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Conserved domains on  [gi|164421116|ref|YP_001648411|]
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ATP synthase F0 subunit 6 (mitochondrion) [Cinachyrella kuekenthali]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009612)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 1-241 2.41e-126

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 177228  Cd Length: 244  Bit Score: 357.78  E-value: 2.41e-126
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116   1 MYFDQFNVVKLITIQVFLGDWSVTFTNSSMMMVLAVTIFWLLLEGNRLIPNRWQFIIEFLYINIHSVVQDNLGKVGQKFF 80
Cdd:MTH00175   4 AYFDQFNIIRLITIQAFLGDWLVTFTNSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYF 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  81 PFVLCLFIFIAMLNILGLFPYVFVPTAQIVITLGISLSIIMAVTLLGFFNFKLNFLSILMPGGVPLVLAPFLVVIETASY 160
Cdd:MTH00175  84 PFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSY 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 161 LIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGMIILSFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIYLGDTIAL 240
Cdd:MTH00175 164 LIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDTIAL 243


                 .
gi 164421116 241 H 241
Cdd:MTH00175 244 H 244
 
Name Accession Description Interval E-value
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 1-241 2.41e-126

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 357.78  E-value: 2.41e-126
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116   1 MYFDQFNVVKLITIQVFLGDWSVTFTNSSMMMVLAVTIFWLLLEGNRLIPNRWQFIIEFLYINIHSVVQDNLGKVGQKFF 80
Cdd:MTH00175   4 AYFDQFNIIRLITIQAFLGDWLVTFTNSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYF 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  81 PFVLCLFIFIAMLNILGLFPYVFVPTAQIVITLGISLSIIMAVTLLGFFNFKLNFLSILMPGGVPLVLAPFLVVIETASY 160
Cdd:MTH00175  84 PFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSY 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 161 LIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGMIILSFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIYLGDTIAL 240
Cdd:MTH00175 164 LIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDTIAL 243


                 .
gi 164421116 241 H 241
Cdd:MTH00175 244 H 244
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 21-238 3.61e-48

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 158.52  E-value: 3.61e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116   21 WSVTFTNSSMMMVLAVTIFWLLLEGNR-LIPNRWQFIIEFLYINIHSVVQDNLGKVGQKFFPFVLCLFIFIAMLNILGLF 99
Cdd:TIGR01131  11 TLFSLTLLSLILLLSLLIFLISSSLSRwLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGLI 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  100 PYVFVPTAQIVITLGISLSIIMAVTLLGFFNFKLNFLSILMPGGVPLVLAPFLVVIETASYLIRAISLGVRLAANISAGH 179
Cdd:TIGR01131  91 PYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGH 170

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 164421116  180 LLFAILSGFAFNMLSNGMIILSFLpmsIMIFITLLEIMVAVIQAYVFCLLTTIYLGDTI 238
Cdd:TIGR01131 171 LLLTLLSGLLFSLMSSAIFALLLL---ILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 76-235 8.29e-40

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 134.45  E-value: 8.29e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  76 GQKFFPFVLCLFIFIAMLNILGLFPYVFVPTAQIVITLGISLSIIMAVTLLGFFNFKLNFLSILMPGGVPLVLAPFLVVI 155
Cdd:cd00310    1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 156 ETASYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSngmiILSFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIYLG 235
Cdd:cd00310   81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLS----SVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 31-239 1.40e-37

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 130.58  E-value: 1.40e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  31 MMVLAVTIFWLLLEGNRLIPNRWQFIIEFLYINIHSVVQDNLGKVGQKFFPFVLCLFIFIAMLNILGLFPYVFVPTAQIV 110
Cdd:COG0356    9 AMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADIN 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 111 ITLGISLSIIMAVTLLGFFNFKL-NFLSILMPGGVPLvLAPFLVVIETASYLIRAISLGVRLAANISAGHLLFAILSGFA 189
Cdd:COG0356   89 VTLALALIVFVLVHYYGIKKKGLgGYLKHLFFPPFPW-LAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLA 167

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 164421116 190 FnmlsngMIILSFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIYLGDTIA 239
Cdd:COG0356  168 P------FLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISLAVE 211
ATP-synt_A pfam00119
ATP synthase A chain;
30-235 6.55e-37

