tenascin isoform X23 [Homo sapiens]
List of domain hits
Name | Accession | Description | Interval | E-value | |||||||
FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
847-1241 | 5.12e-24 | |||||||
Fibronectin type 3 domain [General function prediction only]; : Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 108.94 E-value: 5.12e-24
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fn3 | pfam00041 | Fibronectin type III domain; |
1260-1327 | 9.13e-15 | |||||||
Fibronectin type III domain; : Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 70.91 E-value: 9.13e-15
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fn3 | pfam00041 | Fibronectin type III domain; |
804-884 | 1.12e-12 | |||||||
Fibronectin type III domain; : Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 65.13 E-value: 1.12e-12
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fn3 | pfam00041 | Fibronectin type III domain; |
713-793 | 6.03e-12 | |||||||
Fibronectin type III domain; : Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 62.82 E-value: 6.03e-12
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fn3 | pfam00041 | Fibronectin type III domain; |
1348-1427 | 1.62e-11 | |||||||
Fibronectin type III domain; : Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 61.66 E-value: 1.62e-11
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FN3 super family | cl27307 | Fibronectin type 3 domain [General function prediction only]; |
624-779 | 5.59e-10 | |||||||
Fibronectin type 3 domain [General function prediction only]; The actual alignment was detected with superfamily member COG3401: Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 64.25 E-value: 5.59e-10
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fn3 | pfam00041 | Fibronectin type III domain; |
1439-1508 | 2.30e-09 | |||||||
Fibronectin type III domain; : Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 55.50 E-value: 2.30e-09
|
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fn3 | pfam00041 | Fibronectin type III domain; |
1533-1596 | 6.61e-08 | |||||||
Fibronectin type III domain; : Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 51.65 E-value: 6.61e-08
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EGF_Tenascin super family | cl46594 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
408-435 | 5.96e-06 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. The actual alignment was detected with superfamily member pfam18720: Pssm-ID: 480934 Cd Length: 29 Bit Score: 44.21 E-value: 5.96e-06
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EGF_Tenascin super family | cl46594 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
501-528 | 2.52e-05 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. The actual alignment was detected with superfamily member pfam18720: Pssm-ID: 480934 Cd Length: 29 Bit Score: 42.67 E-value: 2.52e-05
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EGF_Tenascin super family | cl46594 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
190-217 | 3.80e-05 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. The actual alignment was detected with superfamily member pfam18720: Pssm-ID: 480934 Cd Length: 29 Bit Score: 41.90 E-value: 3.80e-05
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EGF_Tenascin super family | cl46594 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
594-621 | 6.24e-04 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. The actual alignment was detected with superfamily member pfam18720: Pssm-ID: 480934 Cd Length: 29 Bit Score: 38.43 E-value: 6.24e-04
|
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EGF_Tenascin super family | cl46594 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
377-403 | 1.62e-03 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. The actual alignment was detected with superfamily member pfam18720: Pssm-ID: 480934 Cd Length: 29 Bit Score: 37.28 E-value: 1.62e-03
|
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EGF_Tenascin super family | cl46594 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
439-466 | 1.63e-03 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. The actual alignment was detected with superfamily member pfam18720: Pssm-ID: 480934 Cd Length: 29 Bit Score: 37.28 E-value: 1.63e-03
|
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EGF_Tenascin super family | cl46594 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
346-373 | 2.59e-03 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. The actual alignment was detected with superfamily member pfam18720: Pssm-ID: 480934 Cd Length: 29 Bit Score: 36.89 E-value: 2.59e-03
|
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EGF_Tenascin super family | cl46594 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
470-496 | 2.59e-03 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. The actual alignment was detected with superfamily member pfam18720: Pssm-ID: 480934 Cd Length: 29 Bit Score: 36.89 E-value: 2.59e-03
|
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EGF_Tenascin super family | cl46594 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
563-589 | 4.46e-03 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. The actual alignment was detected with superfamily member pfam18720: Pssm-ID: 480934 Cd Length: 29 Bit Score: 36.12 E-value: 4.46e-03
|
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EGF_2 | pfam07974 | EGF-like domain; This family contains EGF domains found in a variety of extracellular proteins. |
535-558 | 9.03e-03 | |||||||
EGF-like domain; This family contains EGF domains found in a variety of extracellular proteins. : Pssm-ID: 400365 Cd Length: 26 Bit Score: 35.40 E-value: 9.03e-03
|
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Name | Accession | Description | Interval | E-value | |||||||
FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
847-1241 | 5.12e-24 | |||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 108.94 E-value: 5.12e-24
|
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fn3 | pfam00041 | Fibronectin type III domain; |
