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Conserved domains on  [gi|2462531743|ref|XP_054227929|]
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insulin-like growth factor-binding protein 6 isoform X1 [Homo sapiens]

Protein Classification

IB domain-containing protein( domain architecture ID 10638927)

IB domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
IB smart00121
Insulin growth factor-binding protein homologues; High affinity binding partners of ...
 27-105 9.52e-16

Insulin growth factor-binding protein homologues; High affinity binding partners of insulin-like growth factors.


:

Pssm-ID: 197525  Cd Length: 75  Bit Score: 67.11  E-value: 9.52e-16
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462531743   27 ARCPGCGQGVQAGCPGGCVEeedgGSPAEGCAEAEGCLRREGQECGVYTPNCAPGLQCHPPKDDEAPLRALLLGRGRCL 105
Cdd:smart00121   1 ARCPPCDPARCPPCPPGCAE----LVRLDGCGCCPVCARQEGEPCGVYTPRCAPGLRCQPPPGEERPLRALLHGQGVCM 75
 
Name Accession Description Interval E-value
IB smart00121
Insulin growth factor-binding protein homologues; High affinity binding partners of ...
 27-105 9.52e-16

Insulin growth factor-binding protein homologues; High affinity binding partners of insulin-like growth factors.


Pssm-ID: 197525  Cd Length: 75  Bit Score: 67.11  E-value: 9.52e-16
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462531743   27 ARCPGCGQGVQAGCPGGCVEeedgGSPAEGCAEAEGCLRREGQECGVYTPNCAPGLQCHPPKDDEAPLRALLLGRGRCL 105
Cdd:smart00121   1 ARCPPCDPARCPPCPPGCAE----LVRLDGCGCCPVCARQEGEPCGVYTPRCAPGLRCQPPPGEERPLRALLHGQGVCM 75
IGFBP pfam00219
Insulin-like growth factor binding protein;
50-84 3.57e-03

Insulin-like growth factor binding protein;


Pssm-ID: 459717  Cd Length: 53  Bit Score: 33.84  E-value: 3.57e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 2462531743  50 GGSPAEGCAEAEGCLRREGQECGVYTPNCAPGLQC 84
Cdd:pfam00219  19 AGVVLDGCGCCKVCARQEGEPCGVYTPPCGKGLRC 53
 
Name Accession Description Interval E-value
IB smart00121
Insulin growth factor-binding protein homologues; High affinity binding partners of ...
 27-105 9.52e-16

Insulin growth factor-binding protein homologues; High affinity binding partners of insulin-like growth factors.


Pssm-ID: 197525  Cd Length: 75  Bit Score: 67.11  E-value: 9.52e-16
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462531743   27 ARCPGCGQGVQAGCPGGCVEeedgGSPAEGCAEAEGCLRREGQECGVYTPNCAPGLQCHPPKDDEAPLRALLLGRGRCL 105
Cdd:smart00121   1 ARCPPCDPARCPPCPPGCAE----LVRLDGCGCCPVCARQEGEPCGVYTPRCAPGLRCQPPPGEERPLRALLHGQGVCM 75
IGFBP pfam00219
Insulin-like growth factor binding protein;
50-84 3.57e-03

Insulin-like growth factor binding protein;


Pssm-ID: 459717  Cd Length: 53  Bit Score: 33.84  E-value: 3.57e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 2462531743  50 GGSPAEGCAEAEGCLRREGQECGVYTPNCAPGLQC 84
Cdd:pfam00219  19 AGVVLDGCGCCKVCARQEGEPCGVYTPPCGKGLRC 53
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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