKSISSLKLVNLELESEI---IELKKSLSSDLIENLEFKTELIARLKKLLNNidlEEGPSIeYVKLPELNKLH 960
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 724 DLQKELNKEVEE-NEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKlfsevvhkesrvqglLEEIGKTK 802
Cdd:COG5022 961 EVESKLKETSEEyEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQ---------------LKELPVEV 1025
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 803 DDLATTQSNYKSTDQEFQNFKTLHmdfEQKYKMVLEENE-RMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTRE 881
Cdd:COG5022 1026 AELQSASKIISSESTELSILKPLQ---KLKGLLLLENNQlQARYKALKLRRENSLLDDKQLYQLESTENLLKTINVKDLE 1102
|
....
gi 2462594594 882 VQER 885
Cdd:COG5022 1103 VTNR 1106
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1351-1996 |
1.51e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 53.96 E-value: 1.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1351 IEIEMLGLSKRLQESHDEMKSVAKEKDDLQ--------RLQEVLQSESDQLKEN---------IKEIVAKHLETEEELKV 1413
Cdd:pfam05483 97 IEAELKQKENKLQENRKIIEAQRKAIQELQfenekvslKLEEEIQENKDLIKENnatrhlcnlLKETCARSAEKTKKYEY 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1414 AHcclKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKD 1493
Cdd:pfam05483 177 ER---EETRQVYMDLNNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKE 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1494 SALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKeSQEKEYQFLKMTAVNETQE 1573
Cdd:pfam05483 254 NKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQK-ALEEDLQIATKTICQLTEE 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1574 KMCEIEHLKEQFETQKLNLENIETENIRLTQILHEnleEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQE 1653
Cdd:pfam05483 333 KEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRT---EQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEE 409
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1654 ELKIV--HMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSE 1731
Cdd:pfam05483 410 LKKILaeDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIE 489
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1732 KTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQ-KLH 1810
Cdd:pfam05483 490 LTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKcKLD 569
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1811 ENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQ 1890
Cdd:pfam05483 570 KSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAK 649
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1891 KDLDKSKDELQKKIQELQKKELQLLRVKEDVNMS---------------HKKINEMEQLKKQFEAQNLSMQSVRMDNFQL 1955
Cdd:pfam05483 650 QKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIadeavklqkeidkrcQHKIAEMVALMEKHKHQYDKIIEERDSELGL 729
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*.
gi 2462594594 1956 TKKLHESLEEIRI---------------VAKERDELRRIKESLKMERDQFIATLRE 1996
Cdd:pfam05483 730 YKNKEQEQSSAKAaleielsnikaellsLKKQLEIEKEEKEKLKMEAKENTAILKD 785
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1142-1846 |
1.72e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 53.69 E-value: 1.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1142 KSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEH--------QETIDELRRSVSEKTAQIINTQD----LEKSHTK 1209
Cdd:pfam12128 254 ESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLlrtlddqwKEKRDELNGELSAADAAVAKDRSeleaLEDQHGA 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1210 -LQEEIPVLHEEQELLPNVKevSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKT 1288
Cdd:pfam12128 334 fLDADIETAAADQEQLPSWQ--SELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQLA 411
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1289 IKEA-LEVKHDQLKEHIRETLAKIQESQSKQEQSL-NMKEKDNETTKIVSEMEQFKPKDSallrieiemlglskRLQESH 1366
Cdd:pfam12128 412 VAEDdLQALESELREQLEAGKLEFNEEEYRLKSRLgELKLRLNQATATPELLLQLENFDE--------------RIERAR 477
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1367 DEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINE-LRVNLSEKETEISTIQKQ 1445
Cdd:pfam12128 478 EEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHfLRKEAPDWEQSIGKVISP 557
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1446 LEAINDKLQNKIQEIYEKEE------QFNIKQIsEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQi 1519
Cdd:pfam12128 558 ELLHRTDLDPEVWDGSVGGElnlygvKLDLKRI-DVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGELE- 635
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1520 miKEKEEMKRVQEALQIERDQLKE--NTKEIVAKMKESQEKEYQFLKMTAVN--ETQEKMCEIEH--LKEQFETQKLNLE 1593
Cdd:pfam12128 636 --KASREETFARTALKNARLDLRRlfDEKQSEKDKKNKALAERKDSANERLNslEAQLKQLDKKHqaWLEEQKEQKREAR 713
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1594 NietenirltqilhENLEEMRSVTKERDD-LRSVEETLKVERDQLKenlRETITRDLEKQEELKivhmHLKEHQETIDKL 1672
Cdd:pfam12128 714 T-------------EKQAYWQVVEGALDAqLALLKAAIAARRSGAK---AELKALETWYKRDLA----SLGVDPDVIAKL 773
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1673 RGIVSEKTNEISNMQKDlehSNDALKAQDLkIQEELRIAHMHLKEQQETIDKLrgiVSEKTDKLSNMQKDLENSNAKLQe 1752
Cdd:pfam12128 774 KREIRTLERKIERIAVR---RQEVLRYFDW-YQETWLQRRPRLATQLSNIERA---ISELQQQLARLIADTKLRRAKLE- 845
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1753 kiQELKANEHQLITLkkdvnetqkkvsemeqlkkqikDQSLTLSKLEIENLNLAqKLHENLEEMKSVMKERdnLRRVEEt 1832
Cdd:pfam12128 846 --MERKASEKQQVRL----------------------SENLRGLRCEMSKLATL-KEDANSEQAQGSIGER--LAQLED- 897
|
730
....*....|....
gi 2462594594 1833 LKLERDQLKESLQE 1846
Cdd:pfam12128 898 LKLKRDYLSESVKK 911
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
686-1148 |
2.43e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 53.23 E-value: 2.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 686 LEKELQSAFNEITKLTslidGKVPKDLLCNLElegkitDLQKELNKEVEENEALREeviLLSELKSLPSEVERLRKEIQD 765
Cdd:COG4717 47 LLERLEKEADELFKPQ----GRKPELNLKELK------ELEEELKEAEEKEEEYAE---LQEELEELEEELEELEAELEE 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 766 KSEELhiitsekdklfsEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQ 845
Cdd:COG4717 114 LREEL------------EKLEKLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEE 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 846 EIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKT-------------- 911
Cdd:COG4717 182 LLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEarlllliaaallal 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 912 -----------------------LITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRN 968
Cdd:COG4717 262 lglggsllsliltiagvlflvlgLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLE 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 969 ALESLKQHQETINTLKSKISEevsrnLHMEENTGETKDEFQQKTIENQEELRLLGDELKKQQEIVAQEKN-----HAIKK 1043
Cdd:COG4717 342 LLDRIEELQELLREAEELEEE-----LQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEEleeqlEELLG 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1044 EGELSRTCDRLAEVEEKLKEKSQQLQEkqqqllnVQEEMSEMQKKINEIENLKNELKNKElTLEHMETERLELAQKLNEN 1123
Cdd:COG4717 417 ELEELLEALDEEELEEELEELEEELEE-------LEEELEELREELAELEAELEQLEEDG-ELAELLQELEELKAELREL 488
|
490 500
....*....|....*....|....*
gi 2462594594 1124 YEEVKSITKERKVLKELQKSFETER 1148
Cdd:COG4717 489 AEEWAALKLALELLEEAREEYREER 513
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1748-2046 |
2.66e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.38 E-value: 2.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1748 AKLQEKIQELKAnehqlitLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKL------EIENLNLAQKLHENLEEMKSVMK 1821
Cdd:COG4913 610 AKLAALEAELAE-------LEEELAEAEERLEALEAELDALQERREALQRLaeyswdEIDVASAEREIAELEAELERLDA 682
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1822 ERDNLRRVE---ETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISD---IQKDLDK 1895
Cdd:COG4913 683 SSDDLAALEeqlEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEerfAAALGDA 762
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1896 SKDELQKKIQELQKKELQLLRVKEDvnmshKKINEMEQLKKQF--EAQNLSMQSVRMDNFQltkKLHESLEEIRIVAKER 1973
Cdd:COG4913 763 VERELRENLEERIDALRARLNRAEE-----ELERAMRAFNREWpaETADLDADLESLPEYL---ALLDRLEEDGLPEYEE 834
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1974 DELRRIKESLKMERDQFIATLREMI--ARDR--------QNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMD 2043
Cdd:COG4913 835 RFKELLNENSIEFVADLLSKLRRAIreIKERidplndslKRIPFGPGRYLRLEARPRPDPEVREFRQELRAVTSGASLFD 914
|
...
gi 2462594594 2044 DHY 2046
Cdd:COG4913 915 EEL 917
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
485-1246 |
2.88e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 53.13 E-value: 2.88e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 485 NPATKLLNQENIESELN----SLRAD--------YDNLVLDyEQLRTEKEEMELKLKEKNDLDEFEALERKTKKDQEMQL 552
Cdd:TIGR00606 332 NKERRLLNQEKTELLVEqgrlQLQADrhqehiraRDSLIQS-LATRLELDGFERGPFSERQIKNFHTLVIERQEDEAKTA 410
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 553 IHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSQK--LENIKMDLSYSLESIEDPKQMKQTLFDA 630
Cdd:TIGR00606 411 AQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIkeLQQLEGSSDRILELDQELRKAERELSKA 490
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 631 ETVALDA--KRESAFLRSENLELKEKMKELATTYKQMENDIQ-LYQSQLEAKKKMQVDLE-------------------- 687
Cdd:TIGR00606 491 EKNSLTEtlKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTtRTQMEMLTKDKMDKDEQirkiksrhsdeltsllgyfp 570
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 688 --KELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQD 765
Cdd:TIGR00606 571 nkKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEESDLERLKEEIEK 650
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 766 KSEELHII---TSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLattqsnykstdQEFQNfktlhmDFEQKYKMVLEENER 842
Cdd:TIGR00606 651 SSKQRAMLagaTAVYSQFITQLTDENQSCCPVCQRVFQTEAEL-----------QEFIS------DLQSKLRLAPDKLKS 713
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 843 MNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTL---------I 913
Cdd:TIGR00606 714 TESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESakvcltdvtI 793
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 914 TEKLQQTLEEV-KTLTQEKDDLKQLQESLQI-ERDQLKSDIHDTVNMNIDTQEQLRNALEslkQHQETINTLKSKISEEV 991
Cdd:TIGR00606 794 MERFQMELKDVeRKIAQQAAKLQGSDLDRTVqQVNQEKQEKQHELDTVVSKIELNRKLIQ---DQQEQIQHLKSKTNELK 870
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 992 SRNLHMEENTGEtKDEFQQKTIENQEELRLLGDELKKQQEivaQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEK 1071
Cdd:TIGR00606 871 SEKLQIGTNLQR-RQQFEEQLVELSTEVQSLIREIKDAKE---QDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDI 946
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1072 QQQLLNVQEEMSEMQKKINEienlknelkNKELTLEHMETERLELAQKLNENYEEVKSITKErkvLKELQKSFETErdHL 1151
Cdd:TIGR00606 947 KEKVKNIHGYMKDIENKIQD---------GKDDYLKQKETELNTVNAQLEECEKHQEKINED---MRLMRQDIDTQ--KI 1012
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1152 RGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRrsvsektaqiinTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVS 1231
Cdd:TIGR00606 1013 QERWLQDNLTLRKRENELKEVEEELKQHLKEMGQMQ------------VLQMKQEHQKLEENIDLIKRNHVLALGRQKGY 1080
|
810
....*....|....*
gi 2462594594 1232 ETQETMNELELLTEQ 1246
Cdd:TIGR00606 1081 EKEIKHFKKELREPQ 1095
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1367-1561 |
3.89e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 51.75 E-value: 3.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1367 DEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEElkvahccLKEQEETINELrvnlsekETEISTIQKQL 1446
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAE-------LEALQAEIDKL-------QAEIAEAEAEI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1447 EAINDKLQNKIQEIYEKEEQFN--------------------IKQISE-VQEKVNELKQFKEHRKAKDSALQSIESKMLE 1505
Cdd:COG3883 82 EERREELGERARALYRSGGSVSyldvllgsesfsdfldrlsaLSKIADaDADLLEELKADKAELEAKKAELEAKLAELEA 161
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 2462594594 1506 LTNRLQESQEEIQimiKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQ 1561
Cdd:COG3883 162 LKAELEAAKAELE---AQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAA 214
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1742-2067 |
4.02e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 52.37 E-value: 4.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1742 DLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMK 1821
Cdd:PRK03918 159 DYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKE 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1822 ERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKE---------TVDKLREKISEKTIQISDIQKD 1892
Cdd:PRK03918 239 EIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKElkekaeeyiKLSEFYEEYLDELREIEKRLSR 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1893 LDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEaqnlsMQSVRMDNFQLTKKlHESLEEIRIVAKE 1972
Cdd:PRK03918 319 LEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYE-----EAKAKKEELERLKK-RLTGLTPEKLEKE 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1973 RDELRRIKESLKMERDQFIATLREMIARDRQNHQVKPE-----------KRLLSDgqQHLTESLREKCSRIKELLKRYSE 2041
Cdd:PRK03918 393 LEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEElkkakgkcpvcGRELTE--EHRKELLEEYTAELKRIEKELKE 470
|
330 340
....*....|....*....|....*.
gi 2462594594 2042 MDDHYECLNRLSLDLEKEIEFQKELS 2067
Cdd:PRK03918 471 IEEKERKLRKELRELEKVLKKESELI 496
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1028-1468 |
4.05e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 52.46 E-value: 4.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1028 KQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVqEEMSEMQKKINEIENLKNELKNKELTLE 1107
Cdd:COG4717 71 KELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKL-EKLLQLLPLYQELEALEAELAELPERLE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1108 HMETERLELAQKLNEnyeevksITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELR 1187
Cdd:COG4717 150 ELEERLEELRELEEE-------LEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEEL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1188 RSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEE---QELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARiemERLR 1264
Cdd:COG4717 223 EELEEELEQLENELEAAALEERLKEARLLLLIAaalLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAR---EKAS 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1265 LNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQsLNMKEKDNETTKIVSEMEQFkpk 1344
Cdd:COG4717 300 LGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLRE-AEELEEELQLEELEQEIAAL--- 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1345 dsallrieiemlgLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAK-HLETEEELKVAHCCLKEQEE 1423
Cdd:COG4717 376 -------------LAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELlEALDEEELEEELEELEEELE 442
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 2462594594 1424 TINELRVNLSEKETEISTIQKQLEAiNDKLQNKIQEIYEKEEQFN 1468
Cdd:COG4717 443 ELEEELEELREELAELEAELEQLEE-DGELAELLQELEELKAELR 486
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1291-1874 |
4.90e-06 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 52.21 E-value: 4.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1291 EALEVKHDQLKEHIRETLAKIQESQSKQEQslnMKEKDNETTKIVSEMEQFKPKDSALLR----IEIEMLGLSKRLQESH 1366
Cdd:PRK01156 162 NSLERNYDKLKDVIDMLRAEISNIDYLEEK---LKSSNLELENIKKQIADDEKSHSITLKeierLSIEYNNAMDDYNNLK 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1367 DEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINE---LRVNLSEKETEISTIQ 1443
Cdd:PRK01156 239 SALNELSSLEDMKNRYESEIKTAESDLSMELEKNNYYKELEERHMKIINDPVYKNRNYINDyfkYKNDIENKKQILSNID 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1444 KQLEAINDKLQnKIQEIYEKEEQFNIKQiSEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQ-------EE 1516
Cdd:PRK01156 319 AEINKYHAIIK-KLSVLQKDYNDYIKKK-SRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIErmsafisEI 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1517 IQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEK--MC-------EIEHLKEQFET 1587
Cdd:PRK01156 397 LKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVcpVCgttlgeeKSNHIINHYNE 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1588 QKLNLEnietENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVE-RDQLKENLRETITRDLEKQEELKIVHMHLKEHQ 1666
Cdd:PRK01156 477 KKSRLE----EKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSInEYNKIESARADLEDIKIKINELKDKHDKYEEIK 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1667 ETIDKLrgivsektnEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQ-QETIDKLRGIVSEKTDKLS---NMQKD 1742
Cdd:PRK01156 553 NRYKSL---------KLEDLDSKRTSWLNALAVISLIDIETNRSRSNEIKKQlNDLESRLQEIEIGFPDDKSyidKSIRE 623
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1743 LENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEiENLNLAQKlhenleEMKSVMKE 1822
Cdd:PRK01156 624 IENEANNLNNKYNEIQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIE-DNLKKSRK------ALDDAKAN 696
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|..
gi 2462594594 1823 RDNLRRVEETLKLERDQLKESLQETKaRDLEIQQELKTARMLSKEHKETVDK 1874
Cdd:PRK01156 697 RARLESTIEILRTRINELSDRINDIN-ETLESMKKIKKAIGDLKRLREAFDK 747
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
913-1477 |
5.11e-06 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 52.21 E-value: 5.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 913 ITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRN---ALESLKQHQETINTLKSKISE 989
Cdd:PRK01156 188 LEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNElssLEDMKNRYESEIKTAESDLSM 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 990 EVSRNLHMEENTGETKDEFQQKTIENQEELR---LLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQ 1066
Cdd:PRK01156 268 ELEKNNYYKELEERHMKIINDPVYKNRNYINdyfKYKNDIENKKQILSNIDAEINKYHAIIKKLSVLQKDYNDYIKKKSR 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1067 QLQEKQQQLlNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKE-RKVLKELQ---K 1142
Cdd:PRK01156 348 YDDLNNQIL-ELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEiNVKLQDISskvS 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1143 SFETERDHLRGYIREIE--ATGLQTKEELKIAHIHLKEhqETIDELRRSVSEKTAQIINTQD-LEKSHTKLQEEIPVLHE 1219
Cdd:PRK01156 427 SLNQRIRALRENLDELSrnMEMLNGQSVCPVCGTTLGE--EKSNHIINHYNEKKSRLEEKIReIEIEVKDIDEKIVDLKK 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1220 EQELLpNVKEVSETQETMNELELLtEQSTTKDSTTLARIEMERLrlneKFQESQEEIKSLTKERDNLKtikealevKHDQ 1299
Cdd:PRK01156 505 RKEYL-ESEEINKSINEYNKIESA-RADLEDIKIKINELKDKHD----KYEEIKNRYKSLKLEDLDSK--------RTSW 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1300 LKEHIRETLAKIQESQS-KQEQSLNMKEKDNETTKIVSEMEQFKP-KDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKD 1377
Cdd:PRK01156 571 LNALAVISLIDIETNRSrSNEIKKQLNDLESRLQEIEIGFPDDKSyIDKSIREIENEANNLNNKYNEIQENKILIEKLRG 650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1378 DLQRLQEVLqSESDQLKENIKEIVAKHLETEEElkvahccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLqNKI 1457
Cdd:PRK01156 651 KIDNYKKQI-AEIDSIIPDLKEITSRINDIEDN-------LKKSRKALDDAKANRARLESTIEILRTRINELSDRI-NDI 721
|
570 580
....*....|....*....|
gi 2462594594 1458 QEIYEKEEQFnIKQISEVQE 1477
Cdd:PRK01156 722 NETLESMKKI-KKAIGDLKR 740
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
850-1311 |
5.89e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 51.69 E-value: 5.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 850 LSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQtLEEVKTLTQ 929
Cdd:COG4717 51 LEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEK-LEKLLQLLP 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 930 EKDDLKQLQESLQIERDQLksdihdtvnmnidtqEQLRNALESLKQHQETINTLKSKISE-EVSRNLHMEENTGETKDEF 1008
Cdd:COG4717 130 LYQELEALEAELAELPERL---------------EELEERLEELRELEEELEELEAELAElQEELEELLEQLSLATEEEL 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1009 QQkTIENQEELRLLGDELKKQQEiVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQL---------QEKQQQLLNVQ 1079
Cdd:COG4717 195 QD-LAEELEELQQRLAELEEELE-EAQEELEELEEELEQLENELEAAALEERLKEARLLLliaaallalLGLGGSLLSLI 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1080 EEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNE-NYEEVKSITKERKVLKELQKSFETERDHLRGYIREI 1158
Cdd:COG4717 273 LTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEElEEEELEELLAALGLPPDLSPEELLELLDRIEELQEL 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1159 EATGLQTKEELKIAHIHLKEHQ-------ETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHE----------EQ 1221
Cdd:COG4717 353 LREAEELEEELQLEELEQEIAAllaeagvEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEEllealdeeelEE 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1222 ELLPNVKEVSETQETMNEL-----ELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVK 1296
Cdd:COG4717 433 ELEELEEELEELEEELEELreelaELEAELEQLEEDGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREE 512
|
490
....*....|....*.
gi 2462594594 1297 H-DQLKEHIRETLAKI 1311
Cdd:COG4717 513 RlPPVLERASEYFSRL 528
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1836-2067 |
6.02e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.30 E-value: 6.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1836 ERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLL 1915
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1916 RVKEDVNM---SHKKINEMEQLKKQFEAQNLSMQSVRMDNFQ-LTKKLHESLEEIRivaKERDELRRIKESLKMERDQFI 1991
Cdd:COG4942 101 AQKEELAEllrALYRLGRQPPLALLLSPEDFLDAVRRLQYLKyLAPARREQAEELR---ADLAELAALRAELEAERAELE 177
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2462594594 1992 ATLREMIARDRQNHQVKPEKRLLsdgQQHLTESLREKCSRIKELLKRYSEmddhyecLNRLSLDLEKEIEFQKELS 2067
Cdd:COG4942 178 ALLAELEEERAALEALKAERQKL---LARLEKELAELAAELAELQQEAEE-------LEALIARLEAEAAAAAERT 243
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1694-1894 |
6.05e-06 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 51.55 E-value: 6.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1694 NDALKAQDLK---IQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQEL-KANEHQLITLKK 1769
Cdd:PHA02562 180 NQQIQTLDMKidhIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDELLNLvMDIEDPSAALNK 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1770 DVNETQKKVSEMEQLKK----------------QIKDQSLTLSKLEIENLNLAQKLH---ENLEEMKSVMKERDNLRRVE 1830
Cdd:PHA02562 260 LNTAAAKIKSKIEQFQKvikmyekggvcptctqQISEGPDRITKIKDKLKELQHSLEkldTAIDELEEIMDEFNEQSKKL 339
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462594594 1831 ETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLD 1894
Cdd:PHA02562 340 LELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKEKY 403
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1261-1481 |
6.56e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.92 E-value: 6.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1261 ERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSK-QEQSLNMKEKDNETTKIVSEME 1339
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQElAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1340 QFKPKDSALLRiEIEMLGLSKRLQE--SHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCC 1417
Cdd:COG4942 101 AQKEELAELLR-ALYRLGRQPPLALllSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462594594 1418 LKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEiyEKEEQFNIKQISEVQEKVNE 1481
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQE--AEELEALIARLEAEAAAAAE 241
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1749-1910 |
7.71e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 49.54 E-value: 7.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1749 KLQEKIQELKANEHQLITLKKDVNETQKKV----SEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVM--KE 1822
Cdd:COG1579 11 DLQELDSELDRLEHRLKELPAELAELEDELaaleARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRnnKE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1823 RDNLRRVEETLKLERDQLKESLQETKARDLEIQQELktarmlsKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQK 1902
Cdd:COG1579 91 YEALQKEIESLKRRISDLEDEILELMERIEELEEEL-------AELEAELAELEAELEEKKAELDEELAELEAELEELEA 163
|
....*...
