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Conserved domains on  [gi|170676850|ref|YP_001742093|]
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ATP synthase F0 subunit 6 (mitochondrion) [Suberites domuncula]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009612)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 1-244 2.12e-134

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 177228  Cd Length: 244  Bit Score: 378.20  E-value: 2.12e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850   1 MLAAYFDQFNVIRLITIQASLGDWLVTFTNSSMMMVLAVTAIWLLLRGDRLIPSRWQSIMELIHSNMRSVVQDNLGQKGQ 80
Cdd:MTH00175   1 MLAAYFDQFNIIRLITIQAFLGDWLVTFTNSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  81 KYFPFILCLFLFIAMLNILGLFPYVFTPTAHLVMTFGLSLSIIIAVTISGFISFKLNFLSILMPGGVPLALAPVLVLIET 160
Cdd:MTH00175  81 KYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIET 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 161 MSYMIRAISLGVRLAANISAGHLLFAIISGFAFNMMVNGLMVLSFFPILILVFITLLEIMVAVIQAYVFCLLTTIYLGDT 240
Cdd:MTH00175 161 LSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDT 240


                 ....
gi 170676850 241 IALH 244
Cdd:MTH00175 241 IALH 244
 
Name Accession Description Interval E-value
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 1-244 2.12e-134

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 378.20  E-value: 2.12e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850   1 MLAAYFDQFNVIRLITIQASLGDWLVTFTNSSMMMVLAVTAIWLLLRGDRLIPSRWQSIMELIHSNMRSVVQDNLGQKGQ 80
Cdd:MTH00175   1 MLAAYFDQFNIIRLITIQAFLGDWLVTFTNSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  81 KYFPFILCLFLFIAMLNILGLFPYVFTPTAHLVMTFGLSLSIIIAVTISGFISFKLNFLSILMPGGVPLALAPVLVLIET 160
Cdd:MTH00175  81 KYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIET 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 161 MSYMIRAISLGVRLAANISAGHLLFAIISGFAFNMMVNGLMVLSFFPILILVFITLLEIMVAVIQAYVFCLLTTIYLGDT 240
Cdd:MTH00175 161 LSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDT 240


                 ....
gi 170676850 241 IALH 244
Cdd:MTH00175 241 IALH 244
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 24-241 4.73e-55

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 176.24  E-value: 4.73e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850   24 WLVTFTNSSMMMVLAVTAIWLLLR-GDRLIPSRWQSIMELIHSNMRSVVQDNLGQKGQKYFPFILCLFLFIAMLNILGLF 102
Cdd:TIGR01131  11 TLFSLTLLSLILLLSLLIFLISSSlSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGLI 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  103 PYVFTPTAHLVMTFGLSLSIIIAVTISGFISFKLNFLSILMPGGVPLALAPVLVLIETMSYMIRAISLGVRLAANISAGH 182
Cdd:TIGR01131  91 PYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGH 170

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 170676850  183 LLFAIISGFAFNMMVNGLMvlsFFPILILVFITLLEIMVAVIQAYVFCLLTTIYLGDTI 241
Cdd:TIGR01131 171 LLLTLLSGLLFSLMSSAIF---ALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 79-238 2.82e-45

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 148.70  E-value: 2.82e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  79 GQKYFPFILCLFLFIAMLNILGLFPYVFTPTAHLVMTFGLSLSIIIAVTISGFISFKLNFLSILMPGGVPLALAPVLVLI 158
Cdd:cd00310    1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 159 ETMSYMIRAISLGVRLAANISAGHLLFAIISGFAFNMMVnglmVLSFFPILILVFITLLEIMVAVIQAYVFCLLTTIYLG 238
Cdd:cd00310   81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLS----SVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 34-242 6.67e-43

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 144.45  E-value: 6.67e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  34 MMVLAVTAIWLLLRGDRLIPSRWQSIMELIHSNMRSVVQDNLGQKGQKYFPFILCLFLFIAMLNILGLFPYVFTPTAHLV 113
Cdd:COG0356    9 AMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADIN 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 114 MTFGLSLSIIIAVTISGFISFKL-NFLSILMPGGVPlALAPVLVLIETMSYMIRAISLGVRLAANISAGHLLFAIISGFA 192
Cdd:COG0356   89 VTLALALIVFVLVHYYGIKKKGLgGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLA 167

