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Conserved domains on  [gi|2462608419|ref|XP_054211381|]
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protein THEMIS isoform X6 [Homo sapiens]

Protein Classification

CABIT domain-containing protein( domain architecture ID 12119421)

CABIT domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CABIT pfam12736
Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- ...
17-274 4.89e-60

Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- in Themis') is found in a newly identified gene family that has three mammalian homologs (Themis, Icb1 and 9130404H23Rik) that encode proteins with two CABIT domains and a highly conserved proline-rich region. In contrast, Fam59A, Fam59B and related proteins from mammals to cnidarians, including the insect Serrano proteins, have a single copy of the CABIT domain, a proline-rich region and often a C-terminal SAM (sterile-motif) domain. Multiple-sequence alignment has predicted that the CABIT domain adopts an all-strand structure with at least 12 strands, ie a dyad of six-stranded beta-barrel units. The CABIT domain contains a nearly absolutely conserved cysteine residue which is likely to be central to its function. CABIT domain proteins function downstream of tyrosine kinase signalling and interact with GRB2.


:

Pssm-ID: 463686  Cd Length: 261  Bit Score: 201.91  E-value: 4.89e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462608419  17 LPRVLEIQAGIYLEGSIYemfgnecCFSTGEVIKITGLK-VKKIIAEICEQiEGCESLQPFELPMNFPGtfvkrskecLF 95
Cdd:pfam12736   1 LPQVVKVTSGIYGEGSVY-------CLSKGDVLLIHGLKqAKKVVAQEVEE-GRGVVGPKLLIPLSYPG---------LF 63
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462608419  96 KIVADKTPYLTMEEITRTIHI-------GPSRLGHPCFYHQKDIKLENLIIKQGEQIMLNSVEEIDGE----------IM 158
Cdd:pfam12736  64 KLLADEGPFESVEELARSFPIrvlakeeGPDSVGVPMFRSSDDMSLANFTLQAGEELTLLGVEESSGGkeelasvtvgDY 143
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462608419 159 VSCAVarNHQTHSFNLPLSQEGEFYE-CEDERIYTLKEIVE-WKIPKNRTRTVNLTDFSNKwdstnpfpKDFYGTLILKP 236
Cdd:pfam12736 144 LICLV--NQTGESVLLPLSCRGRFSEeCEDEGEYTLREIVEkFKLPLNVKVVVGDPPRGDL--------DAFTGELRLEP 213
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 2462608419 237 VYEIQGVMK--------FRKDIIRILPSLDVEVKDIT--DSYDANWFL 274
Cdd:pfam12736 214 VYEEQAVVAspllipvpFRKLEVPIPSDLDVEVAEVTsaDNKDYEEFL 261
CABIT pfam12736
Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- ...
290-538 6.57e-40

Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- in Themis') is found in a newly identified gene family that has three mammalian homologs (Themis, Icb1 and 9130404H23Rik) that encode proteins with two CABIT domains and a highly conserved proline-rich region. In contrast, Fam59A, Fam59B and related proteins from mammals to cnidarians, including the insect Serrano proteins, have a single copy of the CABIT domain, a proline-rich region and often a C-terminal SAM (sterile-motif) domain. Multiple-sequence alignment has predicted that the CABIT domain adopts an all-strand structure with at least 12 strands, ie a dyad of six-stranded beta-barrel units. The CABIT domain contains a nearly absolutely conserved cysteine residue which is likely to be central to its function. CABIT domain proteins function downstream of tyrosine kinase signalling and interact with GRB2.


:

Pssm-ID: 463686  Cd Length: 261  Bit Score: 147.21  E-value: 6.57e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462608419 290 FPIVTEVIEAPEGnHLPQSILQPGKTIVIHKKYQASRILASEIRSNF--PKRHFLIPTSYKGKFKRRPRE--FPTAYDL- 364
Cdd:pfam12736   1 LPQVVKVTSGIYG-EGSVYCLSKGDVLLIHGLKQAKKVVAQEVEEGRgvVGPKLLIPLSYPGLFKLLADEgpFESVEELa 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462608419 365 ------EIAKSE-------------------------KEPLHVVATKAFHSPHDKLSSVSVGDqflvhqsettevlcegi 413
Cdd:pfam12736  80 rsfpirVLAKEEgpdsvgvpmfrssddmslanftlqaGEELTLLGVEESSGGKEELASVTVGD----------------- 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462608419 414 kkvvnVLACEKilKKSYEAALLPLYMEGGFVEVIHDKKQYPISELCKQFRLPFNVKVSVRDLSIEEDVlAATPGLQLEED 493
Cdd:pfam12736 143 -----YLICLV--NQTGESVLLPLSCRGRFSEECEDEGEYTLREIVEKFKLPLNVKVVVGDPPRGDLD-AFTGELRLEPV 214
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 2462608419 494 ITDSYLLISDFANPTECWEIPVG-RLNMTVQLVSNFSRDAEPFLVR 538
Cdd:pfam12736 215 YEEQAVVASPLLIPVPFRKLEVPiPSDLDVEVAEVTSADNKDYEEF 260
 
