|
Name |
Accession |
Description |
Interval |
E-value |
| beta-trefoil_Ricin_CRYBG1 |
cd23464 |
ricin B-type lectin domain, beta-trefoil fold, found in beta/gamma crystallin ... |
1890-2026 |
2.71e-89 |
|
ricin B-type lectin domain, beta-trefoil fold, found in beta/gamma crystallin domain-containing protein 1 (CRYBG1) and similar proteins; CRYBG1, also called absent in melanoma 1 protein (AIM1), may function as a suppressor of malignant melanoma. It may exert its effects through interactions with the cytoskeleton. CRYBG1 belongs to the beta/gamma-crystallin family. It contains a ricin B-type lectin domain at the C-terminus. The ricin B-type lectin domain shows a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket.
Pssm-ID: 467342 Cd Length: 137 Bit Score: 286.31 E-value: 2.71e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1890 QKRIYFRLRNKATGLFMSTNGNLEDLKLLRIQVMEDVGADDQIWIYQEGCIKCRIAEDCCLTIVGSLVTSGSKLGLALDQ 1969
Cdd:cd23464 1 QKRVYFRLRNKETGCFMSTNGNLDDLKLLRIQVLEDTGSDDQIWVYQDGLIRCRMAEDCCLETVGNLVTAGSKLGLSLEQ 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 2462606408 1970 NADSQFWSLKSDGRIYSKLKPNLVLDIKGGTQYDQNHIILNTVSKEKFTQVWEAMVL 2026
Cdd:cd23464 81 GKDNQFWSITSDGRIYSKLKPDLVLDIKGGQQYDQNHVILNTFDEEKLTQRWEVEIL 137
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1524-1617 |
5.05e-33 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 122.99 E-value: 5.05e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1524 KVVVYEKPFFEGKCVELETGMCSFvmeggeteeatgDDHLPFTSVGSMKVLRGIWVAYEKPGFTGHQYLLEEGEYRDWKA 1603
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSL------------QERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSD 68
|
90
....*....|....
gi 2462606408 1604 WGGYNGELQSLRPI 1617
Cdd:pfam00030 69 WGAPNDRIGSLRPI 82
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1625-1708 |
1.59e-29 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 112.97 E-value: 1.59e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1625 HMIMYSEKNFgsKGSSIDVLGIVANLKETGYGVKTQSINVLSGVWVAYENPDFTGEQYILDKGFYTSFEDWGGKNCKISS 1704
Cdd:pfam00030 1 KIVLYEKENF--QGRSIELTDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRIGS 78
|
....
gi 2462606408 1705 VQPI 1708
Cdd:pfam00030 79 LRPI 82
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1809-1887 |
1.76e-28 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 110.28 E-value: 1.76e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1809 IILFEREDFKGKKIELNAETVNLRSLGFNTQIRSVQVIGGIWVTYEYGSYRGRQFLLSPAEVPNWYEFSG-CRQIGSLRP 1887
Cdd:pfam00030 2 IVLYEKENFQGRSIELTDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGApNDRIGSLRP 81
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1524-1617 |
3.24e-28 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 109.52 E-value: 3.24e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1524 KVVVYEKPFFEGKCVELETGMCSFVMEGGETEeatgddhlpftsVGSMKVLRGIWVAYEKPGFTGHQYLLEEGEYRDWKA 1603
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDCPSLQDYGSRDN------------VSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQE 68
|
90
....*....|....
gi 2462606408 1604 WGGYNGELQSLRPI 1617
Cdd:smart00247 69 WGGFNDQISSIRRI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1809-1887 |
1.48e-27 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 107.59 E-value: 1.48e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1809 IILFEREDFKGKKIELNAETVNLRSLGFNTQIRSVQVIGGIWVTYEYGSYRGRQFLLSPAEVPNWYEFSG-CRQIGSLRP 1887
Cdd:smart00247 2 ITLYEDENFQGRSYELSDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGfNDQISSIRR 81
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1721-1800 |
1.03e-25 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 102.19 E-value: 1.03e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1721 QIHLFSEPQFQGHSQSFEETTSQIDDSF---STKSCRVSGGSWVVYDGENFTGNQYVLEEGHYPCLSAMGCpPGATFKSL 1797
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGfnsRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGA-PNDRIGSL 79
|
...
gi 2462606408 1798 RFI 1800
Cdd:pfam00030 80 RPI 82
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1429-1510 |
2.58e-25 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 101.03 E-value: 2.58e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1429 HIDLFTEPEGLGILSSYFDDTEEMQGFGVMQKTCSMKVHWGTWLIYEEPGFQGVPFILEPGEYPDLSFWDTEAAYIGSMR 1508
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRIGSLR 80
|
..
gi 2462606408 1509 PL 1510
Cdd:pfam00030 81 PI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1625-1708 |
1.62e-23 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 96.04 E-value: 1.62e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1625 HMIMYSEKNFGskGSSIDVLGIVANLKETGYGVKTQSINVLSGVWVAYENPDFTGEQYILDKGFYTSFEDWGGKNCKISS 1704
Cdd:smart00247 1 KITLYEDENFQ--GRSYELSDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNDQISS 78
|
....
gi 2462606408 1705 VQPI 1708
Cdd:smart00247 79 IRRI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1429-1510 |
7.46e-21 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 88.33 E-value: 7.46e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1429 HIDLFTEPEGLGILSSYFDDTEEMQGFGVMQKTCSMKVHWGTWLIYEEPGFQGVPFILEPGEYPDLSFWDTEAAYIGSMR 1508
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNDQISSIR 80
|
..
gi 2462606408 1509 PL 1510
Cdd:smart00247 81 RI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1721-1800 |
1.29e-20 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 87.95 E-value: 1.29e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1721 QIHLFSEPQFQGHSQSFEETTSQIDDSFS---TKSCRVSGGSWVVYDGENFTGNQYVLEEGHYPCLSAMGcPPGATFKSL 1797
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDCPSLQDYGSrdnVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWG-GFNDQISSI 79
|
...
gi 2462606408 1798 RFI 1800
Cdd:smart00247 80 RRI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1328-1419 |
3.90e-18 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 80.63 E-value: 3.90e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1328 KVVIYSEPDVSEKCIEVFSD---IQDCSSWSLspVILIKVVRGCWILYEQPNFEGHSIPLEEGELELSGLWGiedilerh 1404
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDcpsLQDYGSRDN--VSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWG-------- 70
|
90
....*....|....*
gi 2462606408 1405 eeAESDKpvvIGSIR 1419
Cdd:smart00247 71 --GFNDQ---ISSIR 80
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1328-1421 |
2.48e-13 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 67.13 E-value: 2.48e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1328 KVVIYSEPDVSEKCIEVFSDIQDCSSWSLSPVIL-IKVVRGCWILYEQPNFEGHSIPLEEGELELSGLWGiedilerhee 1406
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGFNSRVNsIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWG---------- 70
|
90
....*....|....*
gi 2462606408 1407 AESDKpvvIGSIRHV 1421
Cdd:pfam00030 71 APNDR---IGSLRPI 82
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
89-518 |
1.90e-12 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 72.90 E-value: 1.90e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 89 EAEGELPESGGPAAPPDAELSPRWSSS---------AAAVAVQQCHENDSPQLEPLEAEGEPFPDATTTAKQLHSSPGNS 159
Cdd:PHA03307 14 AAEGGEFFPRPPATPGDAADDLLSGSQgqlvsdsaeLAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLS 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 160 SRQENAETPARSPGEDASPGAgheqeaflgvrgaPGSPTQERPAGGLGEAPNGAPSVCAEEGSLGPRNARSQPrkgasdL 239
Cdd:PHA03307 94 TLAPASPAREGSPTPPGPSSP-------------DPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPP------A 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 240 PGEPPAEGAAHTASSAQA-------DCTARPKGHAHPAKVLtldiyLSKTEGAQVDEPVVITPRAEDCGDWDDMEKRSSG 312
Cdd:PHA03307 155 AGASPAAVASDAASSRQAalplsspEETARAPSSPPAEPPP-----STPPAAASPRPPRRSSPISASASSPAPAPGRSAA 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 313 RRSGRRRGSQKSTDSPGADAELPESAARDDAVFDD---EVAPNAASDNASAEKKVKSPRAAlDGGVASAASPESKPSPGT 389
Cdd:PHA03307 230 DDAGASSSDSSSSESSGCGWGPENECPLPRPAPITlptRIWEASGWNGPSSRPGPASSSSS-PRERSPSPSPSSPGSGPA 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 390 KGQLRGESDRSKQPPPASSPTKRKGRSRALEAVPAPPASGpRAPAKESPPKRVPDPSPVTKGTAAESGEEAARAIPRELP 469
Cdd:PHA03307 309 PSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPS-RSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTR 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 2462606408 470 VKSSSLLPEIKpehkrgpLPNHFNGRAEGGRSRELGRAA-GAPGASDADG 518
Cdd:PHA03307 388 RRARAAVAGRA-------RRRDATGRFPAGRPRPSPLDAgAASGAFYARY 430
|
|
| RICIN |
smart00458 |
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. |
1899-2021 |
1.03e-09 |
|
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication.
Pssm-ID: 214672 [Multi-domain] Cd Length: 118 Bit Score: 57.91 E-value: 1.03e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1899 NKATGLFMSTNGNLedlklLRIQVMEDVGADD-QIWIY-QEGCIKCRiAEDCCLTIVGSLvtsGSKLGLALDQN-ADSQF 1975
Cdd:smart00458 3 SGNTGKCLDVNGNK-----NPVGLFDCHGTGGnQLWKLtSDGAIRIK-DTDLCLTANGNT---GSTVTLYSCDGtNDNQY 73
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 2462606408 1976 WSLKSDGRIYSkLKPNLVLDIKGGTqyDQNHIILNTVSKEKfTQVW 2021
Cdd:smart00458 74 WEVNKDGTIRN-PDSGKCLDVKDGN--TGTKVILWTCSGNP-NQKW 115
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
162-541 |
2.38e-07 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 55.84 E-value: 2.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 162 QENAETPARSPGEDASPGAGHEQEAFLGVRGAPGSPTQERPA-----GGLGEAPNGAPSVCAEEgsLGPRNARSQPRKGA 236
Cdd:COG5180 15 VPIPPNAARPVLSPELWAAANNDAVSQGDRSALASSPTRPYArkifePLDIKLALGKPQLPSVA--EPEAYLDPAPPKSS 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 237 SDLPGEPPAEGAAHTASSAQADCTARPKG-----HAHPAKVLTLDIYLSKTEGAQVD-EPVVITPRAEDcGDWDDMEKRS 310
Cdd:COG5180 93 PDTPEEQLGAPAGDLLVLPAAKTPELAAGalpapAAAAALPKAKVTREATSASAGVAlAAALLQRSDPI-LAKDPDGDSA 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 311 SGRRSGRRRGSQKSTDSPGADAELPESAARDDAVFDDEV---------APNAASDNASAEKKVKSP---RAALDGGVASA 378
Cdd:COG5180 172 STLPPPAEKLDKVLTEPRDALKDSPEKLDRPKVEVKDEAqeeppdltgGADHPRPEAASSPKVDPPstsEARSRPATVDA 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 379 ASPESKPSPGTKGQLRGESDRSKQPPPAS------------SPTKRKGRSRALEAV-PAPPASGPRAPAKESPPKRVPDP 445
Cdd:COG5180 252 QPEMRPPADAKERRRAAIGDTPAAEPPGLpvleagsepqsdAPEAETARPIDVKGVaSAPPATRPVRPPGGARDPGTPRP 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 446 SPVTKgTAAESGEEAARAIPRELPVKSSSLLPEIKPEHKRGPLPNHFNG-----RAEGGRSRELGRAAGAPGAsdADGLK 520
Cdd:COG5180 332 GQPTE-RPAGVPEAASDAGQPPSAYPPAEEAVPGKPLEQGAPRPGSSGGdgapfQPPNGAPQPGLGRRGAPGP--PMGAG 408
|
410 420
....*....|....*....|.
