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Conserved domains on  [gi|2462529985|ref|XP_054227073|]
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zinc finger protein AEBP2 isoform X2 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG5048 super family cl34881
FOG: Zn-finger [General function prediction only];
18-110 1.00e-03

FOG: Zn-finger [General function prediction only];


The actual alignment was detected with superfamily member COG5048:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 40.45  E-value: 1.00e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462529985  18 NGQGSTTSSSKNIAYNCCWDQCQACFNSSPDLADHIRSIHVDGQRGGVFVCLWKGCkvyNTPSTSQSWLQRHMLTHSGDK 97
Cdd:COG5048   274 SPNESDSSSEKGFSLPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLC---GKLFSRNDALKRHILLHTSIS 350

                          90
                  ....*....|...
gi 2462529985  98 PFKCVVGGCNASF 110
Cdd:COG5048   351 PAKEKLLNSSSKF 363
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
18-110 1.00e-03

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 40.45  E-value: 1.00e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462529985  18 NGQGSTTSSSKNIAYNCCWDQCQACFNSSPDLADHIRSIHVDGQRGGVFVCLWKGCkvyNTPSTSQSWLQRHMLTHSGDK 97
Cdd:COG5048   274 SPNESDSSSEKGFSLPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLC---GKLFSRNDALKRHILLHTSIS 350

                          90
                  ....*....|...
gi 2462529985  98 PFKCVVGGCNASF 110
Cdd:COG5048   351 PAKEKLLNSSSKF 363
zf-H2C2_2 pfam13465
Zinc-finger double domain;
86-112 9.49e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 33.11  E-value: 9.49e-03
                          10        20
                  ....*....|....*....|....*..
gi 2462529985  86 LQRHMLTHSGDKPFKCvvGGCNASFAS 112
Cdd:pfam13465   2 LKRHMRTHTGEKPYKC--PECGKSFKS 26
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
18-110 1.00e-03

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 40.45  E-value: 1.00e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462529985  18 NGQGSTTSSSKNIAYNCCWDQCQACFNSSPDLADHIRSIHVDGQRGGVFVCLWKGCkvyNTPSTSQSWLQRHMLTHSGDK 97
Cdd:COG5048   274 SPNESDSSSEKGFSLPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLC---GKLFSRNDALKRHILLHTSIS 350

                          90
                  ....*....|...
gi 2462529985  98 PFKCVVGGCNASF 110
Cdd:COG5048   351 PAKEKLLNSSSKF 363
zf-H2C2_2 pfam13465
Zinc-finger double domain;
86-112 9.49e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 33.11  E-value: 9.49e-03
                          10        20
                  ....*....|....*....|....*..
gi 2462529985  86 LQRHMLTHSGDKPFKCvvGGCNASFAS 112
Cdd:pfam13465   2 LKRHMRTHTGEKPYKC--PECGKSFKS 26
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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