|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-347 |
0e+00 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 603.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 1 MNPYILATLLFGLGLGTTITFASSHWLLAWMGLEMNTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 81 TGQWDIQQMSHPLPITIITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALILQIQPANPTTMIALGLMS 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPTNPTLLITLGLTS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 161 TLVGGWGGLNQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALLTYFIMTFSTFLVFKLNNSTNINTLATSWAKSPALT 240
Cdd:MTH00135 161 TLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 241 ALMPLILLSLGGLPPMTGFAPKWLILQELTKQGLAPTATLAALTALLSLYFYLRLSYAMTLTMSPNNLTNTMPWRLPLLQ 320
Cdd:MTH00135 241 ALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPSTQ 320
|
330 340
....*....|....*....|....*..
gi 288904149 321 HTMPLALSTMATISLLPLTPAATALLT 347
Cdd:MTH00135 321 LTLPLAISTTATLMLLPLTPAILALLT 347
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
5.49e-146 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 415.86 E-value: 5.49e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 1 MNPYILATLLFGLGLGTTITFASSHWLLAWMGLEMNTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 81 TGQWDIQQMSHPLPITIITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALILQIQPA-NPTTMIALGLM 159
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLlNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALLTYFIMTFSTFLVFKLNNSTNINTLATSWAKSPAL 239
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 240 TALMPLILLSLGGLPPMTGFAPKWLILQELTKQGLAPTATLAALTALLSLYFYLRLSYAMTLTMSPNNLTNTMPWRLPlL 319
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFK-N 319
|
330 340
....*....|....*....|....*..
gi 288904149 320 QHTMPLALSTMATISLLPLTPAATALL 346
Cdd:MTH00070 320 KTNNLLSLTIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-340 |
2.70e-131 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 378.40 E-value: 2.70e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 1 MNPYILATLLFGLGLGTTITFASSHWLLAWMGLEMNTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 81 TGQWDIQQMSHPLPITIITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALILQIQPA-NPTTMIALGLM 159
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSlNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALLTYFIMTFSTFLVFKLNNSTNINTLATSWAKSPAL 239
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 240 TALMPLILLSLGGLPPMTGFAPKWLILQELTKQGLAPTATLAALTALLSLYFYLRLSYAMTLTMSPNNLTNTMPWRLPLL 319
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|.
gi 288904149 320 QHTmPLALSTMATISLLPLTP 340
Cdd:MTH00112 321 KNT-LTATLTTLSTLLLPLSP 340
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
1.27e-126 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 366.86 E-value: 1.27e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 1 MNPYILATLLFGLGLGTTITFASSHWLLAWMGLEMNTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 81 TGQWDIQQMSHPLPITIITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALILQIQPA-NPTTMIALGLM 159
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSiNPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALLTYFIMTFSTFLVFKLNNSTNINTLATSWAKSPAL 239
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 240 TALMPLILLSLGGLPPMTGFAPKWLILQELTKQGLAPTATLAALTALLSLYFYLRLSYAMTLTMSPNNLTNTMPWRLPLL 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....*.
gi 288904149 320 QHTMPLALSTMATISLLPLTPAATAL 345
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-347 |
3.67e-116 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 340.02 E-value: 3.67e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 1 MNPYILATLLFGLGLGTTITFASSHWLLAWMGLEMNTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 81 TGQWDIQQMSHPLPITIITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALILQIQPA-NPTTMIALGLM 159
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPAlNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALLTYFIMTFSTFLVFKLNNSTNINTLATSWAKSPAL 239
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 240 TALMPLILLSLGGLPPMTGFAPKWLILQELTKQGLAPTATLAALTALLSLYFYLRLSYAMTLTMSPNNLTNTMPWRLPLL 319
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*...
gi 288904149 320 QHtMPLALSTMATISLLPLTPAATALLT 347
Cdd:MTH00200 321 SN-LLVGLLLLLSILGLPLTPQLLFLFF 347
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-340 |
1.92e-93 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 282.20 E-value: 1.92e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 1 MNPYILATLLFGLGLGTTITFASSHWLLAWMGLEMNTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 81 TGQWDIQQMSHPLPITIITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALILQI-QPANPTTMIALGLM 159
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISIsNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALLTYFIMTFSTFLVFKLNNSTNINTLATSWAKSPAL 239
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 240 TALMPLILLSLGGLPPMTGFAPKWLILQELTKQGLAPTATLAALTALLSLYFYLRLSYAMTLTMSPNNLTNTMPWRLPLL 319
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330 340
....*....|....*....|.
gi 288904149 320 QHTMPLALSTMATISLLPLTP 340
Cdd:MTH00041 321 ITVYGVILSILSSISILGLLL 341
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-338 |
1.40e-64 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 207.75 E-value: 1.40e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 1 MNPYILATLLFGLGLGTTITFASSHWLLAWMGLEMNTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 81 TGqwdiqqMSHPLPITIITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALILQIQpaNPTTMIALGLMS 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLI--NNNFIIIIIILS 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 161 TLVGGWGGLNQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALLTYFIMTFSTFLVFKLNNSTNINTLATSWAKSPALT 240
Cdd:MTH00160 154 AIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIK 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 241 ALMPLILLSLGGLPPMTGFAPKWLILQELTKQGLAPTATLAALTALLSLYFYLRLSYAMTLTMSPNNLTNTMpwrlpLLQ 320
Cdd:MTH00160 234 FLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLK-----KKK 308
|
330
....*....|....*...