gi 2462606408 521 PRNHFGVGRSTVTTKVTLPAK 541
Cdd:COG5180 409 DLVQAALDGGGRETASLGGAA 429
|
|
| Ricin_B_lectin |
pfam00652 |
Ricin-type beta-trefoil lectin domain; |
1894-2021 |
8.86e-07 |
|
Ricin-type beta-trefoil lectin domain;
Pssm-ID: 395527 [Multi-domain] Cd Length: 126 Bit Score: 49.84 E-value: 8.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1894 YFRLRNKATGLFMSTNGNLEDLKLLRIQVMEDvGADDQIW-IYQEGCIKCRiAEDCCLTIVGSlvTSGSKLGLAL-DQNA 1971
Cdd:pfam00652 2 TGRIRNRASGKCLDVPGGSSAGGPVGLYPCHG-SNGNQLWtLTGDGTIRSV-ASDLCLDVGST--ADGAKVVLWPcHPGN 77
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 2462606408 1972 DSQFWSLKSDGR-IYSKlKPNLVLDIKGGTQyDQNHIILNTVSKEKFTQVW 2021
Cdd:pfam00652 78 GNQRWRYDEDGTqIRNP-QSGKCLDVSGAGT-SNGKVILWTCDSGNPNQQW 126
|
|
| Treacle |
pfam03546 |
Treacher Collins syndrome protein Treacle; |
154-635 |
4.36e-06 |
|
Treacher Collins syndrome protein Treacle;
Pssm-ID: 460967 [Multi-domain] Cd Length: 531 Bit Score: 51.61 E-value: 4.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 154 SSPGNSSRQEnaETPARSPGEDASPGAGHEQeaflgVRGApGSPTQERPAGGLGEAPNGAPSVCAEEGSLGPRNARSQPR 233
Cdd:pfam03546 27 SSEEESDSEE--ETPAAKTPLQAKPSGKTPQ-----VRAA-SAPAKESPRKGAPPVPPGKTGPAAAQAQAGKPEEDSESS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 234 KGASDLPGEPPAeGAAHTASSAQAdctaRPKG---HAHPAKVLTLDiylSKTEGAQVDEPVVITPRAedcgdwddmekrs 310
Cdd:pfam03546 99 SEESDSDGETPA-AATLTTSPAQV----KPLGknsQVRPASTVGKG---PSGKGANPAPPGKAGSAA------------- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 311 sGRRSGRRRGSQKSTDSPGADAELPESAARDDAVFDDEVAPNAASDNASAEKKVKSPRAAldGGVASAASPESkpSPGTK 390
Cdd:pfam03546 158 -PLVQVGKKEEDSESSSEESDSEGEAPPAATQAKPSGKILQVRPASGPAKGAAPAPPQKA--GPVATQVKAER--SKEDS 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 391 GQLRGESDRSKQPPPASSPTKRKGRSRALEAVPAPPASGPRAPAK-ESPPKRVPDPSPVTKGTAAESGEEAARAIPR--E 467
Cdd:pfam03546 233 ESSEESSDSEEEAPAAATPAQAKPALKTPQTKASPRKGTPITPTSaKVPPVRVGTPAPWKAGTVTSPACASSPAVARgaQ 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 468 LPVKSSSLLPEIKPEHKRGPLPNhfNGRAEGGRSRELGRAAGAPGAsdadglkprnhfgvGRSTVTTKVTLPAKPKHVEL 547
Cdd:pfam03546 313 RPEEDSSSSEESESEEETAPAAA--VGQAKSVGKGLQGKAASAPTK--------------GPSGQGTAPVPPGKTGPAVA 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 548 NLKTPKNLDSLGNEHNPFSQP--VHKGNTATKISLFENKRTNSSPRHTDIRGQRNTPASSKTFVGRAKLNLAKKAKemeq 625
Cdd:pfam03546 377 QVKAEAQEDSESSEEESDSEEaaATPAQVKASGKTPQAKANPAPTKASSAKGAASAPGKVVAAAAQAKQGSPAKVK---- 452
|
490
....*....|
gi 2462606408 626 PEKKVMPNSP 635
Cdd:pfam03546 453 PPARTPQNSA 462
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
322-447 |
5.20e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 41.29 E-value: 5.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 322 QKSTDSPGADAELPEsAARDDAVFDDEVAPNAASDNASAEKKVKSPRAALDGGVASAASPESKPSPGTKGQLRGESDRSK 401
Cdd:NF040712 208 EPADARPEEVEPAPA-AEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGEPPAPGAA 286
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 2462606408 402 QPPPASSPTkrkgrsralEAVPAPPAsGPRAPAKESPPKRVPDPSP 447
Cdd:NF040712 287 ETPEAAEPP---------APAPAAPA-APAAPEAEEPARPEPPPAP 322
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| beta-trefoil_Ricin_CRYBG1 |
cd23464 |
ricin B-type lectin domain, beta-trefoil fold, found in beta/gamma crystallin ... |
1890-2026 |
2.71e-89 |
|
ricin B-type lectin domain, beta-trefoil fold, found in beta/gamma crystallin domain-containing protein 1 (CRYBG1) and similar proteins; CRYBG1, also called absent in melanoma 1 protein (AIM1), may function as a suppressor of malignant melanoma. It may exert its effects through interactions with the cytoskeleton. CRYBG1 belongs to the beta/gamma-crystallin family. It contains a ricin B-type lectin domain at the C-terminus. The ricin B-type lectin domain shows a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket.
Pssm-ID: 467342 Cd Length: 137 Bit Score: 286.31 E-value: 2.71e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1890 QKRIYFRLRNKATGLFMSTNGNLEDLKLLRIQVMEDVGADDQIWIYQEGCIKCRIAEDCCLTIVGSLVTSGSKLGLALDQ 1969
Cdd:cd23464 1 QKRVYFRLRNKETGCFMSTNGNLDDLKLLRIQVLEDTGSDDQIWVYQDGLIRCRMAEDCCLETVGNLVTAGSKLGLSLEQ 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 2462606408 1970 NADSQFWSLKSDGRIYSKLKPNLVLDIKGGTQYDQNHIILNTVSKEKFTQVWEAMVL 2026
Cdd:cd23464 81 GKDNQFWSITSDGRIYSKLKPDLVLDIKGGQQYDQNHVILNTFDEEKLTQRWEVEIL 137
|
|
| beta-trefoil_Ricin_CRYBG |
cd23430 |
ricin B-type lectin domain, beta-trefoil fold, found in the beta/gamma crystallin ... |
1893-2025 |
1.34e-76 |
|
ricin B-type lectin domain, beta-trefoil fold, found in the beta/gamma crystallin domain-containing protein (CRYBG) family; The CRYBG family includes three members: CRYBG1, CRYBG2, and CRYBG3/vlAKAP. CRYBG1, also called absent in melanoma 1 protein (AIM1), may function as a suppressor of malignant melanoma. It may exert its effects through interactions with the cytoskeleton. CRYBG2 is also called absent in melanoma 1-like protein (AIM1L). CRYBG3/vlAKAP, also called very large A-kinase anchor protein, is an anchoring protein that mediates the subcellular compartmentation of protein kinase A (PKA). It binds to the dimeric RII-alpha regulatory subunit of PKA (PRKAR2A/PRKAR2B). CRYBG proteins belong to the beta/gamma-crystallin family. They all contain a ricin B-type lectin domain with a beta-trefoil fold at the C-terminus. The beta-trefoil fold is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket.
Pssm-ID: 467308 [Multi-domain] Cd Length: 133 Bit Score: 249.82 E-value: 1.34e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1893 IYFRLRNKATGLFMSTNGNLEDLKLLRIQVMEDVGADDQIWIYQEGCIKCRIAEDCCLTIVGSLVTSGSKLGLALDQNAD 1972
Cdd:cd23430 1 VYFRLRNKATGLFLSVNGNLEDLKLLRVQVMPDVGADDQIWYYQEGLIKCRIAEDCCLTVIGSLVTPGSKVGLWLEQNAD 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2462606408 1973 SQFWSLKSDGRIYSKLKPNLVLDIKGGTQYDQNHIILNTVSKEKFTQVWEAMV 2025
Cdd:cd23430 81 RQFWSLKSDGRIYSKLKPNLVLDVKGGTQYDQNHVILNTPSEEKFTQVWEIMV 133
|
|
| beta-trefoil_Ricin_vlAKAP |
cd23463 |
ricin B-type lectin domain, beta-trefoil fold, found in very large A-kinase anchor protein ... |
1890-2026 |
2.00e-33 |
|
ricin B-type lectin domain, beta-trefoil fold, found in very large A-kinase anchor protein (vlAKAP) and similar proteins; vlAKAP, also called beta/gamma crystallin domain-containing protein 3 (CRYBG3), is an anchoring protein that mediates the subcellular compartmentation of protein kinase A (PKA). It binds to the dimeric RII-alpha regulatory subunit of PKA (PRKAR2A/PRKAR2B). vlAKAP belongs to the beta/gamma-crystallin family. It contains a ricin B-type lectin domain at the C-terminus. The ricin B-type lectin domain shows a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket.
Pssm-ID: 467341 Cd Length: 136 Bit Score: 126.40 E-value: 2.00e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1890 QKRIYFRLRNKATGLFMSTNGNLEDLKLLRIQVMEDVGADDQIWIYQEGCIKCRiAEDCCLTIVGSLVTSGSKLGLALDQ 1969
Cdd:cd23463 1 QPRVYLRIKNRAQGLYLTTEGNLADPRATSVCVSQYNGKDTQIWYYCRGLLKSK-ANDACLDVIGGKDNPGSKVALWTEH 79
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 2462606408 1970 NADSQFWSLKSDGRIYSKLKPNLVLDIKGGTQYDQNHIILNTVSKEKFTQVWEAMVL 2026
Cdd:cd23463 80 GKTHQKWRINEDGTISSHLSDDLVLDLKGGNYYDKDHLIVNNPEEDQQTQKWDIELL 136
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1524-1617 |
5.05e-33 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 122.99 E-value: 5.05e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1524 KVVVYEKPFFEGKCVELETGMCSFvmeggeteeatgDDHLPFTSVGSMKVLRGIWVAYEKPGFTGHQYLLEEGEYRDWKA 1603
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSL------------QERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSD 68
|
90
....*....|....
gi 2462606408 1604 WGGYNGELQSLRPI 1617
Cdd:pfam00030 69 WGAPNDRIGSLRPI 82
|
|
| beta-trefoil_Ricin_CRYBG2 |
cd23465 |
ricin B-type lectin domain, beta-trefoil fold, found in beta/gamma crystallin ... |
1890-2026 |
5.10e-30 |
|
ricin B-type lectin domain, beta-trefoil fold, found in beta/gamma crystallin domain-containing protein 2 (CRYBG2) and similar proteins; CRYBG2, also called absent in melanoma 1-like protein (AIM1L), is a beta/gamma-crystallin family protein with a ricin B-type lectin domain at the C-terminus. The ricin B-type lectin domain shows a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket.
