|
Name |
Accession |
Description |
Interval |
E-value |
| SWIRM-assoc_2 |
pfam16496 |
SWIRM-associated domain at the N-terminal; Much of the higher eukaryote SWI/SNF complex ... |
4-420 |
0e+00 |
|
SWIRM-associated domain at the N-terminal; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
:
Pssm-ID: 465143 Cd Length: 412 Bit Score: 762.27 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 4 RKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLD 83
Cdd:pfam16496 1 RKKDGGPNVKFFESPETLAQLESVRQWLGKNYKKYVQADPPTNKSLATLVVQLLQFQEDAFGKNVSKPPLTRLPMKCFLD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 84 FKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRH 163
Cdd:pfam16496 81 FKPGGGLCHILATAYKFKSEQGWRRFDFQNPSRMDRNVEMFMNIEKALVQNNCLTRPVIYIRPDVDKKLASKLKDIIKRH 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 164 QGTVTEDKNNASHVVYPVPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAKWIL 243
Cdd:pfam16496 161 QGTITEDEEDATHIVYPPPPDPEEEEWARPVMKRDKQVLVHWYYFPDSYDTWVPSSDVDLPVDDPPTPEKPWRVHAKWLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 244 DTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKtltDEVNSPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPstP 323
Cdd:pfam16496 241 DLDQYNEWMNEEDYEVDENGKKKSHRQRISVE---DEMSSPDPDRKDKKSSPGKKRKRSPSPPPTPVGKKKSGRKGS--P 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 324 YTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNK 403
Cdd:pfam16496 316 ARRKKRRREEEEEEDLTKDMEDPTPVPNIEEVNLPKNVNSKKDSENQPVKGGTMTDLDEQEDDKVESGGKEDEEGGKTSK 395
|
410
....*....|....*..
gi 2462534010 404 GEQTKNPDLHEDNVTEQ 420
Cdd:pfam16496 396 GEGSRLSDEHEDNVTEQ 412
|
|
| RSC8 super family |
cl34960 |
RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / ... |
379-708 |
6.82e-81 |
|
RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription];
The actual alignment was detected with superfamily member COG5259:
Pssm-ID: 227584 [Multi-domain] Cd Length: 531 Bit Score: 274.46 E-value: 6.82e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 379 DLDEQEDESMETTGkdeDENSTGNKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKT 458
Cdd:COG5259 10 DSGEERNEQSAEIM---DHSKSANEKKTTILRVEAETFLMEQTHPIIIPSYAEWFDGSKIHEIEKRSNPEFFNGRSPSKT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 459 PEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTP 538
Cdd:COG5259 87 PEVYKDYRNFMINSYRLNPNEYLTVTACRRNVAGDVAAIVRVHRFLEKWGLINYQVDPGTRPSTIGPPLTSHFQDLHDTP 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 539 SGLVPLQPKTPQQTSASQQMLNFPDKGKEKPTDMQ---------------------------------NFG----LRTDM 581
Cdd:COG5259 167 RGLSPFLPWGPINQRVLGAKEIEYETHKEENYSPSlkspkkesqgkvdelkdhsekhpsscsccgnksFNTryhnLRAEK 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 582 YT------KKNV-PSKS------KAAASATRE---WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIE 645
Cdd:COG5259 247 YNscsecyDQGRfPSEFtssdfkPVTISLLIRdknWSRQELLLLLEGIEMYGDDWDKVARHVGTKTKEQCILHFLQLPIE 326
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462534010 646 DPYLEDSEASlGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAS----AAAKSALEEFSKMKEEVP 708
Cdd:COG5259 327 DNYLSKGDGK-GDNSKGRLPFDGSENPVLSTISFLAGIVNPRVQSekqrAIIKSGKISHINRESQEH 392
|
|
| SWIRM-assoc_3 |
pfam16498 |
SWIRM-associated domain at the C-terminal; Much of the higher eukaryote SWI/SNF complex ... |
684-750 |
4.86e-34 |
|
SWIRM-associated domain at the C-terminal; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
:
Pssm-ID: 465145 [Multi-domain] Cd Length: 67 Bit Score: 124.77 E-value: 4.86e-34
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462534010 684 VDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPER 750
Cdd:pfam16498 1 VDPRVAAAAAKAAMEEFSKIKEEVPPALVEAHVKNVEEAAKKGGKVDPAFGLEKSGIAGTDPEEPEK 67
|
|
| SWIRM-assoc_1 |
pfam16495 |
SWIRM-associated region 1; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 ... |
880-946 |
3.03e-31 |
|