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 170676850 193 FnmmvngLMVLSFFPILILVFITLLEIMVAVIQAYVFCLLTTIYLGDTIA 242
Cdd:COG0356  168 P------FLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISLAVE 211
ATP-synt_A pfam00119
ATP synthase A chain;
33-238 8.80e-42

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 141.86  E-value: 8.80e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850   33 MMMVLAVTAIWLLLRGDRLIPSRWQSIMELIHSNMRSVVQDNLGQK-GQKYFPFILCLFLFIAMLNILGLF---PYVFTP 108
Cdd:pfam00119   7 VALILLLFLLLATRKTKKLVPGRLQNFVEMLVEFVDNIVKDNIGKKkGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTV 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  109 TAHLVMTFGLSLSIIIAVTISGFIS--FKLNFLSILMPGgVPLALAPVLVLIETMSYMIRAISLGVRLAANISAGHLLFA 186
Cdd:pfam00119  87 TADINVTLALALIVFLLVHYYGIKKhgLGGYFKKLFVPP-VPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLL 165

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 170676850  187 IISGFAFNMMVNGLmVLSFFPILILVFITLLEIMVAVIQAYVFCLLTTIYLG 238
Cdd:pfam00119 166 LLAGLIFALLSAGF-LLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
 
Name Accession Description Interval E-value
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 1-244 2.12e-134

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 378.20  E-value: 2.12e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850   1 MLAAYFDQFNVIRLITIQASLGDWLVTFTNSSMMMVLAVTAIWLLLRGDRLIPSRWQSIMELIHSNMRSVVQDNLGQKGQ 80
Cdd:MTH00175   1 MLAAYFDQFNIIRLITIQAFLGDWLVTFTNSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  81 KYFPFILCLFLFIAMLNILGLFPYVFTPTAHLVMTFGLSLSIIIAVTISGFISFKLNFLSILMPGGVPLALAPVLVLIET 160
Cdd:MTH00175  81 KYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIET 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 161 MSYMIRAISLGVRLAANISAGHLLFAIISGFAFNMMVNGLMVLSFFPILILVFITLLEIMVAVIQAYVFCLLTTIYLGDT 240
Cdd:MTH00175 161 LSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDT 240


                 ....
gi 170676850 241 IALH 244
Cdd:MTH00175 241 IALH 244
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 1-244 2.65e-94

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 276.15  E-value: 2.65e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850   1 MLAAYFDQFNVIRLITIqaslgdwlvtfTNSSMMMVLAVTAIWLLLRGDRLIPSRWQSIMELIHSNMRSVVQDNLGQKGQ 80
Cdd:MTH00172   1 MSSSYFDQFNIVWLIGL-----------TNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGL 69

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  81 KYFPFILCLFLFIAMLNILGLFPYVFTPTAHLVMTFGLSLSIIIAVTISGFISFKLNFLSILMPGGVPLALAPVLVLIET 160
Cdd:MTH00172  70 KYFPFIISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIET 149

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 161 MSYMIRAISLGVRLAANISAGHLLFAIISGFAFNMMVNGlMVLSFFPILILVFITLLEIMVAVIQAYVFCLLTTIYLGDT 240
Cdd:MTH00172 150 VSYISRAISLGVRLAANLSAGHLLFAILAGFGFNMLCAS-GFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYLADT 228


                 ....
gi 170676850 241 IALH 244
Cdd:MTH00172 229 IVLH 232
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 1-244 3.34e-59

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 187.45  E-value: 3.34e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850   1 MLAAYFDQFNVIRLITIQASLGDWLVT-----FTNSSMMMVLAVTAIWLLLR---GDRLIPSRWQSIMELIHSNMRSVVQ 72
Cdd:MTH00174   1 MVAAYFDQFNIIPIFSIWVYFLSFWINgeffcFTNTFFMMSFAVFLFYTIGAkgnNNTLVPNRILVGLELIYSHFYTVLK 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  73 DNLGQKGQKYFPFILCLFLFIAMLNILGLFPYVFTPTAHLVMTFGLSLSIIIAVTISGFISFKLNFLSILMPGGVPLALA 152
Cdd:MTH00174  81 DNLGNKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALA 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 153 PVLVLIETMSYMIRAISLGVRLAANISAGHLLFAIISGFAFNMMVNGLMVLSFFPILILVFITLLEIMVAVIQAYVFCLL 232
Cdd:MTH00174 161 PLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIGSFVPFAILIFVTILEMAVAIIQAYVFTLL 240

