|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-347 |
0e+00 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 514.78 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 1 MNPTIFILILMTVMLGTIIVMISSHWLLIWIGFEMNMLTIIPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIIINLTF 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 81 SGQWTATKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTLSIL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 161 SIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSLAHTWNKAPIM 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 241 TILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMRLMYSTTLTMFPSTNNMKMKWQFSTT 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....*..
gi 148543103 321 KRMTLLPTMTVLSTMLLPLTPMLSILE 347
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSILE 347
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
7.73e-137 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 392.63 E-value: 7.73e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 1 MNPTIFILILMTVMLGTIIVMISSHWLLIWIGFEMNMLTIIPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIIINLTF 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 81 SGQWTATKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSiNLNLILTLSIL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 161 SIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSLAHTWNKAPIM 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 241 TILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMRLMYSTTLTMFPSTNNMKMKWQFSTT 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*.
gi 148543103 321 KRMTLLPTMTVLSTMLLPLTPMLSIL 346
Cdd:MTH00135 320 QLTLPLAISTTATLMLLPLTPAILAL 345
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
1.49e-118 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 346.14 E-value: 1.49e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 1 MNPTIFILILMTVMLGTIIVMISSHWLLIWIGFEMNMLTIIPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIIINLTF 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 81 SGQWTATKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTLSIL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 161 SIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSLAHTWNKAPIM 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 241 TILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMRLMYSTTLTMFPSTNNMKMKWQFSTT 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|...
gi 148543103 321 KRMtLLPTMTVLSTMLLPLTPML 343
Cdd:MTH00070 321 TNN-LLSLTIILSLMLLPITPTI 342
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
7.39e-117 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 341.80 E-value: 7.39e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 1 MNPTIFILILMTVMLGTIIVMISSHWLLIWIGFEMNMLTIIPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIIINLTF 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 81 SGQWTATKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTLSIL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 161 SIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSLAHTWNKAPIM 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 241 TILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMRLMYSTTLTMFPSTNNMKMKWQFSTT 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|...
gi 148543103 321 KrMTLLPTMTVLSTMLLPLTPML 343
Cdd:MTH00112 321 K-NTLTATLTTLSTLLLPLSPMI 342
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-340 |
8.06e-95 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 285.67 E-value: 8.06e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 1 MNPTIFILILMTVMLGTIIVMISSHWLLIWIGFEMNMLTIIPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIIINLTF 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 81 SGQWTATKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTLSIL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 161 SIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSLAHTWNKAPIM 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 241 TILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMRLMYSTTLTMFPS-----TNNMKMKW 315
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQhsislFSWRNSGN 320
|
330 340
....*....|....*....|....*
gi 148543103 316 QFSTTKRMTLLPTMTVLSTMLLPLT 340
Cdd:MTH00041 321 ITVYGVILSILSSISILGLLLIPLF 345
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.61e-86 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 264.14 E-value: 2.61e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 1 MNPTIFILILMTVMLGTIIVMISSHWLLIWIGFEMNMLTIIPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIIINLTF 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 81 SGQWTATKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTLSIL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 161 SIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSLAHTWNKAPIM 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 241 TILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMRLMYSTTLTMFPSTNNMKMKWQFSTT 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 148543103 321 KRMtLLPTMTVLSTMLLPLTPMLSIL 346
Cdd:MTH00200 321 SNL-LVGLLLLLSILGLPLTPQLLFL 345
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
6.20e-59 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 193.12 E-value: 6.20e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 1 MNPTIFILILMTVMLGTIIVMISSHWLLIWIGFEMNMLTIIPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIIINLTF 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 81 SgqwtatKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIlpsINLNLILTLSIL 160
Cdd:MTH00160 82 L------MLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 161 SIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSLAHTWNKAPIM 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 241 TILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMRLMYSttlTMFPSTNNMKMKWQFSTT 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYS---SLMLNYNKNKWNLKKKKN 309
|
330 340
....*....|....*....|....*.
gi 148543103 321 KRMTLLPTMTVLSTMLLPLTPMLSIL 346
Cdd:MTH00160 310 KFSLILNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
6-318 |
1.34e-53 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 179.31 E-value: 1.34e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 6 FILILMTVMLGTIIVMISSHWLLIWIGFEMNMLTIIPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIIINLTFSGQWt 85
Cdd:MTH00144 6 NLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW- 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 86 atklfnpTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINL-NLILTLSILSIMI 164
Cdd:MTH00144 85 -------FSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSALV 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 165 GGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYiIMTSTMFTLFMANSTTTTLSLAHTWNKAPIMTILI 244
Cdd:MTH00144 158 GSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIY-IVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGLSI 236
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 148543103 245 LITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMRLMYSTTLTMFPSTNNMKMKWQFS 318
Cdd:MTH00144 237 ISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKVLNS 310
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
8-304 |
1.49e-47 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 163.41 E-value: 1.49e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 8 LILMTVMLGTIIVMISSHWLLIWIGFEMNMLTIIPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIIInltfsgQWTAT 87
Cdd:MTH00011 10 LFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM------MWSFP 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 88 KLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTLSILSIMIGGW 167
Cdd:MTH00011 84 SLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 168 GGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSLAHTWNKAPIMTILILIT 247
Cdd:MTH00011 164 GGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIM 243
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 148543103 248 LLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMRLMYSTTLTM 304
Cdd:MTH00011 244 LLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLS 300
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-300 |
7.90e-37 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 135.18 E-value: 7.90e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 8 LILMTVMLGTIIVMISSHWLLIWIGFEMNMLTIIPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIIinLTFSGQWTAT 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGS--LSFSNLYLSL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 88 klfnpTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLyqILPSINLNLILTLSILSIMIGGW 167
Cdd:MTH00197 80 -----LSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLIL--AFNSSSFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 168 GGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSLAHTWNKAPIMTILILIT 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 148543103 248 LLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMRLMYST 300
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKS 285
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
1-298 |
1.84e-34 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 131.39 E-value: 1.84e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 1 MNPTIFILILMTVMLGTIIVMISSHWLLIWIGFEMNMLTI-IPIMMKKHNPRATEASTKYFLTQSTAS--MLLMMAII-- 75
Cdd:COG1007 99 LLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLyVLVAFRRDDRRSSEAALKYFLLGALSSgfLLYGISLLyg 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 76 ----INLTFSGQWTATKLFNPT----ASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIL- 146
Cdd:COG1007 179 atgsLNLAGIAAALAAGGANSPllllGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLv 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 147 ---PSIN---LNLILTLSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTM----TLLNLIIYIIMTSTMF 216
Cdd:COG1007 259 eafPGLAadwQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLgvsaALFYLLAYLFMNLGAF 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 217 TLFMANST----TTTLS-LAHTWNKAPIMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLF 291
Cdd:COG1007 339 AVILLLSRkggeAEEIEdLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAY 418
|
....*..
gi 148543103 292 FYMRLMY 298
Cdd:COG1007 419 YYLRVVK 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
6-267 |
1.26e-32 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 126.28 E-value: 1.26e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 6 FILILMTVMLGTIIVMISSHWLLIWIGFEMNMLTI-IPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIIINLTFSG-- 82
Cdd:MTH00199 99 SPILILIVALGSLLLVSSINWLSIYLAIELQTLTLfILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGet 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 83 --QWTATKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSInlNLILTLSIL 160
Cdd:MTH00199 179 siQGINSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVT--NVVLICAVL 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 161 SIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNP----TMTLLNLIIYIIMTSTMFTLFMANSTTTTL--SLAHTW 234
Cdd:MTH00199 257 SIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFSIILSLKLTKGLivEVSGLS 336
|
250 260 270
....*....|....*....|....*....|...
gi 148543103 235 NKAPIMTILILITLLSMGGLPPLSGFMPKWMII 267
Cdd:MTH00199 337 RKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
1.51e-32 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 124.37 E-value: 1.51e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 13 VMLGTIIVMISSHWLLIWIGFEMNMLTI-IPIMMKKHNPRATEASTKYFLTQSTASMLLMMAI-------------IINL 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLfILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCallcgttgglhlsYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 79 TFSGQWTATKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTls 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVNILLIGG-- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 159 ILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNP----TMTLLNLIIYIIMTSTMFTLFMANSTTTTL--SLAH 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNVYKNLiiEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 148543103 233 TWNKAPIMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMRL 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-286 |
2.53e-29 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 113.95 E-value: 2.53e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 23 SSHWLLIWIGFEMNMLTIIPIM-MKKHNPRATEASTKYFLTQSTASMLLMMAIIINLTFSGQWTATKLFNPTASM----- 96
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 97 ------LMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILL-TWQKLAP-----MSVLYQILPSINLNLILTLSILSIMI 164
Cdd:pfam00361 81 llllflLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGyglirRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 165 GGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTM-FTLFMA--------NSTTTTLSLAHTWN 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFsAGLFLCagsviyrrVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 148543103 236 KAPIMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITA 286
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
6-297 |
6.43e-29 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 116.07 E-value: 6.43e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 6 FILILMtvMLGTIIVMISS-HWLLIWIGFEMNMLTI-IPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIIINLTFSGQ 83
Cdd:PRK05777 106 YLLVLF--ALLGMMVMVSAnDLLTLFLGLELLSLPLyALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGS 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 84 WTATKLFNPTAS------------MLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIL----- 146
Cdd:PRK05777 184 LSFAGIAKALADgsgnsllllfglVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLvvafg 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 147 --PSINLNLILTLSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTM----TLLNLIIYIIMTSTMFTLFM 220
Cdd:PRK05777 264 glSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEgysaVLFYLLAYLFMTLGAFGVIS 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 221 ANST----TTTLS-LAHTWNKAPIMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMR 295
Cdd:PRK05777 344 LLRRkggeAESISdFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLR 423
|
..
gi 148543103 296 LM 297
Cdd:PRK05777 424 VI 425
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
6-296 |
6.35e-28 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 113.50 E-value: 6.35e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 6 FILILMTVMLGTIIVMISSHWLLIWIGFEMNMLTI-IPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIIINLTFSGQW 84
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 85 TATKLFNP------------TASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSI--- 149
Cdd:TIGR01770 184 NFEDLLLFlsngmlnislllLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIlfg 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 150 ----NLNLILTLSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTM----TLLNLIIYIIMTSTMFTLFMA 221
Cdd:TIGR01770 264 fseaWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEgikaVLFYIFIYALMSLGAFGVLSL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 222 ------NSTTTTLSLAHTWNKAPIMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMR 295
Cdd:TIGR01770 344 lrsykdEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLR 423
|
.
gi 148543103 296 L 296
Cdd:TIGR01770 424 V 424
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
2-300 |
2.57e-22 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 97.14 E-value: 2.57e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 2 NPTIFILILMTVMLGTIIVMISSHWLLIWIGFEMNMLTIIPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIII----- 76
Cdd:COG0651 105 RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLlygat 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 77 -NLTFSGQWTATKLFNP----TASMLMTMALAMKLGMAPFHFWVPE-----------VTQGIPLSSGLILLtwqklapMS 140
Cdd:COG0651 185 gTLNMADLAARLAELDPglllAAFALLLVGFGIKAALFPLHFWLPDaypaapspvsaLLSGLLTKVGVYAI-------LR 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 141 VLYQILPSINLN----LILTLSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTM- 215
Cdd:COG0651 258 VLTLLFGADPALflgtLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAk 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 216 FTLFMA-------NSTTTTLSLAHTWNKAPIMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALL 288
Cdd:COG0651 338 ALLFLAagaieraTGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLL 417
|
330
....*....|..
gi 148543103 289 NLFFYMRLMYST 300
Cdd:COG0651 418 TLAYFVRIFGRA 429
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
6-295 |
3.56e-16 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 79.32 E-value: 3.56e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 6 FILILMTVMLGTIIVMISSHWLLIWIGFEMnmLTIIPIMMK---KHNPRATEASTKYFLTQSTASMLLMMAIIINLTFSG 82
Cdd:PRK02504 112 FAAILLTATLGGMFLSGATELVMIFISLET--LSIASYLLTgymKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSG 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 83 QWT-----ATKLFNpTASMLMTMAL-------AMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIL---- 146
Cdd:PRK02504 190 GSTqlsaiALALIT-SPSLGLALALvfviagiAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALAIRLLvtaf 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 147 PSIN--LNLILT-LSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNP----TMTLLNLIIYIIMTSTMFT-- 217
Cdd:PRK02504 269 PSFDeqWKLLFTaLAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagyASMVFYLLAYLFMNLGAFAcv 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 218 -LFMANSTTTTLS-LAHTWNKAPIMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMR 295
Cdd:PRK02504 349 iLFSLRTGTDQISdYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISIYYYIR 428
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
6-267 |
4.19e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 76.44 E-value: 4.19e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 6 FILILMtVMLGTIIVMISSHWLLIWIGFEMNMLTIIPIMMKKHNPRAT---------EASTKYFLTQSTASMLLMMAIII 76
Cdd:MTH00198 191 FALVLI-VGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCAL 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 77 NLTFSG-------------QWTATKLFNPTASML-MTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVL 142
Cdd:MTH00198 270 YFGFTGnegmlgtilsatlETTNIELRQGSLGYLfITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILL 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 143 YQILpsINLNLILTLSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLN----LIIYIIMTSTMFTL 218
Cdd:MTH00198 350 TSLV--ITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQAswtyAVTYLVSALASFTV 427
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 219 ------FMANSTTTTLSLAHTWNKAPI-----MTIL----------ILITLLSMGGLPPLSGFMPKWMII 267
Cdd:MTH00198 428 ictleeFGTRTPTSRQRDGSFGNYNLVrrlvdLTILsrgqpyiafsLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
6-298 |
7.05e-13 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 69.20 E-value: 7.05e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 6 FILILMTVMLGTIIVMISSHWLLIWIGFEMN---MLTIIPIMMKKHNPRAteaSTKYFLTQSTASmLLMMAIIINLTFSG 82
Cdd:TIGR01972 108 FYALLLLLEAGVIGVFLALDLFLFYVFWEAMlipMYLLIGVWGGPNRIYA---AMKFFLYTLAGS-LLMLLAILGLYFLG 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 83 QWT------ATKLFNPTASMLMTMAL----AMKLGMAPFHFWVPEV-----TQGIPLSSGLILltwqKLAPMSVLYQILP 147
Cdd:TIGR01972 184 GGTfdllelLNLPLPFGVQTWLFLAFfiafAVKVPLFPLHTWLPDAhveapTAGSVILAGVLL----KMGTYGFLRFNLP 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 148 ------SINLNLILTLSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMT-AVLLYNPTMT---LLNLIIYIIMTSTMFT 217
Cdd:TIGR01972 260 lfpdasLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLlGIFSFNELGIsgaVFQMISHGLITAALFL 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 218 LF-MANSTTTTLSLAH---TWNKAPIMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNsiILPTFMAITALLNLFFY 293
Cdd:TIGR01972 340 LVgVLYERAHTRDIAKyggLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVN--PVVAFLAALGIVLAAAY 417
|
....*
gi 148543103 294 MRLMY 298
Cdd:TIGR01972 418 MLTLY 422
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-299 |
8.38e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 68.97 E-value: 8.38e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 50 PRATEASTKYFLTQSTASMLLMMAIII------NLTFSGqwTATKL-FNPT-----ASMLMTMALAMKLGMAPFHFWVPE 117
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALlygqygTLNMAY--LAVKMsENPTvvakiALALFIAGLAMKSGAVPVHMWLPD 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 118 VTQGIPLSSGLILLTwQKLAPMSVLYQIL-----PSINLN----LILTLSILSIMIGGWGGLNQTQLRKIMAYSSIAHMG 188
Cdd:PRK08376 246 AYPAAPSSISAMLLV-IKQAGLYALARVLfsiygPAINLAtvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIG 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 189 WM------TAVLLYNPTMTLLNLI-----IYIIMTSTMFTLFMANSTTTTLSLAHTWN---------KAPIMTILILITL 248
Cdd:PRK08376 325 YMllglgvGLAALGDPAMASYGEIalaggIYHIVNHALYKALLFLTAGAVIYETGTRNlnelgglarTMPKTTIAFLIGA 404
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 148543103 249 LSMGGLPPLSGFMPKWMIIQEMTKNNSiILPTFMAITALLNLFFYMRLMYS 299
Cdd:PRK08376 405 AAIVGLPPFNGFASKWLIYESSALFNP-ILGVIAMIGSVLTLASFVKVFHT 454
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
93-298 |
2.31e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 67.60 E-value: 2.31e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 93 TASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSI----------NLNLILTLSILSI 162
Cdd:PRK08375 203 TAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVfggdfrfalgLGWLLAVLALLSM 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 163 MIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVL-LYNPTM---TLLNLIIYIIMTSTMF----TLFMANSTTTTLSLAHTW 234
Cdd:PRK08375 283 LVGSLAALGQDDVKRVLAYSTVSQMGYILLGLaLLTPLAlaaGLLHLLHHALMKGALFlaagAIEVTYGTRRLSELSGLG 362
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 148543103 235 NKAPIMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMRLMY 298
Cdd:PRK08375 363 RRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
43-341 |
6.16e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 66.53 E-value: 6.16e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 43 IMMKKHNPRATEASTKYFLTQSTASMLLMMAIII-------------NLTFSGQW---TATKLFNPTASMLMTMALAM-- 104
Cdd:PRK12667 153 VAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFlyatfgtlnmadlSAKIRGLSfplTGGLAGNPPLALGVALALALwa 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 105 ---KLGMAPFHFWVPEVTQGIP-----LSSGLILLTwQKLAPMSVLYQI---------LPSINLNLILTLSILSIMIGGW 167
Cdd:PRK12667 233 ftiKAAIFPNHFWLPDAHPAAPspvsaMLSGLVVNV-GAYAIIRFLYTIfgispslidFRAALSPILIILGAVSAIIGAL 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 168 GGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFT-LFMAN-------STTTTLSLAHTWNKAPI 239
Cdd:PRK12667 312 MMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSlLFLASgvfihaaGTRDIDELAGLGRKMPI 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 240 MTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMRLMYSTTLTMFPSTNNMKMKWQFST 319
Cdd:PRK12667 392 ASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSLFFGKPKSGEEVEHKESPSM 471
|
330 340
....*....|....*....|..