SWIRM-associated region 1; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
:
Pssm-ID: 465142 [Multi-domain] Cd Length: 84 Bit Score: 117.23 E-value: 3.03e-31
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462534010 880 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRA 946
Cdd:pfam16495 18 EEREIQRLVALLVETQLKKLELKLKQFEELEKLLERERRQLERQRQQLFLERLAFKKQRLEVAEKLA 84
|
|
| PTZ00121 super family |
cl31754 |
MAEBL; Provisional |
690-947 |
2.81e-07 |
|
MAEBL; Provisional
The actual alignment was detected with superfamily member PTZ00121:
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 55.15 E-value: 2.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 690 SAAAKSALEEFSKMKEEVPTAlVEA-----HVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQ 764
Cdd:PTZ00121 1413 AAAAKKKADEAKKKAEEKKKA-DEAkkkaeEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKK 1491
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 765 ATDEKKEPKEPREgggaiEEEAKEKTSEApKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQ--EEVLKEVVESE 842
Cdd:PTZ00121 1492 AEEAKKKADEAKK-----AAEAKKKADEA-KKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKkaEELKKAEEKKK 1565
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 843 GERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEiKLRHFEELETIMDREREALEY 922
Cdd:PTZ00121 1566 AEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAE-ELKKAEEEKKKVEQLKKKEAE 1644
|
250 260
....*....|....*....|....*
gi 2462534010 923 QRQQLLADRQAFHMEQLKYAEMRAR 947
Cdd:PTZ00121 1645 EKKKAEELKKAEEENKIKAAEEAKK 1669
|
|
| PRK07003 super family |
cl35530 |
DNA polymerase III subunit gamma/tau; |
975-1110 |
2.77e-04 |
|
DNA polymerase III subunit gamma/tau;
The actual alignment was detected with superfamily member PRK07003:
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 45.23 E-value: 2.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 975 TGAAGPPAVHGLAVAPASVVPA-PAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPN 1053
Cdd:PRK07003 397 PAVTAVTGAAGAALAPKAAAAAaATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGS 476
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 2462534010 1054 QQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPD-PGTPLPPDPTAPS 1110
Cdd:PRK07003 477 ASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDaPAAAAPPAPEARP 534
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| SWIRM-assoc_2 |
pfam16496 |
SWIRM-associated domain at the N-terminal; Much of the higher eukaryote SWI/SNF complex ... |
4-420 |
0e+00 |
|
SWIRM-associated domain at the N-terminal; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
Pssm-ID: 465143 Cd Length: 412 Bit Score: 762.27 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 4 RKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLD 83
Cdd:pfam16496 1 RKKDGGPNVKFFESPETLAQLESVRQWLGKNYKKYVQADPPTNKSLATLVVQLLQFQEDAFGKNVSKPPLTRLPMKCFLD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 84 FKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRH 163
Cdd:pfam16496 81 FKPGGGLCHILATAYKFKSEQGWRRFDFQNPSRMDRNVEMFMNIEKALVQNNCLTRPVIYIRPDVDKKLASKLKDIIKRH 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 164 QGTVTEDKNNASHVVYPVPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAKWIL 243
Cdd:pfam16496 161 QGTITEDEEDATHIVYPPPPDPEEEEWARPVMKRDKQVLVHWYYFPDSYDTWVPSSDVDLPVDDPPTPEKPWRVHAKWLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 244 DTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKtltDEVNSPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPstP 323
Cdd:pfam16496 241 DLDQYNEWMNEEDYEVDENGKKKSHRQRISVE---DEMSSPDPDRKDKKSSPGKKRKRSPSPPPTPVGKKKSGRKGS--P 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 324 YTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNK 403
Cdd:pfam16496 316 ARRKKRRREEEEEEDLTKDMEDPTPVPNIEEVNLPKNVNSKKDSENQPVKGGTMTDLDEQEDDKVESGGKEDEEGGKTSK 395
|
410
....*....|....*..
gi 2462534010 404 GEQTKNPDLHEDNVTEQ 420
Cdd:pfam16496 396 GEGSRLSDEHEDNVTEQ 412
|
|
| RSC8 |
COG5259 |
RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / ... |
379-708 |
6.82e-81 |
|
RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription];
Pssm-ID: 227584 [Multi-domain] Cd Length: 531 Bit Score: 274.46 E-value: 6.82e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 379 DLDEQEDESMETTGkdeDENSTGNKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKT 458
Cdd:COG5259 10 DSGEERNEQSAEIM---DHSKSANEKKTTILRVEAETFLMEQTHPIIIPSYAEWFDGSKIHEIEKRSNPEFFNGRSPSKT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 459 PEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTP 538
Cdd:COG5259 87 PEVYKDYRNFMINSYRLNPNEYLTVTACRRNVAGDVAAIVRVHRFLEKWGLINYQVDPGTRPSTIGPPLTSHFQDLHDTP 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 539 SGLVPLQPKTPQQTSASQQMLNFPDKGKEKPTDMQ---------------------------------NFG----LRTDM 581
Cdd:COG5259 167 RGLSPFLPWGPINQRVLGAKEIEYETHKEENYSPSlkspkkesqgkvdelkdhsekhpsscsccgnksFNTryhnLRAEK 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 582 YT------KKNV-PSKS------KAAASATRE---WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIE 645
Cdd:COG5259 247 YNscsecyDQGRfPSEFtssdfkPVTISLLIRdknWSRQELLLLLEGIEMYGDDWDKVARHVGTKTKEQCILHFLQLPIE 326
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462534010 646 DPYLEDSEASlGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAS----AAAKSALEEFSKMKEEVP 708
Cdd:COG5259 327 DNYLSKGDGK-GDNSKGRLPFDGSENPVLSTISFLAGIVNPRVQSekqrAIIKSGKISHINRESQEH 392
|
|
| SWIRM |
pfam04433 |
SWIRM domain; This SWIRM domain is a small alpha-helical domain of about 85 amino acid ... |
433-512 |
7.19e-37 |
|
SWIRM domain; This SWIRM domain is a small alpha-helical domain of about 85 amino acid residues found in chromosomal proteins. It contains a helix-turn helix motif and binds to DNA.
Pssm-ID: 461307 [Multi-domain] Cd Length: 78 Bit Score: 133.07 E-value: 7.19e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 433 FDYNSVHAIERRALPEFFNGKnkSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINY 512
Cdd:pfam04433 1 SDPDKLHPIEKRLLPEFFNGK--SKTPEVYLEIRNFILNLWRENPKEYLTKTDARRALKGDVNLISRIHEFLERWGLINF 78
|
|
| SWIRM-assoc_3 |
pfam16498 |
SWIRM-associated domain at the C-terminal; Much of the higher eukaryote SWI/SNF complex ... |
684-750 |
4.86e-34 |
|
SWIRM-associated domain at the C-terminal; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
Pssm-ID: 465145 [Multi-domain] Cd Length: 67 Bit Score: 124.77 E-value: 4.86e-34
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462534010 684 VDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPER 750
Cdd:pfam16498 1 VDPRVAAAAAKAAMEEFSKIKEEVPPALVEAHVKNVEEAAKKGGKVDPAFGLEKSGIAGTDPEEPEK 67
|
|
| SWIRM-assoc_1 |
pfam16495 |
SWIRM-associated region 1; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 ... |
880-946 |
3.03e-31 |
|
SWIRM-associated region 1; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
Pssm-ID: 465142 [Multi-domain] Cd Length: 84 Bit Score: 117.23 E-value: 3.03e-31
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462534010 880 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRA 946
Cdd:pfam16495 18 EEREIQRLVALLVETQLKKLELKLKQFEELEKLLERERRQLERQRQQLFLERLAFKKQRLEVAEKLA 84
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
690-947 |
2.81e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 55.15 E-value: 2.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 690 SAAAKSALEEFSKMKEEVPTAlVEA-----HVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQ 764
Cdd:PTZ00121 1413 AAAAKKKADEAKKKAEEKKKA-DEAkkkaeEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKK 1491
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 765 ATDEKKEPKEPREgggaiEEEAKEKTSEApKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQ--EEVLKEVVESE 842
Cdd:PTZ00121 1492 AEEAKKKADEAKK-----AAEAKKKADEA-KKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKkaEELKKAEEKKK 1565
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 843 GERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEiKLRHFEELETIMDREREALEY 922
Cdd:PTZ00121 1566 AEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAE-ELKKAEEEKKKVEQLKKKEAE 1644
|
250 260
....*....|....*....|....*
gi 2462534010 923 QRQQLLADRQAFHMEQLKYAEMRAR 947
Cdd:PTZ00121 1645 EKKKAEELKKAEEENKIKAAEEAKK 1669
|
|
| Caldesmon |
pfam02029 |
Caldesmon; |
717-947 |
6.72e-07 |
|
Caldesmon;
Pssm-ID: 460421 [Multi-domain] Cd Length: 495 Bit Score: 53.33 E-value: 6.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 717 RKVEEAAKVTGKADPAFGLESSGIAgttsDEPERIEESGNDEARVEGQATDEKKEPKEpREGGGAIEEEAKEKTSEAPKK 796
Cdd:pfam02029 77 KRLQEALERQKEFDPTIADEKESVA----ERKENNEEEENSSWEKEEKRDSRLGRYKE-EETEIREKEYQENKWSTEVRQ 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 797 DEEKG-KEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKH 875
Cdd:pfam02029 152 AEEEGeEEEDKSEEAEEVPTENFAKEEVKDEKIKKEKKVKYESKVFLDQKRGHPEVKSQNGEEEVTKLKVTTKRRQGGLS 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 876 LAAVEERKIKSLVallvETQMKKLEIKLRH---------------------FEELETIMDREREALEYQRQQllaDRQAF 934
Cdd:pfam02029 232 QSQEREEEAEVFL----EAEQKLEELRRRRqekeseefeklrqkqqeaeleLEELKKKREERRKLLEEEEQR---RKQEE 304
|
250
....*....|...
gi 2462534010 935 HMEQLKYAEMRAR 947
Cdd:pfam02029 305 AERKLREEEEKRR 317
|
|
| CHROMO |
smart00298 |
Chromatin organization modifier domain; |
187-222 |
3.78e-05 |
|
Chromatin organization modifier domain;
Pssm-ID: 214605 [Multi-domain] Cd Length: 55 Bit Score: 42.20 E-value: 3.78e-05
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 2462534010 187 EEEWVRPVMKR-----DKQVLLHWGYYPDSYDTWIPASEIE 222
Cdd:smart00298 1 EYEVEKILDHRwkkkgELEYLVKWKGYSYSEDTWEPEENLL 41
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
975-1110 |
2.77e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 45.23 E-value: 2.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 975 TGAAGPPAVHGLAVAPASVVPA-PAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPN 1053
Cdd:PRK07003 397 PAVTAVTGAAGAALAPKAAAAAaATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGS 476
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 2462534010 1054 QQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPD-PGTPLPPDPTAPS 1110
Cdd:PRK07003 477 ASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDaPAAAAPPAPEARP 534
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
696-852 |
5.80e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 44.22 E-value: 5.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 696 ALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGK--------ADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATD 767
Cdd:TIGR00927 626 ALGDLSKGDVAEAEHTGERTGEEGERPTEAEGEngeesggeAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEAD 705
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 768 EKKEPKEPR---EGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKEseksdGDPIVDPEKEKEPKEGQEEVLKEVVESEGE 844
Cdd:TIGR00927 706 HKGETEAEEvehEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAE-----GKHEVETEGDRKETEHEGETEAEGKEDEDE 780
|
....*...