gi 2462594594 1903 KIQELQKK 1910
Cdd:COG1579 164 EREELAAK 171
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
719-923 |
8.00e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 50.98 E-value: 8.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 719 EGKITDLQKELNKEVEENEALREEvillseLKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEI 798
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAE------LDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREEL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 799 GKTKDDLATTQSNYKSTDQEF--QNFKtlhmDFEQKYKMVLEENERmNQEIVNLSKEAQKfdsSLGALKTELSYKTQELQ 876
Cdd:COG3883 89 GERARALYRSGGSVSYLDVLLgsESFS----DFLDRLSALSKIADA-DADLLEELKADKA---ELEAKKAELEAKLAELE 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2462594594 877 EKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEE 923
Cdd:COG3883 161 ALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAA 207
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
1601-1968 |
8.53e-06 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 51.38 E-value: 8.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1601 RLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKivhmhlkehqETIDKLRgivsekt 1680
Cdd:PRK04778 109 EIESLLDLIEEDIEQILEELQELLESEEKNREEVEQLKDLYRELRKSLLANRFSFG----------PALDELE------- 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1681 NEISNMQKDLEhsndalKAQDLKIQEELRIAHMHLKEQQETIDKLRgivsEKTDKLSNMQKDLENsnaKLQEKIQELKAN 1760
Cdd:PRK04778 172 KQLENLEEEFS------QFVELTESGDYVEAREILDQLEEELAALE----QIMEEIPELLKELQT---ELPDQLQELKAG 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1761 EHQLITlKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLN-LAQKLHENLEEMKSVM-KERDNLRRVEETLKLERD 1838
Cdd:PRK04778 239 YRELVE-EGYHLDHLDIEKEIQDLKEQIDENLALLEELDLDEAEeKNEEIQERIDQLYDILeREVKARKYVEKNSDTLPD 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1839 QLKESLQETKARDLEIQQ----------ELKTARMLSKEHKET---VDKLREKISEKTIQISDIQKDLDKSKDELqKKIQ 1905
Cdd:PRK04778 318 FLEHAKEQNKELKEEIDRvkqsytlnesELESVRQLEKQLESLekqYDEITERIAEQEIAYSELQEELEEILKQL-EEIE 396
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462594594 1906 ELQKK---ELQLLRVKEDVnmSHKKINEMEQ----LKKQFEAQNLSMQSVR-MDNFQLT----KKLHESLEEIRI 1968
Cdd:PRK04778 397 KEQEKlseMLQGLRKDELE--AREKLERYRNklheIKRYLEKSNLPGLPEDyLEMFFEVsdeiEALAEELEEKPI 469
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1648-2411 |
8.69e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 51.66 E-value: 8.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1648 DLEKQEELKIVHMHLKEHQETIdklrgiVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRG 1727
Cdd:pfam15921 58 EVELDSPRKIIAYPGKEHIERV------LEEYSHQVKDLQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMAD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1728 IVSEKtdklSNMQKDLENsnaKLQEKIQELKANEhqliTLKKDVNETQKkvSEMEQLKKQIKDQSLTLSKLEIENLNLAQ 1807
Cdd:pfam15921 132 IRRRE----SQSQEDLRN---QLQNTVHELEAAK----CLKEDMLEDSN--TQIEQLRKMMLSHEGVLQEIRSILVDFEE 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1808 ----KLHEnlEEMKSVMKERDNLRRVEETLKlerdQLKESLQETKARDLEIQQELKTARMLSKEHKETV-----DKLREK 1878
Cdd:pfam15921 199 asgkKIYE--HDSMSTMHFRSLGSAISKILR----ELDTEISYLKGRIFPVEDQLEALKSESQNKIELLlqqhqDRIEQL 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1879 ISEKTIQISDIQKDLDKSKDE---LQKKIQELQKKelqllrVKEDVNMSHKKINEMEQLKKQFEAQNLSMQSVRMDNF-Q 1954
Cdd:pfam15921 273 ISEHEVEITGLTEKASSARSQansIQSQLEIIQEQ------ARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIeE 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1955 LTKKLHESLEEIRIVAKERDELRRIKESLKMERDQFIATL----REMIARDRQNHQVKPEKRLLSDGQQHLTESLREK-- 2028
Cdd:pfam15921 347 LEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLhkreKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRnm 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2029 -CSRIKELLKRYS-----EMDDHYECLNRLSLDLEKEIEFQKELSmrvkanlSLPYLQTKHIEKLfTANQRCSMEFHRIM 2102
Cdd:pfam15921 427 eVQRLEALLKAMKsecqgQMERQMAAIQGKNESLEKVSSLTAQLE-------STKEMLRKVVEEL-TAKKMTLESSERTV 498
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2103 KKLKYVLSYVTKIKEEQHESINKFEMDF---IDEVEKQKELLIKIQHLQQDCDVpsrelrdLKLNQNMDLHIEEILKDFS 2179
Cdd:pfam15921 499 SDLTASLQEKERAIEATNAEITKLRSRVdlkLQELQHLKNEGDHLRNVQTECEA-------LKLQMAEKDKVIEILRQQI 571
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2180 ESEFPSIKTEFQQVLSNRKEMTQFLEEWLNTRFDIEKLKNGIQKENDRICQVNNFFNN---RIIAIMNESTEFEERSATI 2256
Cdd:pfam15921 572 ENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDlelEKVKLVNAGSERLRAVKDI 651
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2257 SKEWEQDLKSLKE-KNE--KLFKNYQTLKTSLASGAQVNPTTQDNKNPHVTSRATQLttekiRELENSLHEAKESAMHKE 2333
Cdd:pfam15921 652 KQERDQLLNEVKTsRNElnSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSEL-----EQTRNTLKSMEGSDGHAM 726
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462594594 2334 SKIIKMQKELEVTNDIIAKLQAKVHESNKCLEKTKETIQVLqdkvalgakpyKEEIEDLKMKLVKIDLEKMKNAKEFE 2411
Cdd:pfam15921 727 KVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFL-----------KEEKNKLSQELSTVATEKNKMAGELE 793
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
1602-1968 |
9.63e-06 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 51.01 E-value: 9.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1602 LTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELkivhmhlkehQETIDKLrgivsekTN 1681
Cdd:pfam06160 91 IEELLDDIEEDIKQILEELDELLESEEKNREEVEELKDKYRELRKTLLANRFSY----------GPAIDEL-------EK 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1682 EISNMQKDLEHSNDALKAQDLkiqEElriAHMHLKEQQETIDKLRgivsEKTDKLSNMQKDLENsnaKLQEKIQELKANE 1761
Cdd:pfam06160 154 QLAEIEEEFSQFEELTESGDY---LE---AREVLEKLEEETDALE----ELMEDIPPLYEELKT---ELPDQLEELKEGY 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1762 HQLItlKKDVNETQKKV-SEMEQLKKQIKDQSLTLSKLEIENLNLA-QKLHENLEEM-----------KSVMKERDNLRR 1828
Cdd:pfam06160 221 REME--EEGYALEHLNVdKEIQQLEEQLEENLALLENLELDEAEEAlEEIEERIDQLydllekevdakKYVEKNLPEIED 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1829 VEETLKLERDQLKESLQETKAR------DLEIQQELKTARmlsKEHKETVDKLREKISEKTI---QISDIQKDLDKSKDE 1899
Cdd:pfam06160 299 YLEHAEEQNKELKEELERVQQSytlnenELERVRGLEKQL---EELEKRYDEIVERLEEKEVaysELQEELEEILEQLEE 375
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2462594594 1900 LQKKIQELQKKeLQLLRVKEDV--NMSHKKINEMEQLKKQFEAQNLSMQSVRMDNF-----QLTKKLHESLEEIRI 1968
Cdd:pfam06160 376 IEEEQEEFKES-LQSLRKDELEarEKLDEFKLELREIKRLVEKSNLPGLPESYLDYffdvsDEIEDLADELNEVPL 450
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1780-2001 |
1.25e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.07 E-value: 1.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1780 EMEQLKKQIKdqslTLSKLEienlnlaqKLHENLEEMKSvmkERDNLRRVEETLKLERDQLKESLQETKARDLE-----I 1854
Cdd:COG4913 243 ALEDAREQIE----LLEPIR--------ELAERYAAARE---RLAELEYLRAALRLWFAQRRLELLEAELEELRaelarL 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1855 QQELKTARMLSKEHKETVDKLREKISE-KTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEM-E 1932
Cdd:COG4913 308 EAELERLEARLDALREELDELEAQIRGnGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALrA 387
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462594594 1933 QLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIRIVAKERDELRRIKESLkmerDQFIATLREMIARD 2001
Cdd:COG4913 388 EAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNI----PARLLALRDALAEA 452
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1017-1168 |
1.31e-05 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 50.55 E-value: 1.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1017 EELRLLGDELKKQQEIVAQEKNHAIKKEGElsrtcdrlAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLK 1096
Cdd:PRK12704 45 EEAKKEAEAIKKEALLEAKEEIHKLRNEFE--------KELRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEKKE 116
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462594594 1097 NELKNKELTLEHMETERLELAQKLNENYEEVKSITKE---RKVLKELQKSFETERDHlrgYIREIEAtglQTKEE 1168
Cdd:PRK12704 117 KELEQKQQELEKKEEELEELIEEQLQELERISGLTAEeakEILLEKVEEEARHEAAV---LIKEIEE---EAKEE 185
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
470-1136 |
1.37e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 50.81 E-value: 1.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 470 DVFSNTLDTLSEIEWNPATKllNQENIESELNSLRADYDNLVLDYEQLRTEKEEMELKLKEKNdldefEALERKTKKDQE 549
Cdd:PRK02224 180 RVLSDQRGSLDQLKAQIEEK--EEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEAD-----EVLEEHEERREE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 550 MQ-LIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQ-----EYIDSQKLENIKMDLSYSLESIEDPKQM 623
Cdd:PRK02224 253 LEtLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLaeaglDDADAEAVEARREELEDRDEELRDRLEE 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 624 KQTLFDAETVALDAKRESAF-LRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTS 702
Cdd:PRK02224 333 CRVAAQAHNEEAESLREDADdLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAED 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 703 LIDgkvpkDLLCNL-ELEGKITDLQ---KELNKEVEENEALREEvillselkslpsevERLRKEIQDKSEELHIITSEKD 778
Cdd:PRK02224 413 FLE-----ELREERdELREREAELEatlRTARERVEEAEALLEA--------------GKCPECGQPVEGSPHVETIEED 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 779 KlfsevvhkesrvqgllEEIGKTKDDLATTQsnykstdqefqnfktlhmdfeqkykmvlEENERMNQEIvNLSKEAQKFD 858
Cdd:PRK02224 474 R----------------ERVEELEAELEDLE----------------------------EEVEEVEERL-ERAEDLVEAE 508
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 859 SSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQ 938
Cdd:PRK02224 509 DRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERI 588
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 939 ESLQIERDQLksdihdtvnmniDTQEQLRNALESLKQHQETINtlkskiseevsrnlhmeentgETKDEFQQKTIENQEE 1018
Cdd:PRK02224 589 ESLERIRTLL------------AAIADAEDEIERLREKREALA---------------------ELNDERRERLAEKRER 635
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1019 LRLLGDELKKQQEIVAQEKnhaiKKEGElsrtcDRLAEVEEKLKEKsqqlqekQQQLLNVQEEMSEMQKKINEIENLKNE 1098
Cdd:PRK02224 636 KRELEAEFDEARIEEARED----KERAE-----EYLEQVEEKLDEL-------REERDDLQAEIGAVENELEELEELRER 699
|
650 660 670
....*....|....*....|....*....|....*...
gi 2462594594 1099 LKNKELTLEHMETERLElAQKLNENYEEVKSITKERKV 1136
Cdd:PRK02224 700 REALENRVEALEALYDE-AEELESMYGDLRAELRQRNV 736
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
650-1559 |
1.78e-05 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 50.56 E-value: 1.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 650 ELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKL---TSLIDGKVPKDLLCNLELEGKITDLQ 726
Cdd:pfam01576 86 EEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLeedILLLEDQNSKLSKERKLLEERISEFT 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 727 KELNKEVEENEALREeviLLSELKSLPSEVE-RLRKEIQDKSEELHI---ITSEKDKLFSEVVHKESRVQGLLEEIGKTK 802
Cdd:pfam01576 166 SNLAEEEEKAKSLSK---LKNKHEAMISDLEeRLKKEEKGRQELEKAkrkLEGESTDLQEQIAELQAQIAELRAQLAKKE 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 803 DDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTEL--SYKTQELQEKTR 880
Cdd:pfam01576 243 EELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEELEALKTELedTLDTTAAQQELR 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 881 EVQERlnEMEQLKEQLE----NRDSTLQTVEREKTLITEKLQQTLEEVKtltQEKDDLKQLQESLQIERDQLKSDIHDTV 956
Cdd:pfam01576 323 SKREQ--EVTELKKALEeetrSHEAQLQEMRQKHTQALEELTEQLEQAK---RNKANLEKAKQALESENAELQAELRTLQ 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 957 NMNIDTQEQLRNALESLKQHQETINT---LKSKISEEVSRNLHMEENTGETKDEFQQKTIENQEELRLLGDELKKQQEIV 1033
Cdd:pfam01576 398 QAKQDSEHKRKKLEGQLQELQARLSEserQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELL 477
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1034 AQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKIN------------------EIENL 1095
Cdd:pfam01576 478 QEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEedagtlealeegkkrlqrELEAL 557
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1096 KNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFET--------------ERDHLRGYIREIEAT 1161
Cdd:pfam01576 558 TQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQmlaeekaisaryaeERDRAEAEAREKETR 637
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1162 GLQTKEELKIAHIHLKEHQETIDELRRS----VSEKTAQIINTQDLEKSHTKLQEeipvlheeqellpnvkEVSETQETM 1237
Cdd:pfam01576 638 ALSLARALEEALEAKEELERTNKQLRAEmedlVSSKDDVGKNVHELERSKRALEQ----------------QVEEMKTQL 701
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1238 NELEllTEQSTTKDSTTLARIEMERLRLNEkfqesqeeiksltkERDnLKTIKEALEVKHDQLKEHIRETLAKIQESQSK 1317
Cdd:pfam01576 702 EELE--DELQATEDAKLRLEVNMQALKAQF--------------ERD-LQARDEQGEEKRRQLVKQVRELEAELEDERKQ 764
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1318 QEQSLNMKEkdnettKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQEshdEMKSVAKEKDDLQRLQEVLQSESDQLKENI 1397
Cdd:pfam01576 765 RAQAVAAKK------KLELDLKELEAQIDAANKGREEAVKQLKKLQA---QMKDLQRELEEARASRDEILAQSKESEKKL 835
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1398 KEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIyeKEEQFNIKQISEVQE 1477
Cdd:pfam01576 836 KNLEAELLQLQEDLAASERARRQAQQERDELADEIASGASGKSALQDEKRRLEARIAQLEEEL--EEEQSNTELLNDRLR 913
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1478 KV--------NELKQFKEHRKAKDSALQSIESKMLELTNRLQEsqEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIV 1549
Cdd:pfam01576 914 KStlqveqltTELAAERSTSQKSESARQQLERQNKELKAKLQE--MEGTVKSKFKSSIAALEAKIAQLEEQLEQESRERQ 991
|
970
....*....|
gi 2462594594 1550 AKMKESQEKE 1559
Cdd:pfam01576 992 AANKLVRRTE 1001
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
512-785 |
1.95e-05 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 49.93 E-value: 1.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 512 LDYEQLRTEKEEMElKLKEKndLDEFEALERKTKKDQEMQLIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQI 591
Cdd:PRK05771 40 LSNERLRKLRSLLT-KLSEA--LDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVEEELEKIEKEIKELEEEISELENEI 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 592 KKLQEYIDS-QKLENIKMDLSYslesiedpkqmkqtLFDAETVALDAKRESAFLRSENLELKEKMKELATTYKQMENDIQ 670
Cdd:PRK05771 117 KELEQEIERlEPWGNFDLDLSL--------------LLGFKYVSVFVGTVPEDKLEELKLESDVENVEYISTDKGYVYVV 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 671 LYqsqleAKKKMQVDLEKELqsAFNEITKLtSLIDGKVPKDLLCNL-----ELEGKITDLQKELNK-------------E 732
Cdd:PRK05771 183 VV-----VLKELSDEVEEEL--KKLGFERL-ELEEEGTPSELIREIkeeleEIEKERESLLEELKElakkyleellalyE 254
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462594594 733 VEENEALREEViLLSELKS---------LPSE-VERLRKEIQDKSEELHIITSEKDKLFSEVV 785
Cdd:PRK05771 255 YLEIELERAEA-LSKFLKTdktfaiegwVPEDrVKKLKELIDKATGGSAYVEFVEPDEEEEEV 316
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1418-1615 |
2.14e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.38 E-value: 2.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1418 LKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNI--KQISEVQEKVNELKQFKEHRKaKDSA 1495
Cdd:COG4942 29 LEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAAleAELAELEKEIAELRAELEAQK-EELA 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1496 LQSIESKMLELTNRLQE--SQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKmKESQEKEYQFLKmTAVNETQE 1573
Cdd:COG4942 108 ELLRALYRLGRQPPLALllSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAAL-RAELEAERAELE-ALLAELEE 185
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 2462594594 1574 KMCEIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRS 1615
Cdd:COG4942 186 ERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEA 227
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1715-1915 |
2.52e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.77 E-value: 2.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1715 LKEQQETIDKLRG----IVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLkKQIKD 1790
Cdd:COG4717 51 LEKEADELFKPQGrkpeLNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKL-LQLLP 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1791 QSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARmlsKEHKE 1870
Cdd:COG4717 130 LYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEEL---EELQQ 206
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 2462594594 1871 TVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLL 1915
Cdd:COG4717 207 RLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLL 251
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
576-1049 |
3.01e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.38 E-value: 3.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 576 ELSSKVELLREKEDQIKKLQEYIDSqklenikmdLSYSLESIEDpkqmKQTLFDAETVALDAKRESAFLRSENLELKEKM 655
Cdd:COG4717 75 ELEEELKEAEEKEEEYAELQEELEE---------LEEELEELEA----ELEELREELEKLEKLLQLLPLYQELEALEAEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 656 KELATTYKQMENDIQLYQSQLEAKKKMQVDLEkELQSAFNEITKLTSLIDGKVPKDLLCNLE-LEGKITDLQKELNKEVE 734
Cdd:COG4717 142 AELPERLEELEERLEELRELEEELEELEAELA-ELQEELEELLEQLSLATEEELQDLAEELEeLQQRLAELEEELEEAQE 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 735 ENEALREEVILLSELKSLPSEVERLRKEIQDKSEE--LHIITSEKDKLFSEVVH---------------------KESRV 791
Cdd:COG4717 221 ELEELEEELEQLENELEAAALEERLKEARLLLLIAaaLLALLGLGGSLLSLILTiagvlflvlgllallflllarEKASL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 792 QGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQ------KFDSSLGALK 865
Cdd:COG4717 301 GKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQleeleqEIAALLAEAG 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 866 TELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTL--ITEKLQQTLEEVKTLTQEKDDLKQLQESLQI 943
Cdd:COG4717 381 VEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEeeLEEELEELEEELEELEEELEELREELAELEA 460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 944 ERDQLKSDihDTVNMNIDTQEQLRNALESLKQHQETINTLKSkiseevsrnlHMEENTGETKDEFQQKTIENQEEL---- 1019
Cdd:COG4717 461 ELEQLEED--GELAELLQELEELKAELRELAEEWAALKLALE----------LLEEAREEYREERLPPVLERASEYfsrl 528
|
490 500 510
....*....|....*....|....*....|...