                        250
                 ....*....|..
gi 170676850 233 TTIYLGDTIALH 244
Cdd:MTH00174 241 TIVYLRDTVELH 252
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 24-241 4.73e-55

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 176.24  E-value: 4.73e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850   24 WLVTFTNSSMMMVLAVTAIWLLLR-GDRLIPSRWQSIMELIHSNMRSVVQDNLGQKGQKYFPFILCLFLFIAMLNILGLF 102
Cdd:TIGR01131  11 TLFSLTLLSLILLLSLLIFLISSSlSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGLI 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  103 PYVFTPTAHLVMTFGLSLSIIIAVTISGFISFKLNFLSILMPGGVPLALAPVLVLIETMSYMIRAISLGVRLAANISAGH 182
Cdd:TIGR01131  91 PYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGH 170

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 170676850  183 LLFAIISGFAFNMMVNGLMvlsFFPILILVFITLLEIMVAVIQAYVFCLLTTIYLGDTI 241
Cdd:TIGR01131 171 LLLTLLSGLLFSLMSSAIF---ALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 79-238 2.82e-45

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 148.70  E-value: 2.82e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  79 GQKYFPFILCLFLFIAMLNILGLFPYVFTPTAHLVMTFGLSLSIIIAVTISGFISFKLNFLSILMPGGVPLALAPVLVLI 158
Cdd:cd00310    1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 159 ETMSYMIRAISLGVRLAANISAGHLLFAIISGFAFNMMVnglmVLSFFPILILVFITLLEIMVAVIQAYVFCLLTTIYLG 238
Cdd:cd00310   81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLS----SVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 34-242 6.67e-43

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 144.45  E-value: 6.67e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  34 MMVLAVTAIWLLLRGDRLIPSRWQSIMELIHSNMRSVVQDNLGQKGQKYFPFILCLFLFIAMLNILGLFPYVFTPTAHLV 113
Cdd:COG0356    9 AMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADIN 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 114 MTFGLSLSIIIAVTISGFISFKL-NFLSILMPGGVPlALAPVLVLIETMSYMIRAISLGVRLAANISAGHLLFAIISGFA 192
Cdd:COG0356   89 VTLALALIVFVLVHYYGIKKKGLgGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLA 167

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 170676850 193 FnmmvngLMVLSFFPILILVFITLLEIMVAVIQAYVFCLLTTIYLGDTIA 242
Cdd:COG0356  168 P------FLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISLAVE 211
ATP-synt_A pfam00119
ATP synthase A chain;
33-238 8.80e-42

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 141.86  E-value: 8.80e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850   33 MMMVLAVTAIWLLLRGDRLIPSRWQSIMELIHSNMRSVVQDNLGQK-GQKYFPFILCLFLFIAMLNILGLF---PYVFTP 108
Cdd:pfam00119   7 VALILLLFLLLATRKTKKLVPGRLQNFVEMLVEFVDNIVKDNIGKKkGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTV 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  109 TAHLVMTFGLSLSIIIAVTISGFIS--FKLNFLSILMPGgVPLALAPVLVLIETMSYMIRAISLGVRLAANISAGHLLFA 186
Cdd:pfam00119  87 TADINVTLALALIVFLLVHYYGIKKhgLGGYFKKLFVPP-VPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLL 165

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 170676850  187 IISGFAFNMMVNGLmVLSFFPILILVFITLLEIMVAVIQAYVFCLLTTIYLG 238
Cdd:pfam00119 166 LLAGLIFALLSAGF-LLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 51-240 6.01e-39

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 134.53  E-value: 6.01e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  51 LIPSRWQSIMELIHSNMRSVVQDNLGQKGQKYFPFILCLFLFIAMLNILGLFPYVFTPTAHLVMTFGLSLSIIIAVTISG 130
Cdd:MTH00157  37 LIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFG 116