gi 148543103 320 TKRMTLLPTMTVLSTMLLPLTP 341
Cdd:PRK12667 472 SVVILVLALAVLILGILALFLP 493
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
1-296 |
6.52e-12 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 66.18 E-value: 6.52e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 1 MNPTIFILILMTVMLGTIIVMISSHWLLIWIGFEMNMLTIIPI--MMKKhNPRATEASTKYFLTQSTASMLLMMAIIINL 78
Cdd:CHL00049 108 MAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLsgYTKK-DVRSNEATMKYLLMGGASSSILVYGFSWLY 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 79 TFSG----------QWTATKLFNPTAS----MLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQ 144
Cdd:CHL00049 187 GLSGgeielqeivnGLINTQMYNSPGIsialIFITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALATR 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 145 IL----PSIN--LNLILT-LSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGW-MTAVLLYNP----TMTLLNLIIYIIMT 212
Cdd:CHL00049 267 IFdipfYFSSneWHLLLEiLAILSMILGNLIAITQTSMKRMLAYSSIGQIGYvIIGIIVGDSndgyASMITYMLFYIFMN 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 213 STMF---TLFMANSTTTTL-SLAHTWNKAPIMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALL 288
Cdd:CHL00049 347 LGTFaciVLFGLRTGTDNIrDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVI 426
|
....*...
gi 148543103 289 NLFFYMRL 296
Cdd:CHL00049 427 SIYYYLKI 434
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-300 |
9.90e-12 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 65.94 E-value: 9.90e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 48 HNPRATEASTKYFLTQSTASMLLMMAIIINLTFSGQWTATKLFN----PTASMLMTMALAM-------KLGMAPFHFWVP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAaaptILSSPLLTLILLLlllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 117 E-----------------VTQGIPLssglilltwqkLAPMSVLYQILPSInLNLILTLSILSIMIGGWGGLNQTQLRKIM 179
Cdd:COG1009 236 DamegptpvsallhaatmVKAGVYL-----------LARLSPLFALSPVW-LTVVAIIGAITALFAALIALAQTDIKRVL 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 180 AYSSIAHMGWMTAVLlynpTMTLLNLIIYIIMTSTMF--TLFMAnstttTLSLAHT------------WNKAPIMTILIL 245
Cdd:COG1009 304 AYSTVSQLGYMFLAL----GVGAYVAALFHLLTHAFFkaLLFLG-----AGSVIHAtgtrdirkmgglRKKMPITAITFL 374
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 148543103 246 ITLLSMGGLPPLSGFMPKWMIIQEM--TKNNSIILPTFMAITALLNLFFYMRLMYST 300
Cdd:COG1009 375 IGALSLAGIPPFAGFFSKEAILEAAleAGGLGPLLLAVALLGAFLTAFYSFRLFFLV 431
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
5-298 |
1.30e-11 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 65.49 E-value: 1.30e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 5 IFILILMTVMLGtiiVMISSHWLLIWIGFEmnmLTIIP----IMMKKHNPRAtEASTKYFLTQSTASMLLMMAIIINLTF 80
Cdd:COG1008 115 ALLLLLEAGMIG---VFLALDLFLFYVFWE---LMLIPmyflIGIWGGERRI-YAAIKFFLYTLAGSLLMLVAILALYFL 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 81 SGQWT------ATKLFNPTASML----MTMALAMKLGMAPFHFWVPEV-----TQGIPLSSGLILltwqKLAPMSVL--- 142
Cdd:COG1008 188 AGALTfdiaelAAAPLPLTAQLLlflaFFIAFAVKVPMFPFHTWLPDAhveapTAGSVLLAGVLL----KMGGYGLLrfa 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 143 YQILP---SINLNLILTLSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMT-AVLLYNPTM---TLLNLIIYIIMTSTM 215
Cdd:COG1008 264 LPLFPeasAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLlGIFALNPLGlqgAVLQMVSHGLITAAL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 216 FTL-FMANSTTTTLSLAHT---WNKAPIMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNN---SIILPTFMAITALL 288
Cdd:COG1008 344 FLLvGVLYDRTHTRDIADLgglAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNpwlAILAALGLILTAAY 423
|
330
....*....|
gi 148543103 289 NLFFYMRLMY 298
Cdd:COG1008 424 LLWMYQRVFF 433
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-341 |
1.46e-11 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 58.81 E-value: 1.46e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 148543103 291 FFYMRLMYSTTLTMFPSTNNMKMKWQFSTTKRMTLLPTMTVLSTMLLPLTP 341
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLPTLTTLSILLLPLTP 51
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-307 |
1.90e-10 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 61.94 E-value: 1.90e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 2 NPTIFILILMTVMLGTIIVMISSHWLLIWIGFEMNMLTIIpIMMKKHNPRATEASTKYFLTQSTASMLLMMAIIINL--- 78
Cdd:PRK08668 96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYakt 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 79 -TFSGQWTATKLFNPT-------ASMLMTMALAMKLGMAPFHFWVPEVTQGIP------LSSGL-------ILLTWQKLA 137
Cdd:PRK08668 175 gTFDFADISQGLINDTstgfaliVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPqsfsavLSGQLsklgaygFLLVLYVLP 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 138 PMSVLYQILPSINLNL----ILTLSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGW-------MTAVLLYNPTMTLLNLI 206
Cdd:PRK08668 255 GTKLFSEFGTYRGVPLfnyiLAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYilvglglGTSLGFAGGLFHVFNHA 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 207 IYIIMTSTMFTLFMANSTTTTLS----LAHtwnKAPIMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFM 282
Cdd:PRK08668 335 LFKGLFFLIFAAVIYRTGTTKISemggLIE---KMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMA 411
|
330 340
....*....|....*....|....*
gi 148543103 283 AITALLNLFFYMRLMYSTTLTMFPS 307
Cdd:PRK08668 412 FFGSIGSFLYVFRPLAGVFLGQLPS 436
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
92-297 |
6.43e-10 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 60.35 E-value: 6.43e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 92 PTASMLMTMALAMKLGMAPFhFWVPEVTQGIPLSSGLI---LLT----WQKLAPMSVLYQILPSINLNLILTLSILSIMI 164
Cdd:PRK12663 207 TTIALLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALfaaLLTkvgiYALIRVFTLLFPQERELLHPLLATMAAITMVI 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 165 GGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIY-----IIMTSTMFTLFMANSTTTTLSLAHT---WNK 236
Cdd:PRK12663 286 GALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYlvhdmVVKTALFLIAGSLVRLTGYRSLQYLgglYRK 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 148543103 237 APIMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMRLM 297
Cdd:PRK12663 366 EPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRIF 426
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
81-263 |
2.26e-08 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 55.82 E-value: 2.26e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 81 SGQWTATKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGI-PLSSGLILLTWQK-----LAPMSVLYQILPSINLNLI 154
Cdd:PRK12650 197 SDVWAEKPGLTTVVAVLIAVAAFTKSAQFPFHFWLPEAMAAItPVSAFLHAAAVVKagiylLLRFSPVFHDVAVWNWLLI 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 155 LTLSILSIMiGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIImTSTMF--TLFM-------ANSTT 225
Cdd:PRK12650 277 IVGMITALM-GAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTL-AHALFksSLFMligvvdhQAGTR 354
|
170 180 190
....*....|....*....|....*....|....*...
gi 148543103 226 TTLSLAHTWNKAPIMTILILITLLSMGGLPPLSGFMPK 263
Cdd:PRK12650 355 DIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
100-326 |
5.28e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 51.08 E-value: 5.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 100 MALAMKLGMAPFHFWVPEVTQGIPLSSGL----ILLTWQKLAPMSVLYQILPSINLNL---ILTLSILSIMIGGWGGLNQ 172
Cdd:MTH00226 238 LAMAVKIPIFPFHIWLPKAHVEAPVAGSVllagILLKLGGYGLVRLSWPILPLGAQNLapaVIAMGIVGIVYGSFATCRQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 173 TQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYI----IMTSTMFTLFMANSTTTTLSLAHTWN----KAPIMTILI 244
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMlahgIVSSLLFILVTILYDRHHTRLIKYYRglsiTMPIWGTIM 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 245 LITLLSMGGLPPLSGFMPKWMIIQEMTKNNSII---LPTFMAITALLNLFFYMRLMYSTTLTMFPSTNNMKMKwQFSTTK 321
Cdd:MTH00226 398 IVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIgvfVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRR-EFYITA 476
|
....*
gi 148543103 322 RMTLL 326
Cdd:MTH00226 477 SMVFF 481
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
152-342 |
5.99e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 50.89 E-value: 5.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 152 NLILTLSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFT-LFMAN-------S 223
Cdd:PRK12662 280 NVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSaLFMVSgsisyhfG 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 224 TTTTLSLAHTWNKAPIMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMRLMYSTTLT 303
Cdd:PRK12662 360 TTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKIVEALYFE 439
|
170 180 190
....*....|....*....|....*....|....*....
gi 148543103 304 MfPSTNNMKMKWQFSTTKRMTLLPTMTVLSTMLLPLTPM 342
Cdd:PRK12662 440 S-RMVESKANDKAFKTPNAMVLCIWIMAILSIIVGIYPI 477
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
10-288 |
7.49e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 50.80 E-value: 7.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 10 LMTVMLGT-IIVMISSHWLLIWIGFEMNMLTIIPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIII------NLTFSG 82
Cdd:PRK12561 92 LMLVLYSAqIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLAlalsgdTFTFDL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 83 QWTATKLFNPTASML----MTMALAMKLGMAPFHFWVPEV--TQGIPLSSGL--ILLTWQKLAPMSVLYQILPSINLNLI 154
Cdd:PRK12561 172 AELGAKSYPLALELLlyagFLIAFGVKLPIFPLHTWLPDAhgEASAPVSMILagVLLKMGGYALIRFNVQMLPDAHVYFA 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 155 LTLSILSIMIGGWGGLN---QTQLRKIMAYSSIAHMGWmtaVLLYNPTMT-------LLNLIIYIIMTSTMFtlFMANST 224
Cdd:PRK12561 252 PALAILGVVNIIYGALNafaQDNVKRRLAYSSVSHMGF---VLLGIAAFTdlgisgaMLQMISHGLIAAALF--FLTGVT 326
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 225 ---TTTLSLAHTWNKAPIMTI---LILITLLSMGGLPPLSGFMPKWMIIQEMTkNNSIILPTFMAITALL 288
Cdd:PRK12561 327 yerTHTLSIPNMGGLAKVMPKtfaLFTASSMASLALPGMSGFVSELTVFLGIT-SSDVYSSTFRTITILL 395
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
29-302 |
1.59e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 46.56 E-value: 1.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 29 IWIGFEMNMLTIIPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIIINLTFSGQWTATK----LFNPTASMLMTMALAM 104
Cdd:PRK06277 125 LYVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnaLLVNPTSPVIYGGLLL 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 105 KL-------GMAPFHFWVPEVTQGIPLSSGLILLTWQKL---APMSVLYQI------LPSINLnLILTLSILSIMIGGWG 168
Cdd:PRK06277 205 LIfgllygsGLPPFHTIKSDIYAKAKPFGSALLQTFSKFvlvALMLVIFKLfgglsyFPSAQG-VLIALSVLAMVFGVVM 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 169 GLNQTQLRKIMAYSSIAHMGWMTAVLL----YNPTMTLLNLIIYIIMTSTMF----TLFMANSTTTTLSLAHTWNKAPIM 240
Cdd:PRK06277 284 ALLQTDYKRLLAYHAISQGGYVAAGLAlgtpLGIVAGIFHAINHVIYKSALFlgagIVSYRTKTSNLRKLGGLLPVMPVV 363
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 148543103 241 TILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMRLMYSTTL 302
Cdd:PRK06277 364 AFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFYLIYL 425
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
100-191 |
2.74e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 45.81 E-value: 2.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 100 MALAMKLGMAPFHFWVPEVTQGIPLSSGLIL--------------LTWQKLAPMSVLYQilpsinlNLILTLSILSIMIG 165
Cdd:MTH00217 214 LSLAIKIPKIPFHIWLPQAHVEAPVAGSVILagvllklggygfirFSWPLLPEASEYFS-------PLIQTLSLLAIIYG 286
|
90 100
....*....|....*....|....*.