gi 288904149 321 HTMPLALSTMATISLLPL 338
Cdd:MTH00160 309 NKFSLILNFLSFISLFGL 326
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
10-319 |
8.00e-58 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 190.10 E-value: 8.00e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 10 LFGLGLGTTITFASSHWLLAWMGLEMNTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDIqqm 89
Cdd:MTH00144 10 LFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFS--- 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 90 shplpITIITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALILQIQPANP--TTMIALGLMSTLVGGWG 167
Cdd:MTH00144 87 -----MSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWlaYLLCVISVLSALVGSIG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 168 GLNQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALLTYFIMTFSTFLVFKLNNSTNINTLaTSWAKSPALTALMPLIL 247
Cdd:MTH00144 162 GLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDL-GSLKPSYKTGLSIISLL 240
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 288904149 248 LSLGGLPPMTGFAPKWLILQELTKQGLAPTATLAALTALLSLYFYLRLSYAMTLTMSPNNLTNTMPWRLPLL 319
Cdd:MTH00144 241 LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKVLNSSI 312
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
15-304 |
1.86e-49 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 168.42 E-value: 1.86e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 15 LGTTITFASSHWLLAWMGLEMNTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTnawltgQWDIQQMSHPLP 94
Cdd:MTH00011 17 LGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM------MWSFPSLLKNIT 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 95 ITIITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALILQIQPANPTTMI-ALGLMSTLVGGWGGLNQTQ 173
Cdd:MTH00011 91 ALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMtSMAAMSALAGGLGGMNQTQ 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 174 LRKILAYSSIAHLGWMILIIQFNPALTLLALLTYFIMTFSTFLVFKLNNSTNINTLATSWAKSPALTALMPLILLSLGGL 253
Cdd:MTH00011 171 LRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSLGGL 250
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 288904149 254 PPMTGFAPKWLILQELTKQGLAPTATLAALTALLSLYFYLRLSYAMTLTMS 304
Cdd:MTH00011 251 PPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSP 301
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
9-332 |
6.28e-46 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 159.07 E-value: 6.28e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 9 LLFGLGLGTTITFASSHWLLAWMGLEMNTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILF---ASTTNAWLTgqwd 85
Cdd:MTH00197 3 FLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMggsLSFSNLYLS---- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 86 iqqmshPLPITIITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFaLILQIQPANPTTMIALGLMSTLVGG 165
Cdd:MTH00197 79 ------LLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPL-LILAFNSSSFMGLLICSVLSSLIGG 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 166 WGGLNQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALLTYFIMTFSTFLVFKLNNSTNINTLATSWAKSPALTALMPL 245
Cdd:MTH00197 152 IGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGL 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 246 ILLSLGGLPPMTGFAPKWLILQELTKQGLAPTATLAALTALLSLYFYLRLSYA---MTLTMSPNNLTNTMPWRLPLLQHT 322
Cdd:MTH00197 232 SFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKsliLSNWMINFLMKINLLYSGLFILLM 311
|
330
....*....|
gi 288904149 323 MPLALSTMAT 332
Cdd:MTH00197 312 MMLPLLMIFT 321
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
15-295 |
6.67e-30 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 117.44 E-value: 6.67e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 15 LGTTITFASSHWLLAWMGLEMNTLAIIPLMAQHHHP-RAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDIQ------ 87
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSgYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSyinlvl 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 88 -------QMSHPLPITIITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALILQIQPANPTTMIAlGLMS 160
Cdd:MTH00196 84 nsgqsfsSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVNILLIG-GLFS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 161 TLVGGWGGLNQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALLTYF-------IMTFSTFLVFKLNNSTNINTLATSw 233
Cdd:MTH00196 163 LFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLfiyiimsICVFSIILALNVYKNLIIEFSGLS- 241
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 288904149 234 AKSPALTALMPLILLSLGGLPPMTGFAPKWLILQELTKQGLAPTATLAALTALLSLYFYLRL 295
Cdd:MTH00196 242 RRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
4-299 |
3.35e-28 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 114.06 E-value: 3.35e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 4 YILatLLFGLgLGTTITFASSHWLLAWMGLEMNTLAIIPLMA-QHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTG 82
Cdd:COG1007 105 YAL--LLFAT-LGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATG 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 83 QWDIQQMSHPLP------------ITIITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALILQI----- 145
Cdd:COG1007 182 SLNLAGIAAALAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLlveaf 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 146 ---QPANPTTMIALGLMSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALL----TYFIMTFSTFLVF 218
Cdd:COG1007 262 pglAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALfyllAYLFMNLGAFAVI 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 219 -----KLNNSTNINTLATSWAKSPALTALMPLILLSLGGLPPMTGFAPKWLILQELTKQGLAPTATLAALTALLSLYFYL 293
Cdd:COG1007 342 lllsrKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYL 421
|
....*.