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 131 FISFKLNFLSILMPGGVPLALAPVLVLIETMSYMIRAISLGVRLAANISAGHLLFAIISGFAFNMMVNGLMVLSFFPILI 210
Cdd:MTH00157 117 WINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILL 196

                        170       180       190
                 ....*....|....*....|....*....|
gi 170676850 211 LvfitLLEIMVAVIQAYVFCLLTTIYLGDT 240
Cdd:MTH00157 197 L----ILESAVAIIQSYVFSVLSTLYSSEV 222
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 24-244 6.03e-39

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 134.54  E-value: 6.03e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  24 WLVTFTNSSMMMVLAVTAIWLLL----RGDRLIPSRWQSIMELIHSNMRSVVQDNLGQKGQKYFPFILCLFLFIAMLNIL 99
Cdd:PRK05815  10 GGFNFDSLLLSVLLGVLILLLFAlvatRKLSGVPGGLQNFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLFLFILLMNLL 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 100 GLFP-YVFTPTAHLVMTFGLSLSIIIAVTISGFISFKL-NFLSILMPGGVPLalapvLVLIETMSYMIRAISLGVRLAAN 177
Cdd:PRK05815  90 GLIPyLLFPPTADINVTLALALIVFVLVIYYGIKKKGLgGYLKEFYLQPHPL-----LLPIEIISEFSRPISLSLRLFGN 164

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 170676850 178 ISAGHLLFAIISGFAFNMmvnglMVLSFFPILILVFITLLEIMVAVIQAYVFCLLTTIYLGDTIALH 244
Cdd:PRK05815 165 MLAGELILALIALLGGAG-----LLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYISMAVEEE 226
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-237 4.30e-36

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 127.25  E-value: 4.30e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850   1 MLAAYFDQFNVIRLITIqaslgdwlvtftnSSMMMVLAVTAIWLLLRGDRLIPSRWQSIMELIHSNMRSVVQDNLGQKGQ 80
Cdd:MTH00120   1 MNLNFFDQFSSPELLGI-------------PLILLAMLIPALLIPSPKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGH 67

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  81 KYFPFILCLFLFIAMLNILGLFPYVFTPTAHLVMTFGLSLSIIIAVTISGFISFKLNFLSILMPGGVPLALAPVLVLIET 160
Cdd:MTH00120  68 KWALILTSLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIET 147

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 170676850 161 MSYMIRAISLGVRLAANISAGHLLFAIISGFAFNMMvNGLMVLSFFPILILVFITLLEIMVAVIQAYVFCLLTTIYL 237
Cdd:MTH00120 148 ISLLIRPLALGVRLTANLTAGHLLIQLISTATLNLL-PTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 35-237 1.08e-35

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 126.22  E-value: 1.08e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  35 MVLAVTAIWLLLRGD--RLIPSRWQSIMELIHSNMRSVVQDNLGQKGQKYFPFILCLFLFIAMLNILGLFPYVFTPTAHL 112
Cdd:MTH00179  20 LALALLLPWLLFPSLtnRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFLLTLNLLGLLPYTFTPTTQL 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 113 VMTFGLSLSIIIAVTISGFISFKLNFLSILMPGGVPLALAPVLVLIETMSYMIRAISLGVRLAANISAGHLLFAIISGFA 192
Cdd:MTH00179 100 SLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVRLTANITAGHLLMHLISSAV 179

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 170676850 193 FNMMvNGLMVLSFFPILILVFITLLEIMVAVIQAYVFCLLTTIYL 237
Cdd:MTH00179 180 FVLM-NFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 75-237 3.36e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 122.29  E-value: 3.36e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  75 LGQKGQKYFPFILCLFLFIAMLNILGLFPYVFTPTAHLVMTFGLSLSIIIAVTISGFISFKLNFLSILMPGGVPLALAPV 154
Cdd:MTH00132  62 LNVGGHKWALLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPV 141

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 155 LVLIETMSYMIRAISLGVRLAANISAGHLLFAIISGFAFNMMVNgLMVLSFFPILILVFITLLEIMVAVIQAYVFCLLTT 234
Cdd:MTH00132 142 LIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAAFVLLPL-MPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLS 220


