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Conserved domains on  [gi|2462606136|ref|XP_054210281|]
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CD109 antigen isoform X2 [Homo sapiens]

Protein Classification

alpha-2-macroglobulin-like protein( domain architecture ID 13392303)

alpha-2-macroglobulin-like protein may function as a proteinase inhibitor via a trapping mechanism. A peptide stretch serves as the bait region and contains cleavage sites for various proteinases; as soon as a proteinase cleaves the bait region, a conformational change traps the proteinase and significantly reduces its activity against high molecular weight substrates

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
A2M_2 cd02897
Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy ...
667-954 7.52e-152

Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy zone protein (PZP). Alpha(2)-M and PZP are broadly specific proteinase inhibitors. Alpha (2)-M is a major carrier protein in serum. The structural thioester of alpha (2)-M, is involved in the immobilization and entrapment of proteases. PZP is a trace protein in the plasma of non-pregnant females and males which is elevated in pregnancy. Alpha (2)-M and PZ bind to placental protein-14 and may modulate its activity in T-cell growth and cytokine production contributing to fetal survival. It has been suggested that thioester bond cleavage promotes the binding of PZ and alpha (2)-M to the CD91 receptor clearing them from circulation.


:

Pssm-ID: 239227  Cd Length: 292  Bit Score: 456.65  E-value: 7.52e-152
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  667 SINGLASLIRMPYGCGEQNMINFAPNIYILDYLTKKKQLTDNLKEKALSFMRQGYQRELLYQREDGSFSAFGNYDPSGST 746
Cdd:cd02897      1 ALQNLDNLLRMPYGCGEQNMVNFAPNIYVLDYLKATGQLTPEIESKALGFLRTGYQRQLTYKHSDGSYSAFGESDKSGST 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  747 WLSAFVLRCFLEADPYIDIDQNVLHRTYTWLKGHQKSNGEFWDPGRVIHSELQGGNKSPVTLTAYIVTSLLGYRKYQPNI 826
Cdd:cd02897     81 WLTAFVLKSFAQARPFIYIDENVLQQALTWLSSHQKSNGCFREVGRVFHKAMQGGVDDEVALTAYVLIALLEAGLPSERP 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  827 DVQESIHFLESEFSrGISDNYTLALITYALSSVGSPKAKEALNMLTWRAEQEGGMQFWVS---SESKLSDSWQPRSLDIE 903
Cdd:cd02897    161 VVEKALSCLEAALD-SISDPYTLALAAYALTLAGSEKRPEALKKLDELAISEDGTKHWSRpppSEEGPSYYWQAPSAEVE 239
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2462606136  904 VAAYALLSHFLQ--FQTSEGIPIMRWLSRQRNSLGGFASTQDTTVALKALSEF 954
Cdd:cd02897    240 MTAYALLALLSAggEDLAEALPIVKWLAKQRNSLGGFSSTQDTVVALQALAKY 292
YfaS super family cl34462
Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function ...
6-1009 2.13e-38

Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function prediction only];


The actual alignment was detected with superfamily member COG2373:

Pssm-ID: 441940 [Multi-domain]  Cd Length: 1605  Bit Score: 157.16  E-value: 2.13e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136    6 LNGTITAKYTYGKPVKG---DVTLTFLPLSFwgkkknitkTFKinGSANFSFNDEEMKN---VMDSSNG----------- 68
Cdd:COG2373    489 VTVTVDARYLFGAPAAGlkvEGEVTLRPART---------AFP--GYPGYRFGDPDEEFepeELDLGEGtldadgkasls 557
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136   69 --LSEYLDLSSPGPVEILTTVTESvTG--ISRNVSTNVFFKQHdYI-IEFFDYTTVLKPSlNFTATVKVTRADGNQLTle 143
Cdd:COG2373    558 lpLPDAPDAPGPLRATVEASVFES-GGrpVTRSATVPVHPADF-YVgIRLPLFDGDPEGA-PATFEVVAVDPDGKPVA-- 632
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  144 erRNNVVITVTQRNYTEYWSGSNSGNQKMEAVQK------------------INYTVPQSGTFKIEfpiLEDSSELQL-- 203
Cdd:COG2373    633 --GKGLKVELYREEWRYVWYKSDDGGWRYESQEKeepvaegtlttgadgpasLSLTPVEWGRYRLE---VKDPDGGLAts 707
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  204 KAYFLGSKSSmavhslFKSPSKTYIQLKTRDENIKVG--------SPFE----LVVSGNKRLKElsymvvsrgQLVAVGK 271
Cdd:COG2373    708 VRFYAGGNAS------WGAERPDRLELSLDKESYKPGetaklliqSPFAgralVTVERDGVLET---------QWVDVKG 772
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  272 qNSTMFSLTPENSWTPKACVIVYYI--EDDGEIISD-----VLKIPVQLV-FKNKIKLywsKV--KAEPSEKVSLRISVT 341
Cdd:COG2373    773 -GGTTVEIPVTEDWAPNAYVSATLVrpGDSTANDMParaygVAPLPVDPPaRRLKVEL---TApeKLRPGETLTVTVKVK 848
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  342 QPD---SIVGIVAVDKSV-NLMNasnditmenvvhelelYNT----GYYlgmfmnsfavFQECGLWVLTDANLtkDYIDG 413
Cdd:COG2373    849 GAAgkaAEVTLAAVDEGIlNLTG----------------YKTpdplDFF----------YGKRALGVETRDLY--GRLIG 900
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  414 VYDNAEYAERF---MEENEGhivdihdfslGSSPHVRKHFPETWIW---LDTNMGSRIyqEFEVTVPDSITSWVATGFVI 487
Cdd:COG2373    901 AFGGAAGALRSggdGALGRG----------GNPKPPRKRFKPVALFsgpVKTDADGKA--TVSFDLPDFNGTLRVMAVAW 968
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  488 SED-LGLGLTTTPVElqafQPFFIFLNLPYSVIRGEEFALEITIFNYLKDATEVKVIIEKSDKFDILMTSSeinatghqQ 566
Cdd:COG2373    969 SDDrFGSAEATVTVR----KPLVVRPSLPRFLAPGDRFELPVDVFNLTGKAGTVTVTLEASGGLTLEGEAT--------Q 1036
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  567 TLLVPSEDGATVLFPIRPTHLGEIPITVTALSPTASDAITQMILVKAEGIEKSYSQSILLDltdnrlQSTLKTLSFSFPP 646
Cdd:COG2373   1037 TVTLAAGGRATVRFPLKAPDAGDAKVTVTATGGGESDAREVELPVRPANPLVTRATSGVLA------PGESWTLPLDLPG 1110
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  647 NTVTGSERVQI----TAIGDVLGpsinGLASLIRMPYGCGEQNMINFAPNIYILDyLTKKKQLTDNLKEKALSFMRQGYQ 722
Cdd:COG2373   1111 GLRPGTGSLTLslssSPPLDLAG----LLRYLLRYPYGCTEQTTSRALPLLYLSD-LAEALGLKGDKDAELRARIQAAIA 1185
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  723 RELLYQREDGSFSAFGNYDPSgSTWLSAFVLRCFLEADPY-IDIDQNVLHRTYTWLKGHQKSNGEFwdpgrvihsELQGG 801
Cdd:COG2373   1186 RLLSMQNSDGGFGLWPGGSES-DPWLTAYATDFLLEAREAgYAVPDDALDRALDYLRNYLRNPWEI---------EYDDA 1255
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  802 NKSPVTLTAYIVTSLLGyrkyQPNIDVQESIHFLESEFsrgiSDNYTLALITYALSSVG-SPKAKEALNMLtWRAEQEGG 880
Cdd:COG2373   1256 YRLAVRAYALYVLARAG----KADLGDLRYLYDRRKDA----LSPLAKAQLAAALALLGdKARAEELLAAA-LARLRETG 1326
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  881 M--QFWVSSESKLSDswqpRSLdievAAYALLSHFLQFQTSEgiPIMRWLSRQRNSlGGFASTQDTTVALKALSEFAAlM 958
Cdd:COG2373   1327 ArdYWYGDYGSPLRD----QAL----ALALLAELGPDAPLAP--KLARWLAKALKS-GRWLSTQETAWALLALAAYAR-A 1394
                         1050      1060      1070      1080      1090
                   ....*....|....*....|....*....|....*....|....*....|.
gi 2462606136  959 NTERTNIQVTVTGPSSPSPVkfliDTHNRLLLQTAELAVVQPTAVNISANG 1009
Cdd:COG2373   1395 AGASPDFTATLTLDGKTLPL----TGRGPLARVTLPAAELLAGPLTITNTG 1441
A2M_recep pfam07677
A-macroglobulin receptor binding domain; This family includes the receptor binding domain ...
1069-1156 3.56e-27

A-macroglobulin receptor binding domain; This family includes the receptor binding domain region of the alpha-2-macroglobulin family.


:

Pssm-ID: 462226  Cd Length: 92  Bit Score: 106.11  E-value: 3.56e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136 1069 GRSGMALMEVNLLSGFMVPSEAISL---SETVKKVE-YDHGKLNLYLDSVNETQFCVNIPAVRNFKVSNTQDASVSIVDY 1144
Cdd:pfam07677    1 ESSNMAILEVGLPSGFVPDEEDLKKlgvDPLIKRVEtVDDGKVILYLDKLSGEPLCFSFRAEQTFPVANLKPAPVKVYDY 80
                           90
                   ....*....|..
gi 2462606136 1145 YEPRRQAVRSYN 1156
Cdd:pfam07677   81 YEPERRATTFYS 92
 
Name Accession Description Interval E-value
A2M_2 cd02897
Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy ...
667-954 7.52e-152

Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy zone protein (PZP). Alpha(2)-M and PZP are broadly specific proteinase inhibitors. Alpha (2)-M is a major carrier protein in serum. The structural thioester of alpha (2)-M, is involved in the immobilization and entrapment of proteases. PZP is a trace protein in the plasma of non-pregnant females and males which is elevated in pregnancy. Alpha (2)-M and PZ bind to placental protein-14 and may modulate its activity in T-cell growth and cytokine production contributing to fetal survival. It has been suggested that thioester bond cleavage promotes the binding of PZ and alpha (2)-M to the CD91 receptor clearing them from circulation.