1260-1327 | 9.13e-15 | |||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 70.91 E-value: 9.13e-15
|
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fn3 | pfam00041 | Fibronectin type III domain; |
894-976 | 2.13e-14 | |||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 70.14 E-value: 2.13e-14
|
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
894-978 | 3.50e-13 | |||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 66.75 E-value: 3.50e-13
|
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fn3 | pfam00041 | Fibronectin type III domain; |
804-884 | 1.12e-12 | |||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 65.13 E-value: 1.12e-12
|
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fn3 | pfam00041 | Fibronectin type III domain; |
713-793 | 6.03e-12 | |||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 62.82 E-value: 6.03e-12
|
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
986-1062 | 1.54e-11 | |||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 61.86 E-value: 1.54e-11
|
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fn3 | pfam00041 | Fibronectin type III domain; |
1348-1427 | 1.62e-11 | |||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 61.66 E-value: 1.62e-11
|
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FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
624-779 | 5.59e-10 | |||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 64.25 E-value: 5.59e-10
|
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
804-882 | 1.81e-09 | |||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 56.08 E-value: 1.81e-09
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fn3 | pfam00041 | Fibronectin type III domain; |
1439-1508 | 2.30e-09 | |||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 55.50 E-value: 2.30e-09
|
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fn3 | pfam00041 | Fibronectin type III domain; |
624-695 | 1.88e-08 | |||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 53.19 E-value: 1.88e-08
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
624-710 | 1.97e-08 | |||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 53.27 E-value: 1.97e-08
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fn3 | pfam00041 | Fibronectin type III domain; |
1533-1596 | 6.61e-08 | |||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 51.65 E-value: 6.61e-08
|
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1260-1344 | 6.80e-08 | |||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 51.73 E-value: 6.80e-08
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
713-801 | 1.29e-07 | |||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 50.96 E-value: 1.29e-07
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
713-794 | 2.19e-07 | |||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 49.92 E-value: 2.19e-07
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1261-1326 | 5.73e-06 | |||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 46.07 E-value: 5.73e-06
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EGF_Tenascin | pfam18720 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
408-435 | 5.96e-06 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. Pssm-ID: 376143 Cd Length: 29 Bit Score: 44.21 E-value: 5.96e-06
|
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EGF_Tenascin | pfam18720 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
501-528 | 2.52e-05 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. Pssm-ID: 376143 Cd Length: 29 Bit Score: 42.67 E-value: 2.52e-05
|
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EGF_Tenascin | pfam18720 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
190-217 | 3.80e-05 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. Pssm-ID: 376143 Cd Length: 29 Bit Score: 41.90 E-value: 3.80e-05
|
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1533-1596 | 4.84e-05 | |||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 43.64 E-value: 4.84e-05
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
624-695 | 7.02e-05 | |||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 42.99 E-value: 7.02e-05
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1351-1435 | 1.83e-04 | |||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 42.10 E-value: 1.83e-04
|
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1533-1596 | 5.82e-04 | |||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 40.29 E-value: 5.82e-04
|
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EGF_Tenascin | pfam18720 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
594-621 | 6.24e-04 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. Pssm-ID: 376143 Cd Length: 29 Bit Score: 38.43 E-value: 6.24e-04
|
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EGF_Tenascin | pfam18720 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
377-403 | 1.62e-03 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. Pssm-ID: 376143 Cd Length: 29 Bit Score: 37.28 E-value: 1.62e-03
|
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EGF_Tenascin | pfam18720 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
439-466 | 1.63e-03 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. Pssm-ID: 376143 Cd Length: 29 Bit Score: 37.28 E-value: 1.63e-03
|
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EGF_Tenascin | pfam18720 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
346-373 | 2.59e-03 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. Pssm-ID: 376143 Cd Length: 29 Bit Score: 36.89 E-value: 2.59e-03
|
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EGF_Tenascin | pfam18720 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
470-496 | 2.59e-03 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. Pssm-ID: 376143 Cd Length: 29 Bit Score: 36.89 E-value: 2.59e-03
|
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1352-1420 | 2.66e-03 | |||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 38.36 E-value: 2.66e-03
|
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EGF_Tenascin | pfam18720 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
563-589 | 4.46e-03 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. Pssm-ID: 376143 Cd Length: 29 Bit Score: 36.12 E-value: 4.46e-03
|
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EGF_2 | pfam07974 | EGF-like domain; This family contains EGF domains found in a variety of extracellular proteins. |
535-558 | 9.03e-03 | |||||||
EGF-like domain; This family contains EGF domains found in a variety of extracellular proteins. Pssm-ID: 400365 Cd Length: 26 Bit Score: 35.40 E-value: 9.03e-03
|
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Name | Accession | Description | Interval | E-value | |||||||
FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
847-1241 | 5.12e-24 | |||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 108.94 E-value: 5.12e-24
|
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fn3 | pfam00041 | Fibronectin type III domain; |
1260-1327 | 9.13e-15 | |||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 70.91 E-value: 9.13e-15
|
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fn3 | pfam00041 | Fibronectin type III domain; |
894-976 | 2.13e-14 | |||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 70.14 E-value: 2.13e-14
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fn3 | pfam00041 | Fibronectin type III domain; |
1075-1154 | 1.93e-13 | |||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 67.05 E-value: 1.93e-13
|
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fn3 | pfam00041 | Fibronectin type III domain; |
986-1064 | 2.26e-13 | |||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 67.05 E-value: 2.26e-13
|
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
894-978 | 3.50e-13 | |||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 66.75 E-value: 3.50e-13
|
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fn3 | pfam00041 | Fibronectin type III domain; |
804-884 | 1.12e-12 | |||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 65.13 E-value: 1.12e-12
|
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
986-1065 | 2.17e-12 | |||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 64.44 E-value: 2.17e-12
|
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fn3 | pfam00041 | Fibronectin type III domain; |
713-793 | 6.03e-12 | |||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 62.82 E-value: 6.03e-12
|
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FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
667-988 | 9.65e-12 | |||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 69.65 E-value: 9.65e-12
|
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fn3 | pfam00041 | Fibronectin type III domain; |
1169-1241 | 1.12e-11 | |||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 62.05 E-value: 1.12e-11
|
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
986-1062 | 1.54e-11 | |||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 61.86 E-value: 1.54e-11
|
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
804-891 | 1.60e-11 | |||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 62.13 E-value: 1.60e-11
|
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fn3 | pfam00041 | Fibronectin type III domain; |
1348-1427 | 1.62e-11 | |||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 61.66 E-value: 1.62e-11
|
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
894-974 | 5.43e-10 | |||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 57.24 E-value: 5.43e-10
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FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
624-779 | 5.59e-10 | |||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 64.25 E-value: 5.59e-10
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
804-882 | 1.81e-09 | |||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 56.08 E-value: 1.81e-09
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fn3 | pfam00041 | Fibronectin type III domain; |
1439-1508 | 2.30e-09 | |||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 55.50 E-value: 2.30e-09
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fn3 | pfam00041 | Fibronectin type III domain; |
624-695 | 1.88e-08 | |||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 53.19 E-value: 1.88e-08
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
624-710 | 1.97e-08 | |||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 53.27 E-value: 1.97e-08
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fn3 | pfam00041 | Fibronectin type III domain; |
1533-1596 | 6.61e-08 | |||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 51.65 E-value: 6.61e-08
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1260-1344 | 6.80e-08 | |||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 51.73 E-value: 6.80e-08
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
713-801 | 1.29e-07 | |||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 50.96 E-value: 1.29e-07
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
713-794 | 2.19e-07 | |||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 49.92 E-value: 2.19e-07
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1078-1162 | 4.02e-06 | |||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 46.72 E-value: 4.02e-06
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1261-1326 | 5.73e-06 | |||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 46.07 E-value: 5.73e-06
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EGF_Tenascin | pfam18720 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
408-435 | 5.96e-06 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. Pssm-ID: 376143 Cd Length: 29 Bit Score: 44.21 E-value: 5.96e-06
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1171-1253 | 2.07e-05 | |||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 44.79 E-value: 2.07e-05
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EGF_Tenascin | pfam18720 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
501-528 | 2.52e-05 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. Pssm-ID: 376143 Cd Length: 29 Bit Score: 42.67 E-value: 2.52e-05
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EGF_Tenascin | pfam18720 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
190-217 | 3.80e-05 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. Pssm-ID: 376143 Cd Length: 29 Bit Score: 41.90 E-value: 3.80e-05
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1171-1240 | 4.14e-05 | |||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 43.37 E-value: 4.14e-05
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1078-1147 | 4.22e-05 | |||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 43.37 E-value: 4.22e-05
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1533-1596 | 4.84e-05 | |||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 43.64 E-value: 4.84e-05
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
624-695 | 7.02e-05 | |||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 42.99 E-value: 7.02e-05
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1351-1435 | 1.83e-04 | |||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 42.10 E-value: 1.83e-04
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COG4733 | COG4733 | Phage-related protein, tail protein J [Mobilome: prophages, transposons]; |
868-1239 | 2.33e-04 | |||||||
Phage-related protein, tail protein J [Mobilome: prophages, transposons]; Pssm-ID: 443767 [Multi-domain] Cd Length: 978 Bit Score: 46.09 E-value: 2.33e-04
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fn3_2 | pfam16893 | Fibronectin type III domain; This fibronectin type III domain is found in fungal chitin ... |
713-783 | 3.59e-04 | |||||||
Fibronectin type III domain; This fibronectin type III domain is found in fungal chitin biosynthesis protein CHS5 where, together with the neighbouring BRCT domain (pfam00533), it binds to the Arf1 GTPase. Pssm-ID: 435634 Cd Length: 89 Bit Score: 41.03 E-value: 3.59e-04
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COG3979 | COG3979 | Chitodextrinase [Carbohydrate transport and metabolism]; |
895-1242 | 4.02e-04 | |||||||
Chitodextrinase [Carbohydrate transport and metabolism]; Pssm-ID: 443178 [Multi-domain] Cd Length: 369 Bit Score: 44.76 E-value: 4.02e-04
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1533-1596 | 5.82e-04 | |||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 40.29 E-value: 5.82e-04
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EGF_Tenascin | pfam18720 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
594-621 | 6.24e-04 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. Pssm-ID: 376143 Cd Length: 29 Bit Score: 38.43 E-value: 6.24e-04
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EGF_Tenascin | pfam18720 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
377-403 | 1.62e-03 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. Pssm-ID: 376143 Cd Length: 29 Bit Score: 37.28 E-value: 1.62e-03
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EGF_Tenascin | pfam18720 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
439-466 | 1.63e-03 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. Pssm-ID: 376143 Cd Length: 29 Bit Score: 37.28 E-value: 1.63e-03
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EGF_2 | pfam07974 | EGF-like domain; This family contains EGF domains found in a variety of extracellular proteins. |
380-403 | 1.73e-03 | |||||||
EGF-like domain; This family contains EGF domains found in a variety of extracellular proteins. Pssm-ID: 400365 Cd Length: 26 Bit Score: 37.33 E-value: 1.73e-03
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EGF_2 | pfam07974 | EGF-like domain; This family contains EGF domains found in a variety of extracellular proteins. |
412-434 | 2.24e-03 | |||||||
EGF-like domain; This family contains EGF domains found in a variety of extracellular proteins. Pssm-ID: 400365 Cd Length: 26 Bit Score: 36.94 E-value: 2.24e-03
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EGF_Tenascin | pfam18720 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
346-373 | 2.59e-03 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. Pssm-ID: 376143 Cd Length: 29 Bit Score: 36.89 E-value: 2.59e-03
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EGF_Tenascin | pfam18720 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
470-496 | 2.59e-03 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. Pssm-ID: 376143 Cd Length: 29 Bit Score: 36.89 E-value: 2.59e-03
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1352-1420 | 2.66e-03 | |||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 38.36 E-value: 2.66e-03
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EGF_2 | pfam07974 | EGF-like domain; This family contains EGF domains found in a variety of extracellular proteins. |
473-496 | 3.28e-03 | |||||||
EGF-like domain; This family contains EGF domains found in a variety of extracellular proteins. Pssm-ID: 400365 Cd Length: 26 Bit Score: 36.56 E-value: 3.28e-03
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EGF_Tenascin | pfam18720 | Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. |
563-589 | 4.46e-03 | |||||||
Tenascin EGF domain; This entry represents the EGF-like domains found in tenascin proteins. Pssm-ID: 376143 Cd Length: 29 Bit Score: 36.12 E-value: 4.46e-03
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EGF_2 | pfam07974 | EGF-like domain; This family contains EGF domains found in a variety of extracellular proteins. |
504-527 | 8.77e-03 | |||||||
EGF-like domain; This family contains EGF domains found in a variety of extracellular proteins. Pssm-ID: 400365 Cd Length: 26 Bit Score: 35.40 E-value: 8.77e-03
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EGF_2 | pfam07974 | EGF-like domain; This family contains EGF domains found in a variety of extracellular proteins. |
535-558 | 9.03e-03 | |||||||
EGF-like domain; This family contains EGF domains found in a variety of extracellular proteins. Pssm-ID: 400365 Cd Length: 26 Bit Score: 35.40 E-value: 9.03e-03
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Blast search parameters | ||||
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