                 ...
gi 170676850 235 IYL 237
Cdd:MTH00132 221 LYL 223
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 85-240 7.98e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 121.51  E-value: 7.98e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  85 FILCLFLFIAMLNILGLFPYVFTPTAHLVMTFGLSLSIIIAVTISGFISFKLNFLSILMPGGVPLALAPVLVLIETMSYM 164
Cdd:MTH00173  74 LLSSLFLFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSIL 153

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 170676850 165 IRAISLGVRLAANISAGHLLFAIISGFAFNMMVNGLMVLSFFPILILVFITLLEIMVAVIQAYVFCLLTTIYLGDT 240
Cdd:MTH00173 154 IRPLTLTVRLLANISAGHIVLTLIGNYLSSSLFSSSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDEH 229
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 28-239 1.75e-33

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 120.44  E-value: 1.75e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  28 FTNSSMMMVLAVTAI-----WLLLRGDRLIPSRWQSI----MELIHSNMRSVVQdnlgQKGQKYFPFILCLFLFIAMLNI 98
Cdd:MTH00101   9 FITPTILGLPIVTLIimfpsLLFPTPNRLINNRLISIqqwlIQLTSKQMMTIHN----TKGQTWSLMLMSLILFIGSTNL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  99 LGLFPYVFTPTAHLVMTFGLSLSIIIAVTISGFISFKLNFLSILMPGGVPLALAPVLVLIETMSYMIRAISLGVRLAANI 178
Cdd:MTH00101  85 LGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANI 164

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 170676850 179 SAGHLLFAIISGFAFNMMVNGLMVlSFFPILILVFITLLEIMVAVIQAYVFCLLTTIYLGD 239
Cdd:MTH00101 165 TAGHLLIHLIGGATLALMSISTTT-ALITFIILILLTILEFAVALIQAYVFTLLVSLYLHD 224
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 75-237 4.35e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 116.99  E-value: 4.35e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  75 LGQKGQKYFPFILCLFLFIAMLNILGLFPYVFTPTAHLVMTFGLSLSIIIAVTISGFISFKLNFLSILMPGGVPLALAPV 154
Cdd:MTH00073  62 LNTPGHKWALILTSLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPI 141

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 155 LVLIETMSYMIRAISLGVRLAANISAGHLLFAIISGFAFNMMVNgLMVLSFFPILILVFITLLEIMVAVIQAYVFCLLTT 234
Cdd:MTH00073 142 LIIIETISLFIRPLALGVRLTANLTAGHLLIQLISTATLVLLPL-MPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLS 220


                 ...
gi 170676850 235 IYL 237
Cdd:MTH00073 221 LYL 223
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 31-239 6.40e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 116.76  E-value: 6.40e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  31 SSMMMVLAVTAIWLLLRGDRLIPSRWQSIMELIHSNMRSVVQDNLGQKGQKYFPFILCLFLFIAMLNILGLFPYVFTPTA 110
Cdd:MTH00005  22 STAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALFTMIILMNLSGLLPYVFSTSS 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 111 HLVMTFGLSLSIIIAVTISGFISFKLNFLSILMPGGVPLALAPVLVLIETMSYMIRAISLGVRLAANISAGHLLFAIISG 190
Cdd:MTH00005 102 HLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFRLAANMSAGHIVLSLIGI 181

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 170676850 191 FAFNMMVNGLMVLSFFpILILVFITLLEIMVAVIQAYVFCLLTTIYLGD 239
Cdd:MTH00005 182 YAASALFSSISSTILL-ILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 52-237 1.48e-30

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 113.14  E-value: 1.48e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  52 IPSRWQSIMELIHSNMRSVVQDNLGQKGQKYFPFILCLFLFIAMLNILGLFPYVFTPTAHLVMTFGLSLSIIIAVTISGF 131
Cdd:MTH00035  42 LPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVFILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGF 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 132 ISFKLNFLSILMPGGVPLALAPVLVLIETMSYMIRAISLGVRLAANISAGHLLFAIISGfAFNMMVNGLMVlSFFPILIL 211
Cdd:MTH00035 122 YLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLRLAANLTAGHLLIFLLST-AIWELSNSPLI-SIITLIIF 199