Pssm-ID: 467343 Cd Length: 136 Bit Score: 116.51 E-value: 5.10e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1890 QKRIYFRLRNKATGLFMSTNGNLEDLKLLRIQVMEDVGADDQIWIYQEGCIKCRIAEDCCLTIVGSlVTSGSKLGLALDQ 1969
Cdd:cd23465 1 QRRVYFRLRNRELGLYLAVPDGVEDMKAGRVVVTEQQEGMSHVWFYEDGLLKNQMAPTMSLQVIGP-PDNGAKVVLWSET 79
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 2462606408 1970 NADSQFWSLKSDGRIYSKLKPNLVLDIKGGTQYDQNHIILNTVSKEKFTQVWEAMVL 2026
Cdd:cd23465 80 RQPRQTWSIQPSGHILSQMFEGMILDVKGGRTYDRDHVVLWEVSEERPSQIWDMEVL 136
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1625-1708 |
1.59e-29 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 112.97 E-value: 1.59e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1625 HMIMYSEKNFgsKGSSIDVLGIVANLKETGYGVKTQSINVLSGVWVAYENPDFTGEQYILDKGFYTSFEDWGGKNCKISS 1704
Cdd:pfam00030 1 KIVLYEKENF--QGRSIELTDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRIGS 78
|
....
gi 2462606408 1705 VQPI 1708
Cdd:pfam00030 79 LRPI 82
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1809-1887 |
1.76e-28 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 110.28 E-value: 1.76e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1809 IILFEREDFKGKKIELNAETVNLRSLGFNTQIRSVQVIGGIWVTYEYGSYRGRQFLLSPAEVPNWYEFSG-CRQIGSLRP 1887
Cdd:pfam00030 2 IVLYEKENFQGRSIELTDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGApNDRIGSLRP 81
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1524-1617 |
3.24e-28 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 109.52 E-value: 3.24e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1524 KVVVYEKPFFEGKCVELETGMCSFVMEGGETEeatgddhlpftsVGSMKVLRGIWVAYEKPGFTGHQYLLEEGEYRDWKA 1603
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDCPSLQDYGSRDN------------VSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQE 68
|
90
....*....|....
gi 2462606408 1604 WGGYNGELQSLRPI 1617
Cdd:smart00247 69 WGGFNDQISSIRRI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1809-1887 |
1.48e-27 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 107.59 E-value: 1.48e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1809 IILFEREDFKGKKIELNAETVNLRSLGFNTQIRSVQVIGGIWVTYEYGSYRGRQFLLSPAEVPNWYEFSG-CRQIGSLRP 1887
Cdd:smart00247 2 ITLYEDENFQGRSYELSDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGfNDQISSIRR 81
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1721-1800 |
1.03e-25 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 102.19 E-value: 1.03e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1721 QIHLFSEPQFQGHSQSFEETTSQIDDSF---STKSCRVSGGSWVVYDGENFTGNQYVLEEGHYPCLSAMGCpPGATFKSL 1797
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGfnsRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGA-PNDRIGSL 79
|
...
gi 2462606408 1798 RFI 1800
Cdd:pfam00030 80 RPI 82
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1429-1510 |
2.58e-25 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 101.03 E-value: 2.58e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1429 HIDLFTEPEGLGILSSYFDDTEEMQGFGVMQKTCSMKVHWGTWLIYEEPGFQGVPFILEPGEYPDLSFWDTEAAYIGSMR 1508
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRIGSLR 80
|
..
gi 2462606408 1509 PL 1510
Cdd:pfam00030 81 PI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1625-1708 |
1.62e-23 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 96.04 E-value: 1.62e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1625 HMIMYSEKNFGskGSSIDVLGIVANLKETGYGVKTQSINVLSGVWVAYENPDFTGEQYILDKGFYTSFEDWGGKNCKISS 1704
Cdd:smart00247 1 KITLYEDENFQ--GRSYELSDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNDQISS 78
|
....
gi 2462606408 1705 VQPI 1708
Cdd:smart00247 79 IRRI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1429-1510 |
7.46e-21 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 88.33 E-value: 7.46e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1429 HIDLFTEPEGLGILSSYFDDTEEMQGFGVMQKTCSMKVHWGTWLIYEEPGFQGVPFILEPGEYPDLSFWDTEAAYIGSMR 1508
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNDQISSIR 80
|
..
gi 2462606408 1509 PL 1510
Cdd:smart00247 81 RI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1721-1800 |
1.29e-20 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 87.95 E-value: 1.29e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1721 QIHLFSEPQFQGHSQSFEETTSQIDDSFS---TKSCRVSGGSWVVYDGENFTGNQYVLEEGHYPCLSAMGcPPGATFKSL 1797
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDCPSLQDYGSrdnVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWG-GFNDQISSI 79
|
...
gi 2462606408 1798 RFI 1800
Cdd:smart00247 80 RRI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1328-1419 |
3.90e-18 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 80.63 E-value: 3.90e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1328 KVVIYSEPDVSEKCIEVFSD---IQDCSSWSLspVILIKVVRGCWILYEQPNFEGHSIPLEEGELELSGLWGiedilerh 1404
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDcpsLQDYGSRDN--VSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWG-------- 70
|
90
....*....|....*
gi 2462606408 1405 eeAESDKpvvIGSIR 1419
Cdd:smart00247 71 --GFNDQ---ISSIR 80
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1328-1421 |
2.48e-13 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 67.13 E-value: 2.48e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1328 KVVIYSEPDVSEKCIEVFSDIQDCSSWSLSPVIL-IKVVRGCWILYEQPNFEGHSIPLEEGELELSGLWGiedilerhee 1406
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGFNSRVNsIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWG---------- 70
|
90
....*....|....*
gi 2462606408 1407 AESDKpvvIGSIRHV 1421
Cdd:pfam00030 71 APNDR---IGSLRPI 82
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
89-518 |
1.90e-12 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 72.90 E-value: 1.90e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 89 EAEGELPESGGPAAPPDAELSPRWSSS---------AAAVAVQQCHENDSPQLEPLEAEGEPFPDATTTAKQLHSSPGNS 159
Cdd:PHA03307 14 AAEGGEFFPRPPATPGDAADDLLSGSQgqlvsdsaeLAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLS 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 160 SRQENAETPARSPGEDASPGAgheqeaflgvrgaPGSPTQERPAGGLGEAPNGAPSVCAEEGSLGPRNARSQPrkgasdL 239
Cdd:PHA03307 94 TLAPASPAREGSPTPPGPSSP-------------DPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPP------A 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 240 PGEPPAEGAAHTASSAQA-------DCTARPKGHAHPAKVLtldiyLSKTEGAQVDEPVVITPRAEDCGDWDDMEKRSSG 312
Cdd:PHA03307 155 AGASPAAVASDAASSRQAalplsspEETARAPSSPPAEPPP-----STPPAAASPRPPRRSSPISASASSPAPAPGRSAA 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 313 RRSGRRRGSQKSTDSPGADAELPESAARDDAVFDD---EVAPNAASDNASAEKKVKSPRAAlDGGVASAASPESKPSPGT 389
Cdd:PHA03307 230 DDAGASSSDSSSSESSGCGWGPENECPLPRPAPITlptRIWEASGWNGPSSRPGPASSSSS-PRERSPSPSPSSPGSGPA 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 390 KGQLRGESDRSKQPPPASSPTKRKGRSRALEAVPAPPASGpRAPAKESPPKRVPDPSPVTKGTAAESGEEAARAIPRELP 469
Cdd:PHA03307 309 PSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPS-RSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTR 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 2462606408 470 VKSSSLLPEIKpehkrgpLPNHFNGRAEGGRSRELGRAA-GAPGASDADG 518
Cdd:PHA03307 388 RRARAAVAGRA-------RRRDATGRFPAGRPRPSPLDAgAASGAFYARY 430
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
79-488 |
5.23e-12 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 71.74 E-value: 5.23e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 79 EEGSPRENPREAEGELPE-----SGGPAAPPDAELSPRWSSSAAAVAVQQCHEND----SPQLEPLEAEGEPFPDATTTA 149
Cdd:PHA03307 16 EGGEFFPRPPATPGDAADdllsgSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGpppgPGTEAPANESRSTPTWSLSTL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 150 KQLHSSPGNSSRQENAET-----PARSPGEDASPGAGHEQEAFLGVRGAPGSPTQERPAGGLGEAPNGAPSVCAEEGSL- 223
Cdd:PHA03307 96 APASPAREGSPTPPGPSSpdpppPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALp 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 224 ---GPRNARSqPRKGASDLPGEPPAEGAAHT--------ASSAQADCTARPKGHAHPAKVLTLDiyLSKTEGAQVDEpvv 292
Cdd:PHA03307 176 lssPEETARA-PSSPPAEPPPSTPPAAASPRpprrsspiSASASSPAPAPGRSAADDAGASSSD--SSSSESSGCGW--- 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 293 iTPRAEdCGDWDDMEKRSSGRRSGRRRGSQKSTDSPGADAELPESAARDDAVFDDEVAPNAASDNASAEKKVKSPRAALD 372
Cdd:PHA03307 250 -GPENE-CPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSS 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 373 GGVASAASPESKPSPGTKGQLRGESDRSKQPPPASSPTKRKGRSRaleavpAPPASGPRAPAKESPPKRVPDPSPvtKGT 452
Cdd:PHA03307 328 STSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPS------RAPSSPAASAGRPTRRRARAAVAG--RAR 399
|
410 420 430
....*....|....*....|....*....|....*.