Pssm-ID: 239227  Cd Length: 292  Bit Score: 456.65  E-value: 7.52e-152
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  667 SINGLASLIRMPYGCGEQNMINFAPNIYILDYLTKKKQLTDNLKEKALSFMRQGYQRELLYQREDGSFSAFGNYDPSGST 746
Cdd:cd02897      1 ALQNLDNLLRMPYGCGEQNMVNFAPNIYVLDYLKATGQLTPEIESKALGFLRTGYQRQLTYKHSDGSYSAFGESDKSGST 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  747 WLSAFVLRCFLEADPYIDIDQNVLHRTYTWLKGHQKSNGEFWDPGRVIHSELQGGNKSPVTLTAYIVTSLLGYRKYQPNI 826
Cdd:cd02897     81 WLTAFVLKSFAQARPFIYIDENVLQQALTWLSSHQKSNGCFREVGRVFHKAMQGGVDDEVALTAYVLIALLEAGLPSERP 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  827 DVQESIHFLESEFSrGISDNYTLALITYALSSVGSPKAKEALNMLTWRAEQEGGMQFWVS---SESKLSDSWQPRSLDIE 903
Cdd:cd02897    161 VVEKALSCLEAALD-SISDPYTLALAAYALTLAGSEKRPEALKKLDELAISEDGTKHWSRpppSEEGPSYYWQAPSAEVE 239
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2462606136  904 VAAYALLSHFLQ--FQTSEGIPIMRWLSRQRNSLGGFASTQDTTVALKALSEF 954
Cdd:cd02897    240 MTAYALLALLSAggEDLAEALPIVKWLAKQRNSLGGFSSTQDTVVALQALAKY 292
TED_complement pfam07678
A-macroglobulin TED domain; This entry corresponds to the TED domain of the complement ...
657-954 1.66e-109

A-macroglobulin TED domain; This entry corresponds to the TED domain of the complement components such as C3, C4 and C5. This domain contains a short highly conserved region of proteinase-binding alpha-macro-globulins contains the cysteine and a glutamine of a thiol-ester bond that is cleaved at the moment of proteinase binding, and mediates the covalent binding of the alpha-macro-globulin to the proteinase. The GCGEQ motif is highly conserved.


Pssm-ID: 462227 [Multi-domain]  Cd Length: 311  Bit Score: 345.44  E-value: 1.66e-109
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  657 ITAIGDVLGPSI----NGLASLIRMPYGCGEQNMINFAPNIYILDYLTKKKQLTDNLKEKALSFMRQGYQRELLYQREDG 732
Cdd:pfam07678    1 ISVVGDIMGPAIqvvpENLSSLLRLPYGCGEQNMVLFAPNVYVLRYLDKTNQLTKLIKSKAIDYLEQGYQRQLSYKHPDG 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  733 SFSAFGNYDPsgSTWLSAFVLRCFLEADPYIDIDQNVLHRTYTWLKGHQKSNGEFWDPGRVIHSELQGGNKSPVTLTAYI 812
Cdd:pfam07678   81 SYSAFGHSPG--STWLTAFVLKVFAQARKFIFIDPEEICQSLRWLLSQQKPDGSFREPGPLLHRAMKGGVDGEVSLTAYV 158
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  813 VTSLLGYRKYQPNID-----VQESIHFLESEFSRGISDNYTLALITYALSSVGSPK-AKEALNMLTWRAEQEGGMQFW-- 884
Cdd:pfam07678  159 TIALLEALDINGLLQrvhpsIRKALTYLEQAQLAGLTSPYTLAILAYALALAGSPEtREELLKSLDAMAREEGNSRYWer 238
                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462606136  885 ---VSSESKLSDSWQPRSLDIEVAAYALLSHFLQFQTSEGIPIMRWLSRQRNSLGGFASTQDTTVALKALSEF 954
Cdd:pfam07678  239 dekSDPQGVPEYPPQAPSLEVETTAYALLAYLLLGDLTYADPIVKWLTSQRNSHGGFSSTQDTVVALQALAEY 311
YfaS COG2373
Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function ...
6-1009 2.13e-38

Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function prediction only];