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 129.15  E-value: 6.55e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116   30 MMMVLAVTIFWLLLEGNR----LIPNRWQFIIEFLYINIHSVVQDNLG-KVGQKFFPFVLCLFIFIAMLNILGLF---PY 101
Cdd:pfam00119   3 MSLIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGkKKGRKFFPLLLTLFFFILVSNLLGLIpksPG 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  102 VFVPTAQIVITLGISLSIIMAVTLLGFFN--FKLNFLSILMPGgVPLVLAPFLVVIETASYLIRAISLGVRLAANISAGH 179
Cdd:pfam00119  83 GFTVTADINVTLALALIVFLLVHYYGIKKhgLGGYFKKLFVPP-VPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGH 161

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 164421116  180 LLFAILSGFAFNMLSNGmIILSFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIYLG 235
Cdd:pfam00119 162 LLLLLLAGLIFALLSAG-FLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
 
Name Accession Description Interval E-value
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 1-241 2.41e-126

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 357.78  E-value: 2.41e-126
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116   1 MYFDQFNVVKLITIQVFLGDWSVTFTNSSMMMVLAVTIFWLLLEGNRLIPNRWQFIIEFLYINIHSVVQDNLGKVGQKFF 80
Cdd:MTH00175   4 AYFDQFNIIRLITIQAFLGDWLVTFTNSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYF 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  81 PFVLCLFIFIAMLNILGLFPYVFVPTAQIVITLGISLSIIMAVTLLGFFNFKLNFLSILMPGGVPLVLAPFLVVIETASY 160
Cdd:MTH00175  84 PFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSY 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 161 LIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGMIILSFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIYLGDTIAL 240
Cdd:MTH00175 164 LIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDTIAL 243


                 .
gi 164421116 241 H 241
Cdd:MTH00175 244 H 244
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 2-241 2.51e-86

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 255.74  E-value: 2.51e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116   2 YFDQFNVVKLITIqvflgdwsvtfTNSSMMMVLAVTIFWLLLEGNRLIPNRWQFIIEFLYINIHSVVQDNLGKVGQKFFP 81
Cdd:MTH00172   5 YFDQFNIVWLIGL-----------TNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFP 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  82 FVLCLFIFIAMLNILGLFPYVFVPTAQIVITLGISLSIIMAVTLLGFFNFKLNFLSILMPGGVPLVLAPFLVVIETASYL 161
Cdd:MTH00172  74 FIISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYI 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 162 IRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGMiILSFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIYLGDTIALH 241
Cdd:MTH00172 154 SRAISLGVRLAANLSAGHLLFAILAGFGFNMLCASG-FLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYLADTIVLH 232
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 2-241 1.06e-54

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 175.90  E-value: 1.06e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116   2 YFDQFNVVKLITIQVFLGDWSVT-----FTNSSMMMVLAVTIFWLLLE---GNRLIPNRWQFIIEFLYINIHSVVQDNLG 73
Cdd:MTH00174   5 YFDQFNIIPIFSIWVYFLSFWINgeffcFTNTFFMMSFAVFLFYTIGAkgnNNTLVPNRILVGLELIYSHFYTVLKDNLG 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  74 KVGQKFFPFVLCLFIFIAMLNILGLFPYVFVPTAQIVITLGISLSIIMAVTLLGFFNFKLNFLSILMPGGVPLVLAPFLV 153
Cdd:MTH00174  85 NKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLT 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 154 VIETASYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGMIILSFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIY 233
Cdd:MTH00174 165 IIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIGSFVPFAILIFVTILEMAVAIIQAYVFTLLTIVY 244


                 ....*...
gi 164421116 234 LGDTIALH 241
Cdd:MTH00174 245 LRDTVELH 252
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 21-238 3.61e-48

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 158.52  E-value: 3.61e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116   21 WSVTFTNSSMMMVLAVTIFWLLLEGNR-LIPNRWQFIIEFLYINIHSVVQDNLGKVGQKFFPFVLCLFIFIAMLNILGLF 99
Cdd:TIGR01131  11 TLFSLTLLSLILLLSLLIFLISSSLSRwLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGLI 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  100 PYVFVPTAQIVITLGISLSIIMAVTLLGFFNFKLNFLSILMPGGVPLVLAPFLVVIETASYLIRAISLGVRLAANISAGH 179
Cdd:TIGR01131  91 PYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGH 170

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 164421116  180 LLFAILSGFAFNMLSNGMIILSFLpmsIMIFITLLEIMVAVIQAYVFCLLTTIYLGDTI 238
Cdd:TIGR01131 171 LLLTLLSGLLFSLMSSAIFALLLL---ILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 76-235 8.29e-40