                        170       180
                 ....*....|....*....|....*.
gi 170676850 212 VFITLLEIMVAVIQAYVFCLLTTIYL 237
Cdd:MTH00035 200 FLLFILEIGVACIQAYVFTALVHFYL 225
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-239 2.96e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 109.74  E-value: 2.96e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850   1 MLAAYFDQFNVIRLITIQASLGDWLVTFTNSSMMMvlavTAIWLllrgdrlIPSRWQSIMELIHSNMRSVVQDNLGQKGQ 80
Cdd:MTH00176   1 MLVDLFSSFDPPNKNIFSMISLSWITLLLFLLLMP----SSVWF-------CPSKLQVFMLMFSTFLPEMILRSNGSYIL 69

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  81 KYFPFILCLFLFIAMLNILGLFPYVFTPTAHLVMTFGLSLSIIIAVTISGFISFKLNFLSILMPGGVPLALAPVLVLIET 160
Cdd:MTH00176  70 GSASIIISLFILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIEL 149

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 170676850 161 MSYMIRAISLGVRLAANISAGHLLFAIISGFAFNMMVNGLMVLSFFPIlILVFITLLEIMVAVIQAYVFCLLTTIYLGD 239
Cdd:MTH00176 150 VSLLIRPLTLAVRLAANLSAGHLLLGLLGAAMWGLLPVSPLIGFLLLI-VQILYFMFEIAVCMIQAYVFTLLLSLYLDE 227
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 6-244 4.72e-19

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 84.41  E-value: 4.72e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850   6 FDQFNVIRLITIQasLGDWLVTFTNSSMMMVLAvTAIWLLL----------RGDRLIPSRWQSIMELIHSNMR-SVVQDN 74
Cdd:PRK13419  86 FEPFGEVHLPKLV--VGGFDISITKHVVMMWIA-SAILLVVflaagrkykkMTKSQAPKGLANAMEALVEFIRlDVAKSN 162

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  75 LGQKGQKYFPFILCLFLFIAMLNILGLFPYVFTPTAHLVMTFGLSLSIIIAVTISGFISFKLNFLSILMPGGVPLALAPV 154
Cdd:PRK13419 163 IGHGYEKFLPYLLTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFITQYAAIKAHGIKGYLAHLTGGTHWSLWII 242

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 155 LVLIETMSYMIRAISLGVRLAANISAGHllFAIISGFAFNMMVNGLMVLSFFPILILVFITLLEIMVAVIQAYVFCLLTT 234
Cdd:PRK13419 243 MIPIEFIGLFTKPFALTVRLFANMTAGH--IVILSLIFISFILKSYIVAVAVSVPFAIFIYLLELFVAFLQAYIFTMLSA 320

                        250
                 ....*....|
gi 170676850 235 IYLGDTIALH 244
Cdd:PRK13419 321 LFIGLATAHE 330
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 24-244 1.01e-16

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 78.01  E-value: 1.01e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  24 WLVTFtnssMMMVLAVTAIWLLLRGDRLIPSRWQSIMELIHSNMR-SVVQDNLGQKGQKYFPFILCLFLFIAMLNILGLF 102
Cdd:PRK13417 102 WIVAF----FLFLIFIPAANIIAKNPLKVQSRFANTVEVFVNFLRkDIVDESMHGHGHSYYHYIFTLFFFILFCNLMGLV 177

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 103 PYV-----------------------------------FTPTAHLVMTFGLSLSIIIAVTISGFISFKLNFLSILMPGGV 147
Cdd:PRK13417 178 PSVgeltvvasdygglvalgvmdhtphalptfakvwsgITVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGV 257

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 148 PLALAPVLVLIE-TMSYMIRAISLGVRLAANISAGHLLFAIISGFAFNMMVNGLMVLSffpILILVFITLLEIMVAVIQA 226
Cdd:PRK13417 258 PLLLYPIMWPLEfIVSPMAKTFALTVRLLANMTAGHVIILALMGFIFQFQSWGIVPVS---VIGSGLIYVLEIFVAFLQA 334

                        250
                 ....*....|....*...
gi 170676850 227 YVFCLLTTIYLGDTIALH 244
Cdd:PRK13417 335 YIFVLLTSLFVGLSMHRH 352
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 34-244 6.34e-14

