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Conserved domains on  [gi|470227339|ref|YP_007624717|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Tachycineta albiventer]

Protein Classification

ND4L family protein( domain architecture ID 10009575)

ND4L family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.79e-40

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177184  Cd Length: 98  Bit Score: 128.81  E-value: 1.79e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470227339  1 MTALHLSFYSAFALSSLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSPILLPILMLTFSACEAGTGLALLVA 80
Cdd:MTH00125  1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                        90
                ....*....|....*...
gi 470227339 81 STRTHGSDHLHNFNLLRC 98
Cdd:MTH00125 81 TTRTHGSDHLKNLNLLQC 98
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.79e-40

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 128.81  E-value: 1.79e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470227339  1 MTALHLSFYSAFALSSLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSPILLPILMLTFSACEAGTGLALLVA 80
Cdd:MTH00125  1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                        90
                ....*....|....*...
gi 470227339 81 STRTHGSDHLHNFNLLRC 98
Cdd:MTH00125 81 TTRTHGSDHLKNLNLLQC 98
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
11-98 1.42e-13

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 60.66  E-value: 1.42e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470227339  11 AFALSSLGLAFHRtHLISALLCLESMMLSMYIALSMWPIQTQTTSPILLPILMLTFSACEAGTGLALLVASTRTHGSDHL 90
Cdd:pfam00420  9 LFLIGLYGLLLRR-NLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87


                 ....*...
gi 470227339  91 HNFNLLRC 98
Cdd:pfam00420 88 DSLNLLKG 95
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 4-97 7.32e-05

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 38.12  E-value: 7.32e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470227339  4 LHLSFYSAFALSSLGL--AFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSPILLPILMLTFSACEAGTGLALLVAS 81
Cdd:COG0713   3 LEHYLILAAILFAIGLygVLTRRNLIVVLMSIELMLNAVNLNLVAFSRYLGDLDGQVFALFVIAVAAAEVAVGLAIIVAL 82

                        90
                ....*....|....*.
gi 470227339 82 TRTHGSDHLHNFNLLR 97
Cdd:COG0713  83 YRNRGTIDVDDLNELK 98
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.79e-40

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 128.81  E-value: 1.79e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470227339  1 MTALHLSFYSAFALSSLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSPILLPILMLTFSACEAGTGLALLVA 80
Cdd:MTH00125  1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                        90
                ....*....|....*...
gi 470227339 81 STRTHGSDHLHNFNLLRC 98
Cdd:MTH00125 81 TTRTHGSDHLKNLNLLQC 98
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 1-98 2.90e-39

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 125.87  E-value: 2.90e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470227339  1 MTALHLSFYSAFALSSLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSPILLPILMLTFSACEAGTGLALLVA 80
Cdd:MTH00067  1 MSPTYFTFYSAFLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSLPMFMLTFSACEASTGLALMVA 80

                        90
                ....*....|....*...
gi 470227339 81 STRTHGSDHLHNFNLLRC 98
Cdd:MTH00067 81 TTRTHGTDHLKNLNLLQC 98
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 1-98 2.42e-38

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 123.54  E-value: 2.42e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470227339  1 MTALHLSFYSAFALSSLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSPILLPILMLTFSACEAGTGLALLVA 80
Cdd:MTH00126  1 MTPVHFSFSSAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAAPMLLLAFSACEASAGLALLVA 80

                        90
                ....*....|....*...
gi 470227339 81 STRTHGSDHLHNFNLLRC 98
Cdd:MTH00126 81 TARTHGTDRLQNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.19e-22

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 83.83  E-value: 1.19e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470227339  1 MTALHLSFYSAFALSSLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSPILLPILMLTFSACEAGTGLALLVA 80
Cdd:MTH00107  1 MSLIYMNIMLAFTISLLGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMMPIILLVFAACEAAVGLALLVM 80

                        90
                ....*....|....*...
gi 470227339 81 STRTHGSDHLHNFNLLRC 98
Cdd:MTH00107 81 VSNTYGTDYVQNLNLLQC 98
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 4-96 7.19e-21

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 79.22  E-value: 7.19e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470227339  4 LHLSFYSAFALSSLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSPILLPILMLTFSACEAGTGLALLVASTR 83
Cdd:MTH00181  1 MMFVFISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALFSLLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNR 80