gi 288904149 294 RLSYAM 299
Cdd:COG1007 422 RVVKAM 427
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-267 |
2.88e-26 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 105.86 E-value: 2.88e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 23 SSHWLLAWMGLEMNTLAIIPLMA-QHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDIQQMSHPLPITI---- 97
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 98 -------ITLALALKIGLAPVHSWLPEVLQGLDLTTGLIL-STWQKLAPFALI---LQIQPANPTTMI---ALGLMSTLV 163
Cdd:pfam00361 81 llllfllILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGYGLIrrsLLYLPSSPFIQQillILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 164 GGWGGLNQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALLTYFI----MTFSTFLVFKL-----NNSTNINTLATSWA 234
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLthglFSAGLFLCAGSviyrrVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 288904149 235 KSPALTALMPLILLSLGGLPPMTGFAPKWLILQ 267
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-266 |
6.20e-26 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 107.80 E-value: 6.20e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 13 LGLGTTITFASSHWLLAWMGLEMNTLAIIPLMA-QHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDIQQMSH 91
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGINS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 92 PLPITI----ITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALILQIQPANPTTMIALGLmSTLVGGWG 167
Cdd:MTH00199 186 ILTGDVgkilITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLICAVL-SIIYGAIG 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 168 GLNQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALLTYFIM-------TFSTFLVFKLNNSTNINTLATSwAKSPALT 240
Cdd:MTH00199 265 ALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMIIyvimsicSFSIILSLKLTKGLIVEVSGLS-RKNPVIA 343
|
250 260
....*....|....*....|....*.
gi 288904149 241 ALMPLILLSLGGLPPMTGFAPKWLIL 266
Cdd:MTH00199 344 LTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
9-299 |
2.04e-23 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 100.67 E-value: 2.04e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 9 LLFGLgLGTTITFASSHWLLAWMGLEMNTLAIIPLMAQH-HHPRAVEATTKYFLTQATAAAMILF--------ASTTNAW 79
Cdd:PRK05777 109 VLFAL-LGMMVMVSANDLLTLFLGLELLSLPLYALAALRrDRRRSLEAAIKYFVLGALASGFLLYgmsllygaTGSLSFA 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 80 LTGQWDIQQMSHPLPITI----ITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALILQI--------QP 147
Cdd:PRK05777 188 GIAKALADGSGNSLLLLFglvfLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLlvvafgglSE 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 148 ANPTTMIALGLMSTLVGGWGGLNQTQLRKILAYSSIAHLGWMIL-IIQFNPALTLLA---LLTYFIMTFSTFLVF----- 218
Cdd:PRK05777 268 DWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVgLAAGTAEGYSAVlfyLLAYLFMTLGAFGVIsllrr 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 219 KLNNSTNINTLATSWAKSPALTALMPLILLSLGGLPPMTGFAPKWLILQELTKQGLAPTATLAALTALLSLYFYLRLSYA 298
Cdd:PRK05777 348 KGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVIKL 427
|
.
gi 288904149 299 M 299
Cdd:PRK05777 428 M 428
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
23-299 |
3.36e-21 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 94.24 E-value: 3.36e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 23 SSHWLLAWMGLEMNTLAIIPLMA-QHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQW---DIQQMSHPLPITII 98
Cdd:TIGR01770 121 SNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLnfeDLLLFLSNGMLNIS 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 99 TL---------ALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALILQI--------QPANPTTMIALGLMST 161
Cdd:TIGR01770 201 LLllgivlilvGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLflyilfgfSEAWQIFLAIIAFLSM 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 162 LVGGWGGLNQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALLTY-FIMTFSTFLVF---------KLNNSTNINTLAT 231
Cdd:TIGR01770 281 LIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYiFIYALMSLGAFgvlsllrsyKDEWIEYISDFAG 360
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 288904149 232 SWAKSPALTALMPLILLSLGGLPPMTGFAPKWLILQELTKQGLAPTATLAALTALLSLYFYLRLSYAM 299
Cdd:TIGR01770 361 LFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVVKVM 428
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
2-299 |
8.35e-20 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 89.82 E-value: 8.35e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 2 NPYILATLLFGLGLGTTITFASSHWLLAWMGLEMNTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLT 81
Cdd:COG0651 105 RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGAT 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 82 GQWDIQQMSHPLP----------ITIITLALALKIGLAPVHSWLPE-----------VLQGLDLTTGL--ILSTWQKLAP 138
Cdd:COG0651 185 GTLNMADLAARLAeldpglllaaFALLLVGFGIKAALFPLHFWLPDaypaapspvsaLLSGLLTKVGVyaILRVLTLLFG 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 139 FALILQIQPAnpttMIALGLMSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALLTYFIMT------- 211
Cdd:COG0651 265 ADPALFLGTL----LLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHalakall 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 212 -FSTFLVFKLNNSTNINTLATSWAKSPALTALMPLILLSLGGLPPMTGFAPKWLILQELTKQGLAPTATLAALTALLSLY 290
Cdd:COG0651 341 fLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLA 420
|
....*....