gi 2462534010 845 RKTKVERD 852
Cdd:TIGR00927 781 GEIQAGED 788
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| SWIRM-assoc_2 |
pfam16496 |
SWIRM-associated domain at the N-terminal; Much of the higher eukaryote SWI/SNF complex ... |
4-420 |
0e+00 |
|
SWIRM-associated domain at the N-terminal; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
Pssm-ID: 465143 Cd Length: 412 Bit Score: 762.27 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 4 RKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLD 83
Cdd:pfam16496 1 RKKDGGPNVKFFESPETLAQLESVRQWLGKNYKKYVQADPPTNKSLATLVVQLLQFQEDAFGKNVSKPPLTRLPMKCFLD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 84 FKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRH 163
Cdd:pfam16496 81 FKPGGGLCHILATAYKFKSEQGWRRFDFQNPSRMDRNVEMFMNIEKALVQNNCLTRPVIYIRPDVDKKLASKLKDIIKRH 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 164 QGTVTEDKNNASHVVYPVPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAKWIL 243
Cdd:pfam16496 161 QGTITEDEEDATHIVYPPPPDPEEEEWARPVMKRDKQVLVHWYYFPDSYDTWVPSSDVDLPVDDPPTPEKPWRVHAKWLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 244 DTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKtltDEVNSPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPstP 323
Cdd:pfam16496 241 DLDQYNEWMNEEDYEVDENGKKKSHRQRISVE---DEMSSPDPDRKDKKSSPGKKRKRSPSPPPTPVGKKKSGRKGS--P 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 324 YTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNK 403
Cdd:pfam16496 316 ARRKKRRREEEEEEDLTKDMEDPTPVPNIEEVNLPKNVNSKKDSENQPVKGGTMTDLDEQEDDKVESGGKEDEEGGKTSK 395
|
410
....*....|....*..
gi 2462534010 404 GEQTKNPDLHEDNVTEQ 420
Cdd:pfam16496 396 GEGSRLSDEHEDNVTEQ 412
|
|
| RSC8 |
COG5259 |
RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / ... |
379-708 |
6.82e-81 |
|
RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription];
Pssm-ID: 227584 [Multi-domain] Cd Length: 531 Bit Score: 274.46 E-value: 6.82e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 379 DLDEQEDESMETTGkdeDENSTGNKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKT 458
Cdd:COG5259 10 DSGEERNEQSAEIM---DHSKSANEKKTTILRVEAETFLMEQTHPIIIPSYAEWFDGSKIHEIEKRSNPEFFNGRSPSKT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 459 PEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTP 538
Cdd:COG5259 87 PEVYKDYRNFMINSYRLNPNEYLTVTACRRNVAGDVAAIVRVHRFLEKWGLINYQVDPGTRPSTIGPPLTSHFQDLHDTP 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 539 SGLVPLQPKTPQQTSASQQMLNFPDKGKEKPTDMQ---------------------------------NFG----LRTDM 581
Cdd:COG5259 167 RGLSPFLPWGPINQRVLGAKEIEYETHKEENYSPSlkspkkesqgkvdelkdhsekhpsscsccgnksFNTryhnLRAEK 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 582 YT------KKNV-PSKS------KAAASATRE---WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIE 645
Cdd:COG5259 247 YNscsecyDQGRfPSEFtssdfkPVTISLLIRdknWSRQELLLLLEGIEMYGDDWDKVARHVGTKTKEQCILHFLQLPIE 326
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462534010 646 DPYLEDSEASlGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAS----AAAKSALEEFSKMKEEVP 708
Cdd:COG5259 327 DNYLSKGDGK-GDNSKGRLPFDGSENPVLSTISFLAGIVNPRVQSekqrAIIKSGKISHINRESQEH 392
|
|
| SWIRM |
pfam04433 |
SWIRM domain; This SWIRM domain is a small alpha-helical domain of about 85 amino acid ... |
433-512 |
7.19e-37 |
|
SWIRM domain; This SWIRM domain is a small alpha-helical domain of about 85 amino acid residues found in chromosomal proteins. It contains a helix-turn helix motif and binds to DNA.
