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Conserved domains on  [gi|194277537|ref|YP_002004588|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Propithecus coquereli]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009567)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 6.58e-68

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 199.40  E-value: 6.58e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537   1 MNLSLTLMIDIFLALLLVVIAFWLPQLNVYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 194277537  81 TINLNLMLTVALLLISILAAGLAYEWSQKGLEWEE 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 6.58e-68

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 199.40  E-value: 6.58e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537   1 MNLSLTLMIDIFLALLLVVIAFWLPQLNVYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 194277537  81 TINLNLMLTVALLLISILAAGLAYEWSQKGLEWEE 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 3.55e-29

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 100.96  E-value: 3.55e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537   18 VVIAFWLPQLNVYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTINLNLM-LTVALLLIS 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 194277537   97 ILAAGLAYEWSQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 11-113 1.45e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 84.79  E-value: 1.45e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537  11 IFLALLLVVIAFWLPQLNVYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTINLNLM-LT 89
Cdd:COG0838   16 LGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRELGWFgLI 93

                         90       100
                 ....*....|....*....|....
gi 194277537  90 VALLLISILAAGLAYEWSQKGLEW 113
Cdd:COG0838   94 EMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 6.58e-68

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 199.40  E-value: 6.58e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537   1 MNLSLTLMIDIFLALLLVVIAFWLPQLNVYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 194277537  81 TINLNLMLTVALLLISILAAGLAYEWSQKGLEWEE 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 9.18e-45

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 141.21  E-value: 9.18e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537   1 MNLSLT-LMIDIFLALLLVVIAFWLPQLNVYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79
Cdd:MTH00136   1 MNLITTiLTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 194277537  80 QTINLNLMLTVALLLISILAAGLAYEWSQKGLEWEE 115
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 5-115 1.05e-42

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 135.89  E-value: 1.05e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537   5 LTLMIDIFLALLLVVIAFWLPQLNVYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTINL 84
Cdd:MTH00069   4 LMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLNTP 83

                         90       100       110
                 ....*....|....*....|....*....|.
gi 194277537  85 NLMLTVALLLISILAAGLAYEWSQKGLEWEE 115
Cdd:MTH00069  84 TNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-113 2.28e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 132.31  E-value: 2.28e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537   1 MNLSLTLMIDIFLALLLVVIAFWLPQLNVYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 194277537  81 TINLNLMLTVALLLISILAAGLAYEWSQKGLEW 113
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 1.07e-36

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 120.47  E-value: 1.07e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537   1 MNLSLTLMIDIFLALLLVVIAFWLPQLNVYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00042   2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 194277537  81 TINLNLMLTVALLLISILAAGLAYEWSQKGLEWEE 115
Cdd:MTH00042  82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 3-113 4.89e-30

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 103.44  E-value: 4.89e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537   3 LSLTLMIDIFLALLLVVIAFWLPQLNVYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTI 82
Cdd:MTH00203   4 IMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLS 83

                         90       100       110
                 ....*....|....*....|....*....|.
gi 194277537  83 NLNLMLtvALLLISILAAGLAYEWSQKGLEW 113
Cdd:MTH00203  84 SLSLLL--AFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 3.55e-29

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 100.96  E-value: 3.55e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537   18 VVIAFWLPQLNVYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTINLNLM-LTVALLLIS 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 194277537   97 ILAAGLAYEWSQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-115 3.49e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 91.46  E-value: 3.49e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537   1 MNLSLTLMIDIFLALLLVVIAFWLPQLNVY-TEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79
Cdd:MTH00148   2 LSILLSLLFALILSPVLLLLGLVLSKRSYSdREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 194277537  80 QTINLNLMLTVALLLISILAAGLAYEWSQKGLEWEE 115
Cdd:MTH00148  82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 2-113 1.75e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 89.45  E-value: 1.75e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537   2 NLSLTLMIDIFLALLLVVIAFWL-PQLNVYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 194277537  81 TINLNLMLTVALLLISILAAGLAYEWSQKGLEW 113
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 11-113 1.45e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 84.79  E-value: 1.45e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537  11 IFLALLLVVIAFWLPQLNVYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTINLNLM-LT 89
Cdd:COG0838   16 LGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRELGWFgLI 93

                         90       100
                 ....*....|....*....|....
gi 194277537  90 VALLLISILAAGLAYEWSQKGLEW 113
Cdd:COG0838   94 EMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-113 2.54e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 84.27  E-value: 2.54e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537   1 MNLSLTLMIDIFLALLLVVIAFWLPQLNVYT-EKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79
Cdd:MTH00202   2 LLILFMSILSILISSLLFLVSWMLSFRSLMDrEKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVL 81

                         90       100       110
                 ....*....|....*....|....*....|....
gi 194277537  80 QTINLNLMLTVALLLISILAAGLAYEWSQKGLEW 113
Cdd:MTH00202  82 KSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 1-114 3.30e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 83.99  E-value: 3.30e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537   1 MNLSLTLMIDIFLALLLVVIAFWLPQLNVYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00055   6 LGIFILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYN 85