gi 2462594594 1020 ---RLLGDELKKQQEIVAQEKNHAIKKEGELSR 1049
Cdd:COG4717 529 tdgRYRLIRIDEDLSLKVDTEDGRTRPVEELSR 561
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1737-1920 |
3.11e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 3.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1737 SNMQKDLENSNAKLQEKIQE----LKANEHQLITLKKDVNETQKKVSEMEQ----LKKQIKDQSLTLSKLEIENLNLAQK 1808
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAElekeLAALKKEEKALLKQLAALERRIAALARriraLEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1809 LHENLEEMKSVM-------------------------KERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARM 1863
Cdd:COG4942 99 LEAQKEELAELLralyrlgrqpplalllspedfldavRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEA 178
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 2462594594 1864 LSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKED 1920
Cdd:COG4942 179 LLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
838-1400 |
3.15e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.53 E-value: 3.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 838 EENERMNQEIVNLSKEAQKFDSSLGALKTELsyktQELQEKTREVQERLNE-----MEQLKEQLENRDSTLQTVEREktl 912
Cdd:COG4913 288 RRLELLEAELEELRAELARLEAELERLEARL----DALREELDELEAQIRGnggdrLEQLEREIERLERELEERERR--- 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 913 iTEKLQQTLEEVK-TLTQEKDDLKQLQESLQIERDQLKSDIHDTvnmnidtQEQLRNALESLKQHQETINTLKSKISEEV 991
Cdd:COG4913 361 -RARLEALLAALGlPLPASAEEFAALRAEAAALLEALEEELEAL-------EEALAEAEAALRDLRRELRELEAEIASLE 432
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 992 SRNLHMEENTGETKDEFQQKTIENQEELRLLGDELkkqqEIVAQEKN--HAIkkEGELS--RTC-----DRLAEV----- 1057
Cdd:COG4913 433 RRKSNIPARLLALRDALAEALGLDEAELPFVGELI----EVRPEEERwrGAI--ERVLGgfALTllvppEHYAAAlrwvn 506
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1058 EEKLKEKsqqlqekqqqllnVQ-EEMSEMQKKINEIENLKNELKNKELTLEHMETERL--ELAQKLN----ENYEEV--- 1127
Cdd:COG4913 507 RLHLRGR-------------LVyERVRTGLPDPERPRLDPDSLAGKLDFKPHPFRAWLeaELGRRFDyvcvDSPEELrrh 573
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1128 -KSITKERKVlkelqKSFETERDH-LRGYIREIEATGLQTKEelKIAHIhlkehQETIDELRRSVSEKTAQIINTQDLEK 1205
Cdd:COG4913 574 pRAITRAGQV-----KGNGTRHEKdDRRRIRSRYVLGFDNRA--KLAAL-----EAELAELEEELAEAEERLEALEAELD 641
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1206 SHTKLQEEIPVLHEEQELLPNVKEVSET-QETMNELELLteqstTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERD 1284
Cdd:COG4913 642 ALQERREALQRLAEYSWDEIDVASAEREiAELEAELERL-----DASSDDLAALEEQLEELEAELEELEEELDELKGEIG 716
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1285 NLKTIKEALEVKHDQLK------------------------EHIRETLAKIQESQSKQEQSLNmKEKDNETTKIVSEMEQ 1340
Cdd:COG4913 717 RLEKELEQAEEELDELQdrleaaedlarlelralleerfaaALGDAVERELRENLEERIDALR-ARLNRAEEELERAMRA 795
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462594594 1341 FK---PKDSALLRIEIEMLG----LSKRLQESH-----DEMKSVAKE--KDDLQRLQEVLQSESDQLKENIKEI 1400
Cdd:COG4913 796 FNrewPAETADLDADLESLPeylaLLDRLEEDGlpeyeERFKELLNEnsIEFVADLLSKLRRAIREIKERIDPL 869
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1715-1977 |
3.21e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 49.65 E-value: 3.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1715 LKEQQETIDKLRGIVSEKTDK-LSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNET----QKKVSEMEQLKKQIK 1789
Cdd:PRK02224 182 LSDQRGSLDQLKAQIEEKEEKdLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVleehEERREELETLEAEIE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1790 DQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHK 1869
Cdd:PRK02224 262 DLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHN 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1870 ETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEAQNLSMQSVR 1949
Cdd:PRK02224 342 EEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREER 421
|
250 260
....*....|....*....|....*...
gi 2462594594 1950 MDNFQLTKKLHESLEEIRIVAKERDELR 1977
Cdd:PRK02224 422 DELREREAELEATLRTARERVEEAEALL 449
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
863-1065 |
3.22e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 3.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 863 ALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEkddLKQLQESLQ 942
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKE---IAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 943 IERDQLK---------------------SDIHDTVNMNIDTQ---EQLRNALESLKQHQETINTLKSKISEEVSRNLHME 998
Cdd:COG4942 101 AQKEELAellralyrlgrqpplalllspEDFLDAVRRLQYLKylaPARREQAEELRADLAELAALRAELEAERAELEALL 180
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462594594 999 ENTGETKDEFQQKTIENQEELRLLGDELKKQQEIVAQEKnhaiKKEGELSRTCDRLAEVEEKLKEKS 1065
Cdd:COG4942 181 AELEEERAALEALKAERQKLLARLEKELAELAAELAELQ----QEAEELEALIARLEAEAAAAAERT 243
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1371-1543 |
3.30e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 47.61 E-value: 3.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1371 SVAKEKDDLQRLQEvLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAIN 1450
Cdd:COG1579 1 AMPEDLRALLDLQE-LDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1451 DKLQ----NKIQEIYEKEEQFNIKQISEVQEkvnELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQimiKEKEE 1526
Cdd:COG1579 80 EQLGnvrnNKEYEALQKEIESLKRRISDLED---EILELMERIEELEEELAELEAELAELEAELEEKKAELD---EELAE 153
|
170
....*....|....*..
gi 2462594594 1527 MKRVQEALQIERDQLKE 1543
Cdd:COG1579 154 LEAELEELEAEREELAA 170
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
962-1320 |
3.71e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 49.35 E-value: 3.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 962 TQEQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQK-TIENQEELRllGDELKKQQEIVAQEKNHA 1040
Cdd:pfam17380 266 TENEFLNQLLHIVQHQKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRrKLEEAEKAR--QAEMDRQAAIYAEQERMA 343
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1041 IKKEGELSRTcdrlaEVEEKLKEKSQQLqekqqqllnvQEEMSEMQKKINEIENLKNELKNKELTLEhmetERLELAQKL 1120
Cdd:pfam17380 344 MERERELERI-----RQEERKRELERIR----------QEEIAMEISRMRELERLQMERQQKNERVR----QELEAARKV 404
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1121 NENYEEVKSITKERKVLKELQKSFETErdhlrgyIREIEATGLQTKEELKIAHIHLK--EHQETIDELRRSVSEKTAQII 1198
Cdd:pfam17380 405 KILEEERQRKIQQQKVEMEQIRAEQEE-------ARQREVRRLEEERAREMERVRLEeqERQQQVERLRQQEEERKRKKL 477
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1199 NtQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQES----QE 1274
Cdd:pfam17380 478 E-LEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEErrriQE 556
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 2462594594 1275 EIKSLTKERDNLKTIkealevkhdqlkEHIRETLAKIQESQSKQEQ 1320
Cdd:pfam17380 557 QMRKATEERSRLEAM------------EREREMMRQIVESEKARAE 590
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1746-1972 |
3.97e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.61 E-value: 3.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1746 SNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEmeqLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDN 1825
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKA---LLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1826 LRRVEETLKLERDQLKESLQETKARD-----LEIQQELKTARMLS--KEHKETVDKLREKISEKTIQISDIQKDLDKSKD 1898
Cdd:COG4942 95 LRAELEAQKEELAELLRALYRLGRQPplallLSPEDFLDAVRRLQylKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462594594 1899 ELQKKIQELQKKELQLLRVKEDvnmshkKINEMEQLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIRIVAKE 1972
Cdd:COG4942 175 ELEALLAELEEERAALEALKAE------RQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1601-2518 |
4.19e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 49.27 E-value: 4.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1601 RLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQL-KENLRETITRDLEKQEELKIvhMHLKEHQETIDKLRGIVSEK 1679
Cdd:TIGR00606 190 TLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQItSKEAQLESSREIVKSYENEL--DPLKNRLKEIEHNLSKIMKL 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1680 TNEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKlrgIVSEKTDKLSNMQKDLENSNAKLQEKIQE--- 1756
Cdd:TIGR00606 268 DNEIKALKSRKKQMEKDNSELELKMEKVFQGTDEQLNDLYHNHQR---TVREKERELVDCQRELEKLNKERRLLNQEkte 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1757 ---------LKANEHQLITLKKDV----NETQKKVSEMEQ---LKKQIKD-QSLTLSKLEIENLNLAQKLHENLEEMKSV 1819
Cdd:TIGR00606 345 llveqgrlqLQADRHQEHIRARDSliqsLATRLELDGFERgpfSERQIKNfHTLVIERQEDEAKTAAQLCADLQSKERLK 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1820 MKERDNLRrveetlkLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQK-DLDKSKD 1898
Cdd:TIGR00606 425 QEQADEIR-------DEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERELSKaEKNSLTE 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1899 ELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEA----QNLSMQSVRMDNFQLTKKLHESLEEIRIVAKERD 1974
Cdd:TIGR00606 498 TLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMltkdKMDKDEQIRKIKSRHSDELTSLLGYFPNKKQLED 577
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1975 ELRRIKESLKMERDQFIATLREMIARDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKrysemddhyecLNRLSL 2054
Cdd:TIGR00606 578 WLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEESD-----------LERLKE 646
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2055 DLEKEiefQKELSMRVKANlslpYLQTKHIEKLFTANQRCSMEFHRIMKKLKYVLSYVTKIKEEQHESINKFEM--DFID 2132
Cdd:TIGR00606 647 EIEKS---SKQRAMLAGAT----AVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSteSELK 719
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2133 EVEKQKE-LLIKIQHLQQDCDVPSRELRDLK-LNQNMDLHIEEILKDFSESEfpsikTEFQQVLSNRKEMTQFLEEWLNT 2210
Cdd:TIGR00606 720 KKEKRRDeMLGLAPGRQSIIDLKEKEIPELRnKLQKVNRDIQRLKNDIEEQE-----TLLGTIMPEEESAKVCLTDVTIM 794
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2211 RFDIEKLKNGIQKENDRICQVNNFFNNRIIAIMN-ESTEFEERSATISKEWEQDLKSLKEKNEKLfkNYQTLKTSLASGA 2289
Cdd:TIGR00606 795 ERFQMELKDVERKIAQQAAKLQGSDLDRTVQQVNqEKQEKQHELDTVVSKIELNRKLIQDQQEQI--QHLKSKTNELKSE 872
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2290 QVNPTTQDNKNPHVTSRATQLTTEkIRELENSLHEAKESAMHKESKIIKMQKELEVT----NDIIAKLQAKVHESNKCLE 2365
Cdd:TIGR00606 873 KLQIGTNLQRRQQFEEQLVELSTE-VQSLIREIKDAKEQDSPLETFLEKDQQEKEELisskETSNKKAQDKVNDIKEKVK 951
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2366 KTKETIQVLQDKVALGAKPYKEEIEDLKMKLVKIDLEKMKNAKEFEKEISATKATVEYQKEVIRLLRENLRRSQQAQDTS 2445
Cdd:TIGR00606 952 NIHGYMKDIENKIQDGKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRENELK 1031
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462594594 2446 VISEhtdpqpsnkplTCGGGSGIVQNTKALILKSEHIRLEKEISKLKQQNEQLIKQKNELLSNNQHLSNEVKT 2518
Cdd:TIGR00606 1032 EVEE-----------ELKQHLKEMGQMQVLQMKQEHQKLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELRE 1093
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1255-1411 |
4.22e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 47.61 E-value: 4.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1255 LARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNettkI 1334
Cdd:COG1579 19 LDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKEYEA----L 94
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462594594 1335 VSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKS-VAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEEL 1411
Cdd:COG1579 95 QKEIESLKRRISDLEDEILELMERIEELEEELAELEAeLAELEAELEEKKAELDEELAELEAELEELEAEREELAAKI 172
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1687-2446 |
4.70e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 49.28 E-value: 4.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1687 QKDLEHSNDAL-KAQDlkIQEELRIAHMHLKEQQETIDKLRGIVSEKTD-KLSNMQKDLENSNAKLQEKIQELKANEHQL 1764
Cdd:TIGR02168 178 ERKLERTRENLdRLED--ILNELERQLKSLERQAEKAERYKELKAELRElELALLVLRLEELREELEELQEELKEAEEEL 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1765 ITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKleiENLNLAQKLHEnLEEMKSVMKER-DNLRRVEETLKLERDQLKES 1843
Cdd:TIGR02168 256 EELTAELQELEEKLEELRLEVSELEEEIEELQK---ELYALANEISR-LEQQKQILRERlANLERQLEELEAQLEELESK 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1844 LQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNM 1923
Cdd:TIGR02168 332 LDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLER 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1924 SHKKInemEQLKKQFEAQNLSMQSVRMdnfqltKKLHESLEEIRIVAKE-RDELRRIKESLKMERDQFIATLREMIARDR 2002
Cdd:TIGR02168 412 LEDRR---ERLQQEIEELLKKLEEAEL------KELQAELEELEEELEElQEELERLEEALEELREELEEAEQALDAAER 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2003 QNHQVKPEKRLLSDGQQHLTESLREkcsrIKELLKRYSEMDDHYECLNRLsldlekeIEFQKELSMRVKANL--SLPYLQ 2080
Cdd:TIGR02168 483 ELAQLQARLDSLERLQENLEGFSEG----VKALLKNQSGLSGILGVLSEL-------ISVDEGYEAAIEAALggRLQAVV 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2081 TKHIEKLFTANQrcSMEFHRIMKKLKYVLS-----YVTKIKEEQHESINKFEMDFIDEVEKQKELLIKIQHLqqdcdvps 2155
Cdd:TIGR02168 552 VENLNAAKKAIA--FLKQNELGRVTFLPLDsikgtEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYL-------- 621
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2156 reLRDLKLNQNMDLHIEeILKDFSESEfpSIKTEFQQVLSNRKEMTQFLEEW----LNTRFDIEKLKNGIQKENDRICQV 2231
Cdd:TIGR02168 622 --LGGVLVVDDLDNALE-LAKKLRPGY--RIVTLDGDLVRPGGVITGGSAKTnssiLERRREIEELEEKIEELEEKIAEL 696
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2232 NNffnnRIIAIMNESTEFEERSATISKEWEQDLKSLKEknekLFKNYQTLKTSLASGAQVNPTTQDNKNPHVTSRATQLt 2311
Cdd:TIGR02168 697 EK----ALAELRKELEELEEELEQLRKELEELSRQISA----LRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELE- 767
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2312 tEKIRELENSLHEAKESAMHKESKIIKMQKELEVTNDIIAKLQAKVHESNKCLEKTKETIQVLQDKVALGAKPY---KEE 2388
Cdd:TIGR02168 768 -ERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLedlEEQ 846
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*...
gi 2462594594 2389 IEDLKMKLVKIDLEkMKNAKEFEKEISATKATVEYQKEVIRLLRENLRRSQQAQDTSV 2446
Cdd:TIGR02168 847 IEELSEDIESLAAE-IEELEELIEELESELEALLNERASLEEALALLRSELEELSEEL 903
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1118-1620 |
5.06e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 48.61 E-value: 5.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1118 QKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEAtgLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQI 1197
Cdd:COG4717 64 RKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEE--LEAELEELREELEKLEKLLQLLPLYQELEALEAEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1198 intQDLEKSHTKLQEEIPVLHEEQELLPNVKEvsETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIK 1277
Cdd:COG4717 142 ---AELPERLEELEERLEELRELEEELEELEA--ELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELE 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1278 SLTKERDNLKTIKEALEVKHdqlkehireTLAKIQESQSKQEQSLNmkekdneTTKIVSEMEQFKPKDSALLRIEIEMLG 1357
Cdd:COG4717 217 EAQEELEELEEELEQLENEL---------EAAALEERLKEARLLLL-------IAAALLALLGLGGSLLSLILTIAGVLF 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1358 LSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHccLKEQEETINELRVNLSEKET 1437
Cdd:COG4717 281 LVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEE--LLELLDRIEELQELLREAEE 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1438 EISTIQKQleaindKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEI 1517
Cdd:COG4717 359 LEEELQLE------ELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEE 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1518 QImikekEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEyqflkmtavnetqekmcEIEHLKEQFETQKLNLENIET 1597
Cdd:COG4717 433 EL-----EELEEELEELEEELEELREELAELEAELEQLEEDG-----------------ELAELLQELEELKAELRELAE 490
|
490 500
....*....|....*....|...
gi 2462594594 1598 ENIRLtQILHENLEEMRSVTKER 1620
Cdd:COG4717 491 EWAAL-KLALELLEEAREEYREE 512
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1496-1656 |
5.87e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 47.23 E-value: 5.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1496 LQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQE--KEYQFLKMTAVNETqe 1573
Cdd:COG1579 12 LQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEAriKKYEEQLGNVRNNK-- 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1574 kmcEIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQE 1653
Cdd:COG1579 90 ---EYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAERE 166
|
...
gi 2462594594 1654 ELK 1656
Cdd:COG1579 167 ELA 169
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1610-1862 |
5.88e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 48.76 E-value: 5.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1610 LEEMRSVTKERDDLRSVEETLKVERDQlkenlRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEKtnEISNMQKD 1689
Cdd:COG4913 224 FEAADALVEHFDDLERAHEALEDAREQ-----IELLEPIRELAERYAAARERLAELEYLRAALRLWFAQR--RLELLEAE 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1690 LEHSNDALKAQdlkiQEELRIAHMHLKEQQETIDKLRG-IVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLK 1768
Cdd:COG4913 297 LEELRAELARL----EAELERLEARLDALREELDELEAqIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALG 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1769 KDVNETQKkvsEMEQLKKQIKDQSLTLSkleienlnlaqklhenlEEMKSVMKERDNLRRVEETLKLERDQLKESLQETK 1848
Cdd:COG4913 373 LPLPASAE---EFAALRAEAAALLEALE-----------------EELEALEEALAEAEAALRDLRRELRELEAEIASLE 432
|
250
....*....|....
gi 2462594594 1849 ARDLEIQQELKTAR 1862
Cdd:COG4913 433 RRKSNIPARLLALR 446
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1719-1908 |
6.20e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 48.47 E-value: 6.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1719 QETIDKLRGIVSEKTDKLSNMQK--DLENSNAKLQEKIQELKANEHQLITLKKDVNETQkkvSEMEQLKKQIKDQSLTLS 1796
Cdd:COG3206 181 EEQLPELRKELEEAEAALEEFRQknGLVDLSEEAKLLLQQLSELESQLAEARAELAEAE---ARLAALRAQLGSGPDALP 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1797 klEIENLNLAQKLHENLEEMKSvmKERDNLRRVEE------TLKLERDQLKESLQETKARDL-EIQQELKTARMLSKEHK 1869
Cdd:COG3206 258 --ELLQSPVIQQLRAQLAELEA--ELAELSARYTPnhpdviALRAQIAALRAQLQQEAQRILaSLEAELEALQAREASLQ 333
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 2462594594 1870 ETVDKLREKIS---EKTIQISDIQKDLDKSK---DELQKKIQELQ 1908
Cdd:COG3206 334 AQLAQLEARLAelpELEAELRRLEREVEVARelyESLLQRLEEAR 378
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1360-1561 |
6.77e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.90 E-value: 6.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1360 KRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEI 1439
Cdd:COG3883 23 KELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALYRSGGSV 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1440 STIQ---------------KQLEAINDKLQNKIQEIYEKEEQFNIKQiSEVQEKVNELKQFK----EHRKAKDSALQSIE 1500
Cdd:COG3883 103 SYLDvllgsesfsdfldrlSALSKIADADADLLEELKADKAELEAKK-AELEAKLAELEALKaeleAAKAELEAQQAEQE 181
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462594594 1501 SKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQ 1561
Cdd:COG3883 182 ALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 242
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
915-1459 |
7.63e-05 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 48.37 E-value: 7.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 915 EKLQQTLEEVKTLTQEKDDLKQLQESLQierdqlksdihdtvnmniDTQEQLrnalESLKQHQETINTLKSKISEEvsrn 994
Cdd:PRK11281 39 ADVQAQLDALNKQKLLEAEDKLVQQDLE------------------QTLALL----DKIDRQKEETEQLKQQLAQA---- 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 995 lhmeentgetkdefQQKTIENQEELrllgDELKKQQEIVAQE--KNHAIKK-EGELSRTCDRLAEVEEKLKEKSQQLQEK 1071
Cdd:PRK11281 93 --------------PAKLRQAQAEL----EALKDDNDEETREtlSTLSLRQlESRLAQTLDQLQNAQNDLAEYNSQLVSL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1072 QQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNEnyeevKSITKERKVLK---ELQKSFETER 1148
Cdd:PRK11281 155 QTQPERAQAALYANSQRLQQIRNLLKGGKVGGKALRPSQRVLLQAEQALLN-----AQNDLQRKSLEgntQLQDLLQKQR 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1149 DHLRGYIREIEAtglqtkeelkiahiHLKEHQETIDELRRSVSEKTA-QIINTQDLEKSHTKlqeeiPVLHEEQELlpNV 1227
Cdd:PRK11281 230 DYLTARIQRLEH--------------QLQLLQEAINSKRLTLSEKTVqEAQSQDEAARIQAN-----PLVAQELEI--NL 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1228 KeVSEtqetmnelELLteQSTTkdsttlariemerlRLNEKFQESQEeikslTKER-DNL----KTIKEALEVKHDQLke 1302
Cdd:PRK11281 289 Q-LSQ--------RLL--KATE--------------KLNTLTQQNLR-----VKNWlDRLtqseRNIKEQISVLKGSL-- 336
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1303 hireTLAKIqesQSKQEQSLnmkekdnETTKIVSEMeqfkPKDSALLRIEIemlglsKRLQESHDEMKSVAKEKDDLQRL 1382
Cdd:PRK11281 337 ----LLSRI---LYQQQQAL-------PSADLIEGL----ADRIADLRLEQ------FEINQQRDALFQPDAYIDKLEAG 392
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462594594 1383 QEvlQSESDQLKENIKEIvakhLETEEELkvahcclkeQEETINELRVNLSEKET-EIStiQKQLEAINDKLQNKIQE 1459
Cdd:PRK11281 393 HK--SEVTDEVRDALLQL----LDERREL---------LDQLNKQLNNQLNLAINlQLN--QQQLLSVSDSLQSTLTQ 453
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1423-2276 |
8.11e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.53 E-value: 8.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1423 ETINELRVNLSEKETEISTIQKQLeainDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESK 1502
Cdd:TIGR02169 177 EELEEVEENIERLDLIIDEKRQQL----ERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1503 MLELTNRLQESQEEI------------QIMIKEKEEMKRVQE---ALQIERDQLKENTKEIVAKMKESQEKEYQflkmtA 1567
Cdd:TIGR02169 253 LEKLTEEISELEKRLeeieqlleelnkKIKDLGEEEQLRVKEkigELEAEIASLERSIAEKERELEDAEERLAK-----L 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1568 VNETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITR 1647
Cdd:TIGR02169 328 EAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRE 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1648 DLEKQEELKIVHMHLKEHQETIDKLRGivsektnEISNMQKDLEHSNDALKAQDLKIQeelRIAHMHLKEQQEtIDKLRG 1727
Cdd:TIGR02169 408 LDRLQEELQRLSEELADLNAAIAGIEA-------KINELEEEKEDKALEIKKQEWKLE---QLAADLSKYEQE-LYDLKE 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1728 IVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQ-----SLTLSKLEIEN 1802
Cdd:TIGR02169 477 EYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAievaaGNRLNNVVVED 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1803 LNLAQKLHENLEEMKS-------VMKERDNLRRVEETLK----------LERDQLKESLQETKARDLEIQQELKTARML- 1864
Cdd:TIGR02169 557 DAVAKEAIELLKRRKAgratflpLNKMRDERRDLSILSEdgvigfavdlVEFDPKYEPAFKYVFGDTLVVEDIEAARRLm 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1865 -----------------------SKEHKETVDKLREKisEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDV 1921
Cdd:TIGR02169 637 gkyrmvtlegelfeksgamtggsRAPRGGILFSRSEP--AELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDA 714
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1922 NMSHKKI-NEMEQLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIRIVAKERDELRRIKESLKMERDqfiatlremiar 2000
Cdd:TIGR02169 715 SRKIGEIeKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALN------------ 782
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2001 drqnhqvKPEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMDDHyecLNRLSLD---LEKEIEFQKELSMRVKAnlslp 2077
Cdd:TIGR02169 783 -------DLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQK---LNRLTLEkeyLEKEIQELQEQRIDLKE----- 847
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2078 ylQTKHIEKLFTANQRCSMEFHRIMKKLKYVLSYVtkikEEQHESINKFemdfIDEVEKQ-KELLIKIQHLQQDCDvpsr 2156
Cdd:TIGR02169 848 --QIKSIEKEIENLNGKKEELEEELEELEAALRDL----ESRLGDLKKE----RDELEAQlRELERKIEELEAQIE---- 913
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2157 elrDLKLNQNMDLHIEEILKDfsesefpsiktEFQQVLSNRKEMTQFLEEWLntrfDIEKLKNGIQKENDRICQVNNFfN 2236
Cdd:TIGR02169 914 ---KKRKRLSELKAKLEALEE-----------ELSEIEDPKGEDEEIPEEEL----SLEDVQAELQRVEEEIRALEPV-N 974
|
890 900 910 920
....*....|....*....|....*....|....*....|
gi 2462594594 2237 NRIIaimnesTEFEERsatiskewEQDLKSLKEKNEKLFK 2276
Cdd:TIGR02169 975 MLAI------QEYEEV--------LKRLDELKEKRAKLEE 1000
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
543-802 |
8.70e-05 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 48.00 E-value: 8.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 543 KTKKDQEMQLIHEIsnlkNLVkHAEVYNQDLENE-----------LSSKVELLR---EKEDQIKKLQEYIDSQKLENIKM 608
Cdd:PRK05771 15 KSYKDEVLEALHEL----GVV-HIEDLKEELSNErlrklrslltkLSEALDKLRsylPKLNPLREEKKKVSVKSLEELIK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 609 DLSYSLESIEDpkqmkqtlfdaetvaldakresaflrsenlELKEKMKELattyKQMENDIQLYQSQLEAKKKMQ---VD 685
Cdd:PRK05771 90 DVEEELEKIEK------------------------------EIKELEEEI----SELENEIKELEQEIERLEPWGnfdLD 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 686 LEKELQSafneitKLTSLIDGKVPKDLLCNLELEGKIT--------------------DLQKELNKEVEENEALREEV-- 743
Cdd:PRK05771 136 LSLLLGF------KYVSVFVGTVPEDKLEELKLESDVEnveyistdkgyvyvvvvvlkELSDEVEEELKKLGFERLELee 209
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462594594 744 ---------ILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESrvqgLLEEIGKTK 802
Cdd:PRK05771 210 egtpselirEIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIELERAE----ALSKFLKTD 273
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
1372-2002 |
8.85e-05 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 48.21 E-value: 8.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1372 VAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEeLKVAHCCLKEQEETineLRVNLSEKETeistIQKQLEAIND 1451
Cdd:pfam07111 68 ISRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELDA-LAVAEKAGQAEAEG---LRAALAGAEM----VRKNLEEGSQ 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1452 KLQNKIQEIYEKEeqfnIKQISEVQEKVneLKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQ 1531
Cdd:pfam07111 140 RELEEIQRLHQEQ----LSSLTQAHEEA--LSSLTSKAEGLEKSLNSLETKRAGEAKQLAEAQKEAELLRKQLSKTQEEL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1532 EALQIERDQLKENTKEIVAKMKESQEKEYqflkmtavnETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHENLE 1611
Cdd:pfam07111 214 EAQVTLVESLRKYVGEQVPPEVHSQTWEL---------ERQELLDTMQHLQEDRADLQATVELLQVRVQSLTHMLALQEE 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1612 EMRSVTKERDDL-----RSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETidklrgiVSEKTNEISNM 1686
Cdd:pfam07111 285 ELTRKIQPSDSLepefpKKCRSLLNRWREKVFALMVQLKAQDLEHRDSVKQLRGQVAELQEQ-------VTSQSQEQAIL 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1687 QKDLEHSNDALKAQDLKI---QEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQ 1763
Cdd:pfam07111 358 QRALQDKAAEVEVERMSAkglQMELSRAQEARRRQQQQTASAEEQLKFVVNAMSSTQIWLETTMTRVEQAVARIPSLSNR 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1764 LITLKKDVNETQ----KKVSeMEQLKKQ-----------IKDQSLTLSKLEIENLNLAQKLHENLEEMKS-VMKERDNLR 1827
Cdd:pfam07111 438 LSYAVRKVHTIKglmaRKVA-LAQLRQEscpppppappvDADLSLELEQLREERNRLDAELQLSAHLIQQeVGRAREQGE 516
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1828 RVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTiqisdiqkdlDKSKDELQKKIQEL 1907
Cdd:pfam07111 517 AERQQLSEVAQQLEQELQRAQESLASVGQQLEVARQGQQESTEEAASLRQELTQQQ----------EIYGQALQEKVAEV 586
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1908 QKkelqllRVKEDVNMSHKKINEMEQlkkqfeAQNLSMQSVRMDNFQLTKKlhesleeirivaKERD-ELRRIKESLKME 1986
Cdd:pfam07111 587 ET------RLREQLSDTKRRLNEARR------EQAKAVVSLRQIQHRATQE------------KERNqELRRLQDEARKE 642
|
650
....*....|....*.
