|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00132 |
ATP synthase F0 subunit 6; Provisional |
1-228 |
2.63e-118 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177190 Cd Length: 227 Bit Score: 336.08 E-value: 2.63e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 1 MAMSFFDQFREPILPGsTPDCYRNRPTLSTLPPHHPHDELTNRLITIQGWLINRFTSQLMLPLNVGGHKWALLLASLMVF 80
Cdd:MTH00132 1 MTLSFFDQFMSPTYLG-IPLIALALTLPWILFPTPTSRWLNNRLLTLQGWFINRFTQQLLLPLNVGGHKWALLLTSLMLF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 81 LITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGV 160
Cdd:MTH00132 80 LITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGV 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 164519171 161 RLTANLTAGHLLIQLIATAVFVLLPMMPTVAILTAAVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 228
Cdd:MTH00132 160 RLTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
42-228 |
7.18e-48 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 156.98 E-value: 7.18e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 42 NRLITIQGWLINRFTSQLMLPLNVGGHKWALLLASLMVFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRN 121
Cdd:TIGR01131 42 SRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRK 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 122 QPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLlpMMPTVAILTAAVLFLL 201
Cdd:TIGR01131 122 HPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGHLLLTLLSGLLFSL--MSSAIFALLLLILVAL 199
|
170 180
....*....|....*....|....*..
gi 164519171 202 TLLEVAVAMIQAYVFVLLLSLYLQENV 228
Cdd:TIGR01131 200 IILEIFVAFIQAYVFTLLTCLYLNDAL 226
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
67-225 |
2.72e-40 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 135.22 E-value: 2.72e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 67 GHKWALLLASLMVFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIII 146
Cdd:cd00310 1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 164519171 147 ETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLLPMmptVAILTAAVLFLLTLLEVAVAMIQAYVFVLLLSLYLQ 225
Cdd:cd00310 81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSS---VGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
66-225 |
1.69e-34 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 122.21 E-value: 1.69e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 66 GGHKWALLLASLMVFLITINMLGLL---PYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTIA-LGHLLPEGTPIPLIP 141
Cdd:pfam00119 53 KGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKKHGLGGyFKKLFVPPVPLPLVP 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 142 VLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLLPMMPTVAILTAAVLFLLTLLEVAVAMIQAYVFVLLLS 221
Cdd:pfam00119 133 LLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTA 212
|
....
gi 164519171 222 LYLQ 225
Cdd:pfam00119 213 VYIS 216
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
67-226 |
7.56e-24 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 94.37 E-value: 7.56e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 67 GHKWALLLASLMVFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTIA-LGHLLPEGTPIPLIPVLII 145
Cdd:COG0356 54 GRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKGLGGyLKHLFFPPFPWLAPLMLPI 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 146 iETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLLpmmptVAILTAAVLFLLTLLEVAVAMIQAYVFVLLLSLYLQ 225
Cdd:COG0356 134 -EIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLL-----LGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYIS 207
|
.
