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Conserved domains on  [gi|331746964|ref|YP_004425110|]
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cytochrome b (mitochondrion) [Plecotus auritus]

Protein Classification

cytochrome b( domain architecture ID 11475898)

cytochrome b is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), a respiratory chain that generates an electrochemical potential coupled to ATP synthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-379 0e+00

cytochrome b; Provisional


:

Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 752.24  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   1 MTNIRKSHPLMKIINDSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLR 80
Cdd:MTH00100   1 MTNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  81 YLHANGASMFFICLYLHIGRGLYYGSYMYTETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDL 160
Cdd:MTH00100  81 YLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 161 VEWIWGGFSVDKATLTRFFAFHFLFPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLAMITSLL 240
Cdd:MTH00100 161 VEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLM 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 241 ALVLFSPDMLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLIIIPLLHTSKQRSMTFRPL 320
Cdd:MTH00100 241 LLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPL 320

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 331746964 321 SQCMFWLLVADLLTLTWIGGQPVEHPYIIIGQLASILYFLIITALMPLTSLLENHLLKW 379
Cdd:MTH00100 321 SQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-379 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 752.24  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   1 MTNIRKSHPLMKIINDSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLR 80
Cdd:MTH00100   1 MTNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  81 YLHANGASMFFICLYLHIGRGLYYGSYMYTETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDL 160
Cdd:MTH00100  81 YLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 161 VEWIWGGFSVDKATLTRFFAFHFLFPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLAMITSLL 240
Cdd:MTH00100 161 VEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLM 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 241 ALVLFSPDMLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLIIIPLLHTSKQRSMTFRPL 320
Cdd:MTH00100 241 LLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPL 320

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 331746964 321 SQCMFWLLVADLLTLTWIGGQPVEHPYIIIGQLASILYFLIITALMPLTSLLENHLLKW 379
Cdd:MTH00100 321 SQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-373 2.54e-122

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 358.72  E-value: 2.54e-122
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   1 MTNIRKSHPLMKIIND---------SFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICR 71
Cdd:COG1290    1 MSTTKKASGLADWLDErlplaslvrEHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  72 DVNYGWVLRYLHANGASMFFICLYLHIGRGLYYGSYMYTE--TWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNL 149
Cdd:COG1290   81 DVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 150 LSAIPYIGTDLVEWIWGGFSVDKATLTRFFAF-HFLFPFIISAMVMVHLLFLHETGSNNPTGI----PSNMDMIPFHPYY 224
Cdd:COG1290  161 FGAIPVIGTWLVTWLFGGEFPGDATLNRFFALhVLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYY 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 225 TIKDILGLLAMITSLLALVLFSPDmlGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALVLSILVLI 302
Cdd:COG1290  241 TVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLF 318

                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 331746964 303 IIPLLHTSKQRSMTFRPLSQCMFWLLVADLLTLTWIGGQPVehPYIIIGQLASILYFLIITALMPLTSLLE 373
Cdd:COG1290  319 LLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 9-206 1.05e-90

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 271.16  E-value: 1.05e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   9 PLMKIINDSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLRYLHANGAS 88
Cdd:cd00284    1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  89 MFFICLYLHIGRGLYYGSYMYT--ETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWG 166
Cdd:cd00284   81 MFFLMLYLHIFRGLYYGSYKKPreLTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 331746964 167 GFSVDKATLTRFFAFHFLFPFIISAMVMVHLLFLHETGSN 206
Cdd:cd00284  161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
18-204 6.52e-82

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 248.07  E-value: 6.52e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   18 FIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLRYLHANGASMFFICLYLH 97
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   98 IGRGLYYGSYMYT--ETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATL 175
Cdd:pfam00033  81 IFRGLYYGGFSYPreLTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 331746964  176 TRFFAFHFLFPFIISAMVMVHLLFLHETG 204
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 229-293 5.21e-09

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 54.80  E-value: 5.21e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 331746964  229 ILGLLAMITSLLALvlfSPDMLGDPdnyspANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLA 293
Cdd:TIGR01156  44 ILGTIACVVGLAVL---DPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLL 100
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-379 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 752.24  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   1 MTNIRKSHPLMKIINDSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLR 80
Cdd:MTH00100   1 MTNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  81 YLHANGASMFFICLYLHIGRGLYYGSYMYTETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDL 160
Cdd:MTH00100  81 YLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 161 VEWIWGGFSVDKATLTRFFAFHFLFPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLAMITSLL 240
Cdd:MTH00100 161 VEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLM 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 241 ALVLFSPDMLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLIIIPLLHTSKQRSMTFRPL 320
Cdd:MTH00100 241 LLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPL 320