gi 2462606408 453 AAESGEEAARAIPRELPVKSSSLLPEIKPehkRGPL 488
Cdd:PHA03307 400 RRDATGRFPAGRPRPSPLDAGAASGAFYA---RYPL 432
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
202-467 |
9.79e-11 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 67.18 E-value: 9.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 202 PAGGLGEAPNGAPSVCAEEGSLGPRnARSQPRKGASDLPGEPPAEGAAHTA----SSAQADCTARPKGHAHPAKVLTldi 277
Cdd:PRK07003 360 PAVTGGGAPGGGVPARVAGAVPAPG-ARAAAAVGASAVPAVTAVTGAAGAAlapkAAAAAAATRAEAPPAAPAPPAT--- 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 278 ylskteGAQVDEPVVITPRAEDCGDWDDMEKRSSGRRSGRRRGSQKSTDSPGADAelPESAARDDAVFDDEVAPNAASDN 357
Cdd:PRK07003 436 ------ADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDA--PPDAAFEPAPRAAAPSAATPAAV 507
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 358 ASAEKKVKSPRAaldggvaSAASPESKPSPgtkgqlrgesdRSKQP-PPASSPTKRKG-------------------RSR 417
Cdd:PRK07003 508 PDARAPAAASRE-------DAPAAAAPPAP-----------EARPPtPAAAAPAARAGgaaaaldvlrnagmrvssdRGA 569
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2462606408 418 ALEAVPAPPASGPRAPAKESPPKRVPDPSPVTKGTAAES-GEEAARAIPRE 467
Cdd:PRK07003 570 RAAAAAKPAAAPAAAPKPAAPRVAVQVPTPRARAATGDApPNGAARAEQAA 620
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
79-502 |
2.38e-10 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 66.50 E-value: 2.38e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 79 EEGSPReNPREAEGELPESGGPAAPPDAELSPRWSSSAAAVavqqcHENDSPQLEPLEAEGEPFPDATttakqlhSSPGN 158
Cdd:PHA03247 2594 QSARPR-APVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSP-----AANEPDPHPPPTVPPPERPRDD-------PAPGR 2660
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 159 SSRQENAETPARSPGEDASPGAGHEQEAFLGVrgAPGSPTQERPAGGLGEAPNGAPSVCAEEGSLGPRNARSQPRKGASD 238
Cdd:PHA03247 2661 VSRPRRARRLGRAAQASSPPQRPRRRAARPTV--GSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAA 2738
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 239 LPGEPPAEGAAHTASSAQADCTARPKGHAHPAkvltldiylsktegAQVDEPVVITPRAedcgdwddmekrssgrrsgrr 318
Cdd:PHA03247 2739 PAPPAVPAGPATPGGPARPARPPTTAGPPAPA--------------PPAAPAAGPPRRL--------------------- 2783
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 319 rgsqkstdSPGADAELPESAARDDAVFDDEVAPNAASDNASAEKKVKSPRAALDGGVASAASPESKPSP------GTKGQ 392
Cdd:PHA03247 2784 --------TRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGppppslPLGGS 2855
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 393 LRGESDRSKQPPPASSPTK-------------RKGRSRALEAVPAPPASGPRAPAKESPPKRVPDPSPVTKGTAAESGEE 459
Cdd:PHA03247 2856 VAPGGDVRRRPPSRSPAAKpaaparppvrrlaRPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPP 2935
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 2462606408 460 AARAIPRELPVKSSSLLPEIKPEHKRGPLPNHFNGRAEGGRSR 502
Cdd:PHA03247 2936 PPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFR 2978
|
|
| beta-trefoil_Ricin_GllA-1 |
cd23454 |
GllA-1 domain, beta-trefoil fold, found in Mucor circinelloides Gellins and similar proteins; ... |
1894-2009 |
5.89e-10 |
|
GllA-1 domain, beta-trefoil fold, found in Mucor circinelloides Gellins and similar proteins; Gellin proteins act as central effectors of wound-induced protoplasmic gelation. They possess ten related N-terminal beta-trefoil domains (Gll-1 to Gll-10) that contribute to distinct gelation-related activities. The beta-trefoil domains show low sequence similarity to members of the functionally diverse ricin B lectin domain family. They are characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain bears a potential sugar binding site. Gellin from M. circinelloides has been called GellinA (also known as GllA). The model corresponds to GllA-1 domain, which is a remote family member of the ricin B-type lectin domain.
Pssm-ID: 467332 [Multi-domain] Cd Length: 136 Bit Score: 59.25 E-value: 5.89e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1894 YFRLRNKATGLFMSTNGNLEDLK---LLRIQVMEDVgaDDQIWIYQEGCIkCRIAEDCCLTIVGSLVTSGSKLGL---AL 1967
Cdd:cd23454 2 WFFIKSSSNGLVLDVEHGSLKSGakvVLAPLKTKDY--ESQLWRYDDGYL-VNKASGLVLDIQGGVVKSGTRLVQspkKP 78
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 2462606408 1968 DQNADSQFWSLKSDGRIYSKLKPNLVLDIKGGTQYDQNHIIL 2009
Cdd:cd23454 79 SKDANNQRWGLTADGYIYLLSNPSLVLGIKGNETREGARVIL 120
|
|
| RICIN |
smart00458 |
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. |
1899-2021 |
1.03e-09 |
|
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication.
Pssm-ID: 214672 [Multi-domain] Cd Length: 118 Bit Score: 57.91 E-value: 1.03e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1899 NKATGLFMSTNGNLedlklLRIQVMEDVGADD-QIWIY-QEGCIKCRiAEDCCLTIVGSLvtsGSKLGLALDQN-ADSQF 1975
Cdd:smart00458 3 SGNTGKCLDVNGNK-----NPVGLFDCHGTGGnQLWKLtSDGAIRIK-DTDLCLTANGNT---GSTVTLYSCDGtNDNQY 73
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 2462606408 1976 WSLKSDGRIYSkLKPNLVLDIKGGTqyDQNHIILNTVSKEKfTQVW 2021
Cdd:smart00458 74 WEVNKDGTIRN-PDSGKCLDVKDGN--TGTKVILWTCSGNP-NQKW 115
|
|
| beta-trefoil_Ricin-like |
cd00161 |
ricin B-type lectin domain, beta-trefoil fold; The ricin B-type lectin domain is a ... |
1894-2021 |
4.07e-09 |
|
ricin B-type lectin domain, beta-trefoil fold; The ricin B-type lectin domain is a carbohydrate-binding domain formed from presumed gene triplication. It shows a beta-trefoil fold characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. The ricin B-type lectin domain was originally found in Ricin, which is a legume lectin from the seeds of the castor bean plant, Ricinus communis. It is also found in many carbohydrate-recognition proteins like plant and bacterial AB-toxins, glycosidases, or proteases, which serve diverse functions such as inhibitory toxicity, enzymatic activity, and signal transduction. The ricin B-type lectin domain can be present in one or more copies and has been shown in some instances to bind simple sugars, such as galactose or lactose. The most characteristic, though not completely conserved, sequence feature is the presence of a Q-W pattern. Consequently, the ricin B-type lectin domain has also been referred as the (QxW)3 domain and the three homologous regions as the QxW repeats. A disulfide bond is also conserved in some QxW repeats.
Pssm-ID: 467293 [Multi-domain] Cd Length: 134 Bit Score: 56.61 E-value: 4.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1894 YFRLRNKATGLFMS-TNGNLEDLKllRIQVMEDVGADDQIWIYQE-----GCIKCRiAEDCCLTIVGSLVTSGSKLGLAL 1967
Cdd:cd00161 2 TYRIVNAASGKCLDvAGGSTANGA--PVQQWTCNGGANQQWTLTPvgdgyYTIRNV-ASGKCLDVAGGSTANGANVQQWT 78
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 2462606408 1968 DQNADSQFWSLKSDGRIYSKLKP---NLVLDIKGGTQYDQNHIILNTVSKEKfTQVW 2021
Cdd:cd00161 79 CNGGDNQQWRLEPVGDGYYRIVNkhsGKCLDVSGGSTANGANVQQWTCNGGA-NQQW 134
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
80-471 |
3.58e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 58.84 E-value: 3.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 80 EGSPRENPREAEGelPESGGPAAPPDAELSPRWSSSAAAVAVQQCHEnDSPQLEPLEAEGEPFPDATTTAkqlhSSPGNS 159
Cdd:PRK07764 413 AAAAPAAAAAPAP--AAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPP-PAAAPSAQPAPAPAAAPEPTAA----PAPAPP 485
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 160 SRQENAETPARSPGEDASPGAGH--------------------------EQEA-FLGVRGapGSPTQERPAGGLGEA--- 209
Cdd:PRK07764 486 AAPAPAAAPAAPAAPAAPAGADDaatlrerwpeilaavpkrsrktwailLPEAtVLGVRG--DTLVLGFSTGGLARRfas 563
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 210 PNGAPSVC--------------AEEGSLGPRNARSQPRKGASDLPGEPPAEGAAHTASSAQADcTARPKGHAHPAKvltl 275
Cdd:PRK07764 564 PGNAEVLVtalaeelggdwqveAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAA-PAPAGAAAAPAE---- 638
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 276 diylskTEGAQVDEPVVITPRAEDCGDWDDMEKRSSGRRSGRRrgsqkstDSPGADAELPESAARddavfddeVAPNAAS 355
Cdd:PRK07764 639 ------ASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGG-------AAPAAPPPAPAPAAP--------AAPAGAA 697
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 356 DNASAEKKVKSPRAAldggvaSAASPESKPSPGTKGQLRGESDRSKQPPPASSPTKRKGRSRALEAVPAPPASGPRAPAK 435
Cdd:PRK07764 698 PAQPAPAPAATPPAG------QADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPA 771
|
410 420 430
....*....|....*....|....*....|....*.
gi 2462606408 436 ESPPKRVPDPSPVTKGTAAESGEEAARAIPRELPVK 471
Cdd:PRK07764 772 AAPPPSPPSEEEEMAEDDAPSMDDEDRRDAEEVAME 807
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
350-516 |
8.35e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 57.58 E-value: 8.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 350 APNAASDNASAEKKVKSPRAALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPASSPTKRKGRSRALEAVPAPPASG 429
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAP 454
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 430 PRAPA-KESPPKRVPDPSPVTKGTAAESGEEAARAIPRELPVKSSSLLPEIKPEHKRGPLPNHFNGRAEGGRSRELGRAA 508
Cdd:PRK12323 455 AAAPAaAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADP 534
|
....*...
gi 2462606408 509 GAPGASDA 516
Cdd:PRK12323 535 DDAFETLA 542
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
162-541 |
2.38e-07 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 55.84 E-value: 2.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 162 QENAETPARSPGEDASPGAGHEQEAFLGVRGAPGSPTQERPA-----GGLGEAPNGAPSVCAEEgsLGPRNARSQPRKGA 236
Cdd:COG5180 15 VPIPPNAARPVLSPELWAAANNDAVSQGDRSALASSPTRPYArkifePLDIKLALGKPQLPSVA--EPEAYLDPAPPKSS 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 237 SDLPGEPPAEGAAHTASSAQADCTARPKG-----HAHPAKVLTLDIYLSKTEGAQVD-EPVVITPRAEDcGDWDDMEKRS 310
Cdd:COG5180 93 PDTPEEQLGAPAGDLLVLPAAKTPELAAGalpapAAAAALPKAKVTREATSASAGVAlAAALLQRSDPI-LAKDPDGDSA 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 311 SGRRSGRRRGSQKSTDSPGADAELPESAARDDAVFDDEV---------APNAASDNASAEKKVKSP---RAALDGGVASA 378
Cdd:COG5180 172 STLPPPAEKLDKVLTEPRDALKDSPEKLDRPKVEVKDEAqeeppdltgGADHPRPEAASSPKVDPPstsEARSRPATVDA 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 379 ASPESKPSPGTKGQLRGESDRSKQPPPAS------------SPTKRKGRSRALEAV-PAPPASGPRAPAKESPPKRVPDP 445
Cdd:COG5180 252 QPEMRPPADAKERRRAAIGDTPAAEPPGLpvleagsepqsdAPEAETARPIDVKGVaSAPPATRPVRPPGGARDPGTPRP 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 446 SPVTKgTAAESGEEAARAIPRELPVKSSSLLPEIKPEHKRGPLPNHFNG-----RAEGGRSRELGRAAGAPGAsdADGLK 520
Cdd:COG5180 332 GQPTE-RPAGVPEAASDAGQPPSAYPPAEEAVPGKPLEQGAPRPGSSGGdgapfQPPNGAPQPGLGRRGAPGP--PMGAG 408
|
410 420
....*....|....*....|.