gi 164519171 226 E 226
Cdd:COG0356 208 L 208
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00132 |
ATP synthase F0 subunit 6; Provisional |
1-228 |
2.63e-118 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177190 Cd Length: 227 Bit Score: 336.08 E-value: 2.63e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 1 MAMSFFDQFREPILPGsTPDCYRNRPTLSTLPPHHPHDELTNRLITIQGWLINRFTSQLMLPLNVGGHKWALLLASLMVF 80
Cdd:MTH00132 1 MTLSFFDQFMSPTYLG-IPLIALALTLPWILFPTPTSRWLNNRLLTLQGWFINRFTQQLLLPLNVGGHKWALLLTSLMLF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 81 LITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGV 160
Cdd:MTH00132 80 LITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGV 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 164519171 161 RLTANLTAGHLLIQLIATAVFVLLPMMPTVAILTAAVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 228
Cdd:MTH00132 160 RLTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
|
|
| ATP6 |
MTH00073 |
ATP synthase F0 subunit 6; Provisional |
1-228 |
9.59e-104 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177144 Cd Length: 227 Bit Score: 299.19 E-value: 9.59e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 1 MAMSFFDQFREPILPGsTPDCYRNRPTLSTLPPHHPHDELTNRLITIQGWLINRFTSQLMLPLNVGGHKWALLLASLMVF 80
Cdd:MTH00073 1 MNLSFFDQFLSPTLLG-IPLIMLAMLLPWLLFPTPTNKWLNNRLSTLQIWFLQNFTKQLMLPLNTPGHKWALILTSLMVF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 81 LITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGV 160
Cdd:MTH00073 80 LITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGV 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 164519171 161 RLTANLTAGHLLIQLIATAVFVLLPMMPTVAILTAAVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 228
Cdd:MTH00073 160 RLTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQENV 227
|
|
| ATP6 |
MTH00120 |
ATP synthase F0 subunit 6; Provisional |
1-228 |
1.10e-95 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177181 Cd Length: 227 Bit Score: 278.63 E-value: 1.10e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 1 MAMSFFDQFREPILPGsTPDCYRNRPTLSTLPPHHPHDELTNRLITIQGWLINRFTSQLMLPLNVGGHKWALLLASLMVF 80
Cdd:MTH00120 1 MNLNFFDQFSSPELLG-IPLILLAMLIPALLIPSPKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLMLL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 81 LITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGV 160
Cdd:MTH00120 80 LLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGV 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 164519171 161 RLTANLTAGHLLIQLIATAVFVLLPMMPTVAILTAAVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 228
Cdd:MTH00120 160 RLTANLTAGHLLIQLISTATLNLLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQENT 227
|
|
| ATP6 |
MTH00179 |
ATP synthase F0 subunit 6; Provisional |
1-228 |
7.39e-83 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177230 Cd Length: 227 Bit Score: 246.40 E-value: 7.39e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 1 MAMSFFDQFREPILPGsTPDCYRNRPTLSTLPPHHPHDELTNRLITIQGWLINRFTSQLMLPLNVGGHKWALLLASLMVF 80
Cdd:MTH00179 1 MMLSMFDQFESPSLLG-IPLLALALLLPWLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 81 LITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGV 160
Cdd:MTH00179 80 LLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGV 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 164519171 161 RLTANLTAGHLLIQLIATAVFVLLPMMPTVAILTAAVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 228
Cdd:MTH00179 160 RLTANITAGHLLMHLISSAVFVLMNFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENL 227
|
|
| ATP6 |
MTH00101 |
ATP synthase F0 subunit 6; Validated |
40-227 |
3.20e-69 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177163 Cd Length: 226 Bit Score: 211.73 E-value: 3.20e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 40 LTNRLITIQGWLINRFTSQLMLPLNVGGHKWALLLASLMVFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGM 119
Cdd:MTH00101 38 INNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGF 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 120 RNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLLPMMPTVAILTAAVLF 199
Cdd:MTH00101 118 RNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMSISTTTALITFIILI 197
|
170 180
....*....|....*....|....*...
gi 164519171 200 LLTLLEVAVAMIQAYVFVLLLSLYLQEN 227
Cdd:MTH00101 198 LLTILEFAVALIQAYVFTLLVSLYLHDN 225
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
42-228 |
7.18e-48 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 156.98 E-value: 7.18e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 42 NRLITIQGWLINRFTSQLMLPLNVGGHKWALLLASLMVFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRN 121
Cdd:TIGR01131 42 SRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRK 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 122 QPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLlpMMPTVAILTAAVLFLL 201
Cdd:TIGR01131 122 HPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGHLLLTLLSGLLFSL--MSSAIFALLLLILVAL 199
|
170 180
....*....|....*....|....*..