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 331746964 321 SQCMFWLLVADLLTLTWIGGQPVEHPYIIIGQLASILYFLIITALMPLTSLLENHLLKW 379
Cdd:MTH00100 321 SQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
CYTB MTH00119
cytochrome b; Provisional
 1-379 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 672.00  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   1 MTNIRKSHPLMKIINDSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLR 80
Cdd:MTH00119   2 APNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIR 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  81 YLHANGASMFFICLYLHIGRGLYYGSYMYTETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDL 160
Cdd:MTH00119  82 NLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTL 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 161 VEWIWGGFSVDKATLTRFFAFHFLFPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLAMITSLL 240
Cdd:MTH00119 162 VEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLL 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 241 ALVLFSPDMLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLIIIPLLHTSKQRSMTFRPL 320
Cdd:MTH00119 242 TLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPL 321

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 331746964 321 SQCMFWLLVADLLTLTWIGGQPVEHPYIIIGQLASILYFLIITALMPLTSLLENHLLKW 379
Cdd:MTH00119 322 SQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
CYTB MTH00131
cytochrome b; Provisional
 1-379 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 664.04  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   1 MTNIRKSHPLMKIINDSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLR 80
Cdd:MTH00131   1 MASLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  81 YLHANGASMFFICLYLHIGRGLYYGSYMYTETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDL 160
Cdd:MTH00131  81 NLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 161 VEWIWGGFSVDKATLTRFFAFHFLFPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLAMITSLL 240
Cdd:MTH00131 161 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALT 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 241 ALVLFSPDMLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLIIIPLLHTSKQRSMTFRPL 320
Cdd:MTH00131 241 SLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPL 320

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 331746964 321 SQCMFWLLVADLLTLTWIGGQPVEHPYIIIGQLASILYFLIITALMPLTSLLENHLLKW 379
Cdd:MTH00131 321 TQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALEW 379
CYTB MTH00074
cytochrome b; Provisional
 1-379 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 652.13  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   1 MTNIRKSHPLMKIINDSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLR 80
Cdd:MTH00074   2 AHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMR 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  81 YLHANGASMFFICLYLHIGRGLYYGSYMYTETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDL 160
Cdd:MTH00074  82 NIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTL 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 161 VEWIWGGFSVDKATLTRFFAFHFLFPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLAMITSLL 240
Cdd:MTH00074 162 VQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALA 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 241 ALVLFSPDMLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLIIIPLLHTSKQRSMTFRPL 320
Cdd:MTH00074 242 LLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPL 321

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 331746964 321 SQCMFWLLVADLLTLTWIGGQPVEHPYIIIGQLASILYFLIITALMPLTSLLENHLLKW 379
Cdd:MTH00074 322 TQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLKW 380
CYTB MTH00191
cytochrome b; Provisional
 4-368 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 617.70  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   4 IRKSHPLMKIINDSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLRYLH 83
Cdd:MTH00191   1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  84 ANGASMFFICLYLHIGRGLYYGSYMYTETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEW 163
Cdd:MTH00191  81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 164 IWGGFSVDKATLTRFFAFHFLFPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLAMITSLLALV 243
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 244 LFSPDMLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLIIIPLLHTSKQRSMTFRPLSQC 323
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*
gi 331746964 324 MFWLLVADLLTLTWIGGQPVEHPYIIIGQLASILYFLIITALMPL 368
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
CYTB MTH00156
cytochrome b; Provisional
 11-362 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 590.22  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  11 MKIINDSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLRYLHANGASMF 90
Cdd:MTH00156   1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  91 FICLYLHIGRGLYYGSYMYTETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSV 170
Cdd:MTH00156  81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 171 DKATLTRFFAFHFLFPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLAMITSLLALVLFSPDML 250
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 251 GDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLIIIPLLHTSKQRSMTFRPLSQCMFWLLVA 330
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                        330       340       350
                 ....*....|....*....|....*....|..
gi 331746964 331 DLLTLTWIGGQPVEHPYIIIGQLASILYFLII 362
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYF 352
CYTB MTH00034
cytochrome b; Validated
 4-377 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 587.83  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   4 IRKSHPLMKIINDSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLRYLH 83
Cdd:MTH00034   4 LRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIH 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  84 ANGASMFFICLYLHIGRGLYYGSYMYTETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEW 163
Cdd:MTH00034  84 ANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQW 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 164 IWGGFSVDKATLTRFFAFHFLFPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLAMITSLLALV 243
Cdd:MTH00034 164 IWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLA 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 244 LFSPDMLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLIIIPLLHTSKQRSMTFRPLSQC 323
Cdd:MTH00034 244 LLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQI 323