Pssm-ID: 441940 [Multi-domain]  Cd Length: 1605  Bit Score: 157.16  E-value: 2.13e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136    6 LNGTITAKYTYGKPVKG---DVTLTFLPLSFwgkkknitkTFKinGSANFSFNDEEMKN---VMDSSNG----------- 68
Cdd:COG2373    489 VTVTVDARYLFGAPAAGlkvEGEVTLRPART---------AFP--GYPGYRFGDPDEEFepeELDLGEGtldadgkasls 557
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136   69 --LSEYLDLSSPGPVEILTTVTESvTG--ISRNVSTNVFFKQHdYI-IEFFDYTTVLKPSlNFTATVKVTRADGNQLTle 143
Cdd:COG2373    558 lpLPDAPDAPGPLRATVEASVFES-GGrpVTRSATVPVHPADF-YVgIRLPLFDGDPEGA-PATFEVVAVDPDGKPVA-- 632
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  144 erRNNVVITVTQRNYTEYWSGSNSGNQKMEAVQK------------------INYTVPQSGTFKIEfpiLEDSSELQL-- 203
Cdd:COG2373    633 --GKGLKVELYREEWRYVWYKSDDGGWRYESQEKeepvaegtlttgadgpasLSLTPVEWGRYRLE---VKDPDGGLAts 707
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  204 KAYFLGSKSSmavhslFKSPSKTYIQLKTRDENIKVG--------SPFE----LVVSGNKRLKElsymvvsrgQLVAVGK 271
Cdd:COG2373    708 VRFYAGGNAS------WGAERPDRLELSLDKESYKPGetaklliqSPFAgralVTVERDGVLET---------QWVDVKG 772
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  272 qNSTMFSLTPENSWTPKACVIVYYI--EDDGEIISD-----VLKIPVQLV-FKNKIKLywsKV--KAEPSEKVSLRISVT 341
Cdd:COG2373    773 -GGTTVEIPVTEDWAPNAYVSATLVrpGDSTANDMParaygVAPLPVDPPaRRLKVEL---TApeKLRPGETLTVTVKVK 848
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  342 QPD---SIVGIVAVDKSV-NLMNasnditmenvvhelelYNT----GYYlgmfmnsfavFQECGLWVLTDANLtkDYIDG 413
Cdd:COG2373    849 GAAgkaAEVTLAAVDEGIlNLTG----------------YKTpdplDFF----------YGKRALGVETRDLY--GRLIG 900
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  414 VYDNAEYAERF---MEENEGhivdihdfslGSSPHVRKHFPETWIW---LDTNMGSRIyqEFEVTVPDSITSWVATGFVI 487
Cdd:COG2373    901 AFGGAAGALRSggdGALGRG----------GNPKPPRKRFKPVALFsgpVKTDADGKA--TVSFDLPDFNGTLRVMAVAW 968
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  488 SED-LGLGLTTTPVElqafQPFFIFLNLPYSVIRGEEFALEITIFNYLKDATEVKVIIEKSDKFDILMTSSeinatghqQ 566
Cdd:COG2373    969 SDDrFGSAEATVTVR----KPLVVRPSLPRFLAPGDRFELPVDVFNLTGKAGTVTVTLEASGGLTLEGEAT--------Q 1036
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  567 TLLVPSEDGATVLFPIRPTHLGEIPITVTALSPTASDAITQMILVKAEGIEKSYSQSILLDltdnrlQSTLKTLSFSFPP 646
Cdd:COG2373   1037 TVTLAAGGRATVRFPLKAPDAGDAKVTVTATGGGESDAREVELPVRPANPLVTRATSGVLA------PGESWTLPLDLPG 1110
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  647 NTVTGSERVQI----TAIGDVLGpsinGLASLIRMPYGCGEQNMINFAPNIYILDyLTKKKQLTDNLKEKALSFMRQGYQ 722
Cdd:COG2373   1111 GLRPGTGSLTLslssSPPLDLAG----LLRYLLRYPYGCTEQTTSRALPLLYLSD-LAEALGLKGDKDAELRARIQAAIA 1185
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  723 RELLYQREDGSFSAFGNYDPSgSTWLSAFVLRCFLEADPY-IDIDQNVLHRTYTWLKGHQKSNGEFwdpgrvihsELQGG 801
Cdd:COG2373   1186 RLLSMQNSDGGFGLWPGGSES-DPWLTAYATDFLLEAREAgYAVPDDALDRALDYLRNYLRNPWEI---------EYDDA 1255
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  802 NKSPVTLTAYIVTSLLGyrkyQPNIDVQESIHFLESEFsrgiSDNYTLALITYALSSVG-SPKAKEALNMLtWRAEQEGG 880
Cdd:COG2373   1256 YRLAVRAYALYVLARAG----KADLGDLRYLYDRRKDA----LSPLAKAQLAAALALLGdKARAEELLAAA-LARLRETG 1326
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  881 M--QFWVSSESKLSDswqpRSLdievAAYALLSHFLQFQTSEgiPIMRWLSRQRNSlGGFASTQDTTVALKALSEFAAlM 958
Cdd:COG2373   1327 ArdYWYGDYGSPLRD----QAL----ALALLAELGPDAPLAP--KLARWLAKALKS-GRWLSTQETAWALLALAAYAR-A 1394
                         1050      1060      1070      1080      1090
                   ....*....|....*....|....*....|....*....|....*....|.
gi 2462606136  959 NTERTNIQVTVTGPSSPSPVkfliDTHNRLLLQTAELAVVQPTAVNISANG 1009
Cdd:COG2373   1395 AGASPDFTATLTLDGKTLPL----TGRGPLARVTLPAAELLAGPLTITNTG 1441
A2M pfam00207
Alpha-2-macroglobulin family; This family includes the C-terminal region of the ...
453-544 1.36e-35

Alpha-2-macroglobulin family; This family includes the C-terminal region of the alpha-2-macroglobulin family.


Pssm-ID: 459711 [Multi-domain]  Cd Length: 91  Bit Score: 130.01  E-value: 1.36e-35
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  453 TWIWLDTNMGSRIYQEFEVTVPDSITSWVATGFVISEDLGLGLTTtPVELQAFQPFFIFLNLPYSVIRGEEFALEITIFN 532
Cdd:pfam00207    1 TWLWDPVLVTDNGKASLSFTLPDSITTWRATAFALSPDTGLGVAE-PPELVVFKPFFVDLNLPYSVRRGEQFELKATVFN 79
                           90
                   ....*....|..
gi 2462606136  533 YLKDATEVKVII 544
Cdd:pfam00207   80 YLDKCLKVRVRL 91
A2M_recep pfam07677
A-macroglobulin receptor binding domain; This family includes the receptor binding domain ...
1069-1156 3.56e-27

A-macroglobulin receptor binding domain; This family includes the receptor binding domain region of the alpha-2-macroglobulin family.


Pssm-ID: 462226  Cd Length: 92  Bit Score: 106.11  E-value: 3.56e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136 1069 GRSGMALMEVNLLSGFMVPSEAISL---SETVKKVE-YDHGKLNLYLDSVNETQFCVNIPAVRNFKVSNTQDASVSIVDY 1144
Cdd:pfam07677    1 ESSNMAILEVGLPSGFVPDEEDLKKlgvDPLIKRVEtVDDGKVILYLDKLSGEPLCFSFRAEQTFPVANLKPAPVKVYDY 80
                           90
                   ....*....|..
gi 2462606136 1145 YEPRRQAVRSYN 1156
Cdd:pfam07677   81 YEPERRATTFYS 92
 
Name Accession Description Interval E-value
A2M_2 cd02897
Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy ...
667-954 7.52e-152

Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy zone protein (PZP). Alpha(2)-M and PZP are broadly specific proteinase inhibitors. Alpha (2)-M is a major carrier protein in serum. The structural thioester of alpha (2)-M, is involved in the immobilization and entrapment of proteases. PZP is a trace protein in the plasma of non-pregnant females and males which is elevated in pregnancy. Alpha (2)-M and PZ bind to placental protein-14 and may modulate its activity in T-cell growth and cytokine production contributing to fetal survival. It has been suggested that thioester bond cleavage promotes the binding of PZ and alpha (2)-M to the CD91 receptor clearing them from circulation.