gi 164519171 202 TLLEVAVAMIQAYVFVLLLSLYLQENV 228
Cdd:TIGR01131 200 IILEIFVAFIQAYVFTLLTCLYLNDAL 226
|
|
| ATP6 |
MTH00035 |
ATP synthase F0 subunit 6; Validated |
64-228 |
4.82e-43 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177110 Cd Length: 229 Bit Score: 144.73 E-value: 4.82e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 64 NVGGHKWALLLASLMVFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVL 143
Cdd:MTH00035 66 NPNTAPWAGLLTTVFILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLM 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 144 IIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLLPmMPTVAILTAAVLFLLTLLEVAVAMIQAYVFVLLLSLY 223
Cdd:MTH00035 146 VWIETLSLFAQPIALGLRLAANLTAGHLLIFLLSTAIWELSN-SPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFY 224
|
....*
gi 164519171 224 LQENV 228
Cdd:MTH00035 225 LEQNI 229
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
67-225 |
2.72e-40 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 135.22 E-value: 2.72e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 67 GHKWALLLASLMVFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIII 146
Cdd:cd00310 1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 164519171 147 ETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLLPMmptVAILTAAVLFLLTLLEVAVAMIQAYVFVLLLSLYLQ 225
Cdd:cd00310 81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSS---VGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP6 |
MTH00157 |
ATP synthase F0 subunit 6; Provisional |
72-226 |
3.00e-40 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214441 Cd Length: 223 Bit Score: 137.22 E-value: 3.00e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 72 LLLASLMVFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISL 151
Cdd:MTH00157 70 LIFISLFSFILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISN 149
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 164519171 152 FIRPLALGVRLTANLTAGHLLIQLIATAVFVLLPMMPTVAILTaavLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 226
Cdd:MTH00157 150 LIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLSSMILSILILI---QILLLILESAVAIIQSYVFSVLSTLYSSE 221
|
|
| ATP6 |
MTH00176 |
ATP synthase F0 subunit 6; Provisional |
70-227 |
2.93e-38 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214449 Cd Length: 229 Bit Score: 132.46 E-value: 2.93e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 70 WALLLASLMVFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETI 149
Cdd:MTH00176 71 SASIIISLFILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELV 150
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 164519171 150 SLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLLPMMPTVAILTAAVLFLLTLLEVAVAMIQAYVFVLLLSLYLQEN 227
Cdd:MTH00176 151 SLLIRPLTLAVRLAANLSAGHLLLGLLGAAMWGLLPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEH 228
|
|
| ATP6 |
MTH00173 |
ATP synthase F0 subunit 6; Provisional |
41-226 |
1.62e-35 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214448 Cd Length: 231 Bit Score: 125.36 E-value: 1.62e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 41 TNRLITIQGWLINRFTSQLMLPLNVGGHKWALLLASLMVFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMR 120
Cdd:MTH00173 42 SSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFLFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLF 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 121 NQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAV-FVLLPMMPTVAILTAAVLF 199
Cdd:MTH00173 122 YNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTVRLLANISAGHIVLTLIGNYLsSSLFSSSVVSLLLVLLIQV 201
|
170 180
....*....|....*....|....*..
gi 164519171 200 LLTLLEVAVAMIQAYVFVLLLSLYLQE 226
Cdd:MTH00173 202 GYFIFEVAVMLIQAYIFTLLIKLYSDE 228
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
66-225 |
1.69e-34 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 122.21 E-value: 1.69e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 66 GGHKWALLLASLMVFLITINMLGLL---PYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTIA-LGHLLPEGTPIPLIP 141
Cdd:pfam00119 53 KGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKKHGLGGyFKKLFVPPVPLPLVP 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 142 VLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLLPMMPTVAILTAAVLFLLTLLEVAVAMIQAYVFVLLLS 221
Cdd:pfam00119 133 LLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTA 212
|
....