gi 2462594594 1987 RDQFIATLREMIARDR 2002
Cdd:pfam07111 643 EGQRLARRVQELERDK 658
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
737-1093 |
1.15e-04 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 47.58 E-value: 1.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 737 EALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKdklfsevvhkESRVQGLLEEIGKTKDDlattqsnykstd 816
Cdd:pfam07888 38 ECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRREL----------ESRVAELKEELRQSREK------------ 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 817 qefqnfktlHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKtelsyktQELQEKTREVQERLNEMEQLKEQL 896
Cdd:pfam07888 96 ---------HEELEEKYKELSASSEELSEEKDALLAQRAAHEARIRELE-------EDIKTLTQRVLERETELERMKERA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 897 ENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDI----------HDTVNMNIDTQEQL 966
Cdd:pfam07888 160 KKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTIttltqklttaHRKEAENEALLEEL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 967 RNALESLKQHQETINTLKSKISEEVSR-------------------------NLHMEENTGETKDE---FQQKTIENQEE 1018
Cdd:pfam07888 240 RSLQERLNASERKVEGLGEELSSMAAQrdrtqaelhqarlqaaqltlqladaSLALREGRARWAQEretLQQSAEADKDR 319
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462594594 1019 LRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCD----RLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIE 1093
Cdd:pfam07888 320 IEKLSAELQRLEERLQEERMEREKLEVELGREKDcnrvQLSESRRELQELKASLRVAQKEKEQLQAEKQELLEYIRQLE 398
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
518-1422 |
1.45e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 47.73 E-value: 1.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 518 RTEKEEMELKLKEKNDLDEFEALERKTKKDQEMQLIHEISNLKNLVKHAEVYNQDLENELSSK-VELLREKEDQIKKLQE 596
Cdd:TIGR00606 229 KEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKmEKVFQGTDEQLNDLYH 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 597 YIDS--QKLENIKMDLSYSLESIEDPKQM---KQTLFDAE--TVALDAKRESAFLRSENLELKEKMKEL--------ATT 661
Cdd:TIGR00606 309 NHQRtvREKERELVDCQRELEKLNKERRLlnqEKTELLVEqgRLQLQADRHQEHIRARDSLIQSLATRLeldgfergPFS 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 662 YKQMENDIQLYQSQLEAKKKMQVDLEKELQSafNEITKLTSLIDGKVPKDLLcnleleGKITDLQKE-LNKEVEENEALR 740
Cdd:TIGR00606 389 ERQIKNFHTLVIERQEDEAKTAAQLCADLQS--KERLKQEQADEIRDEKKGL------GRTIELKKEiLEKKQEELKFVI 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 741 eevillSELKSLPSEVER-LRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEF 819
Cdd:TIGR00606 461 ------KELQQLEGSSDRiLELDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTR 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 820 QNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAqKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENR 899
Cdd:TIGR00606 535 TQMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGYF-PNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNE 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 900 dstlqtvEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKsdihdtvnmnidtqeQLRNALESLKQHQET 979
Cdd:TIGR00606 614 -------LESKEEQLSSYEDKLFDVCGSQDEESDLERLKEEIEKSSKQRA---------------MLAGATAVYSQFITQ 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 980 INTLKSKISEEVSRNLHMEENTGETKDEFQQKTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEE 1059
Cdd:TIGR00606 672 LTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRN 751
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1060 KLKEKSqqlqEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVlKE 1139
Cdd:TIGR00606 752 KLQKVN----RDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGSDLDRTV-QQ 826
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1140 LQKSFETERDHLRGYIREIEATGLQTKEELKIAHiHLKEHQETIDELRRSVSEKTAQiinTQDLEKSHTKLQEEIPVLhe 1219
Cdd:TIGR00606 827 VNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQ-HLKSKTNELKSEKLQIGTNLQR---RQQFEEQLVELSTEVQSL-- 900
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1220 eqellpnVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNL-KTIKEALEVKHD 1298
Cdd:TIGR00606 901 -------IREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIeNKIQDGKDDYLK 973
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1299 QLKEHIRETLAKIQESQSKQeqslnmkEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDD 1378
Cdd:TIGR00606 974 QKETELNTVNAQLEECEKHQ-------EKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRENELKEVEEELKQHLKEMGQ 1046
|
890 900 910 920
....*....|....*....|....*....|....*....|....*....
gi 2462594594 1379 LQRLQ-----EVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQE 1422
Cdd:TIGR00606 1047 MQVLQmkqehQKLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELREPQ 1095
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
859-1050 |
1.67e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 46.75 E-value: 1.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 859 SSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEkddLKQLQ 938
Cdd:COG3883 2 LALALAAPTPAFADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAE---IAEAE 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 939 ESLQIERDQLK----------------------SDIHDTVNmNIDTQEQL----RNALESLKQHQETINTLKSKISEEVS 992
Cdd:COG3883 79 AEIEERREELGeraralyrsggsvsyldvllgsESFSDFLD-RLSALSKIadadADLLEELKADKAELEAKKAELEAKLA 157
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 2462594594 993 RNLHMEENTGETKDEFQQKTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRT 1050
Cdd:COG3883 158 ELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAA 215
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
1715-2169 |
1.80e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 47.38 E-value: 1.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1715 LKEQQETIDKLRGIV----SEKTDKLSNMQKDLENSNAKLQEKiQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKD 1790
Cdd:COG5022 832 LRETEEVEFSLKAEVliqkFGRSLKAKKRFSLLKKETIYLQSA-QRVELAERQLQELKIDVKSISSLKLVNLELESEIIE 910
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1791 QSLTLSKLEIENLNLaqkLHENLEEMKSVMKERDNlrRVEETLKLERDQLKESLQETKARdleIQQELKTARMLSKEHKE 1870
Cdd:COG5022 911 LKKSLSSDLIENLEF---KTELIARLKKLLNNIDL--EEGPSIEYVKLPELNKLHEVESK---LKETSEEYEDLLKKSTI 982
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1871 TVDKLREKISEKTIQISDIQKdLDKSKDELQKKIQELQKKELQLLRVKEDvnmSHKKINEMEQLKKQFEAQNLSmqsvrm 1950
Cdd:COG5022 983 LVREGNKANSELKNFKKELAE-LSKQYGALQESTKQLKELPVEVAELQSA---SKIISSESTELSILKPLQKLK------ 1052
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1951 dnFQLTKKLHESLEEIRIVAKERDELRRIKESLKMERDQFIaTLREMiardrqnhqvkPEKRLLSDGQQHLteSLREKCS 2030
Cdd:COG5022 1053 --GLLLLENNQLQARYKALKLRRENSLLDDKQLYQLESTEN-LLKTI-----------NVKDLEVTNRNLV--KPANVLQ 1116
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2031 RIKELLKRYSEMDDHYECLNRLSLDLEKEIEFQKELSMRVKANLSLPYLQTKHIEKLFtANQRCSMEFHRIMKKLKYVLS 2110
Cdd:COG5022 1117 FIVAQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEANLEALPSPPPF-AALSEKRLYQSALYDEKSKLS 1195
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462594594 2111 yvtkikeeqHESINKFEMDFIDEVEKQKELL---IKIQHLQQDCDVPSRELRDLKLNQNMDL 2169
Cdd:COG5022 1196 ---------SSEVNDLKNELIALFSKIFSGWprgDKLKKLISEGWVPTEYSTSLKGFNNLNK 1248
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
721-931 |
2.05e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.30 E-value: 2.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 721 KITDLQKELNKEVEENEALREEVI-LLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIG 799
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAaLKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 800 KTKDDLAT-TQSNYKSTDQEFQNFKTLHMDFEQKYKM------VLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKT 872
Cdd:COG4942 101 AQKEELAElLRALYRLGRQPPLALLLSPEDFLDAVRRlqylkyLAPARREQAEELRADLAELAALRAELEAERAELEALL 180
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2462594594 873 QELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEK 931
Cdd:COG4942 181 AELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
515-743 |
2.43e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.91 E-value: 2.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 515 EQLRTEKEEMELKLKEKNDldefealERKTKKDQEMQLIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKL 594
Cdd:COG4942 23 AEAEAELEQLQQEIAELEK-------ELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 595 QEYIDSQKLENIKMDLSYSLESIEDPKQMkqtLFDAETvALDAKRESAFLRSENLELKEKMKELATTYKQME---NDIQL 671
Cdd:COG4942 96 RAELEAQKEELAELLRALYRLGRQPPLAL---LLSPED-FLDAVRRLQYLKYLAPARREQAEELRADLAELAalrAELEA 171
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462594594 672 YQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEV 743
Cdd:COG4942 172 ERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
495-1026 |
2.71e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.45 E-value: 2.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 495 NIESELNSLRADYDNLVLDYEQLRTEKEEMEL----------KLKEKNDLDEFEALERKTKKDQEMQLIHEISNLKNLVK 564
Cdd:COG4913 222 DTFEAADALVEHFDDLERAHEALEDAREQIELlepirelaerYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 565 HAEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSQKLENIKMDLSySLESIEDPKQMKQTLFDAETVALDAKRESAfl 644
Cdd:COG4913 302 AELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIE-RLERELEERERRRARLEALLAALGLPLPAS-- 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 645 RSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKmqvDLEKELQSAFNEITKLT---SLIDGKVP--KDLLCNlELE 719
Cdd:COG4913 379 AEEFAALRAEAAALLEALEEELEALEEALAEAEAALR---DLRRELRELEAEIASLErrkSNIPARLLalRDALAE-ALG 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 720 GKITDLQ--KELnKEVEENEALREEVI----------LLSELKSLP---SEVERLRKE-------IQDKSEELHIITSEK 777
Cdd:COG4913 455 LDEAELPfvGEL-IEVRPEEERWRGAIervlggfaltLLVPPEHYAaalRWVNRLHLRgrlvyerVRTGLPDPERPRLDP 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 778 DKLFSEVVHKESRVQGLLE-EIGKTKDDLATTqsnyksTDQEFQNF-------------KTLH-MDFEQKYKMVL---EE 839
Cdd:COG4913 534 DSLAGKLDFKPHPFRAWLEaELGRRFDYVCVD------SPEELRRHpraitragqvkgnGTRHeKDDRRRIRSRYvlgFD 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 840 NERmnqEIVNLSKEAQKFDSSLGALKTELsyktQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVER----EKTLitE 915
Cdd:COG4913 608 NRA---KLAALEAELAELEEELAEAEERL----EALEAELDALQERREALQRLAEYSWDEIDVASAEREiaelEAEL--E 678
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 916 KLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIhdtvnmnIDTQEQLRNALESLKQHQETINTLKSKIS------- 988
Cdd:COG4913 679 RLDASSDDLAALEEQLEELEAELEELEEELDELKGEI-------GRLEKELEQAEEELDELQDRLEAAEDLARlelrall 751
|
570 580 590
....*....|....*....|....*....|....*...