Pssm-ID: 239227  Cd Length: 292  Bit Score: 456.65  E-value: 7.52e-152
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  667 SINGLASLIRMPYGCGEQNMINFAPNIYILDYLTKKKQLTDNLKEKALSFMRQGYQRELLYQREDGSFSAFGNYDPSGST 746
Cdd:cd02897      1 ALQNLDNLLRMPYGCGEQNMVNFAPNIYVLDYLKATGQLTPEIESKALGFLRTGYQRQLTYKHSDGSYSAFGESDKSGST 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  747 WLSAFVLRCFLEADPYIDIDQNVLHRTYTWLKGHQKSNGEFWDPGRVIHSELQGGNKSPVTLTAYIVTSLLGYRKYQPNI 826
Cdd:cd02897     81 WLTAFVLKSFAQARPFIYIDENVLQQALTWLSSHQKSNGCFREVGRVFHKAMQGGVDDEVALTAYVLIALLEAGLPSERP 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  827 DVQESIHFLESEFSrGISDNYTLALITYALSSVGSPKAKEALNMLTWRAEQEGGMQFWVS---SESKLSDSWQPRSLDIE 903
Cdd:cd02897    161 VVEKALSCLEAALD-SISDPYTLALAAYALTLAGSEKRPEALKKLDELAISEDGTKHWSRpppSEEGPSYYWQAPSAEVE 239
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2462606136  904 VAAYALLSHFLQ--FQTSEGIPIMRWLSRQRNSLGGFASTQDTTVALKALSEF 954
Cdd:cd02897    240 MTAYALLALLSAggEDLAEALPIVKWLAKQRNSLGGFSSTQDTVVALQALAKY 292
A2M_like cd02891
Proteins similar to alpha2-macroglobulin (alpha (2)-M). Alpha (2)-M is a major carrier ...
667-954 3.19e-110

Proteins similar to alpha2-macroglobulin (alpha (2)-M). Alpha (2)-M is a major carrier protein in serum. It is a broadly specific proteinase inhibitor. The structural thioester of alpha (2)-M, is involved in the immobilization and entrapment of proteases. This group contains another broadly specific proteinase inhibitor: pregnancy zone protein (PZP). PZP is a trace protein in the plasma of non-pregnant females and males which is elevated in pregnancy. Alpha (2)-M and PZ bind to placental protein-14 and may modulate its activity in T-cell growth and cytokine production thereby protecting the allogeneic fetus from attack by the maternal immune system. This group also contains C3, C4 and C5 of vertebrate complement. The vertebrate complement is an effector of both the acquired and innate immune systems The point of convergence of the classical, alternative and lectin pathways of the complement system is the proteolytic activation of C3. C4 plays a key role in propagating the classical and lectin pathways. C5 participates in the classical and alternative pathways. The thioester bond located within the structure of C3 and C4 is central to the function of complement. C5 does not contain an active thioester bond.


Pssm-ID: 239221 [Multi-domain]  Cd Length: 282  Bit Score: 346.30  E-value: 3.19e-110
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  667 SINGLASLIRMPYGCGEQNMINFAPNIYILDYLTKKKQLTDNLKEKALSFMRQGYQRELLYQREDGSFSAFGNYDPsGST 746
Cdd:cd02891      1 SLGNLDYLLRYPYGCGEQTMSRAAPNLYVLKYLDATGQLTPEIREKALEYIRKGYQRLLTYQRSDGSFSAWGNSDS-GST 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  747 WLSAFVLRCFLEADPYIDIDQNVLHRTYTWLKGHQKSNGEFWDPGRVIHSELQGGNKSPVTLTAYIVTSLLGYRKYQPNI 826
Cdd:cd02891     80 WLTAYVVKFLSQARKYIDVDENVLARALGWLVPQQKEDGSFRELGPVIHREMKGGVDDSVSLTAYVLIALAEAGKACDAS 159
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  827 dVQESIHFLESEFSrGISDNYTLALITYALSSVG-SPKAKEALNMLTWRAEQEGGMQFWVSSesklSDSWQPRSLDIEVA 905
Cdd:cd02891    160 -IEKALAYLETQLD-GLLDPYALAILAYALALAGdSTRADEALKKLLEAAREKGGTAHWSLS----WPGDYGSSLRVEAT 233
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*....
gi 2462606136  906 AYALLSHFLQFQTSEGIPIMRWLSRQRNSLGGFASTQDTTVALKALSEF 954
Cdd:cd02891    234 AYALLALLKLGDLEEAGPIAKWLAQQRNSGGGFLSTQDTVVALQALAAY 282
TED_complement pfam07678
A-macroglobulin TED domain; This entry corresponds to the TED domain of the complement ...
657-954 1.66e-109

A-macroglobulin TED domain; This entry corresponds to the TED domain of the complement components such as C3, C4 and C5. This domain contains a short highly conserved region of proteinase-binding alpha-macro-globulins contains the cysteine and a glutamine of a thiol-ester bond that is cleaved at the moment of proteinase binding, and mediates the covalent binding of the alpha-macro-globulin to the proteinase. The GCGEQ motif is highly conserved.