gi 164519171 222 LYLQ 225
Cdd:pfam00119 213 VYIS 216
|
|
| ATP6 |
MTH00172 |
ATP synthase F0 subunit 6; Provisional |
42-224 |
1.34e-30 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214447 Cd Length: 232 Bit Score: 112.83 E-value: 1.34e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 42 NRLITIQGWLINRFTSQLMLPLNVGGHKWALLLASLMVFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRN 121
Cdd:MTH00172 43 KRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFIISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWR 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 122 QPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLLPMMPTVAILTAAVLFLL 201
Cdd:MTH00172 123 FKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFAILAGFGFNMLCASGFLSLFPLLIMVFI 202
|
170 180
....*....|....*....|...
gi 164519171 202 TLLEVAVAMIQAYVFVLLLSLYL 224
Cdd:MTH00172 203 TLLEIAVAVIQAYVFCLLTTIYL 225
|
|
| ATP6 |
MTH00005 |
ATP synthase F0 subunit 6; Provisional |
42-223 |
2.46e-28 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 164583 Cd Length: 231 Bit Score: 106.74 E-value: 2.46e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 42 NRLITIQGWLINRFTSQLMLPLNVGGHKWALLLASLMVFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRN 121
Cdd:MTH00005 45 NRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTF 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 122 QPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLLPMMPTVAILTAAVLFLL 201
Cdd:MTH00005 125 SPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFRLAANMSAGHIVLSLIGIYAASALFSSISSTILLILTQMGY 204
|
170 180
....*....|....*....|..
gi 164519171 202 TLLEVAVAMIQAYVFVLLLSLY 223
Cdd:MTH00005 205 ILFEVGICLIQAYIFCLLLSLY 226
|
|
| ATP6 |
MTH00175 |
ATP synthase F0 subunit 6; Provisional |
63-228 |
5.81e-26 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177228 Cd Length: 244 Bit Score: 100.85 E-value: 5.81e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 63 LNVGGHKWALLLASLMVFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPV 142
Cdd:MTH00175 75 LGKSGQKYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPF 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 143 LIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLLPM-MPTVAILTAAVLFLLTLLEVAVAMIQAYVFVLLLS 221
Cdd:MTH00175 155 LVLIETLSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNgLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTT 234
|
....*..
gi 164519171 222 LYLQENV 228
Cdd:MTH00175 235 IYLGDTI 241
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
67-226 |
7.56e-24 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 94.37 E-value: 7.56e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 67 GHKWALLLASLMVFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTIA-LGHLLPEGTPIPLIPVLII 145
Cdd:COG0356 54 GRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKGLGGyLKHLFFPPFPWLAPLMLPI 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 146 iETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLLpmmptVAILTAAVLFLLTLLEVAVAMIQAYVFVLLLSLYLQ 225
Cdd:COG0356 134 -EIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLL-----LGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYIS 207
|
.
gi 164519171 226 E 226
Cdd:COG0356 208 L 208
|
|
| PRK05815 |
PRK05815 |
F0F1 ATP synthase subunit A; Validated |
67-226 |
3.79e-21 |
|
F0F1 ATP synthase subunit A; Validated
Pssm-ID: 235617 Cd Length: 227 Bit Score: 87.54 E-value: 3.79e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 67 GHKWALLLASLMVFLITINMLGLLP-YTFTPTTQLSLNMGFAVPLWLATVIIGMRNQptiALGHLLPEGTPIPLIPVLII 145
Cdd:PRK05815 69 GKKFAPLAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGIKKK---GLGGYLKEFYLQPHPLLLPI 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 146 iETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLLPMMPTVAILTAAvlflLTLLEVAVAMIQAYVFVLLLSLYLQ 225
Cdd:PRK05815 146 -EIISEFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLALAPLILPVA----WTIFEIFVGTLQAYIFMMLTIVYIS 220
|
.
gi 164519171 226 E 226
Cdd:PRK05815 221 M 221
|
|
| ATP6 |
MTH00174 |
ATP synthase F0 subunit 6; Provisional |
42-228 |
2.69e-18 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 133799 Cd Length: 252 Bit Score: 80.75 E-value: 2.69e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 42 NRLITIQGWLINRFTSQLMLPLNVGGHKWALLLASLMVFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRN 121
Cdd:MTH00174 62 NRILVGLELIYSHFYTVLKDNLGNKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLIT 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 122 QPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLLPMMPTV-AILTAAVLFL 200
Cdd:MTH00174 142 FRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIgSFVPFAILIF 221
|
170 180
....*....|....*....|....*...
gi 164519171 201 LTLLEVAVAMIQAYVFVLLLSLYLQENV 228
Cdd:MTH00174 222 VTILEMAVAIIQAYVFTLLTIVYLRDTV 249
|
|
| PRK13419 |
PRK13419 |
F0F1 ATP synthase subunit A; Provisional |
74-224 |
2.47e-14 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237381 Cd Length: 342 Bit Score: 70.93 E-value: 2.47e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 74 LASLMVFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFI 153
Cdd:PRK13419 174 LLTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFITQYAAIKAHGIKGYLAHLTGGTHWSLWIIMIPIEFIGLFT 253
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 164519171 154 RPLALGVRLTANLTAGHLLIQLIATAVFVLLPMMPTVAILTAAVLFLLtLLEVAVAMIQAYVFVLLLSLYL 224
Cdd:PRK13419 254 KPFALTVRLFANMTAGHIVILSLIFISFILKSYIVAVAVSVPFAIFIY-LLELFVAFLQAYIFTMLSALFI 323
|
|
| ATP6 |
MTH00087 |
ATP synthase F0 subunit 6; Provisional |
76-226 |
1.90e-12 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177152 Cd Length: 195 Bit Score: 63.46 E-value: 1.90e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 76 SLMVFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQptIALGHLLP-EGTPIPLIPVLIIIETISLFIR 154
Cdd:MTH00087 57 FTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKS--EKFSVYLSkGSDSFLKTFSMLFVEIVSELSR 134
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 164519171 155 PLALGVRLTANLTAGHLLIQLIATAVFVLLPMMptvailtaavlFLLTLLEVAVAMIQAYVFVLLLSLYLQE 226
Cdd:MTH00087 135 PLALTLRLTVNLMVGHLISSLLNFLGEKYVWLS-----------ILAIMMECFVAFIQSYIFSRLIYLYLNE 195
|
|
| PRK13417 |
PRK13417 |
F0F1 ATP synthase subunit A; Provisional |
95-224 |
4.91e-07 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237380 Cd Length: 352 Bit Score: 49.50 E-value: 4.91e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 95 TPTTQLSLNMGFAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETI-SLFIRPLALGVRLTANLTAGHLLI 173
Cdd:PRK13417 217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 164519171 174 qlIATAVFVLLPMMPTVAILTAAVLFLLTLLEVAVAMIQAYVFVLLLSLYL 224
Cdd:PRK13417 297 --LALMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLFV 345
|
|
| PRK13420 |
PRK13420 |
F0F1 ATP synthase subunit A; Provisional |
73-224 |
1.08e-03 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237382 [Multi-domain] Cd Length: 226 Bit Score: 38.96 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519171 73 LLASLMVFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTIA-LGHLLpegtpiPLIPVLIIIETISL 151
Cdd:PRK13420 77 FVGTLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFGIRAEGLREyLKHYL------SPSPFLLPFHLISE 150
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 164519171 152 FIRPLALGVRLTANLTAghllIQLIATAVFVLLPMMPTVAILtaavlflltLLEVAVAMIQAYVFVLLLSLYL 224
Cdd:PRK13420 151 ITRTLALAVRLFGNIMS----LELAALLVLLVAGFLVPVPIL---------MLHIIEALVQAYIFGMLALIYI 210
|
|
|