Pssm-ID: 461307 [Multi-domain] Cd Length: 78 Bit Score: 133.07 E-value: 7.19e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 433 FDYNSVHAIERRALPEFFNGKnkSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINY 512
Cdd:pfam04433 1 SDPDKLHPIEKRLLPEFFNGK--SKTPEVYLEIRNFILNLWRENPKEYLTKTDARRALKGDVNLISRIHEFLERWGLINF 78
|
|
| SWIRM-assoc_3 |
pfam16498 |
SWIRM-associated domain at the C-terminal; Much of the higher eukaryote SWI/SNF complex ... |
684-750 |
4.86e-34 |
|
SWIRM-associated domain at the C-terminal; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
Pssm-ID: 465145 [Multi-domain] Cd Length: 67 Bit Score: 124.77 E-value: 4.86e-34
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462534010 684 VDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPER 750
Cdd:pfam16498 1 VDPRVAAAAAKAAMEEFSKIKEEVPPALVEAHVKNVEEAAKKGGKVDPAFGLEKSGIAGTDPEEPEK 67
|
|
| SWIRM-assoc_1 |
pfam16495 |
SWIRM-associated region 1; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 ... |
880-946 |
3.03e-31 |
|
SWIRM-associated region 1; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
Pssm-ID: 465142 [Multi-domain] Cd Length: 84 Bit Score: 117.23 E-value: 3.03e-31
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462534010 880 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRA 946
Cdd:pfam16495 18 EEREIQRLVALLVETQLKKLELKLKQFEELEKLLERERRQLERQRQQLFLERLAFKKQRLEVAEKLA 84
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
690-947 |
2.81e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 55.15 E-value: 2.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 690 SAAAKSALEEFSKMKEEVPTAlVEA-----HVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQ 764
Cdd:PTZ00121 1413 AAAAKKKADEAKKKAEEKKKA-DEAkkkaeEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKK 1491
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 765 ATDEKKEPKEPREgggaiEEEAKEKTSEApKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQ--EEVLKEVVESE 842
Cdd:PTZ00121 1492 AEEAKKKADEAKK-----AAEAKKKADEA-KKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKkaEELKKAEEKKK 1565
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 843 GERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEiKLRHFEELETIMDREREALEY 922
Cdd:PTZ00121 1566 AEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAE-ELKKAEEEKKKVEQLKKKEAE 1644
|
250 260
....*....|....*....|....*
gi 2462534010 923 QRQQLLADRQAFHMEQLKYAEMRAR 947
Cdd:PTZ00121 1645 EKKKAEELKKAEEENKIKAAEEAKK 1669
|
|
| Caldesmon |
pfam02029 |
Caldesmon; |
717-947 |
6.72e-07 |
|
Caldesmon;
Pssm-ID: 460421 [Multi-domain] Cd Length: 495 Bit Score: 53.33 E-value: 6.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 717 RKVEEAAKVTGKADPAFGLESSGIAgttsDEPERIEESGNDEARVEGQATDEKKEPKEpREGGGAIEEEAKEKTSEAPKK 796
Cdd:pfam02029 77 KRLQEALERQKEFDPTIADEKESVA----ERKENNEEEENSSWEKEEKRDSRLGRYKE-EETEIREKEYQENKWSTEVRQ 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 797 DEEKG-KEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKH 875
Cdd:pfam02029 152 AEEEGeEEEDKSEEAEEVPTENFAKEEVKDEKIKKEKKVKYESKVFLDQKRGHPEVKSQNGEEEVTKLKVTTKRRQGGLS 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 876 LAAVEERKIKSLVallvETQMKKLEIKLRH---------------------FEELETIMDREREALEYQRQQllaDRQAF 934
Cdd:pfam02029 232 QSQEREEEAEVFL----EAEQKLEELRRRRqekeseefeklrqkqqeaeleLEELKKKREERRKLLEEEEQR---RKQEE 304
|
250
....*....|...