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....
gi 331746964 324 MFWLLVADLLTLTWIGGQPVEHPYIIIGQLASILYFLIITALMPLTSLLENHLL 377
Cdd:MTH00034 324 AFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLI 377
CYTB MTH00145
cytochrome b; Provisional
 1-377 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 568.77  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   1 MTNIRKSHPLMKIINDSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLR 80
Cdd:MTH00145   2 LSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLR 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  81 YLHANGASMFFICLYLHIGRGLYYGSYMYTETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDL 160
Cdd:MTH00145  82 SLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKML 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 161 VEWIWGGFSVDKATLTRFFAFHFLFPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLAMITSLL 240
Cdd:MTH00145 162 VEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLV 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 241 ALVLFSPDMLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLIIIPLLHTSKQRSMTFRPL 320
Cdd:MTH00145 242 FLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPL 321

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 331746964 321 SQCMFWLLVADLLTLTWIGGQPVEHPYIIIGQLASILYFLIItALMPLTSLLENHLL 377
Cdd:MTH00145 322 NQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFF-LILPLVQKLWDNIL 377
CYTB MTH00016
cytochrome b; Validated
 4-378 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 552.36  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   4 IRKSHPLMKIINDSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLRYLH 83
Cdd:MTH00016   5 MRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLH 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  84 ANGASMFFICLYLHIGRGLYYGSYMYTETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEW 163
Cdd:MTH00016  85 ANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQW 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 164 IWGGFSVDKATLTRFFAFHFLFPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLAMITSLLALV 243
Cdd:MTH00016 165 LWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVV 244

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 244 LFSPDMLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLIIIPLLHTSKQRSMTFRPLSQC 323
Cdd:MTH00016 245 LLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQI 324

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 331746964 324 MFWLLVADLLTLTWIGGQPVEHPYIIIGQLASILYFLIITaLMPLTSLLENHLLK 378
Cdd:MTH00016 325 LFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFM-INPLLMKLWDKLLK 378
CYTB MTH00022
cytochrome b; Validated
 4-378 3.33e-180

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 505.01  E-value: 3.33e-180
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   4 IRKSHPLMKIINDSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLRYLH 83
Cdd:MTH00022   3 LRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLH 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  84 ANGASMFFICLYLHIGRGLYYGSYMYTETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEW 163
Cdd:MTH00022  83 ANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQW 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 164 IWGGFSVDKATLTRFFAFHFLFPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLAMITSLLALV 243
Cdd:MTH00022 163 VWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIV 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 244 LFSPDMLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLIIIPLLHTSKQRSMTFRPLSQC 323
Cdd:MTH00022 243 YFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRM 322

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 331746964 324 MFWLLVADLLTLTWIGGQPVEHPYIIIGQLASILYFLIITALMPLTSLLENHLLK 378
Cdd:MTH00022 323 AFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLLF 377
CYTB MTH00053
cytochrome b; Provisional
 4-378 6.99e-179

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 501.93  E-value: 6.99e-179
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   4 IRKSHPLMKIINDSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLRYLH 83
Cdd:MTH00053   5 IRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLH 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  84 ANGASMFFICLYLHIGRGLYYGSYMYTETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEW 163
Cdd:MTH00053  85 ANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRW 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 164 IWGGFSVDKATLTRFFAFHFLFPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLAMITSLLALV 243
Cdd:MTH00053 165 VWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIV 244

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 244 LFSPDMLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLIIIPLLHTSKQRSMTFRPLSQC 323
Cdd:MTH00053 245 FLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKI 324