gi 2462594594 989 EEVSRNLHMEENTGETKDEFQQKTIENQEELRLLGDEL 1026
Cdd:COG4913 752 EERFAAALGDAVERELRENLEERIDALRARLNRAEEEL 789
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
514-949 |
2.71e-04 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 46.27 E-value: 2.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 514 YEQLRTEKEEMELKLK------EKNDLDEFEALERKTKKDQEMQ----LIHEISNLKNLVKHAEV-YNQDLENELSSKVE 582
Cdd:pfam05557 11 LSQLQNEKKQMELEHKrarielEKKASALKRQLDRESDRNQELQkrirLLEKREAEAEEALREQAeLNRLKKKYLEALNK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 583 LLREKEDQIKKLQEYIDS---------QKLENIKMDLSYSLESIEDPKQMKQTlfdaetvaLDAKRESAFLRSENLELKE 653
Cdd:pfam05557 91 KLNEKESQLADAREVISClknelselrRQIQRAELELQSTNSELEELQERLDL--------LKAKASEAEQLRQNLEKQQ 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 654 K-MKELATTYKQMENDIQLYQSQLEAKKKMQV------DLEKELQSAFNEITKLTSLIDGkvpkdllcNLELEGKITDLQ 726
Cdd:pfam05557 163 SsLAEAEQRIKELEFEIQSQEQDSEIVKNSKSelaripELEKELERLREHNKHLNENIEN--------KLLLKEEVEDLK 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 727 KELNKEveenEALREEVILLS-ELKSLPSEVERLRKEIQDKSEELhiitSEKDKLFSEVVHKESRVQGLLEEIGKTKDDL 805
Cdd:pfam05557 235 RKLERE----EKYREEAATLElEKEKLEQELQSWVKLAQDTGLNL----RSPEDLSRRIEQLQQREIVLKEENSSLTSSA 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 806 ATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKE-------AQKFDSSLGALKT--ELSYKTQELQ 876
Cdd:pfam05557 307 RQLEKARRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRRVLLLTKErdgyraiLESYDKELTMSNYspQLLERIEEAE 386
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462594594 877 EKTREVQERLNEME----QLKEQLENRDSTLQTVEREKTLIteKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLK 949
Cdd:pfam05557 387 DMTQKMQAHNEEMEaqlsVAEEELGGYKQQAQTLERELQAL--RQQESLADPSYSKEEVDSLRRKLETLELERQRLR 461
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1427-2207 |
2.77e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 46.50 E-value: 2.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1427 ELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFN--IKQISEVQEKVNELKQFKEHRKAKDSALQSIESKML 1504
Cdd:TIGR00618 184 MEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEkeLKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLK 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1505 ELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQlkentkEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQ 1584
Cdd:TIGR00618 264 QLRARIEELRAQEAVLEETQERINRARKAAPLAAHI------KAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQ 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1585 FETQklnlenietENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKEnLRETITRDLEKQEELKIVHMHLKE 1664
Cdd:TIGR00618 338 SSIE---------EQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHT-LQQQKTTLTQKLQSLCKELDILQR 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1665 HQETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRgivsEKTDKLSNMQKDLE 1744
Cdd:TIGR00618 408 EQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLK----EREQQLQTKEQIHL 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1745 NSNAKLQE---KIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMK 1821
Cdd:TIGR00618 484 QETRKKAVvlaRLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKE 563
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1822 ERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKtarMLSKEHKETVDKLREKISEKTIQISDIQKDLdkskdELQ 1901
Cdd:TIGR00618 564 QMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTE---KLSEAEDMLACEQHALLRKLQPEQDLQDVRL-----HLQ 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1902 KKIQELQKKELQLLRvkEDVNMSHKKINEMEQLKKQFEAQNLSmqsvrmdnfQLTKKLHESLEEIRIVAKERDELRRIKE 1981
Cdd:TIGR00618 636 QCSQELALKLTALHA--LQLTLTQERVREHALSIRVLPKELLA---------SRQLALQKMQSEKEQLTYWKEMLAQCQT 704
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1982 SLKMERDQFIATLREM----IARDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMDDHYECLNRLSLDLE 2057
Cdd:TIGR00618 705 LLRELETHIEEYDREFneieNASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLA 784
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2058 KEIEFQKELsmRVKANLSLPYLQTKHIEKLFTANQrcsmefhrimkklkyvlsyvtkIKEEQHESINKFEMDFIDEVEKQ 2137
Cdd:TIGR00618 785 AEIQFFNRL--REEDTHLLKTLEAEIGQEIPSDED----------------------ILNLQCETLVQEEEQFLSRLEEK 840
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 2138 KELLIKIQHLQqdcdvpsrelrdlklnqnmdLHIEEILKdfsesefpsiktEFQQVLSNRKEMTQFLEEW 2207
Cdd:TIGR00618 841 SATLGEITHQL--------------------LKYEECSK------------QLAQLTQEQAKIIQLSDKL 878
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1362-1526 |
2.80e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 46.31 E-value: 2.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1362 LQESHDEMKSVAKEKddlqrLQEVlQSESDQLKEnikeivakhlETEEELKVAHCCLKEQEETINELRVNLSEKETEIST 1441
Cdd:PRK12704 44 LEEAKKEAEAIKKEA-----LLEA-KEEIHKLRN----------EFEKELRERRNELQKLEKRLLQKEENLDRKLELLEK 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1442 IQKQLEAINDKLQNKIQEIYEKEEqfnikqisEVQEKVNELKQFKEHRkakdSALQSIESKMLELTNRLQESQEEIQIMI 1521
Cdd:PRK12704 108 REEELEKKEKELEQKQQELEKKEE--------ELEELIEEQLQELERI----SGLTAEEAKEILLEKVEEEARHEAAVLI 175
|
....*
gi 2462594594 1522 KEKEE 1526
Cdd:PRK12704 176 KEIEE 180
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
837-1608 |
2.81e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 46.25 E-value: 2.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 837 LEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEK 916
Cdd:pfam05483 70 FENSEGLSRLYSKLYKEAEKIKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 917 LQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSdIHDTVNMNIdtqEQLRNALESLKQHQETIN-TLKSKISEEVSRNL 995
Cdd:pfam05483 150 NNATRHLCNLLKETCARSAEKTKKYEYEREETRQ-VYMDLNNNI---EKMILAFEELRVQAENARlEMHFKLKEDHEKIQ 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 996 HMEEntgETKDEFQQKtiENQEELRLLGdelkkqqeiVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQqlqekqqql 1075
Cdd:pfam05483 226 HLEE---EYKKEINDK--EKQVSLLLIQ---------ITEKENKMKDLTFLLEESRDKANQLEEKTKLQDE--------- 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1076 lNVQEEMSEMQKKINEIENLKNELKNKELTLEHMEtERLELAQKLNENYEEVKSITKERKVLKELQKSFeterdhlrgYI 1155
Cdd:pfam05483 283 -NLKELIEKKDHLTKELEDIKMSLQRSMSTQKALE-EDLQIATKTICQLTEEKEAQMEELNKAKAAHSF---------VV 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1156 REIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLEKS-HTKLQEEIPVLHEEQELLPNVKEVSETQ 1234
Cdd:pfam05483 352 TEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNkEVELEELKKILAEDEKLLDEKKQFEKIA 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1235 ETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQL----KEHIRETLAK 1310
Cdd:pfam05483 432 EELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLllenKELTQEASDM 511
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1311 IQESQSKQEQSLNMKEKDNETTKIVSEMEQFKPK---DSALLRIEIEMLG--LSKRLQESHDEMKSVAKEKDDLQRLQEV 1385
Cdd:pfam05483 512 TLELKKHQEDIINCKKQEERMLKQIENLEEKEMNlrdELESVREEFIQKGdeVKCKLDKSEENARSIEYEVLKKEKQMKI 591
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1386 LQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEiyekee 1465
Cdd:pfam05483 592 LENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIED------ 665
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1466 qfnikqisevqEKVNELKQFKEHRKAKDSALQSIESKMlELTNRLQES-QEEIQIMIKEKEEMKRVQEalqiERDQlken 1544
Cdd:pfam05483 666 -----------KKISEEKLLEEVEKAKAIADEAVKLQK-EIDKRCQHKiAEMVALMEKHKHQYDKIIE----ERDS---- 725
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462594594 1545 tkeiVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHE 1608
Cdd:pfam05483 726 ----ELGLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAKENTAILKD 785
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
895-1143 |
3.25e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.59 E-value: 3.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 895 QLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIhDTVNMNIDT-QEQLRNALESL 973
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEI-AEAEAEIEErREELGERARAL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 974 KQHQETINT----LKSK-ISEEVSRNLHMEENTgetkdEFQQKTIENQEELRllgDELKKQQEIVAQEKnhaikkegels 1048
Cdd:COG3883 96 YRSGGSVSYldvlLGSEsFSDFLDRLSALSKIA-----DADADLLEELKADK---AELEAKKAELEAKL----------- 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1049 rtcdrlAEVEEKLKEksqqlqekqqqllnVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVK 1128
Cdd:COG3883 157 ------AELEALKAE--------------LEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAA 216
|
250
....*....|....*
gi 2462594594 1129 SITKERKVLKELQKS 1143
Cdd:COG3883 217 AAAAAAAAAAAAAAA 231
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1210-1562 |
3.28e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 46.27 E-value: 3.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1210 LQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIE-MERLRLNEKFQESQEEIKSLTKERDNLKT 1288
Cdd:pfam17380 245 LAEDVTTMTPEYTVRYNGQTMTENEFLNQLLHIVQHQKAVSERQQQEKFEkMEQERLRQEKEEKAREVERRRKLEEAEKA 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1289 IKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKpkdsALLRIEIEMLGLSKRLQESHDE 1368
Cdd:pfam17380 325 RQAEMDRQAAIYAEQERMAMERERELERIRQEERKRELERIRQEEIAMEISRMR----ELERLQMERQQKNERVRQELEA 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1369 MKSVAKEKDDLQRLQEVLQSESDQLK---ENIKEIVAKHLETEEElkvahcclKEQEetinelRVNLSEKETeistiQKQ 1445
Cdd:pfam17380 401 ARKVKILEEERQRKIQQQKVEMEQIRaeqEEARQREVRRLEEERA--------REME------RVRLEEQER-----QQQ 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1446 LEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKA---KDSALQSIESKMLELTNRLQESQ-----EEI 1517
Cdd:pfam17380 462 VERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAmieEERKRKLLEKEMEERQKAIYEEErrreaEEE 541
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1518 QIMIKEKEEMKRVQEALQI---ERDQLK--ENTKEIVAKMKESQEKEYQF 1562
Cdd:pfam17380 542 RRKQQEMEERRRIQEQMRKateERSRLEamEREREMMRQIVESEKARAEY 591
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
348-1119 |
3.77e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 46.12 E-value: 3.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 348 YRKEIMDLKKQLEEVSLETRAQAMEKDQLAQLLEEKDLLQKVQNEKIENLTRM--LVTSSSLTLQQELKAKRKRRVTWCL 425
Cdd:pfam02463 234 LNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEelKLLAKEEEELKSELLKLERRKVDDE 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 426 GKINKMKNSNYADQFNIPTNITTKTHKLSINLLREIDESVCSESDVFSNTLDTLSEIEWNpATKLLNQENIESELNSLRA 505
Cdd:pfam02463 314 EKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEE-ELLAKKKLESERLSSAAKL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 506 DYDNLVLDYEQLRTEKEEMELKLKEKNDL-DEFEALERKTKKDQEMQLIHEISNLKNLVKHAEVYNQDLENELSSKVELL 584
Cdd:pfam02463 393 KEEELELKSEEEKEAQLLLELARQLEDLLkEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSED 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 585 REKEDQIKKLQEYIDSQKLENIKMDLSYSLESIEDPKQMKQTLF-DAETVALDAKRESAFLRSENLELKEKMKELATTYK 663
Cdd:pfam02463 473 LLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIkDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVE 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 664 QMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEV 743
Cdd:pfam02463 553 VSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDT 632
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 744 IllsELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFK 823
Cdd:pfam02463 633 E---LTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREK 709
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 824 tlhmdfEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTL 903
Cdd:pfam02463 710 ------EELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKT 783
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 904 QTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLR-------NALESLKQH 976
Cdd:pfam02463 784 EKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKleklaeeELERLEEEI 863
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 977 QETINTLKSKISEEVSRNLHMEENTGETKDEFQQKTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELS-RTCDRLA 1055
Cdd:pfam02463 864 TKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEePEELLLE 943
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462594594 1056 EVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENlkNELKNKELTLEHMETERLELAQK 1119
Cdd:pfam02463 944 EADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEE--FEEKEERYNKDELEKERLEEEKK 1005
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1749-1943 |
3.89e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.91 E-value: 3.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1749 KLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDqsltlsklEIENLNLAQKLHENLEEMKSvmkerdnlrr 1828
Cdd:COG4717 75 ELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELRE--------ELEKLEKLLQLLPLYQELEA---------- 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1829 veetLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQ 1908
Cdd:COG4717 137 ----LEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELE 212
|
170 180 190
....*....|....*....|....*....|....*
gi 2462594594 1909 KKELQLLRVKEDVNmshkkiNEMEQLKKQFEAQNL 1943
Cdd:COG4717 213 EELEEAQEELEELE------EELEQLENELEAAAL 241
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
515-954 |
4.53e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.53 E-value: 4.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 515 EQLRTEKEEMELKLKEKNDLDEFEAlERKTKKDQEMQLIHEISNLKNLVKHAEVYN--QDLENELSSKVELLREKEDQIK 592
Cdd:COG4717 78 EELKEAEEKEEEYAELQEELEELEE-ELEELEAELEELREELEKLEKLLQLLPLYQelEALEAELAELPERLEELEERLE 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 593 KLQEYIdsQKLENIKMDLSYSLESIEDpkQMKQTLFDAETVALDAKRESAFLRSENLELKEKMKELATTYKQMENDIQLY 672
Cdd:COG4717 157 ELRELE--EELEELEAELAELQEELEE--LLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 673 QSQLEAKKkmqvdLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELE---------GKITDLQKELNKEVEENEALREEV 743
Cdd:COG4717 233 ENELEAAA-----LEERLKEARLLLLIAAALLALLGLGGSLLSLILTiagvlflvlGLLALLFLLLAREKASLGKEAEEL 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 744 ILLSELKSLpseverLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQsnykstdqefqnfk 823
Cdd:COG4717 308 QALPALEEL------EEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEE-------------- 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 824 tLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKfdsslgaLKTELSYKTQELQEKTREVQERL--NEMEQLKEQLENRDS 901
Cdd:COG4717 368 -LEQEIAALLAEAGVEDEEELRAALEQAEEYQE-------LKEELEELEEQLEELLGELEELLeaLDEEELEEELEELEE 439
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2462594594 902 TLQTVEREKTLITEKLQQTLEEVKTLtQEKDDLKQLQESLQIERDQLKSDIHD 954
Cdd:COG4717 440 ELEELEEELEELREELAELEAELEQL-EEDGELAELLQELEELKAELRELAEE 491
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1422-1589 |
4.60e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.21 E-value: 4.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1422 EETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNI--KQISEVQEKVNEL-KQFKEHRKAKDSALQS 1498
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEAlqAEIDKLQAEIAEAeAEIEERREELGERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1499 I--------------ESKM-------LELTNRLQESQ-EEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMK--E 1554
Cdd:COG3883 95 LyrsggsvsyldvllGSESfsdfldrLSALSKIADADaDLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAelE 174
|
170 180 190
....*....|....*....|....*....|....*
gi 2462594594 1555 SQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQK 1589
Cdd:COG3883 175 AQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAE 209
|
|
| Spc7 |
smart00787 |
Spc7 kinetochore protein; This domain is found in cell division proteins which are required ... |
1804-1930 |
4.65e-04 |
|
Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.
Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 45.01 E-value: 4.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1804 NLAQKLHENLEEMKSvmkERDNLRRVEETLKLERDQLKESLQETKArdlEIQQELKTARMLSKEHKETVDKLREKISEKT 1883
Cdd:smart00787 144 GLKEGLDENLEGLKE---DYKLLMKELELLNSIKPKLRDRKDALEE---ELRQLKQLEDELEDCDPTELDRAKEKLKKLL 217
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 2462594594 1884 IQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINE 1930
Cdd:smart00787 218 QEIMIKVKKLEELEEELQELESKIEDLTNKKSELNTEIAEAEKKLEQ 264
|
|
| Spc7 |
smart00787 |
Spc7 kinetochore protein; This domain is found in cell division proteins which are required ... |
1357-1486 |
4.86e-04 |
|
Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.
Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 45.01 E-value: 4.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1357 GLSKRLQESHDEMKS-----------VAKEKDDLQRLQEVLQSESDQLKENIKEIVAKhleTEEELKVAHCCLKEQEETI 1425
Cdd:smart00787 144 GLKEGLDENLEGLKEdykllmkelelLNSIKPKLRDRKDALEEELRQLKQLEDELEDC---DPTELDRAKEKLKKLLQEI 220
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462594594 1426 NELRVNLSEKETEISTIQKQLEAINDKLQ------NKIQEIYEKEEQFNIKQISEVQEKVNELKQFK 1486
Cdd:smart00787 221 MIKVKKLEELEEELQELESKIEDLTNKKSelnteiAEAEKKLEQCRGFTFKEIEKLKEQLKLLQSLT 287
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
831-1447 |
7.36e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 45.10 E-value: 7.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 831 QKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQ-LKEQLENRDSTLQTVERE 909
Cdd:pfam05483 169 EKTKKYEYEREETRQVYMDLNNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEeYKKEINDKEKQVSLLLIQ 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 910 ktlITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSdihdtvnmNIDTQEQLRNALESLKQhqetintlksKISE 989
Cdd:pfam05483 249 ---ITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKE--------LIEKKDHLTKELEDIKM----------SLQR 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 990 EVSRNLHMEENTGETKDEFQQKTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLK------- 1062
Cdd:pfam05483 308 SMSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKiitmelq 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1063 EKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQK 1142
Cdd:pfam05483 388 KKSSELEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEE 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1143 SFETERDHLRG-----YIREIEATG------LQTKE---ELKIAHIHLKEHQETIDELRRSVSEKTAQIintQDLEKSHT 1208
Cdd:pfam05483 468 HYLKEVEDLKTelekeKLKNIELTAhcdkllLENKEltqEASDMTLELKKHQEDIINCKKQEERMLKQI---ENLEEKEM 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1209 KLQEEIPVLHEE-----QELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKER 1283
Cdd:pfam05483 545 NLRDELESVREEfiqkgDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKG 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1284 DNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNEttKIVSEMEQFKPKDSALLRIEIEmlgLSKRLQ 1363
Cdd:pfam05483 625 SAENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKISEE--KLLEEVEKAKAIADEAVKLQKE---IDKRCQ 699
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1364 ESHDEMKSvakekddlqrLQEVLQSESDQLKEnikeivakhlETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQ 1443
Cdd:pfam05483 700 HKIAEMVA----------LMEKHKHQYDKIIE----------ERDSELGLYKNKEQEQSSAKAALEIELSNIKAELLSLK 759
|
....
gi 2462594594 1444 KQLE 1447
Cdd:pfam05483 760 KQLE 763
|
|
| Mitofilin |
pfam09731 |
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. ... |
951-1454 |
7.89e-04 |
|
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. Mitofilin is enriched in the narrow space between the inner boundary and the outer membranes, where it forms a homotypic interaction and assembles into a large multimeric protein complex. The first 78 amino acids contain a typical amino-terminal-cleavable mitochondrial presequence rich in positive-charged and hydroxylated residues and a membrane anchor domain. In addition, it has three centrally located coiled coil domains.
Pssm-ID: 430783 [Multi-domain] Cd Length: 618 Bit Score: 44.75 E-value: 7.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 951 DIHDTVNMNIDTQEQLRN-ALESLKQHQETINTLKSKISEEVSRnlhMEENTGETKDEFQQKTIENQEELRLLGDELKKQ 1029
Cdd:pfam09731 31 NFRDFFEEYIPYGEEVVLyALGEDPPLAPKPKTFRPLQPSVVSA---VTGESKEPKEEKKQVKIPRQSGVSSEVAEEEKE 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1030 QEIVAQEKNHAIKKEGElsrtcDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKinEIENLKNELKNKELTLEHM 1109
Cdd:pfam09731 108 ATKDAAEAKAQLPKSEQ-----EKEKALEEVLKEAISKAESATAVAKEAKDDAIQAVKA--HTDSLKEASDTAEISREKA 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1110 ETERLELAQKLNENYEEVKSITKERKVLKelqksfeterdhLRGYIREIEATGLQTKEELKIAHIHLKEHQET---IDEL 1186
Cdd:pfam09731 181 TDSALQKAEALAEKLKEVINLAKQSEEEA------------APPLLDAAPETPPKLPEHLDNVEEKVEKAQSLaklVDQY 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1187 RRSVSEktAQIINTQDLEKSHTklqeeipvlheeqELLPNVKEvsetqetmnelelLTEQSTTKDSTTLARIEMERLRLN 1266
Cdd:pfam09731 249 KELVAS--ERIVFQQELVSIFP-------------DIIPVLKE-------------DNLLSNDDLNSLIAHAHREIDQLS 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1267 EKFQESQEEIKsltkerdnlKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNmKEKDNETTKIVSEMEQfkpkds 1346
Cdd:pfam09731 301 KKLAELKKREE---------KHIERALEKQKEELDKLAEELSARLEEVRAADEAQLR-LEFEREREEIRESYEE------ 364
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1347 aLLRIEIEmlglskRLQESHDEmksvakekddlqRLQEVLQSESDQLKENIKEIVAKHLETEEELkvahcclkeQEETIN 1426
Cdd:pfam09731 365 -KLRTELE------RQAEAHEE------------HLKDVLVEQEIELQREFLQDIKEKVEEERAG---------RLLKLN 416
|
490 500
....*....|....*....|....*...
gi 2462594594 1427 ELRVNLSEKETEISTIqKQLEAINDKLQ 1454
Cdd:pfam09731 417 ELLANLKGLEKATSSH-SEVEDENRKAQ 443
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
347-1097 |
8.52e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 44.96 E-value: 8.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 347 RYRKEIMDLKKQLEEVSLETRAQAME--KDQLAQLLEEKDLLQKVQNEKIENLTRMLVTsssltlqQELKAKRKRRVTWC 424
Cdd:TIGR00618 193 HGKAELLTLRSQLLTLCTPCMPDTYHerKQVLEKELKHLREALQQTQQSHAYLTQKREA-------QEEQLKKQQLLKQL 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 425 LGKINKMKNSNyADQFNIPTNITTKTHKLSINLLREidesvcsesdvfsntldTLSEIEWNPATKLLNQENIESELNSLR 504
Cdd:TIGR00618 266 RARIEELRAQE-AVLEETQERINRARKAAPLAAHIK-----------------AVTQIEQQAQRIHTELQSKMRSRAKLL 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 505 ADYDNLVLDYEQLRTEKEEMELKLKEKNDLDEF--EALERKTKKDQEMQLIHEISNLKNLVKHAEvynqDLENELSSKVE 582
Cdd:TIGR00618 328 MKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAheVATSIREISCQQHTLTQHIHTLQQQKTTLT----QKLQSLCKELD 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 583 LLREKEDQIKKLQEyidSQKLENIKMDLSYSLESIEDPKQMKQTLFDAET--VALDAKRESAFLRSENLELKEKMKELAT 660
Cdd:TIGR00618 404 ILQREQATIDTRTS---AFRDLQGQLAHAKKQQELQQRYAELCAAAITCTaqCEKLEKIHLQESAQSLKEREQQLQTKEQ 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 661 TYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLtslidGKVPKDLLCNLELEGKITDLQKELNKEVEENEALR 740
Cdd:TIGR00618 481 IHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDI-----DNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSER 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 741 EevillsELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVhkesRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQ 820
Cdd:TIGR00618 556 K------QRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITV----RLQDLTEKLSEAEDMLACEQHALLRKLQPEQ 625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 821 NFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKtrEVQERLNEMEQLKEQLENRD 900
Cdd:TIGR00618 626 DLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQ--KMQSEKEQLTYWKEMLAQCQ 703
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 901 STLQ---TVEREKTLITEKLQQTLEEVKTLTQEKDDLkqLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQ 977
Cdd:TIGR00618 704 TLLReleTHIEEYDREFNEIENASSSLGSDLAAREDA--LNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELS 781
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 978 ETINTLKSKISEevsrnlhMEENTGETKdefqQKTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEV 1057
Cdd:TIGR00618 782 HLAAEIQFFNRL-------REEDTHLLK----TLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQ 850
|
730 740 750 760
....*....|....*....|....*....|....*....|
gi 2462594594 1058 EEKLKEKSQQLQEKQQQllnvQEEMSEMQKKINEIENLKN 1097
Cdd:TIGR00618 851 LLKYEECSKQLAQLTQE----QAKIIQLSDKLNGINQIKI 886
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
1338-1770 |
9.58e-04 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 44.56 E-value: 9.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1338 MEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCC 1417
Cdd:COG5185 88 FLKEKKLDTKILQEYVNSLIKLPNYEWSADILISLLYLYKSEIVALKDELIKVEKLDEIADIEASYGEVETGIIKDIFGK 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1418 LKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNiKQISEVQEKVNELKQFKEHRKAKDSALQ 1497
Cdd:COG5185 168 LTQELNQNLKKLEIFGLTLGLLKGISELKKAEPSGTVNSIKESETGNLGSE-STLLEKAKEIINIEEALKGFQDPESELE 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1498 SIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCE 1577
Cdd:COG5185 247 DLAQTSDKLEKLVEQNTDLRLEKLGENAESSKRLNENANNLIKQFENTKEKIAEYTKSIDIKKATESLEEQLAAAEAEQE 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1578 IEHLKEQFETQKLNL-ENIETENIRLTQILHENLEEMRSVTKERdDLRSVEETLKVERDQLKENLRE--TITRDLEK--Q 1652
Cdd:COG5185 327 LEESKRETETGIQNLtAEIEQGQESLTENLEAIKEEIENIVGEV-ELSKSSEELDSFKDTIESTKESldEIPQNQRGyaQ 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1653 EELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRI-----AHMHLKEQQETIDKLRG 1727
Cdd:COG5185 406 EILATLEDTLKAADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVMREADEESQSrleeaYDEINRSVRSKKEDLNE 485
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 2462594594 1728 IVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKD 1770
Cdd:COG5185 486 ELTQIESRVSTLKATLEKLRAKLERQLEGVRSKLDQVAESLKD 528
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
515-1063 |
1.00e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.75 E-value: 1.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 515 EQLRTEKEEMELKLKEKNDLDEFEALERKTKKD--QEMQLIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIK 592
Cdd:PTZ00121 1325 EEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADeaEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDK 1404
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 593 KLQEYIDSQKLENIKMD-LSYSLESIEDPKQMKQTLFDAETVALDAKRESAFLRSENL----ELKEKMKELATTYKQMEN 667
Cdd:PTZ00121 1405 KKADELKKAAAAKKKADeAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAkkkaEEAKKADEAKKKAEEAKK 1484
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 668 DIQLYQSQLEAKKKMQvdlekELQSAFNEITKLTSLIDGKVPK--DLLCNLELEGKITDLQKELNK----EVEENEALR- 740
Cdd:PTZ00121 1485 ADEAKKKAEEAKKKAD-----EAKKAAEAKKKADEAKKAEEAKkaDEAKKAEEAKKADEAKKAEEKkkadELKKAEELKk 1559
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 741 -EEVILLSELK-------SLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNY 812
Cdd:PTZ00121 1560 aEEKKKAEEAKkaeedknMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLK 1639
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 813 KSTDQEFQNFKTLHMDfEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQE---LQEKTREVQERLNEM 889
Cdd:PTZ00121 1640 KKEAEEKKKAEELKKA-EEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEakkAEELKKKEAEEKKKA 1718
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 890 EQLKEQLENRDSTLQTVEREKtlitEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNA 969
Cdd:PTZ00121 1719 EELKKAEEENKIKAEEAKKEA----EEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRM 1794
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 970 LESLKQHQETINTlkSKISEEVSRNLHMEENTGETKDEFQQKTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSR 1049
Cdd:PTZ00121 1795 EVDKKIKDIFDNF--ANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNK 1872
|
570
....*....|....