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 134.45  E-value: 8.29e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  76 GQKFFPFVLCLFIFIAMLNILGLFPYVFVPTAQIVITLGISLSIIMAVTLLGFFNFKLNFLSILMPGGVPLVLAPFLVVI 155
Cdd:cd00310    1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 156 ETASYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSngmiILSFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIYLG 235
Cdd:cd00310   81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLS----SVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 2-234 3.59e-39

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 135.34  E-value: 3.59e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116   2 YFDQFNVVKLITIQVflgdwsvtftnssMMMVLAVTIFWLLLEGNRLIPNRWQFIIEFLYINIHSVVQDNLGKVGQKFFP 81
Cdd:MTH00120   5 FFDQFSSPELLGIPL-------------ILLAMLIPALLIPSPKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWAL 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  82 FVLCLFIFIAMLNILGLFPYVFVPTAQIVITLGISLSIIMAVTLLGFFNFKLNFLSILMPGGVPLVLAPFLVVIETASYL 161
Cdd:MTH00120  72 ILTSLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLL 151

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 164421116 162 IRAISLGVRLAANISAGHLLFAILSGFAFNMLsNGMIILSFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIYL 234
Cdd:MTH00120 152 IRPLALGVRLTANLTAGHLLIQLISTATLNLL-PTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 21-237 7.41e-39

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 134.14  E-value: 7.41e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  21 WSVTFtnssMMMVLAVTIFWLllegnrlIPNRWQFIIEFLYINIHSVVQDNLGKVGQKFFPFVLCLFIFIAMLNILGLFP 100
Cdd:MTH00157  21 WLSTF----LGLLFIPSSFWL-------IPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILFNNFLGLFP 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 101 YVFVPTAQIVITLGISLSIIMAVTLLGFFNFKLNFLSILMPGGVPLVLAPFLVVIETASYLIRAISLGVRLAANISAGHL 180
Cdd:MTH00157  90 YIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHL 169

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 164421116 181 LFAILSGFAFNMLSNGMIILsflpMSIMIFITLLEIMVAVIQAYVFCLLTTIYLGDT 237
Cdd:MTH00157 170 LLTLLGNTGPSLSSMILSIL----ILIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 31-239 1.40e-37

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 130.58  E-value: 1.40e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  31 MMVLAVTIFWLLLEGNRLIPNRWQFIIEFLYINIHSVVQDNLGKVGQKFFPFVLCLFIFIAMLNILGLFPYVFVPTAQIV 110
Cdd:COG0356    9 AMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADIN 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 111 ITLGISLSIIMAVTLLGFFNFKL-NFLSILMPGGVPLvLAPFLVVIETASYLIRAISLGVRLAANISAGHLLFAILSGFA 189
Cdd:COG0356   89 VTLALALIVFVLVHYYGIKKKGLgGYLKHLFFPPFPW-LAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLA 167

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 164421116 190 FnmlsngMIILSFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIYLGDTIA 239
Cdd:COG0356  168 P------FLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISLAVE 211
ATP-synt_A pfam00119
ATP synthase A chain;
30-235 6.55e-37

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 129.15  E-value: 6.55e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116   30 MMMVLAVTIFWLLLEGNR----LIPNRWQFIIEFLYINIHSVVQDNLG-KVGQKFFPFVLCLFIFIAMLNILGLF---PY 101
Cdd:pfam00119   3 MSLIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGkKKGRKFFPLLLTLFFFILVSNLLGLIpksPG 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  102 VFVPTAQIVITLGISLSIIMAVTLLGFFN--FKLNFLSILMPGgVPLVLAPFLVVIETASYLIRAISLGVRLAANISAGH 179
Cdd:pfam00119  83 GFTVTADINVTLALALIVFLLVHYYGIKKhgLGGYFKKLFVPP-VPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGH 161

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 164421116  180 LLFAILSGFAFNMLSNGmIILSFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIYLG 235
Cdd:pfam00119 162 LLLLLLAGLIFALLSAG-FLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 32-234 3.37e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 122.36  E-value: 3.37e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  32 MVLAVTIFWLLL--EGNRLIPNRWQFIIEFLYINIHSVVQDNLGKVGQKFFPFVLCLFIFIAMLNILGLFPYVFVPTAQI 109
Cdd:MTH00179  20 LALALLLPWLLFpsLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFLLTLNLLGLLPYTFTPTTQL 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 110 VITLGISLSIIMAVTLLGFFNFKLNFLSILMPGGVPLVLAPFLVVIETASYLIRAISLGVRLAANISAGHLLFAILSGFA 189
Cdd:MTH00179 100 SLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVRLTANITAGHLLMHLISSAV 179

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 164421116 190 FNmLSNGMIILSFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIYL 234
Cdd:MTH00179 180 FV-LMNFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 31-234 3.90e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 122.29  E-value: 3.90e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  31 MMVLAVTIFWLLLE-------GNRLIPNRWQFIIEFlyinIHSVVQDnLGKVGQKFFPFVLCLFIFIAMLNILGLFPYVF 103
Cdd:MTH00132  19 LIALALTLPWILFPtptsrwlNNRLLTLQGWFINRF----TQQLLLP-LNVGGHKWALLLTSLMLFLITLNMLGLLPYTF 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 104 VPTAQIVITLGISLSIIMAVTLLGFFNFKLNFLSILMPGGVPLVLAPFLVVIETASYLIRAISLGVRLAANISAGHLLFA 183
Cdd:MTH00132  94 TPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQ 173

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 164421116 184 ILSGFAFNMLSNgMIILSFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIYL 234
Cdd:MTH00132 174 LIATAAFVLLPL-MPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 41-236 2.10e-33

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 120.44  E-value: 2.10e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  41 LLLEGNRLIPNRWQFIIEFLYINIHSVVQDNLGKVGQKFFPFVLCLFIFIAMLNILGLFPYVFVPTAQIVITLGISLSII 120
Cdd:MTH00101  30 LFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLW 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 121 MAVTLLGFFNFKLNFLSILMPGGVPLVLAPFLVVIETASYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGMiIL 200
Cdd:MTH00101 110 AGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMSIST-TT 188

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 164421116 201 SFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIYLGD 236
Cdd:MTH00101 189 ALITFIILILLTILEFAVALIQAYVFTLLVSLYLHD 224
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 31-234 4.26e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 119.69  E-value: 4.26e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  31 MMVLAVTIFWLLLEG--NRLIPNRWQFIIEFLYINIHSVVQDNLGKVGQKFFPFVLCLFIFIAMLNILGLFPYVFVPTAQ 108
Cdd:MTH00073  19 LIMLAMLLPWLLFPTptNKWLNNRLSTLQIWFLQNFTKQLMLPLNTPGHKWALILTSLMVFLITMNLLGLLPYTFTPTTQ 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 109 IVITLGISLSIIMAVTLLGFFNFKLNFLSILMPGGVPLVLAPFLVVIETASYLIRAISLGVRLAANISAGHLLFAILSGF 188
Cdd:MTH00073  99 LSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGVRLTANLTAGHLLIQLISTA 178

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 164421116 189 AFNMLSNgMIILSFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIYL 234
Cdd:MTH00073 179 TLVLLPL-MPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYL 223
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 12-241 5.40e-33

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 119.13  E-value: 5.40e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  12 ITIQVFLGDWSVTFTNSSMMMVLAVTIFWLLLEGNR----LIPNRWQFIIEFLYINIHSVVQDNLGKVGQKFFPFVLCLF 87
Cdd:PRK05815   1 IEHHLIIGFGGFNFDSLLLSVLLGVLILLLFALVATrklsGVPGGLQNFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  88 IFIAMLNILGLFP-YVFVPTAQIVITLGISLSIIMAVTLLGFFNFKL-NFLSILMPGGVplvlaPFLVVIETASYLIRAI 165
Cdd:PRK05815  81 LFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGIKKKGLgGYLKEFYLQPH-----PLLLPIEIISEFSRPI 155

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 164421116 166 SLGVRLAANISAGHLLFAIlsgfaFNMLSNGMIILSFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIYLGDTIALH 241
Cdd:PRK05815 156 SLSLRLFGNMLAGELILAL-----IALLGGAGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYISMAVEEE 226
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-237 1.47e-30

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 113.04  E-value: 1.47e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116   1 MYFDQFNvvklitiQVFLGDWSVTFTNSSMMMVLAVTIFWLllegnrlIPNRWQFIIEFLYINIHSVVQDNLGKVGQKFF 80
Cdd:MTH00173   7 SSFDDHN-------SSFSSLSFLMWLLSLMSLFFFSSSVWV-------SSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFS 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  81 PFVLCLFIFIAMLNILGLFPYVFVPTAQIVITLGISLSIIMAVTLLGFFNFKLNFLSILMPGGVPLVLAPFLVVIETASY 160
Cdd:MTH00173  73 LLLSSLFLFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSI 152

