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Conserved domains on  [gi|189095625|ref|YP_001936209|]
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ATP synthase F0 subunit 8 (mitochondrion) [Keratoisidinae sp. BAL208-1]

Protein Classification

ATP synthase subunit B family protein( domain architecture ID 10009529)

ATP synthase subunit B family protein such as subunits b and b' from the F(o) complex in F-type ATP synthase (FoF1-ATPase) found in chloroplasts and in bacterial plasma membranes; the b subunits are part of the peripheral stalk that links the F(1) and F(o) complexes together, and which acts as a stator to prevent certain subunits from rotating with the central rotary element

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP8 MTH00025
ATP synthase F0 subunit 8; Validated
 1-70 1.53e-29

ATP synthase F0 subunit 8; Validated


:

Pssm-ID: 214404  Cd Length: 70  Bit Score: 99.37  E-value: 1.53e-29
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095625  1 MPHLDITAYLTQYSWTLIILLALYSIMSLYILPKIQNNLRIRSILQEEGAAPSKGLGVNRAYTILQDILH 70
Cdd:MTH00025  1 MPQLDTTTYLTQYRWTLIVLFLLLFFLVFFVLPTIKRNWLIRKSLMKKGAAFSKGLGLNKEVVFIWDWLL 70
 
Name Accession Description Interval E-value
ATP8 MTH00025
ATP synthase F0 subunit 8; Validated
 1-70 1.53e-29

ATP synthase F0 subunit 8; Validated


Pssm-ID: 214404  Cd Length: 70  Bit Score: 99.37  E-value: 1.53e-29
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095625  1 MPHLDITAYLTQYSWTLIILLALYSIMSLYILPKIQNNLRIRSILQEEGAAPSKGLGVNRAYTILQDILH 70
Cdd:MTH00025  1 MPQLDTTTYLTQYRWTLIVLFLLLFFLVFFVLPTIKRNWLIRKSLMKKGAAFSKGLGLNKEVVFIWDWLL 70
 
Name Accession Description Interval E-value
ATP8 MTH00025
ATP synthase F0 subunit 8; Validated
 1-70 1.53e-29

ATP synthase F0 subunit 8; Validated


Pssm-ID: 214404  Cd Length: 70  Bit Score: 99.37  E-value: 1.53e-29
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095625  1 MPHLDITAYLTQYSWTLIILLALYSIMSLYILPKIQNNLRIRSILQEEGAAPSKGLGVNRAYTILQDILH 70
Cdd:MTH00025  1 MPQLDTTTYLTQYRWTLIVLFLLLFFLVFFVLPTIKRNWLIRKSLMKKGAAFSKGLGLNKEVVFIWDWLL 70
ATP8 MTH00169
ATP synthase F0 subunit 8; Provisional
 1-43 1.51e-12

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 214446  Cd Length: 67  Bit Score: 56.14  E-value: 1.51e-12
                        10        20        30        40
                ....*....|....*....|....*....|....*....|...
gi 189095625  1 MPHLDITAYLTQYSWTLIILLALYSIMSLYILPKIQNNLRIRS 43
Cdd:MTH00169  1 MPQLDSVTYLTQYIWTLIILFFLFSLLVNYILPKIQQQLVIRT 43
PRK13454 PRK13454
F0F1 ATP synthase subunit B'; Provisional
 1-47 6.43e-05

F0F1 ATP synthase subunit B'; Provisional


Pssm-ID: 184061 [Multi-domain]  Cd Length: 181  Bit Score: 38.27  E-value: 6.43e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 189095625   1 MPHLDITAYLTQYSWTLIILLALYSIMSLYILPkiqnnlRIRSILQE 47
Cdd:PRK13454  22 MPQLDFSTFPNQIFWLLVTLVAIYFVLTRVALP------RIGAVLAE 62
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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