gi 2462594594 1050 TCDRLAEVEEKLKE 1063
Cdd:PTZ00121 1873 EKDLKEDDEEEIEE 1886
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1722-1881 |
1.01e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 43.37 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1722 IDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKD--QSLTLSKlE 1799
Cdd:COG1579 19 LDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNnkEYEALQK-E 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1800 IENLNLAQKLHEnlEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARmlsKEHKETVDKLREKI 1879
Cdd:COG1579 98 IESLKRRISDLE--DEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAEL---EELEAEREELAAKI 172
|
..
gi 2462594594 1880 SE 1881
Cdd:COG1579 173 PP 174
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
346-798 |
1.02e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 44.72 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 346 KRYRKEIMDLKKQLEEVSLETRAQAMEKDQLAQ-----------LL-----EEKDL-LQKVQNEKIENLTrmlvTSSSLT 408
Cdd:pfam15921 338 RMYEDKIEELEKQLVLANSELTEARTERDQFSQesgnlddqlqkLLadlhkREKELsLEKEQNKRLWDRD----TGNSIT 413
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 409 LQ-------------QELKAKRKRRVTWCLGKINKMKNSNYADQFNIpTNITTKTHKL--SINLLREIDESVCSESDVFS 473
Cdd:pfam15921 414 IDhlrrelddrnmevQRLEALLKAMKSECQGQMERQMAAIQGKNESL-EKVSSLTAQLesTKEMLRKVVEELTAKKMTLE 492
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 474 NTLDTLSEIEWNPATKLLNQENIESELNSLRADYDNLVLDYEQLRTEKEEMelklkeKNDLDEFEALE-RKTKKDQEMQL 552
Cdd:pfam15921 493 SSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHL------RNVQTECEALKlQMAEKDKVIEI 566
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 553 I-HEISNLKNLVKH-------AEVYNQDLENELSSK------VELLREKED-QIKKLQEYIDSQKLENIKM--DLSYSLE 615
Cdd:pfam15921 567 LrQQIENMTQLVGQhgrtagaMQVEKAQLEKEINDRrlelqeFKILKDKKDaKIRELEARVSDLELEKVKLvnAGSERLR 646
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 616 SIEDPKQMK-QTLFDAETVALDAKRESAFLRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKElqsaf 694
Cdd:pfam15921 647 AVKDIKQERdQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGS----- 721
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 695 neitkltsliDGKVPKDLLcnlelegkitDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQDK-SEELHII 773
Cdd:pfam15921 722 ----------DGHAMKVAM----------GMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKlSQELSTV 781
|
490 500
....*....|....*....|....*
gi 2462594594 774 TSEKDKLFSEVVHKESRVQGLLEEI 798
Cdd:pfam15921 782 ATEKNKMAGELEVLRSQERRLKEKV 806
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
1779-2004 |
1.07e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 44.35 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1779 SEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKE-RDNLRRVEETLKLERDQLKESLQETKARdleiQQE 1857
Cdd:pfam05557 9 ARLSQLQNEKKQMELEHKRARIELEKKASALKRQLDRESDRNQElQKRIRLLEKREAEAEEALREQAELNRLK----KKY 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1858 LKTARMLSKEHKETVDKLREKISEKTIQISDIQKdldkskdELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQ 1937
Cdd:pfam05557 85 LEALNKKLNEKESQLADAREVISCLKNELSELRR-------QIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQN 157
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462594594 1938 FEAQNLSMQSVRMDNFQLTKKLHESLEEIRIVAKERDELRRIKEslkMERDqfIATLREMIARDRQN 2004
Cdd:pfam05557 158 LEKQQSSLAEAEQRIKELEFEIQSQEQDSEIVKNSKSELARIPE---LEKE--LERLREHNKHLNEN 219
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
1239-1521 |
1.23e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 44.18 E-value: 1.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1239 ELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKER-DNLKTIKEALEVKHDQLKEHIRETLAKIQESQSK 1317
Cdd:COG5185 232 EEALKGFQDPESELEDLAQTSDKLEKLVEQNTDLRLEKLGENAESsKRLNENANNLIKQFENTKEKIAEYTKSIDIKKAT 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1318 QEQSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKdDLQRLQEVLQSESDQLKENI 1397
Cdd:COG5185 312 ESLEEQLAAAEAEQELEESKRETETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEV-ELSKSSEELDSFKDTIESTK 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1398 KEIVAKHLETEEELKVAhccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQE 1477
Cdd:COG5185 391 ESLDEIPQNQRGYAQEI---LATLEDTLKAADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVMREADEESQSRLEE 467
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 2462594594 1478 KVNELKQFKEHRKAK-DSALQSIESKMLELTNRLQESQEEIQIMI 1521
Cdd:COG5185 468 AYDEINRSVRSKKEDlNEELTQIESRVSTLKATLEKLRAKLERQL 512
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
871-1122 |
1.45e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 44.13 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 871 KTQELQEKTREVQERLnemEQLKEQLENRDSTLQTVEREktliTEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKS 950
Cdd:PRK11281 67 QTLALLDKIDRQKEET---EQLKQQLAQAPAKLRQAQAE----LEALKDDNDEETRETLSTLSLRQLESRLAQTLDQLQN 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 951 DIHDTVNMNID-----TQ-EQLRNAL-ESLKQHQETINTLKS-KISEEVSRN-----LHMEENTGETKDEFQQKTIENQE 1017
Cdd:PRK11281 140 AQNDLAEYNSQlvslqTQpERAQAALyANSQRLQQIRNLLKGgKVGGKALRPsqrvlLQAEQALLNAQNDLQRKSLEGNT 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1018 ELRLLGdelKKQQEIVAQEKNHaIKKEGELSRTC---DRLAEVEEKLKEksqqlqekqqqllnvqeemSEMQKKINEIEN 1094
Cdd:PRK11281 220 QLQDLL---QKQRDYLTARIQR-LEHQLQLLQEAinsKRLTLSEKTVQE-------------------AQSQDEAARIQA 276
|
250 260
....*....|....*....|....*....
gi 2462594594 1095 lkNELKNKELTLEHMETERL-ELAQKLNE 1122
Cdd:PRK11281 277 --NPLVAQELEINLQLSQRLlKATEKLNT 303
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
867-1160 |
1.47e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 44.17 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 867 ELSYKTQELQEKTREVQERLNEMEQLKEQLEnrdstlQTVEREKT-----------LITEKLQ-----QTLEEVKTLTQE 930
Cdd:COG3096 358 ELTERLEEQEEVVEEAAEQLAEAEARLEAAE------EEVDSLKSqladyqqaldvQQTRAIQyqqavQALEKARALCGL 431
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 931 KD-DLKQLQESLQIERDQLKSdIHDTVnmnIDTQEQLRNALESLKQHQETINTLKsKISEEVSRnlhmeENTGETKDEF- 1008
Cdd:COG3096 432 PDlTPENAEDYLAAFRAKEQQ-ATEEV---LELEQKLSVADAARRQFEKAYELVC-KIAGEVER-----SQAWQTARELl 501
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1009 -----QQKTIENQEELRLLGDELKKQqeivAQEKNHAIKKEGELS----RTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQ 1079
Cdd:COG3096 502 rryrsQQALAQRLQQLRAQLAELEQR----LRQQQNAERLLEEFCqrigQQLDAAEELEELLAELEAQLEELEEQAAEAV 577
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1080 EEMSEMQKKINEIENLKNELKNKE---LTLEhmetERLE-LAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYI 1155
Cdd:COG3096 578 EQRSELRQQLEQLRARIKELAARApawLAAQ----DALErLREQSGEALADSQEVTAAMQQLLEREREATVERDELAARK 653
|
....*
gi 2462594594 1156 REIEA 1160
Cdd:COG3096 654 QALES 658
|
|
| ATG17_like |
pfam04108 |
Autophagy protein ATG17-like domain; This domain is found in the autophagy-related proteins ... |
1752-2049 |
1.49e-03 |
|
Autophagy protein ATG17-like domain; This domain is found in the autophagy-related proteins ATG17 and ATG11, conserved across eukaryotes. ATG17 forms a complex with ATG29 and ATG31, critical for both PAS (preautophagosomal structure) formation and autophagy. Together with ATG13, it is required for ATG1 kinase activation. ATG11 is a scaffold protein required for the cytoplasm-to-vacuole targeting (Cvt) pathway during starvation and to recruit ATG proteins to the pre-autophagosome. It is also required for ATG1 kinase activation. In many eukaryotes, ATG11 (the orthologue in mammals is RB1-inducible coiled-coil protein 1 (RB1CC1) and in S. pombe is Taz1-interacting factor 1 (taf1)) is essential for bulk autophagy, except in S.cerevisiae. ATG17 and ATG11 are large similar proteins, both predicted to be almost entirely helical, containing conserved coiled-coil regions and lack obvious functional motifs.
Pssm-ID: 427715 [Multi-domain] Cd Length: 360 Bit Score: 43.53 E-value: 1.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1752 EKIQELKANEHQLITL-KKDVNETQKKVSEMEQLKKQIKDQSLTLSKLeieNLNLAQKLHENLEEMKSVMKERDNL-RRV 1829
Cdd:pfam04108 3 SSAQDLCRWANELLTDaRSLLEELVVLLAKIAFLRRGLSVQLANLEKV---REGLEKVLNELKKDFKQLLKDLDAAlERL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1830 EETLklerdqlkESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQK 1909
Cdd:pfam04108 80 EETL--------DKLRNTPVEPALPPGEEKQKTLLDFIDEDSVEILRDALKELIDELQAAQESLDSDLKRFDDDLRDLQK 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1910 KELQLLRVKEDVNMSHKKINEMEQLKKQFeAQNLSM---------------QSVRMDNFQLTKKLHESLEEIRIVAKER- 1973
Cdd:pfam04108 152 ELESLSSPSESISLIPTLLKELESLEEEM-ASLLESltnhydqcvtavkltEGGRAEMLEVLENDARELDDVVPELQDRl 230
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462594594 1974 DELRRIKESLKMERDQFIATLREMIARDRQNHQVKpeKRLLSDG--QQHLTESLREKCSRIKELLKRYSEMDDHYECL 2049
Cdd:pfam04108 231 DEMENNYERLQKLLEQKNSLIDELLSALQLIAEIQ--SRLPEYLaaLKEFEERWEEEKETIEDYLSELEDLREFYEGF 306
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
849-977 |
1.61e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 44.05 E-value: 1.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 849 NLSKEAQKFD---SSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLEnrdstlqtvEREKTLITEKLQQTLEEVK 925
Cdd:PRK00409 510 LIGEDKEKLNeliASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQ---------EEEDKLLEEAEKEAQQAIK 580
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2462594594 926 TLTQEKDD-LKQLQESLQIERDQLKSdiHDTvnmnIDTQEQLRNALESLKQHQ 977
Cdd:PRK00409 581 EAKKEADEiIKELRQLQKGGYASVKA--HEL----IEARKRLNKANEKKEKKK 627
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1360-2038 |
1.66e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.14 E-value: 1.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1360 KRLQESHDEMKSVAKEKDDLQRL------------QEVLQSESDQLKENIKEIVAKHLETEEELKvahcclkEQEETINE 1427
Cdd:COG4913 255 EPIRELAERYAAARERLAELEYLraalrlwfaqrrLELLEAELEELRAELARLEAELERLEARLD-------ALREELDE 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1428 LRVNLSEKETE-ISTIQKQLEAINDKLQNKIQ--EIYEKE-EQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKM 1503
Cdd:COG4913 328 LEAQIRGNGGDrLEQLEREIERLERELEERERrrARLEALlAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEAL 407
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1504 LELTNRLQESQEEIQIMIKEKEEMKRVQ----EALQIERDQLKENTKEIVAKM---------KESQEK------------ 1558
Cdd:COG4913 408 AEAEAALRDLRRELRELEAEIASLERRKsnipARLLALRDALAEALGLDEAELpfvgelievRPEEERwrgaiervlggf 487
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1559 --------EY--QFLKmtAVNETqekmceieHLKEQFETQKLNLENIETENIR-----LTQIL----HENLEEMRSVTKE 1619
Cdd:COG4913 488 altllvppEHyaAALR--WVNRL--------HLRGRLVYERVRTGLPDPERPRldpdsLAGKLdfkpHPFRAWLEAELGR 557
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1620 RDDLRSVEETlkverDQLKeNLRETITRD-LEKQE----ELKIVHMHLKEH---QETIDKLRgivsEKTNEISNMQKDLE 1691
Cdd:COG4913 558 RFDYVCVDSP-----EELR-RHPRAITRAgQVKGNgtrhEKDDRRRIRSRYvlgFDNRAKLA----ALEAELAELEEELA 627
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1692 HSNDALKA--QDLKIQEELRIAHMHLKEQQETIDKLRGIVSEkTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKK 1769
Cdd:COG4913 628 EAEERLEAleAELDALQERREALQRLAEYSWDEIDVASAERE-IAELEAELERLDASSDDLAALEEQLEELEAELEELEE 706
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1770 DVNETQKKVSEMEQLKKQIKDQsltlskleienlnlaqklhenLEEMKSVMKERDNLRRVEETLKLErDQLKESLQETKA 1849
Cdd:COG4913 707 ELDELKGEIGRLEKELEQAEEE---------------------LDELQDRLEAAEDLARLELRALLE-ERFAAALGDAVE 764
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1850 RDL--EIQQELKTARmlsKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQK-KELQLLRVKEdvnmshk 1926
Cdd:COG4913 765 RELreNLEERIDALR---ARLNRAEEELERAMRAFNREWPAETADLDADLESLPEYLALLDRlEEDGLPEYEE------- 834
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1927 kinEMEQLKKQFEAQNLSmqsvrmdnfQLTKKLHESLEEIrivakeRDELRRIKESLKM---ERDQFIatlrEMIARDRQ 2003
Cdd:COG4913 835 ---RFKELLNENSIEFVA---------DLLSKLRRAIREI------KERIDPLNDSLKRipfGPGRYL----RLEARPRP 892
|
730 740 750
....*....|....*....|....*....|....*....
gi 2462594594 2004 NHQVKPEKRLL---SDGQQHLTESLREK-CSRIKELLKR 2038
Cdd:COG4913 893 DPEVREFRQELravTSGASLFDEELSEArFAALKRLIER 931
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1009-1224 |
1.66e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 1.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1009 QQKTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEksqqlqekqqqllnVQEEMSEMQKK 1088
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRA--------------LEQELAALEAE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1089 INEIENLKNELKNKELTLEHMETERLELAQKLNE--------NYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEA 1160
Cdd:COG4942 85 LAELEKEIAELRAELEAQKEELAELLRALYRLGRqpplalllSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAA 164
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462594594 1161 TGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIintQDLEKSHTKLQEEIPVLHEEQELL 1224
Cdd:COG4942 165 LRAELEAERAELEALLAELEEERAALEALKAERQKLL---ARLEKELAELAAELAELQQEAEEL 225
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1261-1462 |
1.88e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 43.46 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1261 ERLRLNEKFQESQEEIKS---------LTKERDNLKTIKEALEVKHDQLKEHIREtlakiQESQSKQEQSLNMKekdneT 1331
Cdd:PHA02562 195 QQIKTYNKNIEEQRKKNGeniarkqnkYDELVEEAKTIKAEIEELTDELLNLVMD-----IEDPSAALNKLNTA-----A 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1332 TKIVSEMEQFKpKDSALLRIEIE----MLGLS---KRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEI--VA 1402
Cdd:PHA02562 265 AKIKSKIEQFQ-KVIKMYEKGGVcptcTQQISegpDRITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQSKKLleLK 343
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462594594 1403 KHLETEE-ELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYE 1462
Cdd:PHA02562 344 NKISTNKqSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKEKYH 404
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
604-1195 |
1.88e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 43.56 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 604 ENIKMDLSYSLEsiEDPKQMKQTLFDAETVALDAKRESAFLRSENLELKEKMKELATTYKQMENDIqlyqSQLEAKKKMQ 683
Cdd:pfam05483 207 ENARLEMHFKLK--EDHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKA----NQLEEKTKLQ 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 684 VDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEV--------ILLSELKSLPSE 755
Cdd:pfam05483 281 DENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELnkakaahsFVVTEFEATTCS 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 756 VERL----RKEIQDKSEELHIITSEKDKLFSEvvhkesrvqglLEEIGKTKDDLATTQSNYKSTDQEFQNFktlhMDFEQ 831
Cdd:pfam05483 361 LEELlrteQQRLEKNEDQLKIITMELQKKSSE-----------LEEMTKFKNNKEVELEELKKILAEDEKL----LDEKK 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 832 KYKMVLEENERMNQEIVNL----SKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVE 907
Cdd:pfam05483 426 QFEKIAEELKGKEQELIFLlqarEKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELT 505
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 908 REKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALEslkQHQETINTLKSKI 987
Cdd:pfam05483 506 QEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLD---KSEENARSIEYEV 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 988 SEEVSRNLHMEENTGETKDEFQQKTiENQEELRLLGDELKKQQEIVAQEKN----HAIKKEGELSRTCDRLAEVEEKLKE 1063
Cdd:pfam05483 583 LKKEKQMKILENKCNNLKKQIENKN-KNIEELHQENKALKKKGSAENKQLNayeiKVNKLELELASAKQKFEEIIDNYQK 661
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1064 KsqqLQEKQQQLLNVQEEMSEMQKKINEIENLKNELknkELTLEHMETERLELAQKLNENYEEvksITKERKVLKELQKS 1143
Cdd:pfam05483 662 E---IEDKKISEEKLLEEVEKAKAIADEAVKLQKEI---DKRCQHKIAEMVALMEKHKHQYDK---IIEERDSELGLYKN 732
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|..
gi 2462594594 1144 FETERDHLRGYIrEIEATGLqtKEELKIAHIHLKEHQETIDELRRSVSEKTA 1195
Cdd:pfam05483 733 KEQEQSSAKAAL-EIELSNI--KAELLSLKKQLEIEKEEKEKLKMEAKENTA 781
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1221-1879 |
1.92e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.75 E-value: 1.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1221 QELLPNVKEVSETQETM----NELELLTE-----QSTTKDSTTLARIEMERLRLN-----EKFQESQEEIKSLTKERDNL 1286
Cdd:COG4913 228 DALVEHFDDLERAHEALedarEQIELLEPirelaERYAAARERLAELEYLRAALRlwfaqRRLELLEAELEELRAELARL 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1287 KTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKivSEMEQfkpkDSALLRIEIEMLGLSkrLQESH 1366
Cdd:COG4913 308 EAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLEREL--EERER----RRARLEALLAALGLP--LPASA 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1367 DEMKSVAKEkddLQRLQEVLQSESDQLKENIKEIVAKHLETEEElkvahccLKEQEETINELR---VNLSEKETEIstiq 1443
Cdd:COG4913 380 EEFAALRAE---AAALLEALEEELEALEEALAEAEAALRDLRRE-------LRELEAEIASLErrkSNIPARLLAL---- 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1444 kqLEAINDKLQNKIQ---------EIYEKEEQ-------------FNI----KQISEVQEKVNELKQ------FKEHRKA 1491
Cdd:COG4913 446 --RDALAEALGLDEAelpfvgeliEVRPEEERwrgaiervlggfaLTLlvppEHYAAALRWVNRLHLrgrlvyERVRTGL 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1492 KDSALQSIESKML--ELTNRLQESQEEIQIMIKEK---------EEMKRVQEALQIERdQLKENtKEIVAKMKESQEKEY 1560
Cdd:COG4913 524 PDPERPRLDPDSLagKLDFKPHPFRAWLEAELGRRfdyvcvdspEELRRHPRAITRAG-QVKGN-GTRHEKDDRRRIRSR 601
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1561 QFLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETEnIRLTQILHENLEEMRSVTKERDDLRSVEETLkVERDQLKEN 1640
Cdd:COG4913 602 YVLGFDNRAKLAALEAELAELEEELAEAEERLEALEAE-LDALQERREALQRLAEYSWDEIDVASAEREI-AELEAELER 679
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1641 LRETiTRDLEK-QEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIahmHLKEQ- 1718
Cdd:COG4913 680 LDAS-SDDLAAlEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRA---LLEERf 755
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1719 -QETIDKLRGIVSEK-TDKLSNMQKDLENSNAKLQEKIQELK----ANEHQLITLKKDVNETQK-----KVSEMEQLKKQ 1787
Cdd:COG4913 756 aAALGDAVERELRENlEERIDALRARLNRAEEELERAMRAFNrewpAETADLDADLESLPEYLAlldrlEEDGLPEYEER 835
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1788 IKDQsltLSKLEIENL-NLAQKLHENLEEMKSVMKE-RDNLRRVE----ETLKLE-RDQLKESLQE--TKARDLEIQQEL 1858
Cdd:COG4913 836 FKEL---LNENSIEFVaDLLSKLRRAIREIKERIDPlNDSLKRIPfgpgRYLRLEaRPRPDPEVREfrQELRAVTSGASL 912
|
730 740
....*....|....*....|.