Name Accession Description Interval E-value
CABIT pfam12736
Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- ...
17-274 4.89e-60

Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- in Themis') is found in a newly identified gene family that has three mammalian homologs (Themis, Icb1 and 9130404H23Rik) that encode proteins with two CABIT domains and a highly conserved proline-rich region. In contrast, Fam59A, Fam59B and related proteins from mammals to cnidarians, including the insect Serrano proteins, have a single copy of the CABIT domain, a proline-rich region and often a C-terminal SAM (sterile-motif) domain. Multiple-sequence alignment has predicted that the CABIT domain adopts an all-strand structure with at least 12 strands, ie a dyad of six-stranded beta-barrel units. The CABIT domain contains a nearly absolutely conserved cysteine residue which is likely to be central to its function. CABIT domain proteins function downstream of tyrosine kinase signalling and interact with GRB2.


Pssm-ID: 463686  Cd Length: 261  Bit Score: 201.91  E-value: 4.89e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462608419  17 LPRVLEIQAGIYLEGSIYemfgnecCFSTGEVIKITGLK-VKKIIAEICEQiEGCESLQPFELPMNFPGtfvkrskecLF 95
Cdd:pfam12736   1 LPQVVKVTSGIYGEGSVY-------CLSKGDVLLIHGLKqAKKVVAQEVEE-GRGVVGPKLLIPLSYPG---------LF 63
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462608419  96 KIVADKTPYLTMEEITRTIHI-------GPSRLGHPCFYHQKDIKLENLIIKQGEQIMLNSVEEIDGE----------IM 158
Cdd:pfam12736  64 KLLADEGPFESVEELARSFPIrvlakeeGPDSVGVPMFRSSDDMSLANFTLQAGEELTLLGVEESSGGkeelasvtvgDY 143
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462608419 159 VSCAVarNHQTHSFNLPLSQEGEFYE-CEDERIYTLKEIVE-WKIPKNRTRTVNLTDFSNKwdstnpfpKDFYGTLILKP 236
Cdd:pfam12736 144 LICLV--NQTGESVLLPLSCRGRFSEeCEDEGEYTLREIVEkFKLPLNVKVVVGDPPRGDL--------DAFTGELRLEP 213
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 2462608419 237 VYEIQGVMK--------FRKDIIRILPSLDVEVKDIT--DSYDANWFL 274
Cdd:pfam12736 214 VYEEQAVVAspllipvpFRKLEVPIPSDLDVEVAEVTsaDNKDYEEFL 261
CABIT pfam12736
Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- ...
290-538 6.57e-40

Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- in Themis') is found in a newly identified gene family that has three mammalian homologs (Themis, Icb1 and 9130404H23Rik) that encode proteins with two CABIT domains and a highly conserved proline-rich region. In contrast, Fam59A, Fam59B and related proteins from mammals to cnidarians, including the insect Serrano proteins, have a single copy of the CABIT domain, a proline-rich region and often a C-terminal SAM (sterile-motif) domain. Multiple-sequence alignment has predicted that the CABIT domain adopts an all-strand structure with at least 12 strands, ie a dyad of six-stranded beta-barrel units. The CABIT domain contains a nearly absolutely conserved cysteine residue which is likely to be central to its function. CABIT domain proteins function downstream of tyrosine kinase signalling and interact with GRB2.


Pssm-ID: 463686  Cd Length: 261  Bit Score: 147.21  E-value: 6.57e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462608419 290 FPIVTEVIEAPEGnHLPQSILQPGKTIVIHKKYQASRILASEIRSNF--PKRHFLIPTSYKGKFKRRPRE--FPTAYDL- 364
Cdd:pfam12736   1 LPQVVKVTSGIYG-EGSVYCLSKGDVLLIHGLKQAKKVVAQEVEEGRgvVGPKLLIPLSYPGLFKLLADEgpFESVEELa 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462608419 365 ------EIAKSE-------------------------KEPLHVVATKAFHSPHDKLSSVSVGDqflvhqsettevlcegi 413
Cdd:pfam12736  80 rsfpirVLAKEEgpdsvgvpmfrssddmslanftlqaGEELTLLGVEESSGGKEELASVTVGD----------------- 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462608419 414 kkvvnVLACEKilKKSYEAALLPLYMEGGFVEVIHDKKQYPISELCKQFRLPFNVKVSVRDLSIEEDVlAATPGLQLEED 493
Cdd:pfam12736 143 -----YLICLV--NQTGESVLLPLSCRGRFSEECEDEGEYTLREIVEKFKLPLNVKVVVGDPPRGDLD-AFTGELRLEPV 214
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 2462608419 494 ITDSYLLISDFANPTECWEIPVG-RLNMTVQLVSNFSRDAEPFLVR 538
Cdd:pfam12736 215 YEEQAVVASPLLIPVPFRKLEVPiPSDLDVEVAEVTSADNKDYEEF 260
 