gi 2462606408 521 PRNHFGVGRSTVTTKVTLPAK 541
Cdd:COG5180 409 DLVQAALDGGGRETASLGGAA 429
|
|
| Ricin_B_lectin |
pfam00652 |
Ricin-type beta-trefoil lectin domain; |
1894-2021 |
8.86e-07 |
|
Ricin-type beta-trefoil lectin domain;
Pssm-ID: 395527 [Multi-domain] Cd Length: 126 Bit Score: 49.84 E-value: 8.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1894 YFRLRNKATGLFMSTNGNLEDLKLLRIQVMEDvGADDQIW-IYQEGCIKCRiAEDCCLTIVGSlvTSGSKLGLAL-DQNA 1971
Cdd:pfam00652 2 TGRIRNRASGKCLDVPGGSSAGGPVGLYPCHG-SNGNQLWtLTGDGTIRSV-ASDLCLDVGST--ADGAKVVLWPcHPGN 77
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 2462606408 1972 DSQFWSLKSDGR-IYSKlKPNLVLDIKGGTQyDQNHIILNTVSKEKFTQVW 2021
Cdd:pfam00652 78 GNQRWRYDEDGTqIRNP-QSGKCLDVSGAGT-SNGKVILWTCDSGNPNQQW 126
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
328-515 |
2.41e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 52.93 E-value: 2.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 328 PGAdaeLPESAARDDAVFDDEVAPNAASDNASAeKKVKSPRAALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPAS 407
Cdd:PRK07003 377 AGA---VPAPGARAAAAVGASAVPAVTAVTGAA-GAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAK 452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 408 SPTKRKGRSRALEAVPAPPAS--GPRAPAKESPPKRVPDPSPvtkgTAAESGEEAARAIPRELPVKSSSLLPEIKPEHKR 485
Cdd:PRK07003 453 ANARASADSRCDERDAQPPADsgSASAPASDAPPDAAFEPAP----RAAAPSAATPAAVPDARAPAAASREDAPAAAAPP 528
|
170 180 190
....*....|....*....|....*....|
gi 2462606408 486 GPLpnhfNGRAEGGRSRELGRAAGAPGASD 515
Cdd:PRK07003 529 APE----ARPPTPAAAAPAARAGGAAAALD 554
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
77-447 |
3.08e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 52.48 E-value: 3.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 77 TSEEGSPRENPREAEGELPESGGPAAPPDAELSPRWSSSAAAVAvqqchendSPQLEPLE-AEGEPFPDATTTAKqlhSS 155
Cdd:PHA03307 120 TPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVA--------SDAASSRQaALPLSSPEETARAP---SS 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 156 PGnssrqenAETPARSPGEDASPGAGHEQEAFLGVRGAPGSPTQERPAGGLGEAPNGAPSVCAEEGSLGPRNARSQPRKG 235
Cdd:PHA03307 189 PP-------AEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPA 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 236 ASDLPGePPAEGAAHTASSAQADCTarpkghahpakvltldiylSKTEGAQVDEPVViTPRAEDCGDWDdmekRSSGRRS 315
Cdd:PHA03307 262 PITLPT-RIWEASGWNGPSSRPGPA-------------------SSSSSPRERSPSP-SPSSPGSGPAP----SSPRASS 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 316 GRRRGSQKSTDSPGADAELPESAARDDAVFDDEVAPNAASDNASAEKKVKSPRAALDGGVASAASPESKPSPGTKGQLRG 395
Cdd:PHA03307 317 SSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAG 396
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 2462606408 396 ESDRSKQPPPASSPTKRKGRSRALEAVPAPPASGPRAPAKESPPKRVPDPSP 447
Cdd:PHA03307 397 RARRRDATGRFPAGRPRPSPLDAGAASGAFYARYPLLTPSGEPWPGSPPPPP 448
|
|
| Treacle |
pfam03546 |
Treacher Collins syndrome protein Treacle; |
154-635 |
4.36e-06 |
|
Treacher Collins syndrome protein Treacle;
Pssm-ID: 460967 [Multi-domain] Cd Length: 531 Bit Score: 51.61 E-value: 4.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 154 SSPGNSSRQEnaETPARSPGEDASPGAGHEQeaflgVRGApGSPTQERPAGGLGEAPNGAPSVCAEEGSLGPRNARSQPR 233
Cdd:pfam03546 27 SSEEESDSEE--ETPAAKTPLQAKPSGKTPQ-----VRAA-SAPAKESPRKGAPPVPPGKTGPAAAQAQAGKPEEDSESS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 234 KGASDLPGEPPAeGAAHTASSAQAdctaRPKG---HAHPAKVLTLDiylSKTEGAQVDEPVVITPRAedcgdwddmekrs 310
Cdd:pfam03546 99 SEESDSDGETPA-AATLTTSPAQV----KPLGknsQVRPASTVGKG---PSGKGANPAPPGKAGSAA------------- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 311 sGRRSGRRRGSQKSTDSPGADAELPESAARDDAVFDDEVAPNAASDNASAEKKVKSPRAAldGGVASAASPESkpSPGTK 390
Cdd:pfam03546 158 -PLVQVGKKEEDSESSSEESDSEGEAPPAATQAKPSGKILQVRPASGPAKGAAPAPPQKA--GPVATQVKAER--SKEDS 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 391 GQLRGESDRSKQPPPASSPTKRKGRSRALEAVPAPPASGPRAPAK-ESPPKRVPDPSPVTKGTAAESGEEAARAIPR--E 467
Cdd:pfam03546 233 ESSEESSDSEEEAPAAATPAQAKPALKTPQTKASPRKGTPITPTSaKVPPVRVGTPAPWKAGTVTSPACASSPAVARgaQ 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 468 LPVKSSSLLPEIKPEHKRGPLPNhfNGRAEGGRSRELGRAAGAPGAsdadglkprnhfgvGRSTVTTKVTLPAKPKHVEL 547
Cdd:pfam03546 313 RPEEDSSSSEESESEEETAPAAA--VGQAKSVGKGLQGKAASAPTK--------------GPSGQGTAPVPPGKTGPAVA 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 548 NLKTPKNLDSLGNEHNPFSQP--VHKGNTATKISLFENKRTNSSPRHTDIRGQRNTPASSKTFVGRAKLNLAKKAKemeq 625
Cdd:pfam03546 377 QVKAEAQEDSESSEEESDSEEaaATPAQVKASGKTPQAKANPAPTKASSAKGAASAPGKVVAAAAQAKQGSPAKVK---- 452
|
490
....*....|
gi 2462606408 626 PEKKVMPNSP 635
Cdd:pfam03546 453 PPARTPQNSA 462
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
327-521 |
1.45e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 50.26 E-value: 1.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 327 SPGADAELPESAARDDAVFDDEVAPNAASDNAS-AEKKVKSPRAALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPP 405
Cdd:PRK12323 373 GPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAApAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAP 452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 406 ASSPTKRKGRSRALEAVPAPPASGPRAPAKESP---PKRVPD------------PSPVTKGTAAESGEEAARAIPRELPV 470
Cdd:PRK12323 453 APAAAPAAAARPAAAGPRPVAAAAAAAPARAAPaaaPAPADDdpppweelppefASPAPAQPDAAPAGWVAESIPDPATA 532
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2462606408 471 KSSSLLPEIKPEHKRGPLPnhfngRAEGGRSRelgRAAGAPGASDADGLKP 521
Cdd:PRK12323 533 DPDDAFETLAPAPAAAPAP-----RAAAATEP---VVAPRPPRASASGLPD 575
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
88-760 |
2.96e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.55 E-value: 2.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 88 REAEGELPESGGPA------APPDAELSPRWSSSAaavavqqchendsPQLEPLEAEGEPFPDATTTakQLHSSPGNSSR 161
Cdd:PHA03247 2482 RPAEARFPFAAGAApdpgggGPPDPDAPPAPSRLA-------------PAILPDEPVGEPVHPRMLT--WIRGLEELASD 2546
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 162 QENAETPARSPgeDASPGAGHeqeaflgvRGAPGSPTQERPAGGLGEAPNGAPSVCAEEGS-LGPRNARSQPRKGASDLP 240
Cdd:PHA03247 2547 DAGDPPPPLPP--AAPPAAPD--------RSVPPPRPAPRPSEPAVTSRARRPDAPPQSARpRAPVDDRGDPRGPAPPSP 2616
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 241 GEPPAEGAAHTASSAQADCTARPKGHAHPAKVLTLDIYLSKteGAQVDEPVVITPRAEDCGDWDDMEKRSSGRRSGRRRG 320
Cdd:PHA03247 2617 LPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPA--PGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGS 2694
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 321 SQKSTDSPGADAElPESAarddavfddevaPNAASdnaSAEKKVKSPRAALDGGVASAASPESKPSPGTKGQLRGESDRS 400
Cdd:PHA03247 2695 LTSLADPPPPPPT-PEPA------------PHALV---SATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPA 2758
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 401 KQPPPASSPTKRKGRSRALEAVPA--PPASGPRAPAKES-PPKRVPDPSPVTKGTAAESGEEAARAIPRELPVKSSSLLP 477
Cdd:PHA03247 2759 RPPTTAGPPAPAPPAAPAAGPPRRltRPAVASLSESRESlPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTA 2838
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 478 EIKPEhkrGPLPNHF---NGRAEGGRSRELGrAAGAPGASDADGLKPRnhfgvgrstvTTKVTLPAKPKHVELNLKTPkn 554
Cdd:PHA03247 2839 PPPPP---GPPPPSLplgGSVAPGGDVRRRP-PSRSPAAKPAAPARPP----------VRRLARPAVSRSTESFALPP-- 2902
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 555 lDSLGNEHNPFSQPvhkgntatkislfenkrtnsSPRHTDIRGQRNTPASSKTFVGRAKLNLAKKAKEMEQPEKKVMPNS 634
Cdd:PHA03247 2903 -DQPERPPQPQAPP--------------------PPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQ 2961
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 635 PQNGVLVKETAIETKVTVSEeeilpatrgmNGDSSENQALGPQPNQDDKAD-VQTDAGCLSEPVASALIPVK-DHKLLEK 712
Cdd:PHA03247 2962 PWLGALVPGRVAVPRFRVPQ----------PAPSREAPASSTPPLTGHSLSrVSSWASSLALHEETDPPPVSlKQTLWPP 3031
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|
gi 2462606408 713 EDSEAADSKSLVLEN--VTDTAQDIPTTVDTKDlPPTAMPKPQHTFSDSQ 760
Cdd:PHA03247 3032 DDTEDSDADSLFDSDseRSDLEALDPLPPEPHD-PFAHEPDPATPEAGAR 3080
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
335-468 |
4.20e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.56 E-value: 4.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 335 PESAARDDAVfddevAPNAASDNASAEKKVKSPRAALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPASSPTKRKG 414
Cdd:PRK14951 366 PAAAAEAAAP-----AEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAA 440
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 2462606408 415 RSRALEAVPAPPAsgPRAPAKESPPKRV-PDPSPVTKGTAAESGEEAARAIPREL 468
Cdd:PRK14951 441 APAAVALAPAPPA--QAAPETVAIPVRVaPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
351-470 |
5.11e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.17 E-value: 5.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 351 PNAASDNASAEKK-VKSPRAAldggvASAASPESKPSPGTKGQLRGESDRSKQPPPASSPTKRKGRSRALEAVPAPPASG 429
Cdd:PRK14951 367 AAAAEAAAPAEKKtPARPEAA-----APAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAA 441
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 2462606408 430 P--RAPAKESPPKRVPDPSPVTKGTAAESGEEAARAIPRELPV 470
Cdd:PRK14951 442 PaaVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPA 484
|
|
| valS |
PRK14900 |
valyl-tRNA synthetase; Provisional |
335-486 |
5.57e-05 |
|
valyl-tRNA synthetase; Provisional
Pssm-ID: 237855 [Multi-domain] Cd Length: 1052 Bit Score: 48.45 E-value: 5.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 335 PESAARDDAVFDDEVAPNAASDNASAEKKVKSPRA-ALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPASsptkrk 413
Cdd:PRK14900 908 ANSARRDTMEIQNEQKPTQDGPAAEAQPAQENTVVeSAEKAVAAVSEAAQQAATAVASGIEKVAEAVRKTVRRS------ 981
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462606408 414 grsrALEAvPAPPASGPR-----APAKESPPKRVPDPSPVTKGTAAEsgEEAARAIPRELPVKSSSLLPEIKPEHKRG 486
Cdd:PRK14900 982 ----VKKA-AATRAAMKKkvakkAPAKKAAAKKAAAKKAAAKKKVAK--KAPAKKVARKPAAKKAAKKPARKAAGRKA 1052
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
338-525 |
6.35e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 48.24 E-value: 6.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 338 AARD--DAVFDDevapnaASDNASAEKKVKSPRAALDGGVASAASPEskPSPGTKGQLRGESDRSKQPPPASSPTKRKGR 415
Cdd:PHA03307 749 SAWDitDALFSN------PSLVPAKLAEALALLEPAEPQRGAGSSPP--VRAEAAFRRPGRLRRSGPAADAASRTASKRK 820
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 416 SRaleavPAPPASGPRAPAKESPPKRVPDPSPVTKGTAAESGEEAARAIPRELPVKSSSLLPEIKPEHKRGPLPNHFNGR 495
Cdd:PHA03307 821 SR-----SHTPDGGSESSGPARPPGAAARPPPARSSESSKSKPAAAGGRARGKNGRRRPRPPEPRARPGAAAPPKAAAAA 895
|
170 180 190
....*....|....*....|....*....|..