gi 2462594594 1859 KTARmLSKEHKETVDKLREKI 1879
Cdd:COG4913 913 FDEE-LSEARFAALKRLIERL 932
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1512-1760 |
1.93e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.75 E-value: 1.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1512 ESQEEIQIMIKEKEEMKRVQEALQIERDQLkentkEIVAKMKESQEkEYQflkmtavnETQEKMCEIEHLKEqfetqKLN 1591
Cdd:COG4913 222 DTFEAADALVEHFDDLERAHEALEDAREQI-----ELLEPIRELAE-RYA--------AARERLAELEYLRA-----ALR 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1592 LENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEK-QEELKivhmHLKEHQETID 1670
Cdd:COG4913 283 LWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQlEREIE----RLERELEERE 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1671 KLRGIVSEKTNEIsnmQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRgivsektDKLSNMQKDLEnsnaKL 1750
Cdd:COG4913 359 RRRARLEALLAAL---GLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAE-------AALRDLRRELR----EL 424
|
250
....*....|
gi 2462594594 1751 QEKIQELKAN 1760
Cdd:COG4913 425 EAEIASLERR 434
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
916-1583 |
1.93e-03 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 43.91 E-value: 1.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 916 KLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEVSRNL 995
Cdd:COG5022 798 KLQPLLSLLGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKKETIYLQSAQRV 877
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 996 HmeentgETKDEFQQKTIENQE--ELRLLGDELKKQ-QEIVAQEKNHAIKKEGELSRTCDRLAEVEEK--LKEKSQQLQE 1070
Cdd:COG5022 878 E------LAERQLQELKIDVKSisSLKLVNLELESEiIELKKSLSSDLIENLEFKTELIARLKKLLNNidLEEGPSIEYV 951
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1071 KQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKElqksfeterdh 1150
Cdd:COG5022 952 KLPELNKLHEVESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKE----------- 1020
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1151 lrgyiREIEATGLQTkEELKIAHIHLKEHQET-IDELRRsvsektaqiintqDLEKSHTKLQEEIPVLHEEQELLPNVKE 1229
Cdd:COG5022 1021 -----LPVEVAELQS-ASKIISSESTELSILKpLQKLKG-------------LLLLENNQLQARYKALKLRRENSLLDDK 1081
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1230 VSETQET----MNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLK---- 1301
Cdd:COG5022 1082 QLYQLEStenlLKTINVKDLEVTNRNLVKPANVLQFIVAQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQLELDglfw 1161
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1302 -EHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQEShdemksvAKEKDDLQ 1380
Cdd:COG5022 1162 eANLEALPSPPPFAALSEKRLYQSALYDEKSKLSSSEVNDLKNELIALFSKIFSGWPRGDKLKKL-------ISEGWVPT 1234
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1381 RLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEEtinelrvnlsEKETEISTIQKQLEAINDKLQNkiqEI 1460
Cdd:COG5022 1235 EYSTSLKGFNNLNKKFDTPASMSNEKLLSLLNSIDNLLSSYKL----------EEEVLPATINSLLQYINVGLFN---AL 1301
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1461 YEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIEskmleltnrLQESQEEIQIMIKEKEEMKRV----QEALQI 1536
Cdd:COG5022 1302 RTKASSLRWKSATEVNYNSEELDDWCREFEISDVDEELEE---------LIQAVKVLQLLKDDLNKLDELldacYSLNPA 1372
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*..
gi 2462594594 1537 ERDQLKEN----------TKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKE 1583
Cdd:COG5022 1373 EIQNLKSRydpadkennlPKEILKKIEALLIKQELQLSLEGKDETEVHLSEIFSEEK 1429
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
685-1205 |
1.99e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 43.74 E-value: 1.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 685 DLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQ 764
Cdd:PRK01156 187 YLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAESDLS 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 765 DKSEELHIITSEKDKLF----SEVVHKESRVQGL------------------------------LEEIGKTKDDLATTQS 810
Cdd:PRK01156 267 MELEKNNYYKELEERHMkiinDPVYKNRNYINDYfkykndienkkqilsnidaeinkyhaiikkLSVLQKDYNDYIKKKS 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 811 NYKSTDQEFQNFKTLHMDF-------EQKYKMVLEEN---ERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTR 880
Cdd:PRK01156 347 RYDDLNNQILELEGYEMDYnsylksiESLKKKIEEYSkniERMSAFISEILKIQEIDPDAIKKELNEINVKLQDISSKVS 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 881 EVQERLNEMEQLKEQLENRDSTL----------------------QTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQ 938
Cdd:PRK01156 427 SLNQRIRALRENLDELSRNMEMLngqsvcpvcgttlgeeksnhiiNHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRK 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 939 ESLQIERdqlksdihdtVNMNIDTQEQLRNALESLKQHQETINTLKSKiseevsrnlhmEENTGETKDEFQQKTIENQEE 1018
Cdd:PRK01156 507 EYLESEE----------INKSINEYNKIESARADLEDIKIKINELKDK-----------HDKYEEIKNRYKSLKLEDLDS 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1019 LRLLGDELKKQQEIVAQEKNHAIKKE--GELSRTCDRLAEVEeklkeksqqlqekqqqlLNVQEEMSEMQKKINEIENLK 1096
Cdd:PRK01156 566 KRTSWLNALAVISLIDIETNRSRSNEikKQLNDLESRLQEIE-----------------IGFPDDKSYIDKSIREIENEA 628
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1097 NELKNKELTLEHMETERLELAQK---LNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAH 1173
Cdd:PRK01156 629 NNLNNKYNEIQENKILIEKLRGKidnYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILR 708
|
570 580 590
....*....|....*....|....*....|..
gi 2462594594 1174 IHLKEHQETIDELRRSVSEKTAQIINTQDLEK 1205
Cdd:PRK01156 709 TRINELSDRINDINETLESMKKIKKAIGDLKR 740
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1577-1790 |
2.19e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 43.46 E-value: 2.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1577 EIEHLKEQFETQKLNLENIETENirltqilHENLEEMRSVTkerDDLRSVEETLKVERDQLKENLREtITRDLEKQEE-- 1654
Cdd:PHA02562 189 KIDHIQQQIKTYNKNIEEQRKKN-------GENIARKQNKY---DELVEEAKTIKAEIEELTDELLN-LVMDIEDPSAal 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1655 -----------------LKIVHMHlKEHQE------TIDKLRGIVSEKTNEISNMQKDLEHSNDALKaQDLKIQEELRIA 1711
Cdd:PHA02562 258 nklntaaakikskieqfQKVIKMY-EKGGVcptctqQISEGPDRITKIKDKLKELQHSLEKLDTAID-ELEEIMDEFNEQ 335
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462594594 1712 HMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKD 1790
Cdd:PHA02562 336 SKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKEKYHRGIVTDLLKD 414
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
830-1150 |
2.26e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 42.97 E-value: 2.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 830 EQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVERE 909
Cdd:COG4372 30 SEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEE 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 910 KTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQH-QETINTLKSKIS 988
Cdd:COG4372 110 AEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALsEAEAEQALDELL 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 989 EEVSRNLHMEENTGETKDEFQQKTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQL 1068
Cdd:COG4372 190 KEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILV 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1069 QEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETER 1148
Cdd:COG4372 270 EKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLVG 349
|
..
gi 2462594594 1149 DH 1150
Cdd:COG4372 350 LL 351
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
492-1601 |
2.29e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 43.89 E-value: 2.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 492 NQENIESELNSlRADYDNLVLDYEQLRTEKEEMELKLKEKnDLDEFealeRKTKKDQEMQLIHEISNLKNLVKHAEVYNQ 571
Cdd:TIGR01612 1377 NNKNIKDELDK-SEKLIKKIKDDINLEECKSKIESTLDDK-DIDEC----IKKIKELKNHILSEESNIDTYFKNADENNE 1450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 572 DLeNELSSKVELLREKEDQIKKLQ--------EYIDSQKLENIKMDLSYSLESIEDPKQMKQTlfdaETVALDAKRESAF 643
Cdd:TIGR01612 1451 NV-LLLFKNIEMADNKSQHILKIKkdnatndhDFNINELKEHIDKSKGCKDEADKNAKAIEKN----KELFEQYKKDVTE 1525
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 644 L--RSENLELKEKMKELATTYKQMENDIQlyqsqlEAKKKMQVDLEKELQSaFNEITKLTSLIDGKVPKDLLCN------ 715
Cdd:TIGR01612 1526 LlnKYSALAIKNKFAKTKKDSEIIIKEIK------DAHKKFILEAEKSEQK-IKEIKKEKFRIEDDAAKNDKSNkaaidi 1598
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 716 -LELEG------KITDLQKELNKEVEENEALREEVILLS-------------ELKSLPSEVERLR---KEIQDKSEELHI 772
Cdd:TIGR01612 1599 qLSLENfenkflKISDIKKKINDCLKETESIEKKISSFSidsqdtelkengdNLNSLQEFLESLKdqkKNIEDKKKELDE 1678
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 773 ITSEKDKLFSEV-VHKESRVQGLLEEIGKT----KDDLATTQSNYKSTdqefqnFKTLHMDFEQKYKMVLEENERM---N 844
Cdd:TIGR01612 1679 LDSEIEKIEIDVdQHKKNYEIGIIEKIKEIaianKEEIESIKELIEPT------IENLISSFNTNDLEGIDPNEKLeeyN 1752
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 845 QEIVNLSKEAQK-FDSSLGALKTELSYKTQELQEKTREVQERlNEMEQLKEQLENRDSTLQTVE-REKTLITEKLQQTLE 922
Cdd:TIGR01612 1753 TEIGDIYEEFIElYNIIAGCLETVSKEPITYDEIKNTRINAQ-NEFLKIIEIEKKSKSYLDDIEaKEFDRIINHFKKKLD 1831
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 923 EVK-TLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNI--DTQEQLRNALE----SLKQHQETINTLKSKISEevSRNL 995
Cdd:TIGR01612 1832 HVNdKFTKEYSKINEGFDDISKSIENVKNSTDENLLFDIlnKTKDAYAGIIGkkyySYKDEAEKIFINISKLAN--SINI 1909
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 996 HMEENTGetKDEFQQKTIEnqeELRLLGDELKKQQEIVAQEKNhaikkEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQL 1075
Cdd:TIGR01612 1910 QIQNNSG--IDLFDNINIA---ILSSLDSEKEDTLKFIPSPEK-----EPEIYTKIRDSYDTLLDIFKKSQDLHKKEQDT 1979
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1076 LNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNE---------NYEEVKSITKERKVlKELQKSFET 1146
Cdd:TIGR01612 1980 LNIIFENQQLYEKIQASNELKDTLSDLKYKKEKILNDVKLLLHKFDElnklscdsqNYDTILELSKQDKI-KEKIDNYEK 2058
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1147 ERdhlRGYIREIEATGLQTKEELKIAHIH-LKEHQETIDELRRSVSEKTAQIIntqdleKSHTKLQEEIPVLHEEQELLP 1225
Cdd:TIGR01612 2059 EK---EKFGIDFDVKAMEEKFDNDIKDIEkFENNYKHSEKDNHDFSEEKDNII------QSKKKLKELTEAFNTEIKIIE 2129
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1226 NvkEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKF-----QESQEEIKSLTKERDNLKTIKEALEVKH--D 1298
Cdd:TIGR01612 2130 D--KIIEKNDLIDKLIEMRKECLLFSYATLVETLKSKVINHSEFitsaaKFSKDFFEFIEDISDSLNDDIDALQIKYnlN 2207
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1299 QLKEHIRETLAKIQESQSkqeqslNMKEKDNETTKIVSEMEQFKPKDS------ALLRIEIEMLGLSKRLQESHDEMKSV 1372
Cdd:TIGR01612 2208 QTKKHMISILADATKDHN------NLIEKEKEATKIINNLTELFTIDFnnadadILHNNKIQIIYFNSELHKSIESIKKL 2281
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1373 AKE----------------KDDLQRLQEVLQSESDQLKENIKEIvaKHLE---TEEELKVAHCCLKEQEETINELR---- 1429
Cdd:TIGR01612 2282 YKKinafkllnishinekyFDISKEFDNIIQLQKHKLTENLNDL--KEIDqyiSDKKNIFLHALNENTNFNFNALKeiyd 2359
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1430 --VNLSEKETEISTI-QKQLEAIND------KLQNKIQEI------YEKEEQFNIKQISEVQEkvNELKQFKEHRKAKDS 1494
Cdd:TIGR01612 2360 diINRENKADEIENInNKENENIMQyidtitKLTEKIQDIlifvttYENDNNIIKQHIQDNDE--NDVSKIKDNLKKTIQ 2437
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1495 ALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQ----EALQIERD--QLKENTKEIVAKMKESQEKEYQFLKMTAV 1568
Cdd:TIGR01612 2438 SFQEILNKIDEIKAQFYGGNNINNIIITISQNANDVKnhfsKDLTIENEliQIQKRLEDIKNAAHEIRSEQITKYTNAIH 2517
|
1210 1220 1230
....*....|....*....|....*....|...
gi 2462594594 1569 NETQEKMCEIEHLKEQFETQKLNLENIETENIR 1601
Cdd:TIGR01612 2518 NHIEEQFKKIENNSNKDEVYKINEIDNIIEKII 2550
|
|
| secA |
PRK12903 |
preprotein translocase subunit SecA; Reviewed |
1093-1384 |
2.48e-03 |
|
preprotein translocase subunit SecA; Reviewed
Pssm-ID: 237258 [Multi-domain] Cd Length: 925 Bit Score: 43.50 E-value: 2.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1093 ENLKNELKNKELTLEHMETERLELAQKLNENYEEvkSITKERKVLKElqksfETERDHLRGYIREIEatglqtkeeLKIA 1172
Cdd:PRK12903 657 DNLLRITHFKFSEKDFENYHKEELAQYLIEALNE--IYFKKRQVILD-----KIALNTFFESERYII---------LSAL 720
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1173 HIHLKEHQETIDELRRSV-----SEKTAQIINTQDLEKSHTKLQEEIPvlheeQELLPNVKEVSETQETMNELELLTEQS 1247
Cdd:PRK12903 721 DKYWQNHIDTMDKLRSGVnlvqySQKNPYQVYTEEGTKKFNILLQEIA-----YDVIVSLFNNPNAEKILIITEILSDGI 795
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1248 TTKDSTTLARIEMERLRLNEkfqesQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEK 1327
Cdd:PRK12903 796 NNSDINDRPQELIDQIIESE-----EERLKALRIQREEMLMRPEELELINEEQKNLKQEIKLELSEIQEAEEEIQNINEN 870
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2462594594 1328 DNettkivsEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQE 1384
Cdd:PRK12903 871 KN-------EFVEFKNDPKKLNKLIIAKDVLIKLVISSDEIKQDEKTTKKKKKDLEK 920
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1811-1977 |
2.58e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.83 E-value: 2.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1811 ENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQ 1890
Cdd:COG1579 7 RALLDLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVR 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1891 -----KDLDKSKDELQKKIQELQKKELQLLRVKEDVNmshKKINEMEQLKKQFEAQNLSMQSvrmdnfQLTKKLHESLEE 1965
Cdd:COG1579 87 nnkeyEALQKEIESLKRRISDLEDEILELMERIEELE---EELAELEAELAELEAELEEKKA------ELDEELAELEAE 157
|
170
....*....|..
gi 2462594594 1966 IRIVAKERDELR 1977
Cdd:COG1579 158 LEELEAEREELA 169
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
496-984 |
2.70e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 43.35 E-value: 2.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 496 IESELNSLRADYDNLVLDYEQLRTEKEEMELKLKEKNDLDEfEALERKTKKDQEMQLIHEISNLKnlvkhaEVYNQDLEN 575
Cdd:PRK01156 216 TLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYES-EIKTAESDLSMELEKNNYYKELE------ERHMKIIND 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 576 ELSSKVELLREKEDQIKKLQEYidSQKLENIKMDLSYSLESIEDPKQMKQTlfdaetvaldakresaflRSENLELKEKM 655
Cdd:PRK01156 289 PVYKNRNYINDYFKYKNDIENK--KQILSNIDAEINKYHAIIKKLSVLQKD------------------YNDYIKKKSRY 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 656 KELATTYKQMENDIQLYQSQL---EAKKKMQVDLEKELQSAFNEITKLTSL--IDGKVPKDLLCNL-----ELEGKITDL 725
Cdd:PRK01156 349 DDLNNQILELEGYEMDYNSYLksiESLKKKIEEYSKNIERMSAFISEILKIqeIDPDAIKKELNEInvklqDISSKVSSL 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 726 QKELNKEVEENEALREEVILLS--------------------------ELKSLPSEVERLRKEIQDKSEELHIITSEKDK 779
Cdd:PRK01156 429 NQRIRALRENLDELSRNMEMLNgqsvcpvcgttlgeeksnhiinhyneKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEY 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 780 LFSEVVHK----ESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHM-DFEQKYKMVLEEN-------------- 840
Cdd:PRK01156 509 LESEEINKsineYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLeDLDSKRTSWLNALavislidietnrsr 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 841 -ERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQ 919
Cdd:PRK01156 589 sNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKIDNYKKQIAEIDSIIPD 668
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462594594 920 TLEEVKTLTQEKDDLKQLQESLQ---IERDQLKSdIHDTVNMNIDTQEQ----LRNALESLKQHQETINTLK 984
Cdd:PRK01156 669 LKEITSRINDIEDNLKKSRKALDdakANRARLES-TIEILRTRINELSDrindINETLESMKKIKKAIGDLK 739
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1003-1128 |
2.73e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 42.84 E-value: 2.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1003 ETKDEFQQKTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKsqqLQEKQQQLLNVQEEM 1082
Cdd:PRK12704 61 EAKEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQK---QQELEKKEEELEELI 137
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 2462594594 1083 SEMQKKINEIENLKNElKNKELTLEHMETE-RLELAQKLNENYEEVK 1128
Cdd:PRK12704 138 EEQLQELERISGLTAE-EAKEILLEKVEEEaRHEAAVLIKEIEEEAK 183
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1787-1941 |
2.85e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.51 E-value: 2.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1787 QIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKT-ARMLS 1865
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGErARALY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1866 KEHK---------------------ETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNms 1924
Cdd:COG3883 97 RSGGsvsyldvllgsesfsdfldrlSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELE-- 174
|
170
....*....|....*..
gi 2462594594 1925 hKKINEMEQLKKQFEAQ 1941
Cdd:COG3883 175 -AQQAEQEALLAQLSAE 190
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
745-899 |
2.85e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.83 E-value: 2.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 745 LLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSN--YKSTDQEFQNF 822
Cdd:COG1579 22 LEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNkeYEALQKEIESL 101
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462594594 823 KTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSyktQELQEKTREVQERLNEMEQLKEQLENR 899
Cdd:COG1579 102 KRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELD---EELAELEAELEELEAEREELAAKIPPE 175
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1614-1850 |
3.15e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.08 E-value: 3.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1614 RSVTKERDDLRSVEETLKVERDQLKENLRETiTRDLEK-QEELKIVhmhlkehqeTIDKLRGIVSEKTNEISNMQKDLEH 1692
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKELEEA-EAALEEfRQKNGLV---------DLSEEAKLLLQQLSELESQLAEARA 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1693 SNDALKAQDLKIQEELRIAHMHLKE--QQETIDKLRGIVSEKTDKLSNMQKDLENSN---AKLQEKIQELKAN-----EH 1762
Cdd:COG3206 234 ELAEAEARLAALRAQLGSGPDALPEllQSPVIQQLRAQLAELEAELAELSARYTPNHpdvIALRAQIAALRAQlqqeaQR 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1763 QLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIE------NLNLAQKLHENLeemksvmkerdnLRRVEETlkle 1836
Cdd:COG3206 314 ILASLEAELEALQAREASLQAQLAQLEARLAELPELEAElrrlerEVEVARELYESL------------LQRLEEA---- 377
|
250
....*....|....
gi 2462594594 1837 rdQLKESLQETKAR 1850
Cdd:COG3206 378 --RLAEALTVGNVR 389
|
|
| RND_1 |
NF037998 |
protein translocase SecDF, variant type; Members of this family are identified by TCDB as ... |
1432-1540 |
3.21e-03 |
|
protein translocase SecDF, variant type; Members of this family are identified by TCDB as belonging to 2.A.6.4.4, a variant 12-TM type SecDF, as found in Spiroplasma, Mesoplasma, and Acholeplasma.
Pssm-ID: 468306 Cd Length: 1237 Bit Score: 43.23 E-value: 3.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1432 LSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFK---EHRKAKDSALQSIESKMLELTN 1508
Cdd:NF037998 639 LTNKEKLSSKLLLKIKKINDKIDLLKKKEENKEAKKNAKLIEKVKAKIKKLEQKItklKLNKKKSNKIIKIRWKKKDWIF 718
|
90 100 110
....*....|....*....|....*....|..