Name Accession Description Interval E-value
CABIT pfam12736
Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- ...
17-274 4.89e-60

Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- in Themis') is found in a newly identified gene family that has three mammalian homologs (Themis, Icb1 and 9130404H23Rik) that encode proteins with two CABIT domains and a highly conserved proline-rich region. In contrast, Fam59A, Fam59B and related proteins from mammals to cnidarians, including the insect Serrano proteins, have a single copy of the CABIT domain, a proline-rich region and often a C-terminal SAM (sterile-motif) domain. Multiple-sequence alignment has predicted that the CABIT domain adopts an all-strand structure with at least 12 strands, ie a dyad of six-stranded beta-barrel units. The CABIT domain contains a nearly absolutely conserved cysteine residue which is likely to be central to its function. CABIT domain proteins function downstream of tyrosine kinase signalling and interact with GRB2.


Pssm-ID: 463686  Cd Length: 261  Bit Score: 201.91  E-value: 4.89e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462608419  17 LPRVLEIQAGIYLEGSIYemfgnecCFSTGEVIKITGLK-VKKIIAEICEQiEGCESLQPFELPMNFPGtfvkrskecLF 95
Cdd:pfam12736   1 LPQVVKVTSGIYGEGSVY-------CLSKGDVLLIHGLKqAKKVVAQEVEE-GRGVVGPKLLIPLSYPG---------LF 63
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462608419  96 KIVADKTPYLTMEEITRTIHI-------GPSRLGHPCFYHQKDIKLENLIIKQGEQIMLNSVEEIDGE----------IM 158
Cdd:pfam12736  64 KLLADEGPFESVEELARSFPIrvlakeeGPDSVGVPMFRSSDDMSLANFTLQAGEELTLLGVEESSGGkeelasvtvgDY 143
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462608419 159 VSCAVarNHQTHSFNLPLSQEGEFYE-CEDERIYTLKEIVE-WKIPKNRTRTVNLTDFSNKwdstnpfpKDFYGTLILKP 236
Cdd:pfam12736 144 LICLV--NQTGESVLLPLSCRGRFSEeCEDEGEYTLREIVEkFKLPLNVKVVVGDPPRGDL--------DAFTGELRLEP 213
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 2462608419 237 VYEIQGVMK--------FRKDIIRILPSLDVEVKDIT--DSYDANWFL 274
Cdd:pfam12736 214 VYEEQAVVAspllipvpFRKLEVPIPSDLDVEVAEVTsaDNKDYEEFL 261
CABIT pfam12736
Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- ...
290-538 6.57e-40

Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- in Themis') is found in a newly identified gene family that has three mammalian homologs (Themis, Icb1 and 9130404H23Rik) that encode proteins with two CABIT domains and a highly conserved proline-rich region. In contrast, Fam59A, Fam59B and related proteins from mammals to cnidarians, including the insect Serrano proteins, have a single copy of the CABIT domain, a proline-rich region and often a C-terminal SAM (sterile-motif) domain. Multiple-sequence alignment has predicted that the CABIT domain adopts an all-strand structure with at least 12 strands, ie a dyad of six-stranded beta-barrel units. The CABIT domain contains a nearly absolutely conserved cysteine residue which is likely to be central to its function. CABIT domain proteins function downstream of tyrosine kinase signalling and interact with GRB2.


Pssm-ID: 463686  Cd Length: 261  Bit Score: 147.21  E-value: 6.57e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462608419 290 FPIVTEVIEAPEGnHLPQSILQPGKTIVIHKKYQASRILASEIRSNF--PKRHFLIPTSYKGKFKRRPRE--FPTAYDL- 364
Cdd:pfam12736   1 LPQVVKVTSGIYG-EGSVYCLSKGDVLLIHGLKQAKKVVAQEVEEGRgvVGPKLLIPLSYPGLFKLLADEgpFESVEELa 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462608419 365 ------EIAKSE-------------------------KEPLHVVATKAFHSPHDKLSSVSVGDqflvhqsettevlcegi 413
Cdd:pfam12736  80 rsfpirVLAKEEgpdsvgvpmfrssddmslanftlqaGEELTLLGVEESSGGKEELASVTVGD----------------- 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462608419 414 kkvvnVLACEKilKKSYEAALLPLYMEGGFVEVIHDKKQYPISELCKQFRLPFNVKVSVRDLSIEEDVlAATPGLQLEED 493
Cdd:pfam12736 143 -----YLICLV--NQTGESVLLPLSCRGRFSEECEDEGEYTLREIVEKFKLPLNVKVVVGDPPRGDLD-AFTGELRLEPV 214
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 2462608419 494 ITDSYLLISDFANPTECWEIPVG-RLNMTVQLVSNFSRDAEPFLVR 538
Cdd:pfam12736 215 YEEQAVVASPLLIPVPFRKLEVPiPSDLDVEVAEVTSADNKDYEEF 260
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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