gi 148543103 166 GWGGLNQTQLRKIMAYSSIAHMGWMT 191
Cdd:MTH00217 287 SLTTCRQVDLKRIIAYSSVAHMGLVT 312
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
6-298 |
3.03e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 45.58 E-value: 3.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 6 FILILMTVMlGTIIVMISSHWLLIWIGFEMNMLTIIPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIIINLTFSGQWT 85
Cdd:PRK05846 114 MAALLWLEG-GVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGGKNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYYNAT 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 86 ATKLFNPTASMLMTM------------ALAMKLGMAPFHFWVPEV-----TQGIPLSSGLILltwqKLAP---MSVLYQI 145
Cdd:PRK05846 193 GTFDIADLLNLPLPPgvqywlflaffiAFAVKMPMFPLHTWLPDAhvqapTAGSVLLAGILL----KMGAyglLRFSLPL 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 146 LPSINLN---LILTLSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYII----MTSTMFTL 218
Cdd:PRK05846 269 FPDASHEfapIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMIshglSSAALFLL 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 219 --FMANSTTTTL--SLAHTWNKAPIMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIIlpTFMAITALLNLFFYM 294
Cdd:PRK05846 349 vgVLYDRLHTRDiaDYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVI--AFIATTGLILAAVYS 426
|
....
gi 148543103 295 RLMY 298
Cdd:PRK05846 427 LWLY 430
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
152-268 |
3.50e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 45.34 E-value: 3.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 152 NLILTLSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYI---IMTSTmfTLFMA------N 222
Cdd:PRK12665 274 TLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVahhITVQT--TLFLVvglierQ 351
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 148543103 223 STTTTL----SLAHTwnkAPIMTILILITLLSMGGLPPLSGFMPKWMIIQ 268
Cdd:PRK12665 352 AGSSSLrrlgGLAKA---SPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
100-191 |
3.79e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 45.44 E-value: 3.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 100 MALAMKLGMAPFHFWVPEVTQGIPLSSGLILL-TWQKLAPMSVL---YQILPSINL---NLILTLSILSIMIGGWGGLNQ 172
Cdd:MTH00204 217 LSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAgILLKLGGYGFLrfsWPLFPAASEyfaPLIVMLSVIAVIYGSLTTCRQ 296
|
90
....*....|....*....
gi 148543103 173 TQLRKIMAYSSIAHMGWMT 191
Cdd:MTH00204 297 VDFKRLIAYSSVAHMGLVP 315
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
85-272 |
3.87e-05 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 45.20 E-value: 3.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 85 TATKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTW-QKLAPMSVLYQILPSINLNL-----ILTLS 158
Cdd:PRK08042 173 MQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLG 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 159 ILSIMIGGWGGLNQTQLRKIMAYSSIAHMG--------WMTAVLLYNPTMTLLNLI--IYIIMTSTMF--TLFMANSTT- 225
Cdd:PRK08042 253 MITAFVGGLYALMEHNIQRLLAYHTLENIGiillglgaGVTGIALEQPALIALGLVggLYHLLNHSLFksVLFLGAGSVw 332
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 148543103 226 ------TTLSLAHTWNKAPIMTILILITLLSMGGLPPLSGFMPKWMIIQEMTK 272
Cdd:PRK08042 333 frtghrDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
52-312 |
5.69e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 44.68 E-value: 5.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 52 ATEASTKYFLTQSTASMLLMMAIIINLTFSGQWTATKLFNPTAS----------MLMTMALAMKLGMAPFHFWVPEVTQG 121
Cdd:MTH00020 160 ANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVVSapssditlicLFLFIGAVGKSAQLGLHTWLPDAMEG 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 122 IPLSSGLILLTWQKLA------PMSVLYQILPSInLNLILTLSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMT-AVL 194
Cdd:MTH00020 240 PTPVSALIHAATMVTAgvflliRSSPLFEQAPLA-LIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVvACG 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 195 LYNPTMTLLNLIIYIIMTSTMFtlFMANSTTTTLSLAHTWNKA-------PIMTILILITLLSMGGLPPLSGFMPKWMII 267
Cdd:MTH00020 319 LSHYSISLFHLMNHAFFKALLF--LSAGSVIHALSDEQDMRKMgglisflPLTYIFFLIGSLSLMGFPYLTGFYSKDLIL 396
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 148543103 268 QEMTKNNSIILPTFMAI-TALLNLFFYMRLMYsttLTMFPSTNNMK 312
Cdd:MTH00020 397 ELAFGQYYLIFAYWLGCfSALLTAFYSIRLIY---LTFLSNTNLKK 439
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
60-291 |
7.18e-05 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 44.52 E-value: 7.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 60 FLTQSTASMLLMMAIIINLTFSG--------QWTATKLFNPTASMLMTMAL----AMKLGMAPFHFWVPEVTQG------ 121
Cdd:PRK07390 177 FLTKRVGDLLLLMGVVALSPLAGtlnfsdlaAWAATANLDPLTATLLGLALiagpTGKCAQFPLHLWLDEAMEGpnpasi 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 122 ----IPLSSGLILLTwqKLAPmsvLYQILPsINLNLILTLSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWM-TAVLLY 196
Cdd:PRK07390 257 lrnsVVVATGAWVLI--KLQP---VLALSP-VALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVfIAVGLQ 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 197 NPTMTLLNLIIYIImtsTMFTLFM------ANSTTTTLS-LAHTWNKAPIMTILILITLLSMGGLPPLSGFmpkWMIIQe 269
Cdd:PRK07390 331 QPDIALLLLLTHAI---AKALLFMsvgsiiLTTITQDLTeLGGLWSRMPATTLAFLVGSAGLVALLPLGGF---WALLR- 403
|
250 260
....*....|....*....|..