                         90       100       110
                 ....*....|....*....|....*....|....
gi 194277537  81 TINLNLMLTVALLLIsILAAGLAYEWSQKGLEWE 114
Cdd:MTH00055  86 QIGLFGFWVMYLFLI-ILTIGLIYEWVKGGLEWE 118
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 4-113 6.84e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 77.98  E-value: 6.84e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537   4 SLTLMIDIFLALLLVVIAFWLPQLNVYT-EKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTI 82
Cdd:MTH00012   5 MIPMMISLILPPLVLGAAWVLAARSTADrEKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTS 84

                         90       100       110
                 ....*....|....*....|....*....|.
gi 194277537  83 NLNLMLTVALLLISILAAGLAYEWSQKGLEW 113
Cdd:MTH00012  85 TSKTVVYTSILFLLILVIGLIHEWREGSLDW 115
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 7-114 1.97e-19

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 76.83  E-value: 1.97e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537   7 LMIDIFLALLLVVIAFWLPQLNVYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTINLnL 86
Cdd:PRK06602  15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGW-L 93

                         90       100
                 ....*....|....*....|....*...
gi 194277537  87 MLTVALLLISILAAGLAYEWSQKGLEWE 114
Cdd:PRK06602  94 GFVEAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 1-114 1.46e-18

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 74.33  E-value: 1.46e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537   1 MNLSLTLMIDIFLALLLVVIAFWLPQLNVYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00018   1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 194277537  81 TINLNLMLTVALLLIsILAAGLAYEWSQKGLEWE 114
Cdd:MTH00018  81 QIAPFGFWTMVGFLF-ILTLGLIYEWIKGGLEWE 113
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 8-114 1.33e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 69.96  E-value: 1.33e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537   8 MIDIFLALLLVVIAFWLPQLNVY-----TEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTI 82
Cdd:MTH00030  13 LLGVGIILLLVSISFTLGNSRIGltkpdSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQL 92

                         90       100       110
                 ....*....|....*....|....*....|..
gi 194277537  83 NLNLMLTVALLLIsILAAGLAYEWSQKGLEWE 114
Cdd:MTH00030  93 NLFSFWIVYTFLI-VLAIGLAYEWIKGGLEWD 123
ndhC CHL00022
NADH dehydrogenase subunit 3
 10-113 3.49e-12

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 58.07  E-value: 3.49e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537  10 DIFLALLLV-----VIAFWLPQL----NVYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQ 80
Cdd:CHL00022   8 DIFWAFLIIsslipILAFLISGLlapiSKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMS 85

                         90       100       110
                 ....*....|....*....|....*....|....
gi 194277537  81 TINLNLMLTV-ALLLISILAAGLAYEWSQKGLEW 113
Cdd:CHL00022  86 FDVLGVSAFIeALIFVLILIVGLVYAWRKGALEW 119
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 33-114 4.71e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 52.75  E-value: 4.71e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537  33 KYSSYECGFDPMESARLP--FSMKFFLVAITFLLFDLEIALLLPlpWASQTINLNLMLTVALLL-ISILAAGLAYEWSQK 109
Cdd:PRK07928  37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVFGLVEMALfMLTVFVAYAYVWRRG 114


                 ....*
gi 194277537 110 GLEWE 114
Cdd:PRK07928 115 GLEWD 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
7-113 7.61e-10

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 52.44  E-value: 7.61e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537   7 LMIDIFLALLLVVIAFWLPQLNVYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTINLNL 86
Cdd:PRK07756  16 LLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFL--YPWAVAYDKLGL 93

                         90       100
                 ....*....|....*....|....*...
gi 194277537  87 MLTVALLL-ISILAAGLAYEWSQKGLEW 113
Cdd:PRK07756  94 FALIEMLIfVVMLLVGLAYAWKKKVLQW 121
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-73 1.91e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 42.96  E-value: 1.91e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 194277537   1 MNLSLTLMIDIFLALLLVVIAFWLPQLNVYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLL 73
Cdd:MTH00092   2 LVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
33-114 3.23e-06

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 42.73  E-value: 3.23e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537  33 KYSSYECGFDPMESARlPFSMKFFLVAITFLLFDLEIALLlpLPWASQTINLNLM-LTVALLLISILAAGLAYEWSQKGL 111
Cdd:PRK08489  47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFKLLGLFgLIEMLLFIVLLTIGFIYAWKKGAL 123


                 ...
gi 194277537 112 EWE 114
Cdd:PRK08489 124 EWQ 126
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 11-76 3.89e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.18  E-value: 3.89e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 194277537  11 IFLALLLVVIAFWLPQLN-----VYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060  10 VFFLLFLVIYFFHSGLWNnkiysGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
PRK06073 PRK06073
NADH dehydrogenase subunit A; Validated
 3-104 1.69e-03

NADH dehydrogenase subunit A; Validated


Pssm-ID: 235690  Cd Length: 124  Bit Score: 35.35  E-value: 1.69e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194277537   3 LSLTLMIDIFLALLLVVIAFWLPQLNVYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTI 82
Cdd:PRK06073  10 FGLVIVLGLAAGVGTYKLLKLILPSKPTPLKVSRYEAGNPPTGPAKLWLPMQYYGYLLLFLTLEPIVVLLLLIAFAPYYT 89

                         90       100
                 ....*....|....*....|..
gi 194277537  83 NLNLMLTVALLLIsILAAGLAY 104
Cdd:PRK06073  90 FRDLLLLIVVALV-LMYPVLYY 110
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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