gi 2462594594 1509 RLQESQEEiqIMIKEKEEMKRVQEALQIERDQ 1540
Cdd:NF037998 719 FLKDNTDV--ILAIESEIEIQVIEKIKVKRNE 748
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
1773-1907 |
3.25e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 42.26 E-value: 3.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1773 ETQKKVSEMEQLKKQIKDqsltLSKLeienLNLAQKLHENLEEmkSVMKERDNLRRVE---ETLKLERDQLKESLQETKA 1849
Cdd:PRK09039 47 EISGKDSALDRLNSQIAE----LADL----LSLERQGNQDLQD--SVANLRASLSAAEaerSRLQALLAELAGAGAAAEG 116
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462594594 1850 RDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKD---ELQKKIQEL 1907
Cdd:PRK09039 117 RAGELAQELDSEKQVSARALAQVELLNQQIAALRRQLAALEAALDASEKrdrESQAKIADL 177
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
873-1132 |
3.26e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 3.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 873 QELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDI 952
Cdd:COG4942 27 AELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEEL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 953 hdtvnmnidtQEQLRnALESLKQHQETINTLKSKISEEVSRNLHMeentgetkdeFQQKTienqEELRLLGDELKKQQEI 1032
Cdd:COG4942 107 ----------AELLR-ALYRLGRQPPLALLLSPEDFLDAVRRLQY----------LKYLA----PARREQAEELRADLAE 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1033 VAQEKnhaikkegelsrtcdrlAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETE 1112
Cdd:COG4942 162 LAALR-----------------AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEE 224
|
250 260
....*....|....*....|
gi 2462594594 1113 RLELAQKLNENYEEVKSITK 1132
Cdd:COG4942 225 LEALIARLEAEAAAAAERTP 244
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1775-1928 |
3.30e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 42.84 E-value: 3.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1775 QKKVSEMEQLKKQIKDQSltlsKLEIEN------LNLAQKLHENLEEMKSVMKERDN-LRRVEETLKLERDQLKESLQET 1847
Cdd:PRK12704 30 EAKIKEAEEEAKRILEEA----KKEAEAikkealLEAKEEIHKLRNEFEKELRERRNeLQKLEKRLLQKEENLDRKLELL 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1848 KARDLEIQQELKTARMLSKE---HKETVDKLREKISEKTIQISDIQKD------LDKSKDELQKKIQELQKKELQllRVK 1918
Cdd:PRK12704 106 EKREEELEKKEKELEQKQQElekKEEELEELIEEQLQELERISGLTAEeakeilLEKVEEEARHEAAVLIKEIEE--EAK 183
|
170
....*....|
gi 2462594594 1919 EDVNMSHKKI 1928
Cdd:PRK12704 184 EEADKKAKEI 193
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
653-902 |
3.85e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 3.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 653 EKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDgkvpkdllcnlELEGKITDLQKELNKE 732
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIR-----------ALEQELAALEAELAEL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 733 VEENEALREEvilLSELKSLPSEVERLRKEIQDKSEELHIITSEKdklFSEVVHKESRVQGLLEEIGKTKDDLATTQSNY 812
Cdd:COG4942 89 EKEIAELRAE---LEAQKEELAELLRALYRLGRQPPLALLLSPED---FLDAVRRLQYLKYLAPARREQAEELRADLAEL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 813 KSTDQEFQNFKtlhmdfeQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQL 892
Cdd:COG4942 163 AALRAELEAER-------AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
250
....*....|
gi 2462594594 893 KEQLENRDST 902
Cdd:COG4942 236 AAAAAERTPA 245
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
759-1044 |
4.14e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 42.20 E-value: 4.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 759 LRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLE 838
Cdd:COG4372 29 LSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 839 ENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTL-ITEKL 917
Cdd:COG4372 109 EAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEqALDEL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 918 QQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKIS-----EEVS 992
Cdd:COG4372 189 LKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEieeleLAIL 268
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 2462594594 993 RNLHMEENTGETKDEFQQKTIENQEELRLLGDELKKQQEIVAQEKNHAIKKE 1044
Cdd:COG4372 269 VEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAA 320
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
493-702 |
4.54e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.12 E-value: 4.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 493 QENIESELNSLRADYDNLVLDYEQLRTEKEEMELKLKEKNdlDEFEALERKTKKDQEmqliheisNLKNLVKHAevYNQD 572
Cdd:COG3883 32 LEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQ--AEIAEAEAEIEERRE--------ELGERARAL--YRSG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 573 lenELSSKVELLREKEDqikkLQEYIDsqKLENIKMDLSYSLESIEDPKQMKQTLFDAETVALDAKREsafLRSENLELK 652
Cdd:COG3883 100 ---GSVSYLDVLLGSES----FSDFLD--RLSALSKIADADADLLEELKADKAELEAKKAELEAKLAE---LEALKAELE 167
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 2462594594 653 EKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTS 702
Cdd:COG3883 168 AAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAA 217
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
828-948 |
4.57e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.64 E-value: 4.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 828 DFEQKYKMVLEEN-------ERMNQEIVNLSKEAqkfdSSLGALKTELSYKTQELQEKTREVQERLNE-------MEQLK 893
Cdd:PRK04863 541 EFCKRLGKNLDDEdeleqlqEELEARLESLSESV----SEARERRMALRQQLEQLQARIQRLAARAPAwlaaqdaLARLR 616
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 2462594594 894 EQLENRDSTLQTVerektliTEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQL 948
Cdd:PRK04863 617 EQSGEEFEDSQDV-------TEYMQQLLERERELTVERDELAARKQALDEEIERL 664
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
313-941 |
4.96e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 42.58 E-value: 4.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 313 FDETLTALQFASTAKYMKN-----TPYVNEVSTDEALLKRYRKEIMDLKKQLEEVsletraQAMEKDQLAQLLEEKDLLQ 387
Cdd:PRK01156 155 LDEILEINSLERNYDKLKDvidmlRAEISNIDYLEEKLKSSNLELENIKKQIADD------EKSHSITLKEIERLSIEYN 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 388 KVQNEKI---ENLTRMLVTSSSLTLQQELKAKRKRRVTWCLGKINKMKNSnyadqfniptnitTKTHKLSINLLREIDES 464
Cdd:PRK01156 229 NAMDDYNnlkSALNELSSLEDMKNRYESEIKTAESDLSMELEKNNYYKEL-------------EERHMKIINDPVYKNRN 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 465 VCSESDVFSNTLDTLSEIewnpatkllnQENIESELNSlradYDNLVLDYEQLRTEKEEMELKLKEKNDLDEfEALERKT 544
Cdd:PRK01156 296 YINDYFKYKNDIENKKQI----------LSNIDAEINK----YHAIIKKLSVLQKDYNDYIKKKSRYDDLNN-QILELEG 360
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 545 KKDQEMQLIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSqKLENIKMDLSYSLESIEDPKQMK 624
Cdd:PRK01156 361 YEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINV-KLQDISSKVSSLNQRIRALRENL 439
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 625 QTLfdAETVALDAKRESAFLRSENLElKEKMKELATTYKQMENDIQlyqsqlEAKKKMQVDLEKELQSAFNEITKLTSLI 704
Cdd:PRK01156 440 DEL--SRNMEMLNGQSVCPVCGTTLG-EEKSNHIINHYNEKKSRLE------EKIREIEIEVKDIDEKIVDLKKRKEYLE 510
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 705 DGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKE------IQDKSEELHIITSEKD 778
Cdd:PRK01156 511 SEEINKSINEYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTswlnalAVISLIDIETNRSRSN 590
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 779 KLFSEVVHKESRVQGLLEEIgktKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVleenERMNQEIVNLSKEAQKFD 858
Cdd:PRK01156 591 EIKKQLNDLESRLQEIEIGF---PDDKSYIDKSIREIENEANNLNNKYNEIQENKILI----EKLRGKIDNYKKQIAEID 663
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 859 SSLGALKtELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQ 938
Cdd:PRK01156 664 SIIPDLK-EITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDINETLESMKKIKKAIGDLKRLR 742
|
...
gi 2462594594 939 ESL 941
Cdd:PRK01156 743 EAF 745
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1259-1541 |
5.73e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.92 E-value: 5.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1259 EMERLrLNEKFQESQEEIKSLTKERDNlktIKEALEVKHDQLKEhiretlakiQESQSKQeqslNMKEKDNETTKIVSEM 1338
Cdd:PHA02562 167 EMDKL-NKDKIRELNQQIQTLDMKIDH---IQQQIKTYNKNIEE---------QRKKNGE----NIARKQNKYDELVEEA 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1339 EQFKPkdsallriEIEMLglskrlqesHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIvAKHLETEEELKVAHCCL 1418
Cdd:PHA02562 230 KTIKA--------EIEEL---------TDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQF-QKVIKMYEKGGVCPTCT 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1419 KEQEETINELrvnlSEKETEISTIQKQLEAINDKlqnkIQEIYEKEEQFNiKQISEVQEKVNELKQFKEHRKAKDSALQS 1498
Cdd:PHA02562 292 QQISEGPDRI----TKIKDKLKELQHSLEKLDTA----IDELEEIMDEFN-EQSKKLLELKNKISTNKQSLITLVDKAKK 362
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 2462594594 1499 IESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQL 1541
Cdd:PHA02562 363 VKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKEKYHR 405
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
556-931 |
5.90e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.03 E-value: 5.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 556 ISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSQKLE------NIKMDLSYSLESIEDPKQMKQTLFD 629
Cdd:pfam17380 271 LNQLLHIVQHQKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEeaekarQAEMDRQAAIYAEQERMAMEREREL 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 630 AETVALDAKRESAFLRSENLELK-EKMKELATTYKQMENDIQLYQSQLEAKKKMQVdLEKELQSafneitkltslidgkv 708
Cdd:pfam17380 351 ERIRQEERKRELERIRQEEIAMEiSRMRELERLQMERQQKNERVRQELEAARKVKI-LEEERQR---------------- 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 709 pkdllcnlelegKITDLQKELNK-EVEENEALREEVILLSELKSlpSEVERLRKEIQDKSEELHII--TSEKDKLFSEVV 785
Cdd:pfam17380 414 ------------KIQQQKVEMEQiRAEQEEARQREVRRLEEERA--REMERVRLEEQERQQQVERLrqQEEERKRKKLEL 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 786 HKESRVQGLLEEIgktkddlattqsNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVnlskeaqkfdsslgalK 865
Cdd:pfam17380 480 EKEKRDRKRAEEQ------------RRKILEKELEERKQAMIEEERKRKLLEKEMEERQKAIY----------------E 531
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462594594 866 TELSYKTQELQEKTREVQERLNEMEQLKEQLENRdSTLQTVEREKTLI-----TEKLQQTLEEVKTLTQEK 931
Cdd:pfam17380 532 EERRREAEEERRKQQEMEERRRIQEQMRKATEER-SRLEAMEREREMMrqiveSEKARAEYEATTPITTIK 601
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
515-984 |
6.24e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.05 E-value: 6.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 515 EQLRTEKEEMELKLKEKNDLDEFEALERKtKKDQEMQLIHEISNLKNLVKHAEVYNQDlenELSSKVELlrEKEDQIKKL 594
Cdd:PTZ00121 1493 EEAKKKADEAKKAAEAKKKADEAKKAEEA-KKADEAKKAEEAKKADEAKKAEEKKKAD---ELKKAEEL--KKAEEKKKA 1566
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 595 QEYIDSQKLENIKMDLSYSLESIEDPKQMKQTLFDAETVALDA----KRESAFLRSENLELKEKMKELATTYKQMENDIQ 670
Cdd:PTZ00121 1567 EEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAeeakKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEK 1646
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 671 LYQSQL-EAKKKMQVDLEKELQSAFNEITKLTSLI-----DGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEVi 744
Cdd:PTZ00121 1647 KKAEELkKAEEENKIKAAEEAKKAEEDKKKAEEAKkaeedEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAE- 1725
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 745 llSELKSLPSEVERLRKEIQDKSEELHIITSEKDKlfseVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKT 824
Cdd:PTZ00121 1726 --EENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKK----IAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKK 1799
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 825 LHMDFEQkyKMVLEENERMNQEIVNLSKEAqkFDSSlgalktelsykTQELQEKTREVQERLNEMEQLKEQLENRDSTLQ 904
Cdd:PTZ00121 1800 IKDIFDN--FANIIEGGKEGNLVINDSKEM--EDSA-----------IKEVADSKNMQLEEADAFEKHKFNKNNENGEDG 1864
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 905 TVEREKTLITEKLQQTLEEVktltQEKDDLKQLQES---LQIERDQLKSDIHDTVNMNIDTQEQLRNALEslKQHQETIN 981
Cdd:PTZ00121 1865 NKEADFNKEKDLKEDDEEEI----EEADEIEKIDKDdieREIPNNNMAGKNNDIIDDKLDKDEYIKRDAE--ETREEIIK 1938
|
...
gi 2462594594 982 TLK 984
Cdd:PTZ00121 1939 ISK 1941
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
1386-1703 |
6.69e-03 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 41.76 E-value: 6.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1386 LQSESDQLKENIKEivAKHLETE-EELKVAHCCLKEQEETINE---------LRVNLSEKETEISTIQKQLEAINDKLQN 1455
Cdd:PLN03229 434 LEGEVEKLKEQILK--AKESSSKpSELALNEMIEKLKKEIDLEyteaviamgLQERLENLREEFSKANSQDQLMHPVLME 511
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1456 KIQEIyekEEQFNiKQISE------VQEKVNELKQFKEHRKAKDSALQSIESKmLELTNRLQESQEEIQImikeKEEMKR 1529
Cdd:PLN03229 512 KIEKL---KDEFN-KRLSRapnylsLKYKLDMLNEFSRAKALSEKKSKAEKLK-AEINKKFKEVMDRPEI----KEKMEA 582
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1530 VQEALQIER----DQLKENTKEIVAKMKESQEKEY---------QFLKMTAVNETQEKMCEIEHLKEQFEtqKLNLE-NI 1595
Cdd:PLN03229 583 LKAEVASSGassgDELDDDLKEKVEKMKKEIELELagvlksmglEVIGVTKKNKDTAEQTPPPNLQEKIE--SLNEEiNK 660
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1596 ETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERdqLKENLRETITRDLEKQEelkivhmhLKEHQETIDKlrgi 1675
Cdd:PLN03229 661 KIERVIRSSDLKSKIELLKLEVAKASKTPDVTEKEKIEA--LEQQIKQKIAEALNSSE--------LKEKFEELEA---- 726
|
330 340
....*....|....*....|....*...
gi 2462594594 1676 vsektnEISNMQKDLEHSNDALKAQDLK 1703
Cdd:PLN03229 727 ------ELAAARETAAESNGSLKNDDDK 748
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
1719-1869 |
6.95e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 41.74 E-value: 6.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1719 QETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQikdqsltlskl 1798
Cdd:PRK00409 501 ENIIEEAKKLIGEDKEKLNELIASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLE----------- 569
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462594594 1799 eienlNLAQKLHENLEEMKSVmkerdnlrrVEETLKLERDQLKESLQETKARDL-EIQQELKTARMLSKEHK 1869
Cdd:PRK00409 570 -----EAEKEAQQAIKEAKKE---------ADEIIKELRQLQKGGYASVKAHELiEARKRLNKANEKKEKKK 627
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1844-2000 |
7.27e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.68 E-value: 7.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1844 LQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKedvnm 1923
Cdd:COG1579 12 LQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVR----- 86
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462594594 1924 shkKINEMEQLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIRIVAKERDELRRIKESLKMERDQFIATLREMIAR 2000
Cdd:COG1579 87 ---NNKEYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEE 160
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
1611-1885 |
7.73e-03 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 41.05 E-value: 7.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1611 EEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDL 1690
Cdd:COG1340 8 SSLEELEEKIEELREEIEELKEKRDELNEELKELAEKRDELNAQVKELREEAQELREKRDELNEKVKELKEERDELNEKL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1691 EHSNDALKAQDlKIQEELRIAHMHLKEQQETIDKLrgivsEKTDKLSNMQKDLENsnaKLQEKIQELKanehQLITLKKD 1770
Cdd:COG1340 88 NELREELDELR-KELAELNKAGGSIDKLRKEIERL-----EWRQQTEVLSPEEEK---ELVEKIKELE----KELEKAKK 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1771 VNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHEnleEMKSVMKERDNLRRVEETLKLERDQLKESLQETKAR 1850
Cdd:COG1340 155 ALEKNEKLKELRAELKELRKEAEEIHKKIKELAEEAQELHE---EMIELYKEADELRKEADELHKEIVEAQEKADELHEE 231
|
250 260 270
....*....|....*....|....*....|....*
gi 2462594594 1851 DLEIQQELKTARMLSKEHKETVDKLREKISEKTIQ 1885
Cdd:COG1340 232 IIELQKELRELRKELKKLRKKQRALKREKEKEELE 266
|
|
| ATG17_like |
pfam04108 |
Autophagy protein ATG17-like domain; This domain is found in the autophagy-related proteins ... |
1277-1485 |
8.19e-03 |
|
Autophagy protein ATG17-like domain; This domain is found in the autophagy-related proteins ATG17 and ATG11, conserved across eukaryotes. ATG17 forms a complex with ATG29 and ATG31, critical for both PAS (preautophagosomal structure) formation and autophagy. Together with ATG13, it is required for ATG1 kinase activation. ATG11 is a scaffold protein required for the cytoplasm-to-vacuole targeting (Cvt) pathway during starvation and to recruit ATG proteins to the pre-autophagosome. It is also required for ATG1 kinase activation. In many eukaryotes, ATG11 (the orthologue in mammals is RB1-inducible coiled-coil protein 1 (RB1CC1) and in S. pombe is Taz1-interacting factor 1 (taf1)) is essential for bulk autophagy, except in S.cerevisiae. ATG17 and ATG11 are large similar proteins, both predicted to be almost entirely helical, containing conserved coiled-coil regions and lack obvious functional motifs.
Pssm-ID: 427715 [Multi-domain] Cd Length: 360 Bit Score: 41.22 E-value: 8.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1277 KSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQfkpkdsallrIEIEML 1356
Cdd:pfam04108 112 DSVEILRDALKELIDELQAAQESLDSDLKRFDDDLRDLQKELESLSSPSESISLIPTLLKELES----------LEEEMA 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1357 GLSKRLQESHDE-MKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSek 1435
Cdd:pfam04108 182 SLLESLTNHYDQcVTAVKLTEGGRAEMLEVLENDARELDDVVPELQDRLDEMENNYERLQKLLEQKNSLIDELLSALQ-- 259
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1436 etEISTIQKQLEAINDKLQnKIQEIYEKEEQFNIKQISEVQEKVNELKQF 1485
Cdd:pfam04108 260 --LIAEIQSRLPEYLAALK-EFEERWEEEKETIEDYLSELEDLREFYEGF 306
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
837-948 |
8.38e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.86 E-value: 8.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 837 LEENERMNQEIVNLSKE-----AQKFDSS--LGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVE-- 907
Cdd:COG3096 524 LEQRLRQQQNAERLLEEfcqriGQQLDAAeeLEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARApa 603
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 908 -----------REKT--------LITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQL 948
Cdd:COG3096 604 wlaaqdalerlREQSgealadsqEVTAAMQQLLEREREATVERDELAARKQALESQIERL 663
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
737-1294 |
8.45e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.82 E-value: 8.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 737 EALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVhkESRVQGLLEEIGKTKDDLATTQSNYKSTD 816
Cdd:COG4913 245 EDAREQIELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELL--EAELEELRAELARLEAELERLEARLDALR 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 817 QEFQNFKTLHMDFEQKYKMVLE-ENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEME----- 890
Cdd:COG4913 323 EELDELEAQIRGNGGDRLEQLErEIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEeelea 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 891 -------------QLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKT-LTQEKDDLKQLQESLQIERDQLK------- 949
Cdd:COG4913 403 leealaeaeaalrDLRRELRELEAEIASLERRKSNIPARLLALRDALAEaLGLDEAELPFVGELIEVRPEEERwrgaier 482
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 950 -------------------SDIHDTVNM--NIDTQEqLRNALESLKQHQETINTLKSKIS-----------EEVSR--NL 995
Cdd:COG4913 483 vlggfaltllvppehyaaaLRWVNRLHLrgRLVYER-VRTGLPDPERPRLDPDSLAGKLDfkphpfrawleAELGRrfDY 561
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 996 HMEENTGETKDEFQQKTIENQ----EELRLLGDELKKQQEIV----AQEKNHAIKKE-GELSRTCDRLAEVEEKLKEKSQ 1066
Cdd:COG4913 562 VCVDSPEELRRHPRAITRAGQvkgnGTRHEKDDRRRIRSRYVlgfdNRAKLAALEAElAELEEELAEAEERLEALEAELD 641
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1067 QLQEKQQQLLNVQE------EMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKEL 1140
Cdd:COG4913 642 ALQERREALQRLAEyswdeiDVASAEREIAELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKE 721
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1141 QKSFETERDHLRGYIREIEATGLQTKEEL---KIAHIHLKEHQETIDE-LRRSVSEKTAQIINT-QDLEKSHTKLQEEIP 1215
Cdd:COG4913 722 LEQAEEELDELQDRLEAAEDLARLELRALleeRFAAALGDAVERELREnLEERIDALRARLNRAeEELERAMRAFNREWP 801
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1216 VlhEEQELLPNVKEVSETQETMNEL-------------ELLTEQSTTkdsttlariemERLRLNEKFQESQEEIksltke 1282
Cdd:COG4913 802 A--ETADLDADLESLPEYLALLDRLeedglpeyeerfkELLNENSIE-----------FVADLLSKLRRAIREI------ 862
|
650
....*....|..
gi 2462594594 1283 RDNLKTIKEALE 1294
Cdd:COG4913 863 KERIDPLNDSLK 874
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1258-1475 |
9.06e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.45 E-value: 9.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1258 IEMERLR-LNEKFQESQEEIKSLTKERDNLKTIKEALEV----KHDQLKEHIRETLAKIQESQSKQEQSLNmkEKDNETT 1332
Cdd:PRK05771 40 LSNERLRkLRSLLTKLSEALDKLRSYLPKLNPLREEKKKvsvkSLEELIKDVEEELEKIEKEIKELEEEIS--ELENEIK 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1333 KIVSEMEQFKP-KDsalLRIEIEMLGLSKRLQ--------------ESHDEMKSVAKEKDDLQRLQEVLQSESDQLKEnI 1397
Cdd:PRK05771 118 ELEQEIERLEPwGN---FDLDLSLLLGFKYVSvfvgtvpedkleelKLESDVENVEYISTDKGYVYVVVVVLKELSDE-V 193
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462594594 1398 KEIVAKHLETEEELKVahccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEqfNIKQISEV 1475
Cdd:PRK05771 194 EEELKKLGFERLELEE----EGTPSELIREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLE--IELERAEA 265
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1433-1558 |
9.10e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 41.30 E-value: 9.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1433 SEKETEISTIQKQLEAiNDKLQNKIQEIyekEEQFNIKQiSEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQE 1512
Cdd:PRK12704 47 AKKEAEAIKKEALLEA-KEEIHKLRNEF---EKELRERR-NELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQ 121
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1513 SQEEIQIMIKEKEEMKRVQ-------------EALQIERDQLKENTK-EIVAKMKESQEK 1558
Cdd:PRK12704 122 KQQELEKKEEELEELIEEQlqelerisgltaeEAKEILLEKVEEEARhEAAVLIKEIEEE 181
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1808-2041 |
9.22e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.15 E-value: 9.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1808 KLHENLEEMKSVMKERDNlrrVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQIS 1887
Cdd:PHA02562 175 KIRELNQQIQTLDMKIDH---IQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1888 DIQKDLDKSKDELQKKIQELQkkelqllRVKEDVNMsHKKINEMEQLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIR 1967
Cdd:PHA02562 252 DPSAALNKLNTAAAKIKSKIE-------QFQKVIKM-YEKGGVCPTCTQQISEGPDRITKIKDKLKELQHSLEKLDTAID 323
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462594594 1968 IVAKERDELRRIKESLKMERDQFIATLREMIARDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKRYSE 2041
Cdd:PHA02562 324 ELEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSE 397
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
878-1214 |
9.98e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.16 E-value: 9.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 878 KTREVQERLNEMEQLKEQLENRDSTLQTVEREKTL--ITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQlKSDIhdt 955
Cdd:COG3206 62 EPQSSDVLLSGLSSLSASDSPLETQIEILKSRPVLerVVDKLNLDEDPLGEEASREAAIERLRKNLTVEPVK-GSNV--- 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 956 VNMNIDTQEQLRNAleslkqhqetintlksKISEEVSRNLhMEENTGETKDEFQQKTIENQEELRLLGDELKKQQEIVA- 1034
Cdd:COG3206 138 IEISYTSPDPELAA----------------AVANALAEAY-LEQNLELRREEARKALEFLEEQLPELRKELEEAEAALEe 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1035 -QEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIEN--LKNELKNKELTLehmET 1111
Cdd:COG3206 201 fRQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQspVIQQLRAQLAEL---EA 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462594594 1112 ERLELAQKLNENYEEVKSITKERKVLKELQKsfeterdhlrgyiREIEATGLQTKEELKIAhihlkehQETIDELRRSVS 1191
Cdd:COG3206 278 ELAELSARYTPNHPDVIALRAQIAALRAQLQ-------------QEAQRILASLEAELEAL-------QAREASLQAQLA 337
|
330 340
....*....|....*....|...
gi 2462594594 1192 EKTAQIINTQDLEKSHTKLQEEI 1214
Cdd:COG3206 338 QLEARLAELPELEAELRRLEREV 360
|
|
| |