gi 148543103 270 MTKNNSIILPTFMAITALLNLF 291
Cdd:PRK07390 404 LADGLWAVSPWLVGVLLLVNAL 425
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
5-268 |
8.52e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 44.34 E-value: 8.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 5 IFIL-ILMTVMLGTIIVMisshwLLIWIgfEMNMLTIIPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIIINLTFSGQ 83
Cdd:PRK08667 119 LFILsMLGVVASANTFSF-----LFFWE--IMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 84 WTATKLFNPTAS-----MLMTMALAMKLGMAPFHFWVPEVTQGIP-----LSSGLILLTwQKLAPMSVLYQIL-PSINLN 152
Cdd:PRK08667 192 FELSPLGASAGIlslvfLLLFLGFGIKAGIIPFHKWLPYAHPASPsnvsaLMSGVMLKV-AVYGLVRFLMDVLsPELWWG 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 153 -LILTLSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGW-MTAVLLY-------NPTMTLLNL-------IIYIIMTSTMF 216
Cdd:PRK08667 271 vLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIiLMGIGLYvifgvygLDTLALLALggalfhsLNHALFKSLLF 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 148543103 217 ----TLFMANSTTTTLSLAHTWNKAPIMTILILITLLSMGGLPPLSGFMPKWMIIQ 268
Cdd:PRK08667 351 ltagSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYE 406
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
2-190 |
1.62e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 43.20 E-value: 1.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 2 NPTIFILILMTVMLGTIIVMISSHWLLIWIGFEMNML---TIIPIMMKKHNpraTEASTKYFLTQSTASMLLMMAIIINL 78
Cdd:PRK08676 100 NLKVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVfsaMLIAILSAREN---IDAALKYIFIASTAMIFAFIGLIFLF 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 79 TFSGQWTATKLFNPT----------------ASMLMTMALAMKLGMAPFHFWVPEVTQGIP-LSSGLILLTWQKLAPMSV 141
Cdd:PRK08676 177 SLTRQALGTGTLNWTelaahasllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAYAKAPsVVSALLSGTVLNIGIYGI 256
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 148543103 142 L--YQIL-----PSINLNLILTLSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWM 190
Cdd:PRK08676 257 LrlSALLrqsgaAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLM 312
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
95-296 |
1.74e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 43.40 E-value: 1.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 95 SMLMTMALAMKLGMAPFHFWVPEVTQGIPLS-SGLI--LLT----WQKLAPMSVLYQILPSINLNLILTLSILSIMIGGW 167
Cdd:PRK07691 212 AILFLFVFATKAGLFPLYFWLPGSYYAPPIAiAALFgaLLTkvgvYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVI 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 168 GGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFT-LFMANSTTTTLSLAHTWNKA-------PI 239
Cdd:PRK07691 292 GAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAaLFLLIGIMIKITGTTDLKKMgglikryPV 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 148543103 240 MTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMRL 296
Cdd:PRK07691 372 LGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-299 |
3.07e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 42.50 E-value: 3.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 6 FILILMTVMLGTIIVMISSHWLLIWIGFEMNMLTIIPIMMKKHNPRATEASTKYF-LTQSTASMLLMMAIII--NLTFSG 82
Cdd:PRK06589 118 FLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLkILMISALLLFLPAVILiyTKTGNL 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 83 QWTATKLFNPTAS---MLMTMALAMKLGMAPFHFWVPE-VTQGIPLSSGLILLTWQKLAPMSVLYQILPSINL------- 151
Cdd:PRK06589 198 DFVSGGLFSKNQSiilLLMFIYGIAKTAIFPVHSWLPAaMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLsylqrif 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 152 ---NLILTLSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTS-TMFTLFMANSTTTT 227
Cdd:PRK06589 278 aefNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSfAKICLFYSMGSIYS 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 228 LS-------LAHTWNKAPIMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAI----TALLNLFFYMRL 296
Cdd:PRK06589 358 LKkedqvdkLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLvviaSSILSALYLLKI 437
|
...
gi 148543103 297 MYS 299
Cdd:PRK06589 438 LSS 440
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
15-288 |
3.09e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 42.47 E-value: 3.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 15 LGTIIVMISSHWLLIWIGFE-MNMLTIIPIMMKKHNPRATEAstkyFLTQSTASMLLMMA-IIINLTFSGQWTATKLFNP 92
Cdd:PRK06459 83 LGMAIVLTSDNYLLFLAGWEiMTIPSYVAIALTKKNKRPAFV----FMAFGELSTVLILAgFAWAFIISGTTNFSYLPSP 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 93 TASMLMTMALAMKLGMAPFHF--WVPEVTQGIP------LSSGLILLTWQKLAPMSVLYQILPSINLNL-ILTLSILSIM 163
Cdd:PRK06459 159 VPLILASFGFIIKMGMMPFLVseWLPIAHGNAPsnfsaiLSATMTLMGVYGILKMTILTQTIPIGYFGLtILAIGAFSIL 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 164 IGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSLA---------HTW 234
Cdd:PRK06459 239 FGALYAYVSENVKGLLAFSTIENNGAILVALGLYMVTKQLITSIEHFSLITVILYSFAHSVAKTGLFLssglqekqsITY 318
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 148543103 235 NKAP---IMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKnNSIILPTFMAITALL 288
Cdd:PRK06459 319 SKKIrnrWIELGLTLLASSLSGLLPNIGGVASWLLLESLFM-FAYVLHNVISILFIV 374
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
6-263 |
7.01e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 41.44 E-value: 7.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 6 FILILMTVMLGTIIvmiSSHWLLIWIGFEMNMLT-IIPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIIINLTFSGQW 84
Cdd:PRK12647 100 YILLFMASMLGLVL---SDNLITLFVFWELTSITsFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTY 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 85 TATKLFNP----TASMLMTMALAMKLGMA-------PFHFWVPEVTQG-IPLSSGLILLTWQKlAPMSVLYQILPSIN-- 150
Cdd:PRK12647 177 SLSELLASgdviREHPLYLAILLLVLGGAftksaqfPFHFWLPNAMEApTPVSAYLHSATMVK-AGIYLLARLNPVLGgt 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 151 ---LNLILTLSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTStMF--TLFMA---- 221