gi 2462606408 496 AEGGRSRELGRAAGAP--GASDADGLKPRNHF 525
Cdd:PHA03307 896 PPAGAPAPRPRPAPRVklGPMPPGGPDPRGGF 927
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
335-473 |
9.38e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 47.40 E-value: 9.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 335 PESAARDDAVFDDEVAPNAASDNASAEK----KVKSPRAALDGGVASAASPESK--PSPGTKGQLRGESDRSKQPPPASS 408
Cdd:PRK08691 360 PLAAASCDANAVIENTELQSPSAQTAEKetaaKKPQPRPEAETAQTPVQTASAAamPSEGKTAGPVSNQENNDVPPWEDA 439
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2462606408 409 PTKrkgrsralEAVPAPPASGPRAPAKESPPKRVPDPSPVTKGTAAESGEEAARA-IPRELPVKSS 473
Cdd:PRK08691 440 PDE--------AQTAAGTAQTSAKSIQTASEAETPPENQVSKNKAADNETDAPLSeVPSENPIQAT 497
|
|
| beta-trefoil_Ricin_GllA-1 |
cd23454 |
GllA-1 domain, beta-trefoil fold, found in Mucor circinelloides Gellins and similar proteins; ... |
1940-2022 |
1.16e-04 |
|
GllA-1 domain, beta-trefoil fold, found in Mucor circinelloides Gellins and similar proteins; Gellin proteins act as central effectors of wound-induced protoplasmic gelation. They possess ten related N-terminal beta-trefoil domains (Gll-1 to Gll-10) that contribute to distinct gelation-related activities. The beta-trefoil domains show low sequence similarity to members of the functionally diverse ricin B lectin domain family. They are characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain bears a potential sugar binding site. Gellin from M. circinelloides has been called GellinA (also known as GllA). The model corresponds to GllA-1 domain, which is a remote family member of the ricin B-type lectin domain.
Pssm-ID: 467332 [Multi-domain] Cd Length: 136 Bit Score: 43.84 E-value: 1.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1940 IKCrIAEDCCLTIVGSLVTSGSKLGLA--LDQNADSQFWSLKsDGRIYSKlKPNLVLDIKGGTQYDQNHIILNTVS--KE 2015
Cdd:cd23454 5 IKS-SSNGLVLDVEHGSLKSGAKVVLAplKTKDYESQLWRYD-DGYLVNK-ASGLVLDIQGGVVKSGTRLVQSPKKpsKD 81
|
....*..
gi 2462606408 2016 KFTQVWE 2022
Cdd:cd23454 82 ANNQRWG 88
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
327-470 |
1.19e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 47.47 E-value: 1.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 327 SPGADAELPESAARDDAVFDDEVAPNAASDNASAEKKVKSPRAALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPA 406
Cdd:PHA03307 785 GSSPPVRAEAAFRRPGRLRRSGPAADAASRTASKRKSRSHTPDGGSESSGPARPPGAAARPPPARSSESSKSKPAAAGGR 864
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462606408 407 SSPTKRKGRSRALEAVPAPPASGPR----APAKESPPKRVPDPSPVTKGTAAESGEEAARAIPRELPV 470
Cdd:PHA03307 865 ARGKNGRRRPRPPEPRARPGAAAPPkaaaAAPPAGAPAPRPRPAPRVKLGPMPPGGPDPRGGFRRVPP 932
|
|
| PRK12495 |
PRK12495 |
hypothetical protein; Provisional |
338-463 |
2.78e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 183558 [Multi-domain] Cd Length: 226 Bit Score: 44.47 E-value: 2.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 338 AARDDAVFDDEVAPNAASDNASAEKKVKSPRAALDGGVASAASPESKPSPGTkgqlRGESDRSKQPPPASSPTkRKGRSR 417
Cdd:PRK12495 68 VTEDGAAGDDAGDGAEATAPSDAGSQASPDDDAQPAAEAEAADQSAPPEASS----TSATDEAATDPPATAAA-RDGPTP 142
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 2462606408 418 ALEAVPAPPAsgPRAPAKESPPKRVPDPSPVTKGTAAESGEEAARA 463
Cdd:PRK12495 143 DPTAQPATPD--ERRSPRQRPPVSGEPPTPSTPDAHVAGTLQAARE 186
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
345-471 |
3.18e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.04 E-value: 3.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 345 FDDEVAPNAASDNASAEkkvksprAALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPASSPtkrkgrsralEAVPA 424
Cdd:PRK12270 33 FADYGPGSTAAPTAAAA-------AAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAA----------AAAAA 95
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 2462606408 425 PPASGPRAPAKESPPKRVPDPSPVTKGTAAESGE--EAARAIP-----RELPVK 471
Cdd:PRK12270 96 PAAPPAAAAAAAPAAAAVEDEVTPLRGAAAAVAKnmDASLEVPtatsvRAVPAK 149
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
199-539 |
3.76e-04 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 45.83 E-value: 3.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 199 QERPAGGLGE---APNGAPSVcAEEGSLGPRNA-RSQPRKGASDLPGEPpaegaahtASSAQADCTARPKGHAHPAKVLT 274
Cdd:PHA03378 562 QLLPAPGLGPlqiQPLTSPTT-SQLASSAPSYAqTPWPVPHPSQTPEPP--------TTQSHIPETSAPRQWPMPLRPIP 632
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 275 LdiYLSKTEGAQVDEPVVITPraedcgDWDDMEKRSSGRRSGRRRGSQKSTDSP-GADAELPESAARDDAVfDDEVAPNA 353
Cdd:PHA03378 633 M--RPLRMQPITFNVLVFPTP------HQPPQVEITPYKPTWTQIGHIPYQPSPtGANTMLPIQWAPGTMQ-PPPRAPTP 703
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 354 ASDNASAEKKVKSPRAALDGGVASAASPESKPSPgtkgqlrgESDRSKQPPPASSPTKRKGRSRALEAVPaPPASGPRAP 433
Cdd:PHA03378 704 MRPPAAPPGRAQRPAAATGRARPPAAAPGRARPP--------AAAPGRARPPAAAPGRARPPAAAPGRAR-PPAAAPGAP 774
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 434 AKESPPKrVPdPSPVTKGTAAESGEEAARAIPRELPVKSSSLLPEIKPehKRGPLPNHFNGRAEGGRSRELGRAAGAPGA 513
Cdd:PHA03378 775 TPQPPPQ-AP-PAPQQRPRGAPTPQPPPQAGPTSMQLMPRAAPGQQGP--TKQILRQLLTGGVKRGRPSLKKPAALERQA 850
|
330 340
....*....|....*....|....*.
gi 2462606408 514 sdADGLKPRNHFGVGRSTVTTKVTLP 539
Cdd:PHA03378 851 --AAGPTPSPGSGTSDKIVQAPVFYP 874
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
76-217 |
3.97e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 44.96 E-value: 3.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 76 DTSEEGSPRENPREAEGELPESGGPAAPPDAELSPRWSSSAAAvavQQCHEnDSPQlEPLEAEGEPFPDA-------TTT 148
Cdd:PHA03169 125 GSSPESPASHSPPPSPPSHPGPHEPAPPESHNPSPNQQPSSFL---QPSHE-DSPE-EPEPPTSEPEPDSpgppqseTPT 199
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462606408 149 AKQLHSSPGNSSRQENAETPARSPGEDASPGAGHEQEAFLGVRGAPGSPTQERPA---GGLGEA--PNGAPSVC 217
Cdd:PHA03169 200 SSPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEHEDEPTEPEREGPPFPGHRSHSytvVGWKPStrPGGVPKLC 273
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
327-553 |
5.88e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 45.31 E-value: 5.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 327 SPGADAeLPESAARDDAVFDD--------------EVAPNAASDNASAEKKVKS-PRAALDGGVASAASPESKPSPG--- 388
Cdd:PHA03247 2438 SPGGDV-LAGLAADGDPFFARtilgapfslslllgELFPGAPVYRRPAEARFPFaAGAAPDPGGGGPPDPDAPPAPSrla 2516
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 389 -------TKGQ---------LRG----ESDRSKQPPPassptkrkgrsraleavPAPPASGPRAPAKESPPKR-VPDPS- 446
Cdd:PHA03247 2517 pailpdePVGEpvhprmltwIRGleelASDDAGDPPP-----------------PLPPAAPPAAPDRSVPPPRpAPRPSe 2579
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 447 PVTKGTAAESGEEAARAIPReLPVKSS-----SLLPEIKPEHKRGPLPNHFNGRAEGGRSRELGRAAGAPGAsdadglKP 521
Cdd:PHA03247 2580 PAVTSRARRPDAPPQSARPR-APVDDRgdprgPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPE------RP 2652
|
250 260 270
....*....|....*....|....*....|..