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 164421116 161 LIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGMIILSFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIYLGDT 237
Cdd:MTH00173 153 LIRPLTLTVRLLANISAGHIVLTLIGNYLSSSLFSSSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDEH 229
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 28-236 3.75e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 109.44  E-value: 3.75e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  28 SSMMMVLAVTIFWLLLEGNRLIPNRWQFIIEFLYINIHSVVQDNLGKVGQKFFPFVLCLFIFIAMLNILGLFPYVFVPTA 107
Cdd:MTH00005  22 STAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALFTMIILMNLSGLLPYVFSTSS 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 108 QIVITLGISLSIIMAVTLLGFFNFKLNFLSILMPGGVPLVLAPFLVVIETASYLIRAISLGVRLAANISAGHLLFAILSG 187
Cdd:MTH00005 102 HLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFRLAANMSAGHIVLSLIGI 181

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 164421116 188 FAFNMLSNGmIILSFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIYLGD 236
Cdd:MTH00005 182 YAASALFSS-ISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 32-234 5.57e-28

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 106.21  E-value: 5.57e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  32 MVLAVTIFWLLLEGNRLiPNRWQFIIEFLYINIHSVVQDNLGKVGQKFFPFVLCLFIFIAMLNILGLFPYVFVPTAQIVI 111
Cdd:MTH00035  26 SVIALSWLFFINPTNWL-PSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVFILILSINVLGLFPYAFTSTSHISL 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 112 TLGISLSIIMAVTLLGFFNFKLNFLSILMPGGVPLVLAPFLVVIETASYLIRAISLGVRLAANISAGHLLFAILSGFAFN 191
Cdd:MTH00035 105 TYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLRLAANLTAGHLLIFLLSTAIWE 184

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 164421116 192 MLSNGMIilSFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIYL 234
Cdd:MTH00035 185 LSNSPLI--SIITLIIFFLLFILEIGVACIQAYVFTALVHFYL 225
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 79-236 6.89e-28

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 105.89  E-value: 6.89e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  79 FFPFVLCLFIFIAMLNILGLFPYVFVPTAQIVITLGISLSIIMAVTLLGFFNFKLNFLSILMPGGVPLVLAPFLVVIETA 158
Cdd:MTH00176  71 SASIIISLFILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELV 150

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 164421116 159 SYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGMIILSFLPMSiMIFITLLEIMVAVIQAYVFCLLTTIYLGD 236
Cdd:MTH00176 151 SLLIRPLTLAVRLAANLSAGHLLLGLLGAAMWGLLPVSPLIGFLLLIV-QILYFMFEIAVCMIQAYVFTLLLSLYLDE 227
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 1-241 5.73e-18

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 81.33  E-value: 5.73e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116   1 MYFDQFNVVKLITIQVflGDWSVTFTNSSMMMVLAVTIFWLLLEG---------NRLIP----NRWQFIIEFLYINihsV 67
Cdd:PRK13419  84 FEFEPFGEVHLPKLVV--GGFDISITKHVVMMWIASAILLVVFLAagrkykkmtKSQAPkglaNAMEALVEFIRLD---V 158

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  68 VQDNLGKVGQKFFPFVLCLFIFIAMLNILGLFPYVFVPTAQIVITLGISL--------SIIMAVTLLGFFNFklnflsil 139
Cdd:PRK13419 159 AKSNIGHGYEKFLPYLLTVFFFILVCNLLGLVPYGATATGNINVTLTLAVftffitqyAAIKAHGIKGYLAH-------- 230

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 140 MPGGVPLVLAPFLVVIETASYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGMIILSFLPMSimIFITLLEIMVA 219
Cdd:PRK13419 231 LTGGTHWSLWIIMIPIEFIGLFTKPFALTVRLFANMTAGHIVILSLIFISFILKSYIVAVAVSVPFA--IFIYLLELFVA 308

                        250       260
                 ....*....|....*....|..
gi 164421116 220 VIQAYVFCLLTTIYLGDTIALH 241
Cdd:PRK13419 309 FLQAYIFTMLSALFIGLATAHE 330
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 29-241 4.78e-13

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 67.61  E-value: 4.78e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  29 SMMMVLAVTIFWLLLEGNRLIP-------NRWQFIIE-FLYINIHSVVQDNLGKVGQKFFPFVLCLFIFIAMLNILGLFP 100
Cdd:PRK13417  99 TMMWIVAFFLFLIFIPAANIIAknplkvqSRFANTVEvFVNFLRKDIVDESMHGHGHSYYHYIFTLFFFILFCNLMGLVP 178

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 101 YV-----------------------------------FVPTAQIVITLGISLSIIMAVTLLGFFNFKLNFLSILMPGGVP 145
Cdd:PRK13417 179 SVgeltvvasdygglvalgvmdhtphalptfakvwsgITVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVP 258

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 146 LVLAPFLVVIE-TASYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGMIILSFLPmSIMIFItlLEIMVAVIQAY 224
Cdd:PRK13417 259 LLLYPIMWPLEfIVSPMAKTFALTVRLLANMTAGHVIILALMGFIFQFQSWGIVPVSVIG-SGLIYV--LEIFVAFLQAY 335

                        250
                 ....*....|....*..
gi 164421116 225 VFCLLTTIYLGDTIALH 241
Cdd:PRK13417 336 IFVLLTSLFVGLSMHRH 352
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 31-241 5.66e-10

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 57.44  E-value: 5.66e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  31 MMVLAVTIFWLLLEGNRLIPNRWQFIIEFLYINIHSVVQDNLGKVGQKFFPFVLCLFIFIAMLNILGLFPYVFVPTAQIV 110
Cdd:PRK13420  26 IMIVLVLASWLTTRRLSLDPGRFQVALEGVVSTIEDAIKEVLPRHARLVLPFVGTLWIFILVANLIGLIPGFHSPTADLS 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 111 ITLGISLSIIMAVTLLGFFNFKL-NFLSILmpggvpLVLAPFLVVIETASYLIRAISLGVRLAANISA---GHLLFAILS 186
Cdd:PRK13420 106 VTAALALLVFFSVHWFGIRAEGLrEYLKHY------LSPSPFLLPFHLISEITRTLALAVRLFGNIMSlelAALLVLLVA 179

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 164421116 187 GFafnmlsngmiilsFLPMSIMifitLLEIMVAVIQAYVFCLLTTIYLGDTIALH 241
Cdd:PRK13420 180 GF-------------LVPVPIL----MLHIIEALVQAYIFGMLALIYIAGGIQAH 217
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 86-234 7.98e-07

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 48.05  E-value: 7.98e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  86 LFIFIAMLNILGLFPYVFVPTAQIVITLGISLSIIMAVTLlgFFNFKLNFLSILMPGGVPLVLAPF-LVVIETASYLIRA 164
Cdd:MTH00087  58 TFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFL--SFLSKSEKFSVYLSKGSDSFLKTFsMLFVEIVSELSRP 135

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 165 ISLGVRLAANISAGHLLFAILSgfafnmlsngmiILSFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIYL 234
Cdd:MTH00087 136 LALTLRLTVNLMVGHLISSLLN------------FLGEKYVWLSILAIMMECFVAFIQSYIFSRLIYLYL 193
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 31-235 1.79e-06

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 47.38  E-value: 1.79e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  31 MMVLAVTIFWLLLEGNRLIPNRWQFIIEFLYINIHSVVQDNLGKVGQKFFPFVLCLFIFIAMLNILGLFPYVFVPTAQIV 110
Cdd:PRK13421  29 IMAVLAAGSALATRRLSLAPGRLQSVLELVVTTIDAQIRDTMQTDPAPYRALIGTLFLFVLVANWSSLVPGVEPPTAHLE 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116 111 ITLGISLSIIMAVTLLGffnfklnflsiLMPGGVPLVLAPF------LVVIETASYLIRAISLGVRLAANISAGHLLFAi 184
Cdd:PRK13421 109 TDAALALIVFLATIYYG-----------VRARGVRGYLATFaeptwvMIPLNLVEQLTRTFSLIVRLFGNVMSGVFVIG- 176

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 164421116 185 lsgfafnmlsngmIILSFLPMSIMIFITLLEIMVAVIQAYVFCLLTTIYLG 235
Cdd:PRK13421 177 -------------IVLSLAGLLVPIPLMALDLLTGAVQAYIFAVLAMVFIG 214
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 99-227 3.44e-04

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 39.87  E-value: 3.44e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421116  99 FPYVFVPTAQIVITLGISLSIIMAVTLLGFFNFKLNFLSILMPGGVPLVLAPFLVVIETASYLIRAISLGVRLAANISAG 178
Cdd:MTH00050  42 LPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLG 121

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 164421116 179 HLLFAILSGFAFnmlsngmiiLSFLPMSIMIFITLLEIMVAVIQAYVFC 227
Cdd:MTH00050 122 CFGGVALGNLCF---------ISYWWFLVLFFLFFYEVFVALVHWFIVS 161
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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