Cdd:PRK12647 256 plwQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHS-LYkgALFMVagii 334
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 148543103 222 -NSTTT--TLSLAHTWNKAPIMTILILITLLSMGGLPPLSGFMPK 263
Cdd:PRK12647 335 dHETGTrdITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAK 379
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
97-317 |
7.03e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 40.62 E-value: 7.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 97 LMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTLSILSIMiggwGGLNQTQLR 176
Cdd:MTH00091 62 FQFLILMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFFSKNFFFLLLFGLLICFF----QMFLLKSYK 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 177 KIMAYSSIAHMGWMTAVLLYNPTMTllnLIIYIIMTSTMFTLFMansttttlslahTWNKAPIMTILILITLLSMGGLPP 256
Cdd:MTH00091 138 NLLILSSTESFNWLILSFFFSFFNV---FFLFFYYFLLMLFLIP------------KFNNVNKLNFVSWETLLVFMNLPF 202
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 148543103 257 LSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMRLMYSTTLTMFPSTNNMKMKWQF 317
Cdd:MTH00091 203 SVTFFVKIFSLSEILKVLGFFLLFLLFLMFLSVLSLSFWLVNLSTKLFLMLFKYNKGFFFF 263
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-314 |
1.41e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 40.49 E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 1 MNPTIFILILMTVMLGTIIVMISSHWLLIWIGFEMNML-TIIPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIII--- 76
Cdd:MTH00014 87 KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIpTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLify 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 77 -----NLTFSGQWTATKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLIL------LTWQKLAPMSVLYQI 145
Cdd:MTH00014 167 tnnslSMLMSSMEPPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILagillkLGGYGLLRMSSLFMH 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 146 LPSINLNLILTLSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTM----TLLNLIIYIIMTSTMFTLF-M 220
Cdd:MTH00014 247 INKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWgwqgALAMMIAHGLCSSALFALAnM 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 221 ANSTTTTLSLAHT---WNKAPIMTILILITLLSMGGLPPLSGFMPKWMI---IQEMTKNNSIILPTFMAITALLNLFFYM 294
Cdd:MTH00014 327 TYETTHTRSLFLTkglLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLltsILSSSLSTAILLAITSFLAAAYSLFLYT 406
|
330 340
....*....|....*....|
gi 148543103 295 RLMYSTTLTMFPSTNNMKMK 314
Cdd:MTH00014 407 STQHGSPPSFMNPLNLFTPR 426
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
5-301 |
2.61e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 39.74 E-value: 2.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 5 IFILILMTVMLGtiiVMISSHWLLIWIGFEMNMLTIIPIMMKKHNPRATE-ASTKYFLTQSTASMLLMMAIIINLTFSGQ 83
Cdd:PRK12646 114 FYLTLFMFSMIG---IVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQfGAIQSFMITVFGGLALLVGFIMLYIMTGT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 84 WTATKLFNPTAS-----MLMTMALAMKLG------MAPFHFWVPEVTQG-IPLSSGLILLTWQKlAPMSVLYQILPSINL 151
Cdd:PRK12646 191 NNITEILGQADHiknhgLFIPMIFMFLLGaftksaQFPFHIWLPRAMAApTPVSAYLHSATMVK-AGIFLLFRFTPLLGL 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 152 N-----LILTLSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAV------LLYNPTMTLLNLIIYII-------MTS 213
Cdd:PRK12646 270 SnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMvgigggYAQHQQDAIASIYVFVLfaalfhlMNH 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 214 TMF--TLFMA-------NSTTTTLSLAHTWNKAPIMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSI-------- 276
Cdd:PRK12646 350 AIFkcALFMGvgiidheAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLsqfslism 429
|
330 340
....*....|....*....|....*
gi 148543103 277 ILPTFMAITALLNLFFYMRLMYSTT 301
Cdd:PRK12646 430 IIIVFIGVIASIFTFTYALYMVKEV 454
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
3-266 |
2.88e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 39.30 E-value: 2.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 3 PTIFILILMTVMLGTIIVMISSHWLLIWIGFEMNMLTIIPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIII------ 76
Cdd:PRK02546 114 PKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALAmafygd 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 77 NLTFSGQWTATKLFNPTASMLM----TMALAMKLGMAPFHFWVP----EVTQGIPLSSGLILLTWQKLAPMSVLYQILPS 148
Cdd:PRK02546 194 TPTFDMTALAAKDFGLGFQLLCyaglLIAYGVKLPIVPLHTWLPdahgEATAPVHMLLAGILLKMGGYALLRMNAGMLPD 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 149 INLN---LILTLSILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWmtaVLLYNPTMT-------LLNLIIYIIMTSTMFtl 218
Cdd:PRK02546 274 AHAQfapLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGF---VLIGIGSFTdlgtsgaMLQMISHGLIGASLF-- 348
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 148543103 219 FMANST---TTTLSLAHTWNKAPIMTILI-LITLLSMG--GLPPLSGFMPKWMI 266
Cdd:PRK02546 349 FLVGATydrTHTLMLDEMGGVGQKMRKMFaMWTACSLAslALPGMSGFVAELMV 402
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
60-267 |
4.40e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 38.78 E-value: 4.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 60 FLTQSTASMLLMMAIII-------NLTFSGQWTAtklfNPTASMLMTMALAMKLGMAPFHFWVPEV-TQGIPLSSGLILL 131
Cdd:PRK07234 149 YLFYSNVAMLFYLIGAVlvyqangTFAFSGLATA----DPEAFALIALGLLVKGGIFVSGLWLPLThSEAEPPVSALLSG 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148543103 132 TWQKLAPMSVLYQILPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWmtavLLYNPTMTLLNLIIYII 210
Cdd:PRK07234 225 VVVKAGVFPLVRCALDVPGLDLIVRIfGVGTALLGVLFALLEKDLKRMLAFSTISQLGF----ILAAPLVGGLYALAHGL 300
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 148543103 211 MTSTMFTLFMANSTTTTLSLAHTwnKAPIMT-ILILITLLSMGGLPPLSGFMPKWMII 267
Cdd:PRK07234 301 VKSTLFLCAGALPSRNFTELISQ--MLGIGKwIPLTMASFSIAGFPLLAGFVSKVLTL 356
|
|
| |