Pssm-ID: 462227 [Multi-domain]  Cd Length: 311  Bit Score: 345.44  E-value: 1.66e-109
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  657 ITAIGDVLGPSI----NGLASLIRMPYGCGEQNMINFAPNIYILDYLTKKKQLTDNLKEKALSFMRQGYQRELLYQREDG 732
Cdd:pfam07678    1 ISVVGDIMGPAIqvvpENLSSLLRLPYGCGEQNMVLFAPNVYVLRYLDKTNQLTKLIKSKAIDYLEQGYQRQLSYKHPDG 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  733 SFSAFGNYDPsgSTWLSAFVLRCFLEADPYIDIDQNVLHRTYTWLKGHQKSNGEFWDPGRVIHSELQGGNKSPVTLTAYI 812
Cdd:pfam07678   81 SYSAFGHSPG--STWLTAFVLKVFAQARKFIFIDPEEICQSLRWLLSQQKPDGSFREPGPLLHRAMKGGVDGEVSLTAYV 158
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  813 VTSLLGYRKYQPNID-----VQESIHFLESEFSRGISDNYTLALITYALSSVGSPK-AKEALNMLTWRAEQEGGMQFW-- 884
Cdd:pfam07678  159 TIALLEALDINGLLQrvhpsIRKALTYLEQAQLAGLTSPYTLAILAYALALAGSPEtREELLKSLDAMAREEGNSRYWer 238
                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462606136  885 ---VSSESKLSDSWQPRSLDIEVAAYALLSHFLQFQTSEGIPIMRWLSRQRNSLGGFASTQDTTVALKALSEF 954
Cdd:pfam07678  239 dekSDPQGVPEYPPQAPSLEVETTAYALLAYLLLGDLTYADPIVKWLTSQRNSHGGFSSTQDTVVALQALAEY 311
complement_C3_C4_C5 cd02896
Proteins similar to C3, C4 and C5 of vertebrate complement. The vertebrate complement system, ...
667-954 1.19e-85

Proteins similar to C3, C4 and C5 of vertebrate complement. The vertebrate complement system, comprised of a large number of distinct plasma proteins, is an effector of both the acquired and innate immune systems. The point of convergence of the classical, alternative and lectin pathways of the complement system is the proteolytic activation of C3. C4 plays a key role in propagating the classical and lectin pathways. C5 participates in the classical and alternative pathways. The thioester bond located within the structure of C3 and C4 is central to the function of complement. C5 does not contain an active thioester bond.


Pssm-ID: 239226 [Multi-domain]  Cd Length: 297  Bit Score: 280.31  E-value: 1.19e-85
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  667 SINGLASLIRMPYGCGEQNMINFAPNIYILDYLTKKKQ---LTDNLKEKALSFMRQGYQRELLYQREDGSFSAFGNYDPS 743
Cdd:cd02896      1 SPEGLEKLIRLPTGCGEQTMIKLAPTVYALRYLDTTNQwekLGPERRDEALKYIRQGYQRQLSYRKPDGSYAAWKNRPSS 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  744 gsTWLSAFVLRCFLEADPYIDIDQNVLHRTYTWLKGHQKSNGEFWDPGRVIHSELQGG---NKSPVTLTAYIVTSLLGYR 820
Cdd:cd02896     81 --TWLTAFVVKVFSLARKYIPVDQNVICGSVNWLISNQKPDGSFQEPSPVIHREMTGGvegSEGDVSLTAFVLIALQEAR 158
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  821 KYQPNI--DVQESIH----FLESEFSrGISDNYTLALITYALSSVGSPKAKEALNMLTWRAEQEGGMQFWVSSESKLSDS 894
Cdd:cd02896    159 SICPPEvqNLDQSIRkaisYLENQLP-NLQRPYALAITAYALALADSPLSHAANRKLLSLAKRDGNGWYWWTIDSPYWPV 237
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  895 WQPRSLDIEVAAYALLSHFLQFQTSEGIPIMRWLSRQRNSLGGFASTQDTTVALKALSEF 954
Cdd:cd02896    238 PGPSAITVETTAYALLALLKLGDIEYANPIARWLTEQRNYGGGFGSTQDTVVALQALAEY 297
ISOPREN_C2_like cd00688
This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two ...
667-954 3.87e-68

This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly specific proteinase inhibitors alpha2-macroglobulin (alpha (2)-M) and pregnancy zone protein (PZP) and, the C3 C4 and C5 components of vertebrate complement. Class II terpene cyclases include squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY), these integral membrane proteins catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. The protein prenyltransferases include protein farnesyltransferase (FTase) and geranylgeranyltransferase types I and II (GGTase-I and GGTase-II) which catalyze the carboxyl-terminal lipidation of Ras, Rab, and several other cellular signal transduction proteins, facilitating membrane associations and specific protein-protein interactions. Alpha (2)-M is a major carrier protein in serum and involved in the immobilization and entrapment of proteases. PZP is a pregnancy associated protein. Alpha (2)-M and PZP are known to bind to and, may modulate, the activity of placental protein-14 in T-cell growth and cytokine production thereby protecting the allogeneic fetus from attack by the maternal immune system.