gi 2462606408 522 RNHFGVGRSTVTTKVTLPAKPKHVELNLKTPK 553
Cdd:PHA03247 2653 RDDPAPGRVSRPRRARRLGRAAQASSPPQRPR 2684
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
226-547 |
6.34e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 45.31 E-value: 6.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 226 RNARSQPRKGASDLPGEPP--AEGAAHTASSAQADCTARPK---GHAHPAKVLTLDIYLSKTEGAQVDEPVVITP----R 296
Cdd:PHA03247 241 RVVISHPLRGDIAAPAPPPvvGEGADRAPETARGATGPPPPpeaAAPNGAAAPPDGVWGAALAGAPLALPAPPDPpppaP 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 297 AEDCGDWDDMEKRSSGRRSGRRRGSQKSTDSPGADAEL--PESAARDdaVFDDEVAPNAASDNASAEK---KVKSPRAAL 371
Cdd:PHA03247 321 AGDAEEEDDEDGAMEVVSPLPRPRQHYPLGFPKRRRPTwtPPSSLED--LSAGRHHPKRASLPTRKRRsarHAATPFARG 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 372 DGG----VASAASPESKPSPGTKGQLRGESDRSKQPPPASSPTKRKGRSRALEAVPAPPASGPRAPA-KESPPK------ 440
Cdd:PHA03247 399 PGGddqtRPAAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDpDDATRKaldalr 478
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 441 --RVPDPS-----------PVTKGTAAESGEEAArAIPRELPVKSSSLLPEIkpehkRGPLPNH----------FNGRA- 496
Cdd:PHA03247 479 erRPPEPPgadlaellgrhPDTAGTVVRLAAREA-AIAREVAECSRLTINAL-----RSPFPASpgllqhcvifLFERVl 552
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2462606408 497 ----EGGRSRELGRAAGAPGASDAD---GLKPRNHfGVGRSTVTTKVTLPAKPKHVEL 547
Cdd:PHA03247 553 afliENGARTHAGAGAEGPAAALLDltlSLLPRRT-AVGDFLASTRMTLADVAAHLPL 609
|
|
| beta-trefoil_Ricin_SCDase |
cd23456 |
ricin B-type lectin domain, beta-trefoil fold, found in Shewanella algae sphingolipid ceramide ... |
1894-2001 |
6.71e-04 |
|
ricin B-type lectin domain, beta-trefoil fold, found in Shewanella algae sphingolipid ceramide N-deacylase (SCDase) and similar proteins; SCDase (EC 3.5.1.69) is an enzyme which hydrolyzes the N-acyl linkage between fatty acid and sphingosine in ceramide of various glycosphingolipids and sphingomyelin. Shewanella algae SCDase contains two ricin B-type lectin domains at its C-terminus. The ricin B-type lectin domain shows a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket.
Pssm-ID: 467334 [Multi-domain] Cd Length: 122 Bit Score: 41.57 E-value: 6.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1894 YFRLRNKATGLFMSTNGNleDLKLLRIQVMEDVGADDQIWIYQE-GCIKCRIAEDCCLTiVGSLVTSGSKLGLALDQNAD 1972
Cdd:cd23456 2 YFQLKSQASGLCLDVSGG--ATNGANVVVYDCNNSNSQKWYYDAtGRLHSKANPGKCLD-AGGENSNGANVVLWACNDSA 78
|
90 100
....*....|....*....|....*....
gi 2462606408 1973 SQFWSLkSDGRIYSKLKPNLVLDIKGGTQ 2001
Cdd:cd23456 79 NQRWDF-DGNFIRSRNNTNLALDAYGSQG 106
|
|
| beta-trefoil_Ricin_HA17-like |
cd23445 |
ricin B-type lectin domain, beta-trefoil fold, found in Clostridium botulinum hemagglutinating ... |
1920-2010 |
7.93e-04 |
|
ricin B-type lectin domain, beta-trefoil fold, found in Clostridium botulinum hemagglutinating proteins, HA17 and HA33, and similar proteins; The subfamily includes Clostridium botulinum hemagglutinating proteins HA17 and HA33, Lysinibacillus sphaericus mosquitocidal toxin (MTX) and Pieris brassicae pierisin. The hemagglutinin (HA) component of the progenitor toxin protects the structural integrity of the neurotoxin. It may increase internalization of the neurotoxin into the bloodstream of the host. The hemagglutinin complex, composed of HA-70 (also known as HA3), HA-33 (also known as HA1) and HA-17 (also known as HA2), agglutinates erythrocytes, whereas the individual components do not. HA-33 is involved in recognition of cell-surface carbohydrates. HA-17 and HA-70 are involved in paracellular barrier disruption by E-cadherin binding. MTX acts as an ADP-ribosyl transferase. Pierisin, also called NAD--DNA ADP-ribosyltransferase, pierisin-2, or pierisin-B, catalyzes the ADP ribosylation of double-stranded DNA by targeting the N2 amino group of dG residues. It induces apoptosis in a range of human cell lines. Members of this subfamily contain at least one ricin B-type lectin domain with a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry.
Pssm-ID: 467323 [Multi-domain] Cd Length: 133 Bit Score: 41.54 E-value: 7.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1920 IQVMEDVGADDQIWI---------YQegcIKCRIAEDCCLTIVGSlvtSGSKLGLALDQNADSQFWSLK--SDGR--IYS 1986
Cdd:cd23445 24 VVLWDNNGGNNQKWRfeydsgknaYQ---IKNLDNTNLVLAWNSS---SSNNVFASTNTSKDEQYWKLEeaGDGYyiIKN 97
|
90 100
....*....|....*....|....
gi 2462606408 1987 KLKPNLVLDIKGGTQYDQNHIILN 2010
Cdd:cd23445 98 YADPNLVLDVEGSNTANGTNIIVY 121
|
|
| beta-trefoil_Ricin_SCDase |
cd23456 |
ricin B-type lectin domain, beta-trefoil fold, found in Shewanella algae sphingolipid ceramide ... |
1945-2005 |
9.23e-04 |
|
ricin B-type lectin domain, beta-trefoil fold, found in Shewanella algae sphingolipid ceramide N-deacylase (SCDase) and similar proteins; SCDase (EC 3.5.1.69) is an enzyme which hydrolyzes the N-acyl linkage between fatty acid and sphingosine in ceramide of various glycosphingolipids and sphingomyelin. Shewanella algae SCDase contains two ricin B-type lectin domains at its C-terminus. The ricin B-type lectin domain shows a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket.
Pssm-ID: 467334 [Multi-domain] Cd Length: 122 Bit Score: 41.19 E-value: 9.23e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462606408 1945 AEDCCLTIVGSlVTSGSKLGLALDQNADSQFWSLKSDGRIYSKLKPNLVLDIKGGTQYDQN 2005
Cdd:cd23456 9 ASGLCLDVSGG-ATNGANVVVYDCNNSNSQKWYYDATGRLHSKANPGKCLDAGGENSNGAN 68
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
370-516 |
1.03e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 44.07 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 370 ALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPASSPTKRKGRSRALEAVPAPPASGPRAPAKESPPKRVPDPspvt 449
Cdd:PRK07003 357 AFEPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAP---- 432
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462606408 450 kgtaAESGEEAARAIPRELPVKSSSLLP----EIKPEHKRGPLPNHFNGRAEGGRSRELGRAAGAPGASDA 516
Cdd:PRK07003 433 ----PATADRGDDAADGDAPVPAKANARasadSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAP 499
|
|
| beta-trefoil_Ricin_DCDC1 |
cd23427 |
ricin B-type lectin domain, beta-trefoil fold, found in doublecortin domain-containing protein ... |
1931-2024 |
1.15e-03 |
|
ricin B-type lectin domain, beta-trefoil fold, found in doublecortin domain-containing protein 1 (DCDC1) and similar proteins; DCDC1, also called doublecortin domain-containing 5 protein (DCDC5), is a microtubule-binding protein which plays an important role in mediating dynein-dependent transport of RAB8A-positive vesicles to the midbody during cytokinesis. In addition to doublecortin-like domains, DCDC1 may also contain a ricin B-type lectin domain in the middle region. The ricin B-type lectin domain shows a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a putative sugar-binding pocket.
Pssm-ID: 467305 Cd Length: 146 Bit Score: 41.52 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1931 QIWIYQEGCIKCRIAEDCCLTIVGSLVTSGSKLGLALDQNAD-SQFWSLKSDGRIYSKLKPNLVLDIK------GGTQ-- 2001
Cdd:cd23427 38 QQFVFEDGFISCCSNPNLVLGVQGSELGRGAEVVLVKKKPDDiNQRWILREDGHIMSKPNYDLVLTVSmpsttpGDSSsp 117
|
90 100
....*....|....*....|....*...
gi 2462606408 2002 --YDQNHIILNTVSKEKF---TQVWEAM 2024
Cdd:cd23427 118 lsYIGCAVILQKYKGYSYgraNQKWHWD 145
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
81-257 |
1.72e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 43.30 E-value: 1.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 81 GSPRENPREAEGELPESGGPAAPPDAELSPRWSSSAAAVAVQQCHENDSPQLEPLEAEGEPFPDATTTAKQLHSSPGNSS 160
Cdd:PRK07003 383 PGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSR 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 161 RQENAETPARSPgedaSPGAGHEQEAFLGVRGAPGSPTQERPAGGLGEAPNGAPSVCAEEGSLGPRNARSQPRKGasdlP 240
Cdd:PRK07003 463 CDERDAQPPADS----GSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEAR----P 534
|
170
....*....|....*..
gi 2462606408 241 GEPPAEGAAHTASSAQA 257
Cdd:PRK07003 535 PTPAAAAPAARAGGAAA 551
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
97-270 |
2.21e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 42.94 E-value: 2.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 97 SGGPAAPPDAELSPRWSSSAAAVAVQQChendSPQLEPLEAEGEPFPDATTTAKQLHSSPGnssrqenaetpARSPGEDA 176
Cdd:PRK12323 368 SGGGAGPATAAAAPVAQPAPAAAAPAAA----APAPAAPPAAPAAAPAAAAAARAVAAAPA-----------RRSPAPEA 432
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 177 SPGAGHEQEAFLGVRGAPGS-------PTQERPAGGLGEAPNGAPSVCAEEGSLGPRNARSQPRKGASDLPGEPPAEGAA 249
Cdd:PRK12323 433 LAAARQASARGPGGAPAPAPapaaapaAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPA 512
|
170 180
....*....|....*....|..
gi 2462606408 250 HT-ASSAQADCTARPKGHAHPA 270
Cdd:PRK12323 513 QPdAAPAGWVAESIPDPATADP 534
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
327-522 |
2.57e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.85 E-value: 2.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 327 SPGADAELPESAARDDAVFDDEVAPNAASDNASAEKKVKSPRAAldgGVASAASPESKPSPGTKGqlrgesdrsKQPPPA 406
Cdd:PHA03307 129 SPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQA---ALPLSSPEETARAPSSPP---------AEPPPS 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 407 SSPTKRKGRSRAleavPAPPASGPRAPAKESPPKRVPDPSPVTKGTAAES-------GEEAARAIPRELPVKSSSLLPEI 479
Cdd:PHA03307 197 TPPAAASPRPPR----RSSPISASASSPAPAPGRSAADDAGASSSDSSSSessgcgwGPENECPLPRPAPITLPTRIWEA 272
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2462606408 480 KPEHKRGPLPNHfngRAEGGRSRELGRAAgAPGASDADGLKPR 522
Cdd:PHA03307 273 SGWNGPSSRPGP---ASSSSSPRERSPSP-SPSSPGSGPAPSS 311
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
384-485 |
3.33e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 42.39 E-value: 3.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 384 KPSPGTKGQLRGESdRSKQPPPASSPTKRKGRSRALEAVPAPPASGPRAPAKESPPKRVPDPSPVTKGTAAESGEEAARA 463
Cdd:PRK14951 365 KPAAAAEAAAPAEK-KTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPA 443
|
90 100
....*....|....*....|..
gi 2462606408 464 IPRELPVKSSSLLPEIKPEHKR 485
Cdd:PRK14951 444 AVALAPAPPAQAAPETVAIPVR 465
|
|
| Treacle |
pfam03546 |
Treacher Collins syndrome protein Treacle; |
98-465 |
3.50e-03 |
|
Treacher Collins syndrome protein Treacle;
Pssm-ID: 460967 [Multi-domain] Cd Length: 531 Bit Score: 42.37 E-value: 3.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 98 GGPAAPPdaelsPRWSSSAAAVAVQQCHENDSPQLEPLEAEGEPfPDATTTAKQLHSSPGNSSRQENAETPARSPGEDAS 177
Cdd:pfam03546 144 GANPAPP-----GKAGSAAPLVQVGKKEEDSESSSEESDSEGEA-PPAATQAKPSGKILQVRPASGPAKGAAPAPPQKAG 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 178 PGAGHEQEAflgvRGAPGSPTQERPAGGLGEAPNGAPSVCAEEGSLGPRnARSQPRKGASDLP----------GEPPAEG 247
Cdd:pfam03546 218 PVATQVKAE----RSKEDSESSEESSDSEEEAPAAATPAQAKPALKTPQ-TKASPRKGTPITPtsakvppvrvGTPAPWK 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 248 AAHTASSAQADCTARPKGHAHPAKVLTLDiylSKTEGAQVDEPVVITPRAEDCGDwddMEKRSSGRRSGRRRGSQKSTDS 327
Cdd:pfam03546 293 AGTVTSPACASSPAVARGAQRPEEDSSSS---EESESEEETAPAAAVGQAKSVGK---GLQGKAASAPTKGPSGQGTAPV 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 328 P----GADAELPESAARDDAVFDDEVAPNAASDNASAEKK--VKSPRAALDGGVASAASPESKPSPGTKGQLRGESDRSK 401
Cdd:pfam03546 367 PpgktGPAVAQVKAEAQEDSESSEEESDSEEAAATPAQVKasGKTPQAKANPAPTKASSAKGAASAPGKVVAAAAQAKQG 446
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 402 QP----PPASSPTKRKGRSRALEAVPAP-PASGPRAPAKESPPKRVPDPSPVTKGTAAESGEEA-ARAIP 465
Cdd:pfam03546 447 SPakvkPPARTPQNSAISVRGQASVPAVgKAVATAAQAQKGPVGGPQEEDSESSEEESDSEEEApAQAKP 516
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
36-257 |
4.30e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.14 E-value: 4.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 36 ESPTRSNAKPLSPKDVVASPKLPERESERSRSQSSQLK----QTDTSEEGSPRENPREAEGELPESGGP--AAPPDAELS 109
Cdd:PRK07003 408 AALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGdapvPAKANARASADSRCDERDAQPPADSGSasAPASDAPPD 487
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 110 PRWSSSAAAVAVQQCHENDSPQLEPLEAegEPFPDATTTAkqlhSSPGNSSRQEnaetparSPGEDASPGAGHEQEAFLG 189
Cdd:PRK07003 488 AAFEPAPRAAAPSAATPAAVPDARAPAA--ASREDAPAAA----APPAPEARPP-------TPAAAAPAARAGGAAAALD 554
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462606408 190 VRGAPG---SPTQERPAGGlgeAPNGAPSVCAEEGSLGPRNARSQPRKGASDLPGEPPAEGAAHTASSAQA 257
Cdd:PRK07003 555 VLRNAGmrvSSDRGARAAA---AAKPAAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNGAARAEQAAES 622
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
369-480 |
4.64e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 42.10 E-value: 4.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 369 AALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPASSPTKRKGRSRAL-EAVPAPPASGPRAPAKESPPKRVPDPSP 447
Cdd:PRK14950 358 ALLVPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATpPPVPPRPVAPPVPHTPESAPKLTRAAIP 437
|
90 100 110
....*....|....*....|....*....|...
gi 2462606408 448 VtkGTAAESGEEAARAIPRELPVKSSSLLPEIK 480
Cdd:PRK14950 438 V--DEKPKYTPPAPPKEEEKALIADGDVLEQLE 468
|
|
| PHA03381 |
PHA03381 |
tegument protein VP22; Provisional |
396-477 |
4.65e-03 |
|
tegument protein VP22; Provisional
Pssm-ID: 177618 [Multi-domain] Cd Length: 290 Bit Score: 41.15 E-value: 4.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 396 ESDRSKQPPPASSPTKRKGRSRALEAVPAPPASGPRAPAK--ESPPKRVPdpsPVTKGTAAESGEEAARAIPRELPVKSS 473
Cdd:PHA03381 80 EDERPADPRPSRRPHAQPEASGPGPARGARGPAGSRGRGRraESPSPRDP---PNPKGASAPRGRKSACADSAALLDAPA 156
|
....
gi 2462606408 474 SLLP 477
Cdd:PHA03381 157 PAAP 160
|
|
| beta-trefoil_Ricin_EW29-like |
cd23449 |
ricin B-type lectin domain, beta-trefoil fold, found in Lumbricus terrestris 29-kDa ... |
1894-2008 |
5.02e-03 |
|
ricin B-type lectin domain, beta-trefoil fold, found in Lumbricus terrestris 29-kDa galactose-binding lectin (EW29) and similar proteins; EW29 is a galactose-binding lectin from the earthworm Lumbricus terrestris. It contains two ricin B-type lectin domains with a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. The second ricin B-type lectin domain may harbor two sugar-binding pockets in subdomains alpha and gamma. EW29 uses these two sugar-binding sites for its function as a single domain-type hemagglutinin.
Pssm-ID: 467327 [Multi-domain] Cd Length: 128 Bit Score: 39.20 E-value: 5.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 1894 YFRLRNKATGLFMS-TNGNLEDLKLLRIQVMEDVGADDQIWiYQ---EGCIKCRiAEDCCLTIVGS--LVTSgsklglAL 1967
Cdd:cd23449 2 YFYIKSKLNGKVLDvEGANAKPGAKVIMWEKKGGAEDNQLW-YEdevTGTIRSK-LNDFCLDASGDkgLILN------PY 73
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 2462606408 1968 DQNADSQFWsLKSDGRIYSKLKPNLVLDIKGGTQYDQNHII 2008
Cdd:cd23449 74 DPSNPKQQW-KISGNKIQNRSNPDNVLDIKGGSKDDGARLC 113
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
322-447 |
5.20e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 41.29 E-value: 5.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 322 QKSTDSPGADAELPEsAARDDAVFDDEVAPNAASDNASAEKKVKSPRAALDGGVASAASPESKPSPGTKGQLRGESDRSK 401
Cdd:NF040712 208 EPADARPEEVEPAPA-AEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGEPPAPGAA 286
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 2462606408 402 QPPPASSPTkrkgrsralEAVPAPPAsGPRAPAKESPPKRVPDPSP 447
Cdd:NF040712 287 ETPEAAEPP---------APAPAAPA-APAAPEAEEPARPEPPPAP 322
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
375-492 |
6.96e-03 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 41.58 E-value: 6.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 375 VASAASPESKPSPGtkGQLRGESDRSKQPPPASsPTKRkGRSRALEAVPAPPASGPRAPAKESPPKRVPDPSPVTKGTAA 454
Cdd:PHA03377 526 VTQPAKPHRKVQDG--FQRSGRRQKRATPPKVS-PSDR-GPPKASPPVMAPPSTGPRVMATPSTGPRDMAPPSTGPRQQA 601
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 2462606408 455 ESGEEAARAIPRELPVKSSS-----------LLPEIKPEHKRGPLPNHF 492
Cdd:PHA03377 602 KCKDGPPASGPHEKQPPSSAprdmapsvvrmFLRERLLEQSTGPKPKSF 650
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
82-246 |
7.31e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.40 E-value: 7.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 82 SPRENPREAEGELPESGGPAAPPDAELSPRWSSSAAAVAVQQCHENDSPQLEPLEAEGEPFPDATTTAKQLHSSPGN--- 158
Cdd:PRK12323 396 APAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVaaa 475
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 159 ----SSRQENAETPARS----------PGEDASPGAGHEQEAFLGVRGAPGSPTQERPAGGLGEAPNGAPS---VCAEEG 221
Cdd:PRK12323 476 aaaaPARAAPAAAPAPAdddpppweelPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAaapAPRAAA 555
|
170 180
....*....|....*....|....*
gi 2462606408 222 SLGPRNARSQPRKGASDLPGEPPAE 246
Cdd:PRK12323 556 ATEPVVAPRPPRASASGLPDMFDGD 580
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
329-439 |
8.77e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.12 E-value: 8.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 329 GADAELPESAARDDAVFDDEVAPNAASDNASAEKKVKSPRAALDGGVASAASPESKPSPGTKGQL---RGESDRSKQPPP 405
Cdd:PRK07764 389 GGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGApspPPAAAPSAQPAP 468
|
90 100 110
....*....|....*....|....*....|....*
gi 2462606408 406 ASSPTKRKGRSRALEAVPAPPASG-PRAPAKESPP 439
Cdd:PRK07764 469 APAAAPEPTAAPAPAPPAAPAPAAaPAAPAAPAAP 503
|
|
| PLN03237 |
PLN03237 |
DNA topoisomerase 2; Provisional |
327-476 |
9.54e-03 |
|
DNA topoisomerase 2; Provisional
Pssm-ID: 215641 [Multi-domain] Cd Length: 1465 Bit Score: 41.00 E-value: 9.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462606408 327 SPGADAELPEsaarDDAVFDDEVAPNAASDNASAEKKVKSPRAALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPA 406
Cdd:PLN03237 1250 APAAAKEKEE----EDEILDLKDRLAAYNLDSAPAQSAKMEETVKAVPARRAAARKKPLASVSVISDSDDDDDDFAVEVS 1325
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462606408 407 SSP-TKRKGRSRALEAVPaPPASGPRAPAKESPPKRVPDPSPVTK--------GTAAESGEEAARAIPreLPVKSSSLL 476
Cdd:PLN03237 1326 LAErLKKKGGRKPAAANK-KAAKPPAAAKKRGPATVQSGQKLLTEmlkpaeaiGISPEKKVRKMRASP--FNKKSGSVL 1401
|
|
| |
