NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|339505995|ref|YP_004717824|]
View 

ATP synthase F0 subunit 8 (mitochondrion) [Amphilius sp. NM-2010]

Protein Classification

ATP synthase F0 subunit 8( domain architecture ID 10009578)

ATP synthase F0 subunit 8 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-55 3.30e-25

ATP synthase F0 subunit 8; Provisional


:

Pssm-ID: 177191  Cd Length: 55  Bit Score: 86.85  E-value: 3.30e-25
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 339505995  1 MPQLNPTPWLAILMFSWLIFLTVIPNKVLNHAFTNEITMSNAENLKSNTWNWPWH 55
Cdd:MTH00133  1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWPWH 55
 
Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-55 3.30e-25

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177191  Cd Length: 55  Bit Score: 86.85  E-value: 3.30e-25
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 339505995  1 MPQLNPTPWLAILMFSWLIFLTVIPNKVLNHAFTNEITMSNAENLKSNTWNWPWH 55
Cdd:MTH00133  1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWPWH 55
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-54 1.53e-07

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 42.33  E-value: 1.53e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 339505995   1 MPQLNPTPWLAILMFSWLIFLTVIPNKVLNHAFTNEITMSNAENLKSNTWNWPW 54
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTNPPPKSLKTTKHPNPWEWKW 54
 
Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-55 3.30e-25

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177191  Cd Length: 55  Bit Score: 86.85  E-value: 3.30e-25
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 339505995  1 MPQLNPTPWLAILMFSWLIFLTVIPNKVLNHAFTNEITMSNAENLKSNTWNWPWH 55
Cdd:MTH00133  1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWPWH 55
ATP8 MTH00072
ATP synthase F0 subunit 8; Provisional
 1-55 4.79e-15

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 164642  Cd Length: 54  Bit Score: 61.53  E-value: 4.79e-15
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 339505995  1 MPQLNPTPWLAILMFSWLIFLTVIPNKVLNHAFTNEITMSNAENlKSNTWNWPWH 55
Cdd:MTH00072  1 MPQLNPGPWFAIFLMSWLIFLLILPFKISNHKNLNEPTSQNKKN-KPESWNWPWT 54
ATP8 MTH00171
ATP synthase F0 subunit 8; Provisional
 1-54 8.76e-15

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177225  Cd Length: 54  Bit Score: 60.84  E-value: 8.76e-15
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 339505995  1 MPQLNPTPWLAILMFSWLIFLTVIPNKVLNHAFTNEITMSNAENLKSNTWNWPW 54
Cdd:MTH00171  1 MPQLNPIPWFFIFLFSWLIFLTLLPNKITKHIFTNKPSPNQTEKPKPNEWNWPW 54
ATP8 MTH00123
ATP synthase F0 subunit 8; Provisional
 1-55 1.19e-07

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 214426  Cd Length: 54  Bit Score: 42.57  E-value: 1.19e-07
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 339505995  1 MPQLNPTPWLAILMFSWLIFLTVIPNKVLNHAFTNEITMSNaENLKSNTWNWPWH 55
Cdd:MTH00123  1 MPQLNPAPWFLIMLLTWLTLILIIQPKILSFTPTNNPTKTN-TTTNTTPWTWPWT 54
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-54 1.53e-07

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 42.33  E-value: 1.53e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 339505995   1 MPQLNPTPWLAILMFSWLIFLTVIPNKVLNHAFTNEITMSNAENLKSNTWNWPW 54
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTNPPPKSLKTTKHPNPWEWKW 54
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH