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Conserved domains on  [gi|528511863|ref|XP_696711|]
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acyl-coenzyme A thioesterase 1 [Danio rerio]

Protein Classification

acyl-CoA thioesterase/bile acid-CoA:amino acid N-acyltransferase family protein( domain architecture ID 10521460)

acyl-CoA thioesterase/bile acid-CoA:amino acid N-acyltransferase (BAAT) family protein may catalyze the hydrolysis of acyl-CoA or catalyze the amidation of bile acids with the amino acids taurine and glycine

CATH:  3.40.50.1820
EC:  3.-.-.-
Gene Ontology:  GO:0016787
PubMed:  19508187|12369917
SCOP:  3000102

Graphical summary

 Zoom to residue level

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Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
BAAT_C pfam08840
BAAT / Acyl-CoA thioester hydrolase C terminal; This catalytic domain is found at the C ...
221-430 9.02e-113

BAAT / Acyl-CoA thioester hydrolase C terminal; This catalytic domain is found at the C terminal of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases (BAAT).


:

Pssm-ID: 430252 [Multi-domain]  Cd Length: 211  Bit Score: 330.01  E-value: 9.02e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863  221 FHLEYFEEGIDFLRQQPEVKGQKIGLVSISKSGDLALSMATFLPDIAATIWVNGCNANTLVPVYYKDICVPPLLFDVKRT 300
Cdd:pfam08840   1 VDLEYFEEAINYLLRHPKVKGPGIGLLGISKGGELALSMATFLKQITATVSINGSAVVSGDPLVYKDNPLPPLGEGMRRI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863  301 KITPLGLVDIGEVMDDPMSKEGLPSVIPIERAPGSFMFVVSEADRNWRSAYYAKLACDRLKAHGKN-NYQLVKYEKAGHF 379
Cdd:pfam08840  81 KVNKDGLLDIRDMFNDPLSKPDPKSLIPVERAKGPFLFVVGQDDHNWPSVFYAKKACERLQKHGKEvEVQLVCYPGAGHL 160
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 528511863  380 IEVPYMPFCLANFHGVAGQPVFFGGEPKAHAEAQLDAWPKMINFFKKHLAA 430
Cdd:pfam08840 161 IEPPYFPHCGASFHALVGMPVLWGGEPKAHAKAQEDAWKKIQAFFHKHLGG 211
Bile_Hydr_Trans pfam04775
Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini ...
39-159 1.16e-43

Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini of acyl-CoA thioester hydrolase and bile acid-CoA:amino acid N-acetyltransferase (BAAT). This region is not thought to contain the active site of either enzyme. Thioesterase isoforms have been identified in peroxisomes, cytoplasm and mitochondria, where they are thought to have distinct functions in lipid metabolism. For example, in peroxisomes, the hydrolase acts on bile-CoA esters.


:

Pssm-ID: 461422  Cd Length: 127  Bit Score: 149.31  E-value: 1.16e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863   39 EDPVHVTVSGLNPHQRVDLRSKITDENGLDFKASATYQADDSGQIDLKRDSSLGGSFTGVEPMGLYWALKADTIS-CKFT 117
Cdd:pfam04775   1 DEPVHIRVSGLPPGQPVTLRALLTDEKGGLFESYAVYRADENGEVDLSRDAPLGGSYTGVDPMGLFWSMKPEPGFrPRLY 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 528511863  118 LSDVTR-PALVDIEV----VSDDKVLAKVTNERHCLTDGVRRSPVTE 159
Cdd:pfam04775  81 KRDVLPtPFVVTLSVydgsEESGKPLASVTVERWYMAPGVRRIEVRE 127
FrsA super family cl27027
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; ...
161-270 5.85e-09

Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms];


The actual alignment was detected with superfamily member COG1073:

Pssm-ID: 440691 [Multi-domain]  Cd Length: 253  Bit Score: 56.46  E-value: 5.85e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863 161 RIRGTLFMPPG-KGPFPGILdtnVFRG--APFE---LRAALLAKRGFAVLA--LAFQG-------YQDLPKRADrfhley 225
Cdd:COG1073   22 KLAGDLYLPAGaSKKYPAVV---VAHGngGVKEqraLYAQRLAELGFNVLAfdYRGYGesegeprEEGSPERRD------ 92
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 528511863 226 FEEGIDFLRQQPEVKGQKIGLVSISKSGDLALSMATFLPDIAATI 270
Cdd:COG1073   93 ARAAVDYLRTLPGVDPERIGLLGISLGGGYALNAAATDPRVKAVI 137
 
Name Accession Description Interval E-value
BAAT_C pfam08840
BAAT / Acyl-CoA thioester hydrolase C terminal; This catalytic domain is found at the C ...
221-430 9.02e-113

BAAT / Acyl-CoA thioester hydrolase C terminal; This catalytic domain is found at the C terminal of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases (BAAT).


Pssm-ID: 430252 [Multi-domain]  Cd Length: 211  Bit Score: 330.01  E-value: 9.02e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863  221 FHLEYFEEGIDFLRQQPEVKGQKIGLVSISKSGDLALSMATFLPDIAATIWVNGCNANTLVPVYYKDICVPPLLFDVKRT 300
Cdd:pfam08840   1 VDLEYFEEAINYLLRHPKVKGPGIGLLGISKGGELALSMATFLKQITATVSINGSAVVSGDPLVYKDNPLPPLGEGMRRI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863  301 KITPLGLVDIGEVMDDPMSKEGLPSVIPIERAPGSFMFVVSEADRNWRSAYYAKLACDRLKAHGKN-NYQLVKYEKAGHF 379
Cdd:pfam08840  81 KVNKDGLLDIRDMFNDPLSKPDPKSLIPVERAKGPFLFVVGQDDHNWPSVFYAKKACERLQKHGKEvEVQLVCYPGAGHL 160
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 528511863  380 IEVPYMPFCLANFHGVAGQPVFFGGEPKAHAEAQLDAWPKMINFFKKHLAA 430
Cdd:pfam08840 161 IEPPYFPHCGASFHALVGMPVLWGGEPKAHAKAQEDAWKKIQAFFHKHLGG 211
Bile_Hydr_Trans pfam04775
Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini ...
39-159 1.16e-43

Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini of acyl-CoA thioester hydrolase and bile acid-CoA:amino acid N-acetyltransferase (BAAT). This region is not thought to contain the active site of either enzyme. Thioesterase isoforms have been identified in peroxisomes, cytoplasm and mitochondria, where they are thought to have distinct functions in lipid metabolism. For example, in peroxisomes, the hydrolase acts on bile-CoA esters.


Pssm-ID: 461422  Cd Length: 127  Bit Score: 149.31  E-value: 1.16e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863   39 EDPVHVTVSGLNPHQRVDLRSKITDENGLDFKASATYQADDSGQIDLKRDSSLGGSFTGVEPMGLYWALKADTIS-CKFT 117
Cdd:pfam04775   1 DEPVHIRVSGLPPGQPVTLRALLTDEKGGLFESYAVYRADENGEVDLSRDAPLGGSYTGVDPMGLFWSMKPEPGFrPRLY 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 528511863  118 LSDVTR-PALVDIEV----VSDDKVLAKVTNERHCLTDGVRRSPVTE 159
Cdd:pfam04775  81 KRDVLPtPFVVTLSVydgsEESGKPLASVTVERWYMAPGVRRIEVRE 127
DLH COG0412
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];
160-425 2.80e-17

Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440181 [Multi-domain]  Cd Length: 226  Bit Score: 80.40  E-value: 2.80e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863 160 GRIRGTLFMPPGKGPFPGILdtnVF-----RGAPFELRAALLAKRGFAVLALAFQGYQDLPKRADRFH-----------L 223
Cdd:COG0412   14 VTLPGYLARPAGGGPRPGVV---VLheifgLNPHIRDVARRLAAAGYVVLAPDLYGRGGPGDDPDEARalmgaldpellA 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863 224 EYFEEGIDFLRQQPEVKGQKIGLVSISKSGDLALSMATFLPDIAATIWVNGCNANTLVPVYYKDICVPPLLFdvkrtkit 303
Cdd:COG0412   91 ADLRAALDWLKAQPEVDAGRVGVVGFCFGGGLALLAAARGPDLAAAVSFYGGLPADDLLDLAARIKAPVLLL-------- 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863 304 plglvdIGEvmDDPMskeglpsvIPIERAPgsfmfvvseadrnwrsAYYAklacdRLKAHGKnNYQLVKYEKAGHFIEVP 383
Cdd:COG0412  163 ------YGE--KDPL--------VPPEQVA----------------ALEA-----ALAAAGV-DVELHVYPGAGHGFTNP 204
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 528511863 384 ympfclanfhgvagqpvffgGEPKAHAEAQLDAWPKMINFFK 425
Cdd:COG0412  205 --------------------GRPRYDPAAAEDAWQRTLAFLA 226
FrsA COG1073
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; ...
161-270 5.85e-09

Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms];


Pssm-ID: 440691 [Multi-domain]  Cd Length: 253  Bit Score: 56.46  E-value: 5.85e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863 161 RIRGTLFMPPG-KGPFPGILdtnVFRG--APFE---LRAALLAKRGFAVLA--LAFQG-------YQDLPKRADrfhley 225
Cdd:COG1073   22 KLAGDLYLPAGaSKKYPAVV---VAHGngGVKEqraLYAQRLAELGFNVLAfdYRGYGesegeprEEGSPERRD------ 92
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 528511863 226 FEEGIDFLRQQPEVKGQKIGLVSISKSGDLALSMATFLPDIAATI 270
Cdd:COG1073   93 ARAAVDYLRTLPGVDPERIGLLGISLGGGYALNAAATDPRVKAVI 137
 
Name Accession Description Interval E-value
BAAT_C pfam08840
BAAT / Acyl-CoA thioester hydrolase C terminal; This catalytic domain is found at the C ...
221-430 9.02e-113

BAAT / Acyl-CoA thioester hydrolase C terminal; This catalytic domain is found at the C terminal of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases (BAAT).


Pssm-ID: 430252 [Multi-domain]  Cd Length: 211  Bit Score: 330.01  E-value: 9.02e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863  221 FHLEYFEEGIDFLRQQPEVKGQKIGLVSISKSGDLALSMATFLPDIAATIWVNGCNANTLVPVYYKDICVPPLLFDVKRT 300
Cdd:pfam08840   1 VDLEYFEEAINYLLRHPKVKGPGIGLLGISKGGELALSMATFLKQITATVSINGSAVVSGDPLVYKDNPLPPLGEGMRRI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863  301 KITPLGLVDIGEVMDDPMSKEGLPSVIPIERAPGSFMFVVSEADRNWRSAYYAKLACDRLKAHGKN-NYQLVKYEKAGHF 379
Cdd:pfam08840  81 KVNKDGLLDIRDMFNDPLSKPDPKSLIPVERAKGPFLFVVGQDDHNWPSVFYAKKACERLQKHGKEvEVQLVCYPGAGHL 160
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 528511863  380 IEVPYMPFCLANFHGVAGQPVFFGGEPKAHAEAQLDAWPKMINFFKKHLAA 430
Cdd:pfam08840 161 IEPPYFPHCGASFHALVGMPVLWGGEPKAHAKAQEDAWKKIQAFFHKHLGG 211
Bile_Hydr_Trans pfam04775
Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini ...
39-159 1.16e-43

Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini of acyl-CoA thioester hydrolase and bile acid-CoA:amino acid N-acetyltransferase (BAAT). This region is not thought to contain the active site of either enzyme. Thioesterase isoforms have been identified in peroxisomes, cytoplasm and mitochondria, where they are thought to have distinct functions in lipid metabolism. For example, in peroxisomes, the hydrolase acts on bile-CoA esters.


Pssm-ID: 461422  Cd Length: 127  Bit Score: 149.31  E-value: 1.16e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863   39 EDPVHVTVSGLNPHQRVDLRSKITDENGLDFKASATYQADDSGQIDLKRDSSLGGSFTGVEPMGLYWALKADTIS-CKFT 117
Cdd:pfam04775   1 DEPVHIRVSGLPPGQPVTLRALLTDEKGGLFESYAVYRADENGEVDLSRDAPLGGSYTGVDPMGLFWSMKPEPGFrPRLY 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 528511863  118 LSDVTR-PALVDIEV----VSDDKVLAKVTNERHCLTDGVRRSPVTE 159
Cdd:pfam04775  81 KRDVLPtPFVVTLSVydgsEESGKPLASVTVERWYMAPGVRRIEVRE 127
DLH COG0412
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];
160-425 2.80e-17

Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440181 [Multi-domain]  Cd Length: 226  Bit Score: 80.40  E-value: 2.80e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863 160 GRIRGTLFMPPGKGPFPGILdtnVF-----RGAPFELRAALLAKRGFAVLALAFQGYQDLPKRADRFH-----------L 223
Cdd:COG0412   14 VTLPGYLARPAGGGPRPGVV---VLheifgLNPHIRDVARRLAAAGYVVLAPDLYGRGGPGDDPDEARalmgaldpellA 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863 224 EYFEEGIDFLRQQPEVKGQKIGLVSISKSGDLALSMATFLPDIAATIWVNGCNANTLVPVYYKDICVPPLLFdvkrtkit 303
Cdd:COG0412   91 ADLRAALDWLKAQPEVDAGRVGVVGFCFGGGLALLAAARGPDLAAAVSFYGGLPADDLLDLAARIKAPVLLL-------- 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863 304 plglvdIGEvmDDPMskeglpsvIPIERAPgsfmfvvseadrnwrsAYYAklacdRLKAHGKnNYQLVKYEKAGHFIEVP 383
Cdd:COG0412  163 ------YGE--KDPL--------VPPEQVA----------------ALEA-----ALAAAGV-DVELHVYPGAGHGFTNP 204
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 528511863 384 ympfclanfhgvagqpvffgGEPKAHAEAQLDAWPKMINFFK 425
Cdd:COG0412  205 --------------------GRPRYDPAAAEDAWQRTLAFLA 226
DAP2 COG1506
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
161-428 4.96e-16

Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];


Pssm-ID: 441115 [Multi-domain]  Cd Length: 234  Bit Score: 76.98  E-value: 4.96e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863 161 RIRGTLFMPPGKGPFPGILdtnVFRGAP------FELRAALLAKRGFAVLALAFQGYQDLPKRADRFHLEYFEEGIDFLR 234
Cdd:COG1506    9 TLPGWLYLPADGKKYPVVV---YVHGGPgsrddsFLPLAQALASRGYAVLAPDYRGYGESAGDWGGDEVDDVLAAIDYLA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863 235 QQPEVKGQKIGLVSISKSGDLALSMATFLPDIAATIWVNGCNAN-----TLVPVYYKDICVPPLLFDVKRTKITPLGLVD 309
Cdd:COG1506   86 ARPYVDPDRIGIYGHSYGGYMALLAAARHPDRFKAAVALAGVSDlrsyyGTTREYTERLMGGPWEDPEAYAARSPLAYAD 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863 310 igevmddpmskeglpsvipieRAPGSFMFVVSEADRNWrSAYYAKLACDRLKAHGKnNYQLVKYEKAGHFIEVPYMPfcl 389
Cdd:COG1506  166 ---------------------KLKTPLLLIHGEADDRV-PPEQAERLYEALKKAGK-PVELLVYPGEGHGFSGAGAP--- 219
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 528511863 390 anfhgvagqpvffggepkahaeaqlDAWPKMINFFKKHL 428
Cdd:COG1506  220 -------------------------DYLERILDFLDRHL 233
FrsA COG1073
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; ...
161-270 5.85e-09

Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms];


Pssm-ID: 440691 [Multi-domain]  Cd Length: 253  Bit Score: 56.46  E-value: 5.85e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863 161 RIRGTLFMPPG-KGPFPGILdtnVFRG--APFE---LRAALLAKRGFAVLA--LAFQG-------YQDLPKRADrfhley 225
Cdd:COG1073   22 KLAGDLYLPAGaSKKYPAVV---VAHGngGVKEqraLYAQRLAELGFNVLAfdYRGYGesegeprEEGSPERRD------ 92
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 528511863 226 FEEGIDFLRQQPEVKGQKIGLVSISKSGDLALSMATFLPDIAATI 270
Cdd:COG1073   93 ARAAVDYLRTLPGVDPERIGLLGISLGGGYALNAAATDPRVKAVI 137
Axe1 COG3458
Cephalosporin-C deacetylase or related acetyl esterase [Secondary metabolites biosynthesis, ...
160-268 6.32e-06

Cephalosporin-C deacetylase or related acetyl esterase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442681 [Multi-domain]  Cd Length: 318  Bit Score: 47.88  E-value: 6.32e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863 160 GRIRGTLFMPPGKGPFPGIL---DTNVFRGAPFElrAALLAKRGFAVLAL---------------------AFQGYQ--D 213
Cdd:COG3458   67 ARIYGWLLRPKGEGPLPAVVefhGYGGGRGLPHE--DLDWAAAGYAVLVMdtrgqgsswgdtpdpggysggALPGYMtrG 144
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 528511863 214 LPKRADRFHLEYFEE---GIDFLRQQPEVKGQKIGLVSISKSGDLALSMATFLPDIAA 268
Cdd:COG3458  145 IDDPDTYYYRRVYLDavrAVDALRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVKA 202
YvaK COG1647
Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];
184-380 1.41e-04

Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 441253 [Multi-domain]  Cd Length: 246  Bit Score: 43.39  E-value: 1.41e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863 184 FRGAPFELR--AALLAKRGFAVLALAFQGY----QDLPK-RADRFhLEYFEEGIDFLRQqpevKGQKIGLVSISKSGDLA 256
Cdd:COG1647   24 FTGSPAEMRplAEALAKAGYTVYAPRLPGHgtspEDLLKtTWEDW-LEDVEEAYEILKA----GYDKVIVIGLSMGGLLA 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528511863 257 LSMATFLPDIAATIWVNgcnantlvpvyykdicvPPLLFDVKRTKITPLG------LVDIGEVMDDPMSKEGLPSVIPIE 330
Cdd:COG1647   99 LLLAARYPDVAGLVLLS-----------------PALKIDDPSAPLLPLLkylarsLRGIGSDIEDPEVAEYAYDRTPLR 161
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 528511863 331 -------------------RAPgsFMFVVSEADR--NWRSAYYAKlacDRLKAHGKnnyQLVKYEKAGHFI 380
Cdd:COG1647  162 alaelqrlirevrrdlpkiTAP--TLIIQSRKDEvvPPESARYIY---ERLGSPDK---ELVWLEDSGHVI 224
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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