gi 288904149 291 FYLRLSYAM 299
Cdd:COG0651 421 YFVRIFGRA 429
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
9-266 |
8.13e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 78.36 E-value: 8.13e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 9 LLFGLGLGTTITFASSHWLLAWMGLEMNTLAIIPLMAQHHHPRAV---------EATTKYFLTQATAAAMILFASTTNAW 79
Cdd:MTH00198 193 LVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFG 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 80 LTGQ--------------WDIQQMSHPLPITIITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALILQI 145
Cdd:MTH00198 273 FTGNegmlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSL 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 146 QPANpTTMIALGLMSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILIIQFNP----ALTLLALLTYFIMTFSTFLVF--- 218
Cdd:MTH00198 353 VITS-KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTyeslQASWTYAVTYLVSALASFTVIctl 431
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 288904149 219 ---------------KLNNSTNINTLATSWAKS---PALTALMPLILLSLGGLPPMTGFAPKWLIL 266
Cdd:MTH00198 432 eefgtrtptsrqrdgSFGNYNLVRRLVDLTILSrgqPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-295 |
2.73e-15 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 76.58 E-value: 2.73e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 51 RAVEATTKYFLTQATAAAMILFASTtnaWLTGQ-------WDI------QQMSHPLPITI----ITLALALKIGLAPVHS 113
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGFS---WLYGLsggeielQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQ 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 114 WLPEVLQGLDLTTGLILSTWQKLAPFALILQI-----QPANPTTMIALGLMSTL---VGGWGGLNQTQLRKILAYSSIAH 185
Cdd:CHL00049 236 WTPDVYEGSPTPVVAFLSVTSKVAASALATRIfdipfYFSSNEWHLLLEILAILsmiLGNLIAITQTSMKRMLAYSSIGQ 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 186 LGW-MILIIQFNPALTLLALLTYFIM-------TFSTFLVFKLNNST-NINTLATSWAKSPALTALMPLILLSLGGLPPM 256
Cdd:CHL00049 316 IGYvIIGIIVGDSNDGYASMITYMLFyifmnlgTFACIVLFGLRTGTdNIRDYAGLYTKDPFLALSLALCLLSLGGIPPL 395
|
250 260 270
....*....|....*....|....*....|....*....
gi 288904149 257 TGFAPKWLILQELTKQGLAPTATLAALTALLSLYFYLRL 295
Cdd:CHL00049 396 AGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKI 434
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-259 |
1.15e-13 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 71.62 E-value: 1.15e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 50 PRAVEATTKYFLTQATAAAMILFASTTNAWLTG------QWDIQQMSHPLPITIITLALAL-----KIGLAPVHSWLPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGgstqlsAIALALITSPSLGLALALVFVIagiafKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 119 LQGLDLTTGLILSTWQKLAPFALILQIQPANPTTM--------IALGLMSTLVGGWGGLNQTQLRKILAYSSIAHLGW-M 189
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAGFALAIRLLVTAFPSFdeqwkllfTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFvM 316
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 288904149 190 ILII---QFNPALTLLALLTYFIMT---FSTFLVFKLNNSTN-INTLATSWAKSPALTALMPLILLSLGGLPPMTGF 259
Cdd:PRK02504 317 IGLVagtEAGYASMVFYLLAYLFMNlgaFACVILFSLRTGTDqISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGF 393
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
290-340 |
1.14e-10 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 56.11 E-value: 1.14e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 288904149 290 YFYLRLSYAMTLTMSPNNLTNTMPWRLPLLQHTMPLALSTMATISLLPLTP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLPTLTTLSILLLPLTP 51
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
44-299 |
1.38e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 62.30 E-value: 1.38e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 44 MAQHHHPRAVEATTKYFLTQATAAAMILFA--------STTN-----AWLTGQWDIQQMS---HPLPITIITLALAL--- 104
Cdd:PRK12667 154 AYYRDRGDAVEAAIKYALIGAVGTTLYFLAlaflyatfGTLNmadlsAKIRGLSFPLTGGlagNPPLALGVALALALwaf 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 105 --KIGLAPVHSWLPEV-----------LQGLDLTTG---------LILSTWQKLAPFALILQIqpanptTMIALGLMSTL 162
Cdd:PRK12667 234 tiKAAIFPNHFWLPDAhpaapspvsamLSGLVVNVGayaiirflyTIFGISPSLIDFRAALSP------ILIILGAVSAI 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 163 VGGWGGLNQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALLTYFI-------MTFSTFLVF-KLNNSTNINTLATSWA 234
Cdd:PRK12667 308 IGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIInhaiaksLLFLASGVFiHAAGTRDIDELAGLGR 387
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 288904149 235 KSPALTALMPLILLSLGGLPPMTGFAPKWLILQELTKQGLAPTATLAALTALLSLYFYLRLSYAM 299
Cdd:PRK12667 388 KMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSL 452
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-267 |
3.19e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 61.11 E-value: 3.19e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 50 PRAVEATTKYFLTQATAAAMILFASTTNAWLTGQ-WDIQQ-MSHPLPITI-------ITLALALKIGLAPVHSWLPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGtFDLLElLNLPLPFGVqtwlflaFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 120 QGLDLTTGLILSTWQKLAPFALILQIQPANP-------TTMIALGLMSTLVGGWGGLNQTQLRKILAYSSIAHLGWMIL- 191
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdaslyfaPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLg 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 192 IIQFNPALTLLALLTYFIMTFSTFLVFKL-------NNSTNINTLATSWAKSPALTALMPLILLSLGGLPPMTGFAPKWL 264
Cdd:TIGR01972 312 IFSFNELGISGAVFQMISHGLITAALFLLvgvlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
...