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 331746964 324 MFWLLVADLLTLTWIGGQPVEHPYIIIGQLASILYFLIITALMPLTSLLENHLLK 378
Cdd:MTH00053 325 LFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLLK 379
CYTB MTH00224
cytochrome b; Provisional
 4-378 2.15e-170

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 480.19  E-value: 2.15e-170
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   4 IRKSHPLMKIINDSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLRYLH 83
Cdd:MTH00224   5 FRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIH 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  84 ANGASMFFICLYLHIGRGLYYGSYMYTETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEW 163
Cdd:MTH00224  85 ANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEW 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 164 IWGGFSVDKATLTRFFAFHFLFPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLAMITSLLALV 243
Cdd:MTH00224 165 IWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMV 244

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 244 LFSPDMLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLIIIPLLHTSKQRSMTFRPLSQC 323
Cdd:MTH00224 245 LFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQL 324

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 331746964 324 MFWLLVADLLTLTWIGGQPVEHPYIIIGQLASILYFlIITALMPLTSLLENHLLK 378
Cdd:MTH00224 325 LFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYF-SYFIISPAISKLWDDLLN 378
CYTB MTH00033
cytochrome b; Provisional
 10-374 8.07e-131

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 380.05  E-value: 8.07e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  10 LMKIINDsFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLRYLHANGASM 89
Cdd:MTH00033   8 LLEPVND-IIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  90 FFICLYLHIGRGLYYGSYMYTETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFS 169
Cdd:MTH00033  87 FFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFS 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 170 VDKATLTRFFAFHFLFPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLaMITSLLALVLFSP-- 247
Cdd:MTH00033 167 VSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFL-ILFGVFVIIGIEPri 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 248 -DMLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLIIIPLLHTSKQRSMTFRPLSQCMFW 326
Cdd:MTH00033 246 eTLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFW 325

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*....
gi 331746964 327 LLVADLLTLTWIGGQPV-EHPYIIIGQLASILYFLIITALMPLTSLLEN 374
Cdd:MTH00033 326 FIVGDFIILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSN 374
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-373 2.54e-122

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 358.72  E-value: 2.54e-122
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   1 MTNIRKSHPLMKIIND---------SFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICR 71
Cdd:COG1290    1 MSTTKKASGLADWLDErlplaslvrEHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  72 DVNYGWVLRYLHANGASMFFICLYLHIGRGLYYGSYMYTE--TWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNL 149
Cdd:COG1290   81 DVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 150 LSAIPYIGTDLVEWIWGGFSVDKATLTRFFAF-HFLFPFIISAMVMVHLLFLHETGSNNPTGI----PSNMDMIPFHPYY 224
Cdd:COG1290  161 FGAIPVIGTWLVTWLFGGEFPGDATLNRFFALhVLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYY 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 225 TIKDILGLLAMITSLLALVLFSPDmlGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALVLSILVLI 302
Cdd:COG1290  241 TVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLF 318

                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 331746964 303 IIPLLHTSKQRSMTFRPLSQCMFWLLVADLLTLTWIGGQPVehPYIIIGQLASILYFLIITALMPLTSLLE 373
Cdd:COG1290  319 LLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
CYTB MTH00086
cytochrome b; Provisional
 12-366 4.26e-112

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 331.13  E-value: 4.26e-112
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  12 KIINDSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLRYLHANGASMFF 91
Cdd:MTH00086   1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  92 ICLYLHIGRGLYYGSYMYTETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVD 171
Cdd:MTH00086  81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 172 KATLTRFFAFHFLFPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLaMITSLLALVLFSPDMLG 251
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNII-FWLVFIIFSLFYPFNLG 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 252 DPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLIIIPLLHTSkqrSMTFRPLSQCMFWLLVAD 331
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVV 316

                        330       340       350
                 ....*....|....*....|....*....|....*
gi 331746964 332 LLTLTWIGGQPVEHPYIIIGQLASILYFLIITALM 366
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILLML 351
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 9-206 1.05e-90

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 271.16  E-value: 1.05e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   9 PLMKIINDSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLRYLHANGAS 88
Cdd:cd00284    1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  89 MFFICLYLHIGRGLYYGSYMYT--ETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWG 166
Cdd:cd00284   81 MFFLMLYLHIFRGLYYGSYKKPreLTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 331746964 167 GFSVDKATLTRFFAFHFLFPFIISAMVMVHLLFLHETGSN 206
Cdd:cd00284  161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
CYTB MTH00046
cytochrome b; Validated
 10-357 1.08e-87

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 269.16  E-value: 1.08e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  10 LMKIINDSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLRYLHANGASM 89
Cdd:MTH00046   1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  90 FFICLYLHIGRGLYYGSYMYTETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFS 169
Cdd:MTH00046  81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 170 VDKATLTRFFAFHFLFPFIISAMVMVHLLFLHETGSNNPTGIPSNM-DMIPFHPYYTIKDILGLLAMITSLLALVLFSPD 248
Cdd:MTH00046 161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPD 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 249 MLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLIIipllhTSKQRSMTFRPLSQCMFWLL 328
Cdd:MTH00046 241 LVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLVLVLSFLFFLWV-----PTFNGSSVYSVWRQVNFWLI 315

                        330       340
                 ....*....|....*....|....*....
gi 331746964 329 VADLLTLTWIGGQPVEHPYIIIGQLASIL 357
Cdd:MTH00046 316 VSLFFSLSYLGGCHPEYPYLLISQLFSVL 344
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
18-204 6.52e-82

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 248.07  E-value: 6.52e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   18 FIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLRYLHANGASMFFICLYLH 97
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   98 IGRGLYYGSYMYT--ETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATL 175
Cdd:pfam00033  81 IFRGLYYGGFSYPreLTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 331746964  176 TRFFAFHFLFPFIISAMVMVHLLFLHETG 204
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 207-354 1.25e-50

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 166.28  E-value: 1.25e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 207 NPTGIPSNMDMIPFHPYYTIKDILGLLAMITSLLALVLFSPDMLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPN 286
Cdd:cd00290    1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 331746964 287 KLGGVLALVLSILVLIIIPLLHTSKQRSmTFRPLSQCMFWLLVADLLTLTWIGGQPVEHPYIIIGQLA 354
Cdd:cd00290   81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
258-358 4.34e-41

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 139.92  E-value: 4.34e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  258 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLIIIPLLHTSKQRSMTFRPLSQCMFWLLVADLLTLTW 337
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 331746964  338 IGGQPVEHPYIIIGQLASILY 358
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
88-253 1.18e-40

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 141.22  E-value: 1.18e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964   88 SMFFICLYLHIGRGLYYGSYMYTE--TWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIW 165
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  166 GGFSVDKATLTRFFAF-HFLFPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLAMITSLLALVL 244
Cdd:pfam13631  81 GGPFPGTATIPRFYALhILLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160


                  ....*....
gi 331746964  245 FSPDMLGDP 253
Cdd:pfam13631 161 INPIWLGGP 169
PRK03735 PRK03735
cytochrome b6; Provisional
 33-177 7.23e-32

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 119.82  E-value: 7.23e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  33 FGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLRYLHANGASMFFICLYLHIGRGLYYGSYMYTE- 111
Cdd:PRK03735  44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 331746964 112 -TWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTR 177
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTR 190
petB CHL00070
cytochrome b6
 24-208 1.71e-27

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 107.88  E-value: 1.71e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964  24 PSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLRYLHANGASMFFICLYLHIGRGLY 103
Cdd:CHL00070  27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746964 104 YGSYMYTE--TWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAF 181
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186

                        170       180
                 ....*....|....*....|....*...
gi 331746964 182 HFLFPFIISAMVMV-HLLFLHETGSNNP 208
Cdd:CHL00070 187 HTFVLPLLTAVFMLmHFLMIRKQGISGP 214
petD CHL00058
cytochrome b6/f complex subunit IV
 229-293 9.26e-11

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 59.63  E-value: 9.26e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 331746964 229 ILGLLAMITSLLALvlfSPDMLGDPdnyspANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLA 293
Cdd:CHL00058  44 ILGTIACNVGLAVL---EPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLL 100
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 229-293 1.11e-10

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 59.81  E-value: 1.11e-10
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 331746964 229 ILGLLAMITsllALVLFSPDMLGDPdnyspANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLA 293
Cdd:COG5679   45 ILGTIALCI---GLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVM 101
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 229-293 5.21e-09

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 54.80  E-value: 5.21e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 331746964  229 ILGLLAMITSLLALvlfSPDMLGDPdnyspANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLA 293
Cdd:TIGR01156  44 ILGTIACVVGLAVL---DPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLL 100
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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