gi 2462534010 935 HMEQLKYAEMRAR 947
Cdd:pfam02029 305 AERKLREEEEKRR 317
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
688-947 |
3.26e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.21 E-value: 3.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 688 VASAAAKSALEEFSKMKEEVPTALveahvRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERIEEsgndeARVEGQATD 767
Cdd:PTZ00121 1557 LKKAEEKKKAEEAKKAEEDKNMAL-----RKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEE-----AKIKAEELK 1626
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 768 EKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEvvesEGERKT 847
Cdd:PTZ00121 1627 KAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKK----EAEEAK 1702
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 848 KVERdigegnlstAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQL 927
Cdd:PTZ00121 1703 KAEE---------LKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEI 1773
|
250 260
....*....|....*....|
gi 2462534010 928 LADRQAFHMEQLKYAEMRAR 947
Cdd:PTZ00121 1774 RKEKEAVIEEELDEEDEKRR 1793
|
|
| CHROMO |
smart00298 |
Chromatin organization modifier domain; |
187-222 |
3.78e-05 |
|
Chromatin organization modifier domain;
Pssm-ID: 214605 [Multi-domain] Cd Length: 55 Bit Score: 42.20 E-value: 3.78e-05
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 2462534010 187 EEEWVRPVMKR-----DKQVLLHWGYYPDSYDTWIPASEIE 222
Cdd:smart00298 1 EYEVEKILDHRwkkkgELEYLVKWKGYSYSEDTWEPEENLL 41
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
698-850 |
1.46e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.29 E-value: 1.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 698 EEFSKMKEEVPTAlveAHVRKVEEAAKVTGKADPAFGLESSGIAGT---TSDEPERIEESGN-DEARV--EGQATDE-KK 770
Cdd:PTZ00121 1233 EEAKKDAEEAKKA---EEERNNEEIRKFEEARMAHFARRQAAIKAEearKADELKKAEEKKKaDEAKKaeEKKKADEaKK 1309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 771 EPKEPREGGGAIE--EEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLK---EVVESEGER 845
Cdd:PTZ00121 1310 KAEEAKKADEAKKkaEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKkkaDAAKKKAEE 1389
|
....*
gi 2462534010 846 KTKVE 850
Cdd:PTZ00121 1390 KKKAD 1394
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
694-853 |
1.82e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.90 E-value: 1.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 694 KSALEEFSKMKEEVPTALVEAHVRKVEEAAKV---TGKADPAFGLESSgiAGTTSDEPERIEESGNDEARVEGQATDEKK 770
Cdd:PTZ00121 1639 KKKEAEEKKKAEELKKAEEENKIKAAEEAKKAeedKKKAEEAKKAEED--EKKAAEALKKEAEEAKKAEELKKKEAEEKK 1716
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 771 EPKEPREGggaiEEEAKEKTSEAPKKDEEKGKEGDS----EKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGE-R 845
Cdd:PTZ00121 1717 KAEELKKA----EEENKIKAEEAKKEAEEDKKKAEEakkdEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEkR 1792
|
....*...
gi 2462534010 846 KTKVERDI 853
Cdd:PTZ00121 1793 RMEVDKKI 1800
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
975-1110 |
2.77e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 45.23 E-value: 2.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 975 TGAAGPPAVHGLAVAPASVVPA-PAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPN 1053
Cdd:PRK07003 397 PAVTAVTGAAGAALAPKAAAAAaATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGS 476
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 2462534010 1054 QQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPD-PGTPLPPDPTAPS 1110
Cdd:PRK07003 477 ASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDaPAAAAPPAPEARP 534
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
691-943 |
5.54e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.36 E-value: 5.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 691 AAAKSALEEFSKMKEEVPTAlvEAHVRKVEEAAKvtgKADPAfglessgiaGTTSDEPERIEESGNDEARvegQATDEKK 770
Cdd:PTZ00121 1298 AEEKKKADEAKKKAEEAKKA--DEAKKKAEEAKK---KADAA---------KKKAEEAKKAAEAAKAEAE---AAADEAE 1360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 771 EPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESE--KSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTK 848
Cdd:PTZ00121 1361 AAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEedKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKA 1440
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 849 VERDIGEgnlstaAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQ--Q 926
Cdd:PTZ00121 1441 EEAKKAD------EAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKadE 1514
|
250
....*....|....*..