gi 288904149 265 ILQ 267
Cdd:TIGR01972 392 ILL 394
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-299 |
8.86e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 59.89 E-value: 8.86e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 33 LEMNTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDIQQMSHPLP--------ITIITLALAL 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAenptvvtaFGFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 105 KIGLAPVHSWLPEVLQGLDLTTGLILS-TWQKLAPFALI----------LQIQPANPTTMIALGLMSTLVGGWGGLNQTQ 173
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAAPPVVTALLSgLVTKVAVYALIriyftvfggdFRFALGLGWLLAVLALLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 174 LRKILAYSSIAHLGWMILIIQFNPALTLLALLTYF----IMTFSTFL----VFKLNNSTNINTLATSWAKSPALTALMPL 245
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLlhhaLMKGALFLaagaIEVTYGTRRLSELSGLGRRMPLTAAAFAV 374
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 288904149 246 ILLSLGGLPPMTGFAPKWLILQELTKQGLAPTATLAALTALLSLYFYLRLSYAM 299
Cdd:PRK08375 375 ASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRA 428
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-266 |
2.66e-08 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 55.09 E-value: 2.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 49 HPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQW--DIQQ-MSHPLPITI-------ITLALALKIGLAPVHSWLPE- 117
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAElAAAPLPLTAqlllflaFFIAFAVKVPMFPFHTWLPDa 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 118 ----------VLQGLDLTTG----------LILSTWQKLAPFalilqiqpanpttMIALGLMSTLVGGWGGLNQTQLRKI 177
Cdd:COG1008 236 hveaptagsvLLAGVLLKMGgygllrfalpLFPEASAYFAPL-------------LAALGVIGIIYGALVALAQTDLKRL 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 178 LAYSSIAHLGWMIL-IIQFNPALTLLALLTYFIMTFSTFLVFKL-------NNSTNINTLATSWAKSPALTALMPLILLS 249
Cdd:COG1008 303 IAYSSVSHMGFVLLgIFALNPLGLQGAVLQMVSHGLITAALFLLvgvlydrTHTRDIADLGGLAKRMPVLAALFLLAALA 382
|
250
....*....|....*..
gi 288904149 250 LGGLPPMTGFAPKWLIL 266
Cdd:COG1008 383 SLGLPGTSGFVGEFLVL 399
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-265 |
4.63e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 54.33 E-value: 4.63e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 33 LEMNTLAIIPLMAQHHH-PRAVEATTKYFLTQATAAAMILFASttnAWLTGQWDIQQMSH--------PLPITIITLA-- 101
Cdd:PRK08376 150 LEIMSIASYALVAFRNDtWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTLNMAYlavkmsenPTVVAKIALAlf 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 102 ---LALKIGLAPVHSWLPEVLQGL--DLTTGLILSTWQKL-APFALILQIQPA--NPTT----MIALGLMSTLVGGWGGL 169
Cdd:PRK08376 227 iagLAMKSGAVPVHMWLPDAYPAApsSISAMLLVIKQAGLyALARVLFSIYGPaiNLATvgwvIIILGCLTMFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 170 NQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALLTYFIMTFSTFLVFKLNNST--------------------NINTL 229
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMLLGLGVGLAALGDPAMASYGEIALAGGIYHIVNHAlykallfltagaviyetgtrNLNEL 386
|
250 260 270
....*....|....*....|....*....|....*.
gi 288904149 230 ATSWAKSPALTALMPLILLSLGGLPPMTGFAPKWLI 265
Cdd:PRK08376 387 GGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
8.15e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 50.50 E-value: 8.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 33 LEMNTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDIQQMS---HPLPIT--------IITLA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFliiQDLPTNraiqigvlFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 102 LALKIGLAPVHSWLPEVLQGLDLTTGLILS-TWQKLAPFALI-----------LQIQPANPTTMIALGLMSTLVGGWGGL 169
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEAPSFISVFFSgTSTKVMIYLIIrivydvfkanfVFTTLPFNNVFMILAALAIVFGSVLAI 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 170 NQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALLTYFI----MTFSTFLV-----FKLnNSTNINTLATSWAKSPALT 240
Cdd:PRK12662 299 LSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVnhsiVKSALFMVsgsisYHF-GTTKLEDCLNLWKSMPKIT 377
|
250 260
....*....|....*....|....*.
gi 288904149 241 ALMPLILLSLGGLPPMTGFAPKWLIL 266
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
54-329 |
1.08e-06 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 50.38 E-value: 1.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 54 EATTKYFLTQATAAAMILFASTTNAWLTGQWDIQ-------QMSHPLPITIITLALAL----KIGLAPVHSWLPEVLQGL 122
Cdd:PRK08668 147 KASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisqgliNDTSTGFALIVFLFLLAfgvaKAGIFPLHVWAPDAYSEA 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 123 DLTTGLILS-TWQKLAPFALILQIQ-----------------PANPTTMIALGLMSTLVGGWGGLNQTQLRKILAYSSIA 184
Cdd:PRK08668 227 PQSFSAVLSgQLSKLGAYGFLLVLYvlpgtklfsefgtyrgvPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVA 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 185 HLGWMILIIQFNPALTLLALLTYFI--MTFST--FLVFKL----NNSTNINTLATSWAKSPaLTALMPLI-LLSLGGLPP 255
Cdd:PRK08668 307 NGGYILVGLGLGTSLGFAGGLFHVFnhALFKGlfFLIFAAviyrTGTTKISEMGGLIEKMP-FTFAMYLVaIISLAGIPP 385
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 288904149 256 MTGFAPKWLILQELTKQGLAPTATLAALTALLSLYFYLRLSYAMTLTMSPNNLTNTMPWRLPLLQHTMPLALST 329
Cdd:PRK08668 386 MSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLAGVFLGQLPSDHKDVKEAPLPMLIPMAILVLLN 459
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
9-191 |
1.14e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 50.08 E-value: 1.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 9 LLFGLGLGTTITFASSHWLLAWMGLEMNTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDI-- 86
Cdd:PRK06473 112 LLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFdy 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 87 -QQMSHPLPITI-------ITLALALKIGLAPVHSWLPE-----------VLQG--LDLTT--------GLILSTWQKLA 137
Cdd:PRK06473 192 ePLRSHTLPLSTqllllapILVGFGIKIPLVPFHTWLPDahveastpvsvLLAGvlLKLGTygllrfgvGLFPEAWVYLA 271
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 288904149 138 PFalilqiqpanpttMIALGLMSTLVGGWGGLNQTQLRKILAYSSIAHLGWMIL 191
Cdd:PRK06473 272 PW-------------LATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILL 312
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-193 |
2.32e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 49.05 E-value: 2.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 50 PRAVEATTKYFL-TQATAAAM---ILFASTTNAWLTGQWDIQQ-MSHPLPITIITL-------ALALKIGLAPVHSWLPE 117
Cdd:PRK05846 157 KNRIYAATKFFLyTLLGSLLMlvaIIYLVVVYYNATGTFDIADlLNLPLPPGVQYWlflaffiAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 118 VLQ-----GLDLTTGLILstwqKLAPFALI---LQIQPANP----TTMIALGLMSTLVGGWGGLNQTQLRKILAYSSIAH 185
Cdd:PRK05846 237 AHVqaptaGSVLLAGILL----KMGAYGLLrfsLPLFPDAShefaPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
....*...
gi 288904149 186 LGWMILII 193
Cdd:PRK05846 313 MGFVTLGI 320
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
86-267 |
3.21e-06 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 48.79 E-value: 3.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 86 IQQMSHPLPITIIT----LALALKIGLAPVHsWLPEVLQGLDLT-TGLILSTWQKLAPFALI------LQIQPANPTTMI 154
Cdd:PRK12663 197 LNDMGDTATLTTIAllflLAFGMKAALFPFM-WLPAAYHTPNTEvAALFAALLTKVGIYALIrvftllFPQERELLHPLL 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 155 AL-GLMSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALLTYFI--MTFSTFLVF------KLNNSTN 225
Cdd:PRK12663 276 ATmAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVhdMVVKTALFLiagslvRLTGYRS 355
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 288904149 226 INTLATSWAKSPALTALMPLILLSLGGLPPMTGFAPKWLILQ 267
Cdd:PRK12663 356 LQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQ 397
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
28-267 |
3.47e-06 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 48.39 E-value: 3.47e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 28 LAWMGLEMNTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFAS----------TTNAWLTGQW-DIQQMSHPLPIT 96
Cdd:PRK06458 132 LMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTilvyanaatvMGDGEMAILWtELLKHASLLDPT 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 97 IITLALAL-------KIGLAPVHSWLPE-----------VLQGLDLTTGLILSTWQKLAPFALILQIQPanPTTMIALGL 158
Cdd:PRK06458 212 LMKLAFVFlligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALYAVLRYYILIDAAIGSDFP--GRLLLIFGL 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 159 MSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALLTYFIMT--------FSTFLVFKLNNSTNINTLA 230
Cdd:PRK06458 290 LSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHsltksaifFASGNVLQKYGTRDINVIR 369
|
250 260 270
....*....|....*....|....*....|....*..
gi 288904149 231 TSWAKSPALTALMPLILLSLGGLPPMTGFAPKWLILQ 267
Cdd:PRK06458 370 GLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
47-269 |
6.77e-06 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 47.84 E-value: 6.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 47 HHHPRAVEATTKYFLTQAT-----AAAMILFASTTNAW-LTG--QWDIQQMSHPLpITIITLALAL----KIGLAPVHSW 114
Cdd:COG1009 155 YEKPSARRAARKAFLVTRVgdlglLLGILLLGAIAGTLnFSEllAAAPTILSSPL-LTLILLLLLLgafgKSAQFPLHFW 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 115 LPEVLQG-----------LDLTTGLILstwqkLAPFALILQIQPANPTTMIALGLMSTLVGGWGGLNQTQLRKILAYSSI 183
Cdd:COG1009 234 LPDAMEGptpvsallhaaTMVKAGVYL-----LARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTV 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 184 AHLGWMILIIQFNpaltLLALLTYFIMTFSTF--LVF-------KLNNSTNINTLATSWAKSPALTALMPLILLSLGGLP 254
Cdd:COG1009 309 SQLGYMFLALGVG----AYVAALFHLLTHAFFkaLLFlgagsviHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIP 384
|
250
....*....|....*
gi 288904149 255 PMTGFAPKWLILQEL 269
Cdd:COG1009 385 PFAGFFSKEAILEAA 399
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
19-270 |
6.58e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 44.56 E-value: 6.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 19 ITFASSHWLLAWMGLEMNTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDIQ--QMSHPLPIT 96
Cdd:PRK07234 109 AAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSglATADPEAFA 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 97 IITLALALKIGLAPVHSWLPEVLQGLDLTTGLILS-TWQKLAPFAL----ILQIQPANPTTMIALGlmSTLVGGWGGLNQ 171
Cdd:PRK07234 189 LIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSgVVVKAGVFPLvrcaLDVPGLDLIVRIFGVG--TALLGVLFALLE 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 172 TQLRKILAYSSIAHLGWMILiiqfNPALTLLALLTYFIMTFSTFLVFKLNNSTNIntlaTSWAKSPALTAL-MPLIL--L 248
Cdd:PRK07234 267 KDLKRMLAFSTISQLGFILA----APLVGGLYALAHGLVKSTLFLCAGALPSRNF----TELISQMLGIGKwIPLTMasF 338
|
250 260
....*....|....*....|..