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 68.62  E-value: 6.34e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  34 MMVLAVTAIWLLLRGDRLIPSRWQSIMELIHSNMRSVVQDNLGQKGQKYFPFILCLFLFIAMLNILGLFPYVFTPTAHLV 113
Cdd:PRK13420  26 IMIVLVLASWLTTRRLSLDPGRFQVALEGVVSTIEDAIKEVLPRHARLVLPFVGTLWIFILVANLIGLIPGFHSPTADLS 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 114 MTFGLSLSIIIAVTISGFISFKLN--FLSILMPggvplalAPVLVLIETMSYMIRAISLGVRLAANISAghllfaiisgf 191
Cdd:PRK13420 106 VTAALALLVFFSVHWFGIRAEGLReyLKHYLSP-------SPFLLPFHLISEITRTLALAVRLFGNIMS----------- 167

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 170676850 192 afnMMVNGLMVLSFFPILILVFITLLEIMVAVIQAYVFCLLTTIYLGDTIALH 244
Cdd:PRK13420 168 ---LELAALLVLLVAGFLVPVPILMLHIIEALVQAYIFGMLALIYIAGGIQAH 217
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 33-238 1.93e-13

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 67.41  E-value: 1.93e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  33 MMMVLAVTAiWLLLRGDRLIPSRWQSIMELIHSNMRSVVQDNLGQKGQKYFPFILCLFLFIAMLNILGLFPYVFTPTAHL 112
Cdd:PRK13421  29 IMAVLAAGS-ALATRRLSLAPGRLQSVLELVVTTIDAQIRDTMQTDPAPYRALIGTLFLFVLVANWSSLVPGVEPPTAHL 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 113 VMTFGLSLSIIIAVTISGFISfklnflsilmpGGVPLALA------PVLVLIETMSYMIRAISLGVRLAANISAGHLLFA 186
Cdd:PRK13421 108 ETDAALALIVFLATIYYGVRA-----------RGVRGYLAtfaeptWVMIPLNLVEQLTRTFSLIVRLFGNVMSGVFVIG 176

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 170676850 187 IISGFAfnmmvnGLMVlsffPILILVfitlLEIMVAVIQAYVFCLLTTIYLG 238
Cdd:PRK13421 177 IVLSLA------GLLV----PIPLMA----LDLLTGAVQAYIFAVLAMVFIG 214
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 89-237 4.62e-09

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 54.60  E-value: 4.62e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  89 LFLFIAMLNILGLFPYVFTPTAHLvmTFGLSLSIIIAVTISGFISFKLNFLSILMPGGVPLALAP-VLVLIETMSYMIRA 167
Cdd:MTH00087  58 TFIVLLLFCFGGLFPYSFSPCGMV--EFTFLYALVAWLSTFLSFLSKSEKFSVYLSKGSDSFLKTfSMLFVEIVSELSRP 135

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 168 ISLGVRLAANISAGHLlfaiisgfafnmMVNGLMVLSFFPILILVFITLLEIMVAVIQAYVFCLLTTIYL 237
Cdd:MTH00087 136 LALTLRLTVNLMVGHL------------ISSLLNFLGEKYVWLSILAIMMECFVAFIQSYIFSRLIYLYL 193
atpI CHL00046
ATP synthase CF0 A subunit
 33-238 2.80e-04

ATP synthase CF0 A subunit


Pssm-ID: 176987  Cd Length: 228  Bit Score: 41.07  E-value: 2.80e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850  33 MMMVLAVTAIWLLL-----RGDRLIPSRWQSIMELIHSNMRSVVQDNLGQKG-QKYFPFILCLFLFIAMLNILG-LFPY- 104
Cdd:CHL00046  26 LITSWVVIAILLGSallatRNLQTIPTGGQNFFEYVLEFIRDLAKTQIGEEEyRPWVPFIGTMFLFIFVSNWSGaLLPWk 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 170676850 105 --------VFTPTAHLVMTFGLSLSIIIAVTISGFISFKLNFLS-ILMPggvplalAPVLVLIETMSYMIRAISLGVRLA 175
Cdd:CHL00046 106 lielphgeLAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFGkYIQP-------TPILLPINILEDFTKPLSLSFRLF 178

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 170676850 176 ANISAGHLLFAIISgfafnmmvnglmvlSFFPILILVFITLLEIMVAVIQAYVFCLLTTIYLG 238
Cdd:CHL00046 179 GNILADELVVAVLV--------------SLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIG 227
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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