gi 2462534010 927 LLADRQAFHMEQLKYAE 943
Cdd:PTZ00121 1515 AKKAEEAKKADEAKKAE 1531
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
696-852 |
5.80e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 44.22 E-value: 5.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 696 ALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGK--------ADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATD 767
Cdd:TIGR00927 626 ALGDLSKGDVAEAEHTGERTGEEGERPTEAEGEngeesggeAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEAD 705
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 768 EKKEPKEPR---EGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKEseksdGDPIVDPEKEKEPKEGQEEVLKEVVESEGE 844
Cdd:TIGR00927 706 HKGETEAEEvehEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAE-----GKHEVETEGDRKETEHEGETEAEGKEDEDE 780
|
....*...
gi 2462534010 845 RKTKVERD 852
Cdd:TIGR00927 781 GEIQAGED 788
|
|
| Myb_DNA-binding |
pfam00249 |
Myb-like DNA-binding domain; This family contains the DNA binding domains from Myb proteins, ... |
615-642 |
7.65e-04 |
|
Myb-like DNA-binding domain; This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family.
Pssm-ID: 459731 [Multi-domain] Cd Length: 46 Bit Score: 38.25 E-value: 7.65e-04
10 20
....*....|....*....|....*...
gi 2462534010 615 MYKDDWNKVSEHVGSRTQDECILHFLRL 642
Cdd:pfam00249 18 KLGNRWKKIAKLLPGRTDNQCKNRWQNY 45
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
671-850 |
1.20e-03 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 42.66 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 671 NPVMSTVAFLASVV------DPRVASAAAKSALEEFSKMKEEVPTALVEAhvrKVEEAAKVTGKADPafGLESSGIAGTT 744
Cdd:PRK13108 257 NSFTSTFVFIGAVVyiilapKGREAPGALRGSEYVVDEALEREPAELAAA---AVASAASAVGPVGP--GEPNQPDDVAE 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 745 SDEPERIEESGNDEARVEGQ----------ATDEKKEPKEPREGGGAIEEEAkektSEAPKKDEEKGKEGDSE---KESE 811
Cdd:PRK13108 332 AVKAEVAEVTDEVAAESVVQvadrdgestpAVEETSEADIEREQPGDLAGQA----PAAHQVDAEAASAAPEEpaaLASE 407
|
170 180 190
....*....|....*....|....*....|....*....
gi 2462534010 812 KSDGDPIVDPEKEkEPKEGQEEVLKEVVESEGERKTKVE 850
Cdd:PRK13108 408 AHDETEPEVPEKA-APIPDPAKPDELAVAGPGDDPAEPD 445
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
714-932 |
1.52e-03 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 42.68 E-value: 1.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 714 AHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKE---PREGGGAIEEEAKEKT 790
Cdd:TIGR00927 622 AKVMALGDLSKGDVAEAEHTGERTGEEGERPTEAEGENGEESGGEAEQEGETETKGENESEgeiPAERKGEQEGEGEIEA 701
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 791 SEAPKKDEEKGKEGDSEKESEkSDGDpivDPEKEKEPKEGQEEVLKEV---VESEGERKTKVERDIGEGNLSTAAAAALA 867
Cdd:TIGR00927 702 KEADHKGETEAEEVEHEGETE-AEGT---EDEGEIETGEEGEEVEDEGegeAEGKHEVETEGDRKETEHEGETEAEGKED 777
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462534010 868 AAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQ 932
Cdd:TIGR00927 778 EDEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQ 842
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
738-856 |
8.28e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 39.95 E-value: 8.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 738 SGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREG-GGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGD 816
Cdd:PHA03169 102 SPTPSPSGSAEELASGLSPENTSGSSPESPASHSPPPSPPShPGPHEPAPPESHNPSPNQQPSSFLQPSHEDSPEEPEPP 181
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 2462534010 817 PIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEG 856
Cdd:PHA03169 182 TSEPEPDSPGPPQSETPTSSPPPQSPPDEPGEPQSPTPQQ 221
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
969-1110 |
9.72e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 39.97 E-value: 9.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462534010 969 SQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGP 1048
Cdd:PRK07764 622 AAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQP 701
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462534010 1049 SPFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPS 1110
Cdd:PRK07764 702 APAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPA 763
|
|
| |