gi 288904149 249 SLGGLPPMTGFAPKWLILQELT 270
Cdd:PRK07234 339 SIAGFPLLAGFVSKVLTLKNLL 360
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
17-193 |
7.91e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 44.36 E-value: 7.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 17 TTITFASSHWLLAWMGLEMNTLAIIPLMAQHHHPRAVEATTKYFLTQATA------AAMILFASTTNAWLTGQWDIQQMS 90
Cdd:PRK08676 115 ITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNWTELA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 91 HPLPI----------TIITLALALKIGLAPVHSWLPE-----------VLQGLDLTTGLilstWQKLAPFALILQIQPAN 149
Cdd:PRK08676 195 AHASLlspsvlgasfLFIFIGFLAKSGLVPFHTWLPAayakapsvvsaLLSGTVLNIGI----YGILRLSALLRQSGAAE 270
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 288904149 150 PTT--MIALGLMSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILII 193
Cdd:PRK08676 271 QFSnvLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGI 316
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
98-187 |
1.33e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 43.76 E-value: 1.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 98 ITLALALKIGLAPVHSWLPEV-----LQGLDLTTGLILstwqKLAPFALILQIQPANP-------TTMIALGLMSTLVGG 165
Cdd:MTH00226 236 IFLAMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILL----KLGGYGLVRLSWPILPlgaqnlaPAVIAMGIVGIVYGS 311
|
90 100
....*....|....*....|..
gi 288904149 166 WGGLNQTQLRKILAYSSIAHLG 187
Cdd:MTH00226 312 FATCRQIDVKRLVAYSSVAHMG 333
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
152-262 |
1.47e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 43.76 E-value: 1.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 152 TMIALGLMSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALLTyfiMTF-------STFLVFK-LNNS 223
Cdd:PRK12644 269 TVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLA---MLLahalfkaALFLVVGiIDHS 345
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 288904149 224 T---NINTLATSWAKSPALTALMPLILLSLGGLPPMTGFAPK 262
Cdd:PRK12644 346 TgtrDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
151-267 |
2.46e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 42.65 E-value: 2.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 151 TTMIALGLMSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILIIQFNPALTLLALLTYFI--MTFST--FLVFKL----NN 222
Cdd:PRK12665 274 TLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAhhITVQTtlFLVVGLierqAG 353
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 288904149 223 STNINTLATSWAKSPALTALMPLILLSLGGLPPMTGFAPKWLILQ 267
Cdd:PRK12665 354 SSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-273 |
3.31e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 42.64 E-value: 3.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 111 VHSWLPEVLQGLDLTTGLILSTWQKLAPFALILQIQPANPTTMIAL------GLMSTLVGGWGGLNQTQLRKILAYSSIA 184
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLliitifGALTAFFAATVGLVQNDLKKVIAYSTCS 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 185 HLGWMILIIQFNPALTLLALLTYFIMTFSTFLVFKLN---NSTNIN-----TLATSWAKSPALTALMPLILLSLGGLPPM 256
Cdd:MTH00032 324 QLGYMVLIIGIEGSHNVGLFHLVNHAFFKALLFLSAGsviHSTTVDeqdmrKMGGLIHSIPFTYTMMLIGSFSIMGLPYL 403
|
170
....*....|....*..
gi 288904149 257 TGFAPKWLILqELTKQG 273
Cdd:MTH00032 404 TGFYSKDLIL-ELTYSG 419
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-191 |
3.47e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 42.39 E-value: 3.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 55 ATTKYFLTQATAAAMILFASTTNAWLTGQ----------WDIQQMSHPLPITIITLALALKIGLAPVHSWLPEVLQGLDL 124
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGStsfdydaistQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 288904149 125 TTGLILS-TWQKLAPFALI---LQIQP-----ANPTTMIaLGLMSTLVGGWGGLNQTQLRKILAYSSIAHLGWMIL 191
Cdd:PRK07363 238 AVAILLGgVLAKLGTYGLLrfgLQLFPqtwslVAPGLAI-IGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILV 312
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
112-267 |
5.31e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 41.99 E-value: 5.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 112 HSWLPEVLQGLDLTTGLILSTWQKLAPFALILQIQP---ANPTTMIA---LGLMSTLVGGWGGLNQTQLRKILAYSSIAH 185
Cdd:MTH00020 230 HTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPlfeQAPLALIIvtiVGSLTVFFAATVGLVQNDLKKVIAYSTCSQ 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 186 LGWMILIIQFNpaltLLALLTYFIMTFSTF--LVFkLNNSTNINTLA--TSWAKSPALTALMPLIL-------LSLGGLP 254
Cdd:MTH00020 310 LGYMVVACGLS----HYSISLFHLMNHAFFkaLLF-LSAGSVIHALSdeQDMRKMGGLISFLPLTYiffligsLSLMGFP 384
|
170
....*....|...