Pssm-ID: 238362 [Multi-domain]  Cd Length: 300  Bit Score: 231.29  E-value: 3.87e-68
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  667 SINGLASLIRMPYG--------CGEQNMINFAPNIYILDYLTkkkqlTDNLKEKALSFMRQGYQRELLYQREDGSFSAFG 738
Cdd:cd00688      1 IEKHLKYLLRYPYGdghwyqslCGEQTWSTAWPLLALLLLLA-----ATGIRDKADENIEKGIQRLLSYQLSDGGFSGWG 75
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  739 NYDpSGSTWLSAFVLRCFLEADPYIDIDQNVLHRTYTWLKGHQKSNGEFWDPGRVIHSelQGGNKSPVTLTAYIVTSLLG 818
Cdd:cd00688     76 GND-YPSLWLTAYALKALLLAGDYIAVDRIDLARALNWLLSLQNEDGGFREDGPGNHR--IGGDESDVRLTAYALIALAL 152
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  819 YRKYQPNIDVQESIHFLESEF-------SRGISDNYTLALITYALSSVGS---PKAKEALNMLTWRAEQEGGMQFWVSSE 888
Cdd:cd00688    153 LGKLDPDPLIEKALDYLLSCQnydggfgPGGESHGYGTACAAAALALLGDldsPDAKKALRWLLSRQRPDGGWGEGRDRT 232
                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462606136  889 SKLSDswqprSLDIEVAAYALLSHFLQFQTSEGIPIMRWLSRQRNSLGGFAS-------TQDTTVALKALSEF 954
Cdd:cd00688    233 NKLSD-----SCYTEWAAYALLALGKLGDLEDAEKLVKWLLSQQNEDGGFSSkpgksydTQHTVFALLALSLY 300
YfaS COG2373
Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function ...
6-1009 2.13e-38

Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function prediction only];


Pssm-ID: 441940 [Multi-domain]  Cd Length: 1605  Bit Score: 157.16  E-value: 2.13e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136    6 LNGTITAKYTYGKPVKG---DVTLTFLPLSFwgkkknitkTFKinGSANFSFNDEEMKN---VMDSSNG----------- 68
Cdd:COG2373    489 VTVTVDARYLFGAPAAGlkvEGEVTLRPART---------AFP--GYPGYRFGDPDEEFepeELDLGEGtldadgkasls 557
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136   69 --LSEYLDLSSPGPVEILTTVTESvTG--ISRNVSTNVFFKQHdYI-IEFFDYTTVLKPSlNFTATVKVTRADGNQLTle 143
Cdd:COG2373    558 lpLPDAPDAPGPLRATVEASVFES-GGrpVTRSATVPVHPADF-YVgIRLPLFDGDPEGA-PATFEVVAVDPDGKPVA-- 632
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  144 erRNNVVITVTQRNYTEYWSGSNSGNQKMEAVQK------------------INYTVPQSGTFKIEfpiLEDSSELQL-- 203
Cdd:COG2373    633 --GKGLKVELYREEWRYVWYKSDDGGWRYESQEKeepvaegtlttgadgpasLSLTPVEWGRYRLE---VKDPDGGLAts 707
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  204 KAYFLGSKSSmavhslFKSPSKTYIQLKTRDENIKVG--------SPFE----LVVSGNKRLKElsymvvsrgQLVAVGK 271
Cdd:COG2373    708 VRFYAGGNAS------WGAERPDRLELSLDKESYKPGetaklliqSPFAgralVTVERDGVLET---------QWVDVKG 772
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  272 qNSTMFSLTPENSWTPKACVIVYYI--EDDGEIISD-----VLKIPVQLV-FKNKIKLywsKV--KAEPSEKVSLRISVT 341
Cdd:COG2373    773 -GGTTVEIPVTEDWAPNAYVSATLVrpGDSTANDMParaygVAPLPVDPPaRRLKVEL---TApeKLRPGETLTVTVKVK 848
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  342 QPD---SIVGIVAVDKSV-NLMNasnditmenvvhelelYNT----GYYlgmfmnsfavFQECGLWVLTDANLtkDYIDG 413
Cdd:COG2373    849 GAAgkaAEVTLAAVDEGIlNLTG----------------YKTpdplDFF----------YGKRALGVETRDLY--GRLIG 900
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  414 VYDNAEYAERF---MEENEGhivdihdfslGSSPHVRKHFPETWIW---LDTNMGSRIyqEFEVTVPDSITSWVATGFVI 487
Cdd:COG2373    901 AFGGAAGALRSggdGALGRG----------GNPKPPRKRFKPVALFsgpVKTDADGKA--TVSFDLPDFNGTLRVMAVAW 968
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  488 SED-LGLGLTTTPVElqafQPFFIFLNLPYSVIRGEEFALEITIFNYLKDATEVKVIIEKSDKFDILMTSSeinatghqQ 566
Cdd:COG2373    969 SDDrFGSAEATVTVR----KPLVVRPSLPRFLAPGDRFELPVDVFNLTGKAGTVTVTLEASGGLTLEGEAT--------Q 1036
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  567 TLLVPSEDGATVLFPIRPTHLGEIPITVTALSPTASDAITQMILVKAEGIEKSYSQSILLDltdnrlQSTLKTLSFSFPP 646
Cdd:COG2373   1037 TVTLAAGGRATVRFPLKAPDAGDAKVTVTATGGGESDAREVELPVRPANPLVTRATSGVLA------PGESWTLPLDLPG 1110
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  647 NTVTGSERVQI----TAIGDVLGpsinGLASLIRMPYGCGEQNMINFAPNIYILDyLTKKKQLTDNLKEKALSFMRQGYQ 722
Cdd:COG2373   1111 GLRPGTGSLTLslssSPPLDLAG----LLRYLLRYPYGCTEQTTSRALPLLYLSD-LAEALGLKGDKDAELRARIQAAIA 1185
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  723 RELLYQREDGSFSAFGNYDPSgSTWLSAFVLRCFLEADPY-IDIDQNVLHRTYTWLKGHQKSNGEFwdpgrvihsELQGG 801
Cdd:COG2373   1186 RLLSMQNSDGGFGLWPGGSES-DPWLTAYATDFLLEAREAgYAVPDDALDRALDYLRNYLRNPWEI---------EYDDA 1255
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  802 NKSPVTLTAYIVTSLLGyrkyQPNIDVQESIHFLESEFsrgiSDNYTLALITYALSSVG-SPKAKEALNMLtWRAEQEGG 880
Cdd:COG2373   1256 YRLAVRAYALYVLARAG----KADLGDLRYLYDRRKDA----LSPLAKAQLAAALALLGdKARAEELLAAA-LARLRETG 1326
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  881 M--QFWVSSESKLSDswqpRSLdievAAYALLSHFLQFQTSEgiPIMRWLSRQRNSlGGFASTQDTTVALKALSEFAAlM 958
Cdd:COG2373   1327 ArdYWYGDYGSPLRD----QAL----ALALLAELGPDAPLAP--KLARWLAKALKS-GRWLSTQETAWALLALAAYAR-A 1394
                         1050      1060      1070      1080      1090
                   ....*....|....*....|....*....|....*....|....*....|.
gi 2462606136  959 NTERTNIQVTVTGPSSPSPVkfliDTHNRLLLQTAELAVVQPTAVNISANG 1009
Cdd:COG2373   1395 AGASPDFTATLTLDGKTLPL----TGRGPLARVTLPAAELLAGPLTITNTG 1441
A2M pfam00207
Alpha-2-macroglobulin family; This family includes the C-terminal region of the ...
453-544 1.36e-35

Alpha-2-macroglobulin family; This family includes the C-terminal region of the alpha-2-macroglobulin family.


Pssm-ID: 459711 [Multi-domain]  Cd Length: 91  Bit Score: 130.01  E-value: 1.36e-35
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  453 TWIWLDTNMGSRIYQEFEVTVPDSITSWVATGFVISEDLGLGLTTtPVELQAFQPFFIFLNLPYSVIRGEEFALEITIFN 532
Cdd:pfam00207    1 TWLWDPVLVTDNGKASLSFTLPDSITTWRATAFALSPDTGLGVAE-PPELVVFKPFFVDLNLPYSVRRGEQFELKATVFN 79
                           90
                   ....*....|..
gi 2462606136  533 YLKDATEVKVII 544
Cdd:pfam00207   80 YLDKCLKVRVRL 91
A2M_recep pfam07677
A-macroglobulin receptor binding domain; This family includes the receptor binding domain ...
1069-1156 3.56e-27

A-macroglobulin receptor binding domain; This family includes the receptor binding domain region of the alpha-2-macroglobulin family.


Pssm-ID: 462226  Cd Length: 92  Bit Score: 106.11  E-value: 3.56e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136 1069 GRSGMALMEVNLLSGFMVPSEAISL---SETVKKVE-YDHGKLNLYLDSVNETQFCVNIPAVRNFKVSNTQDASVSIVDY 1144
Cdd:pfam07677    1 ESSNMAILEVGLPSGFVPDEEDLKKlgvDPLIKRVEtVDDGKVILYLDKLSGEPLCFSFRAEQTFPVANLKPAPVKVYDY 80
                           90
                   ....*....|..
gi 2462606136 1145 YEPRRQAVRSYN 1156
Cdd:pfam07677   81 YEPERRATTFYS 92
A2M_BRD pfam07703
Alpha-2-macroglobulin bait region domain; Alpha-2-macroglobulins (A2Ms) are plasma proteins ...
228-359 3.43e-24

Alpha-2-macroglobulin bait region domain; Alpha-2-macroglobulins (A2Ms) are plasma proteins that trap and inhibit a broad range of proteases and are major components of the eukaryotic innate immune system. However, A2M-like proteins were identified in pathogenically invasive bacteria and species that colonize higher eukaryotes. This domain is found in eukaryotic and bacterial proteins. In human A2Ms, this domain encompasses macroglobulin-like domain MG5 and 6 including bait region. In Salmonella enterica ser A2Ms, this domain encompasses MG7 and MG8 including the bait region. The Bait region is cleaved by proteases, followed by a large conformational change that blocks the target protease within a cage-like complex. This model of protease entrapment is recognized as the Venus flytrap mechanism.


Pssm-ID: 462235 [Multi-domain]  Cd Length: 139  Bit Score: 99.35  E-value: 3.43e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  228 IQLKTRDENIKVGSPFELVV----SGNKRLKELSYMVVSRGQLVAVG-KQNSTMFSLTPENSWTPKACVIVYYI---EDD 299
Cdd:pfam07703    1 LHLSTDKTEYKPGETATVTVkspfDGTVERDGFTYLVLSKGQIVVVGrGGVTTSFSLPVTAEMAPSARVVAYYVrvdLSK 80
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606136  300 GEIISDVLKIPVQLVFKNKIKLYWSKVKAEPSEKVSLRISVtQPDSIVGIVAVDKSVNLM 359
Cdd:pfam07703   81 PEVVADSVWVDVDDTCENKLKVTLSAEKYRPGSTVELKVKA-DPGAYVALAAVDKGVLLL 139
MG3 pfam17791
Macroglobulin domain MG3; This entry corresponds to the MG3 domain found in complement ...
1-61 7.03e-11

Macroglobulin domain MG3; This entry corresponds to the MG3 domain found in complement components C3, C4 and C5.


Pssm-ID: 465509  Cd Length: 83  Bit Score: 59.59  E-value: 7.03e-11
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462606136    1 MNSKHLNGTITAKYTYGKPVKGDVTLTFLPLSFWGKKKN--ITKTFKING--SANFSFNDEEMKN 61
Cdd:pfam17791   19 VKDEEFQVTICAKYTYGKPVKGKAYVTLCLKDDSKRKCFesFSKELDKDGcgSASLSTEEFQLTF 83
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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