gi 288904149 255 PMTGFAPKWLILQ 267
Cdd:MTH00020 385 YLTGFYSKDLILE 397
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
51-267 |
3.29e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 39.24 E-value: 3.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 51 RAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDIQQMSHPLPIT----IITLALALKI-------GLAPVHSWLPEVL 119
Cdd:PRK06277 147 EAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNALLVNptspVIYGGLLLLIfgllygsGLPPFHTIKSDIY 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 120 QGLDLTTGLILSTWQKLAPFALILQIQ---------PANPTTMIALGLMSTLVGGWGGLNQTQLRKILAYSSIAHLGWMI 190
Cdd:PRK06277 227 AKAKPFGSALLQTFSKFVLVALMLVIFklfgglsyfPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVA 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 191 LII----QFNPALTLLALLTYFIMTFSTFL----VFKLNNSTNINTLATSWAKSPALTALMPLILLSLGGLPPMTGFAPK 262
Cdd:PRK06277 307 AGLalgtPLGIVAGIFHAINHVIYKSALFLgagiVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSK 386
|
....*
gi 288904149 263 WLILQ 267
Cdd:PRK06277 387 LMLAQ 391
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
97-271 |
3.43e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 38.70 E-value: 3.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 97 IITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALILQIQPANPTTMIALGLMSTLVGGWgglNQTQLRK 176
Cdd:MTH00091 62 FQFLILMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFFSKNFFFLLLFGLLICFFQMF---LLKSYKN 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 177 ILAYSSIAHLGWMILIIQFNPALTLLALLTYFIMTFstFLVFKLNNSTNINTLatSWakspaltaLMPLILLSlggLPPM 256
Cdd:MTH00091 139 LLILSSTESFNWLILSFFFSFFNVFFLFFYYFLLML--FLIPKFNNVNKLNFV--SW--------ETLLVFMN---LPFS 203
|
170
....*....|....*
gi 288904149 257 TGFAPKWLILQELTK 271
Cdd:MTH00091 204 VTFFVKIFSLSEILK 218
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
6-191 |
3.93e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 38.91 E-value: 3.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 6 LATLLFGLGlGTTITFASSHWLL---AWM--GLEMNTLaiipLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
Cdd:PRK08168 103 VRALAGVLA-AVHLLVLSDHLLVliaAWAaiSLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLE 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 81 TGQWDIQQ---------MSHPLPITIITLALA--LKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALI-----LQ 144
Cdd:PRK08168 178 VGSLSLSAlwahlaaqgASPSLQAAALLLVLAviLKTAQLPVHGWLIQVMEAPTPVSALLHAGVVNLGGFVLIrfaplLE 257
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 288904149 145 IQPANPTTMIALGLMSTLVGGWGGLNQTQLRKILAYSSIAHLGWMIL 191
Cdd:PRK08168 258 QAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
6-269 |
4.61e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.00 E-value: 4.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 6 LATLLFGLGLGTTITFASSHWLL---AWMGLEMNTLAIIPLMAQHHHPRAVEATTKYFLTqataaAMILFASTTNAWLTG 82
Cdd:PRK06459 74 LSSLYILTILGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRPAFVFMAFGELST-----VLILAGFAWAFIISG 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 83 QWDIQQMSHPLPITIITLALALKIGLAPVH--SWLPEVLQGLDLTTGLILSTWQKLAPFALILQIQPANPT--------T 152
Cdd:PRK06459 149 TTNFSYLPSPVPLILASFGFIIKMGMMPFLvsEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTipigyfglT 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 153 MIALGLMSTLVGGWGGLNQTQLRKILAYSSIAHLGWMI-----LIIQFNPALTLLALLTYFIMTFS------TFLVFKLN 221
Cdd:PRK06459 229 ILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILvalglYMVTKQLITSIEHFSLITVILYSfahsvaKTGLFLSS 308
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 288904149 222 NSTNINTLATSWAKSPALTALMPLIL-LSLGGLPPMTGFAPKWLILQEL 269
Cdd:PRK06459 309 GLQEKQSITYSKKIRNRWIELGLTLLaSSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-193 |
8.21e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 38.09 E-value: 8.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 55 ATTKYFLTQATAAAMILFASTTNAWLTGQ--WDIQQM---SHPLPITIIT-----LALALKIGLAPVHSWLPEVLQGLDL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELgakSYPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 125 TTGLILS-TWQKLAPFALI-----------LQIQPAnpttMIALGLMSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILI 192
Cdd:PRK12561 218 PVSMILAgVLLKMGGYALIrfnvqmlpdahVYFAPA----LAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLG 293
|
.
gi 288904149 193 I 193
Cdd:PRK12561 294 I 294
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
78-196 |
8.49e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 37.97 E-value: 8.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 78 AWL---TGQWDIQQM-----SHPLPITIITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALILQIQP-- 147
Cdd:MTH00066 185 AWLamnTNSWELQQIfllndNSTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPll 264
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 288904149 148 -ANP---TTMIALGLMSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILIIQFN 196
Cdd:MTH00066 265 eNNQtalTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLN 317
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
79-191 |
9.86e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 37.70 E-value: 9.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288904149 79 WLTGQWDIQQM---------SHPLPITIITLaLALKIGLAPV--------HSWLPEVLQGLDLTTGLILSTWQKLAPFAL 141
Cdd:PRK07376 198 WATGSFDFDGIadrlselvsSGAVSGWLALL-LCILVFLGPMaksaqfplHVWLPDAMEGPTPISALIHAATMVAAGVFL 276
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 288904149 142 ILQIQPAN---PTTM--IAL-GLMSTLVGGWGGLNQTQLRKILAYSSIAHLGWMIL 191
Cdd:PRK07376 277 VARMYPVFeqfPAVMtvIAWtGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVM 332
|
|
| |