                        90
                ....*....|...
gi 470227339 84 THGSDHLHNFNLL 96
Cdd:MTH00181 81 THGSDHLLKFNLL 93
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 1-97 2.23e-15

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 65.32  E-value: 2.23e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470227339  1 MTALHLSFYSAFALSSLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSPILLPILMLTFSACEAGTGLALLVA 80
Cdd:MTH00043  1 MNIILIIILSSFFLGLLGILINRLHLLSILLCLELLLISLFLNISIWSLNYGNFSNLSFSLLLLTLSACEASIGLSLMVL 80

                        90
                ....*....|....*..
gi 470227339 81 STRTHGSDHLHNFNLLR 97
Cdd:MTH00043 81 LSRNHNSDLVASLNLLQ 97
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
11-98 1.42e-13

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 60.66  E-value: 1.42e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470227339  11 AFALSSLGLAFHRtHLISALLCLESMMLSMYIALSMWPIQTQTTSPILLPILMLTFSACEAGTGLALLVASTRTHGSDHL 90
Cdd:pfam00420  9 LFLIGLYGLLLRR-NLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87


                 ....*...
gi 470227339  91 HNFNLLRC 98
Cdd:pfam00420 88 DSLNLLKG 95
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 6-98 5.88e-10

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 51.51  E-value: 5.88e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470227339  6 LSFYSAFALSSLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQttSPILLPILMLTFSACEAGTGLALLVASTRTH 85
Cdd:MTH00188  7 LVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYME--KELYLSLVLLTFAACEASVGLALLVSLIRSH 84

                        90
                ....*....|...
gi 470227339 86 GSDHLHNFNLLRC 98
Cdd:MTH00188 85 GSDYVSSLNLIKC 97
ND4L MTH00180
NADH dehydrogenase subunit 4L; Provisional
 12-97 1.55e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177231  Cd Length: 99  Bit Score: 45.02  E-value: 1.55e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470227339 12 FALSSLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSPILLPILMLTFSACEAGTGLALLVASTRTHGSDHLH 91
Cdd:MTH00180 13 FILGVLGIVLNRSNLIIMLMSIELMLLAISLLFLINSVAIDNLIGQIFTIMILTVAAAESAIGLAILVAYYRIRGTIAVK 92


                ....*.
gi 470227339 92 NFNLLR 97
Cdd:MTH00180 93 SLNLLR 98
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 12-98 3.15e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 44.45  E-value: 3.15e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470227339 12 FALSSLGLAFHRTHLISALLCLESMMLSMYIalSMWPIQTQTTSPILLPILMLTFSACEAGTGLALLVASTRTHGSDHLH 91
Cdd:MTH00149 13 FLMGVFALLFQYKHLLSILLSLEALMLSLLV--MMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSLIRLHGNDYVS 90


                ....*..
gi 470227339 92 NFNLLRC 98
Cdd:MTH00149 91 SLSSLKF 97
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 1-98 1.15e-06

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 42.82  E-value: 1.15e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470227339  1 MTALHLSFYSAFALSSLGLAFHRTHLISALLCLESMMLSMYIaLSMWPIQTQTTSPILLPILMLTFSACEAGTGLALLVA 80
Cdd:MTH00013  1 MMSPLFILSISPFISMFNLSLQRKHLLMSLLSLEAMILSLAL-FIPLSLMFANQVNGMLAIVLLTFGACEASLGLSLLVL 79

                        90
                ....*....|....*...
gi 470227339 81 STRTHGSDHLHNFNLLRC 98
Cdd:MTH00013 80 MTRSYGNDMLKSLTSNKC 97
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 12-92 1.94e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 42.06  E-value: 1.94e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470227339 12 FALSSLGLAFHRTHLISALLCLESMMLSMYIALSMwpIQTQTTSPILLPILMLTFSACEAGTGLALLVASTRTHGSDHLH 91
Cdd:MTH00162 11 FFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFL--YLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFS 88


                .
gi 470227339 92 N 92
Cdd:MTH00162 89 S 89
ND4L MTH00001
NADH dehydrogenase subunit 4L; Provisional
 12-97 9.22e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177099  Cd Length: 99  Bit Score: 40.43  E-value: 9.22e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470227339 12 FALSSLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSPILLPILMLTFSACEAGTGLALLVASTRTHGSDHLH 91
Cdd:MTH00001 13 FLLGIWGIILNRGHFIIMLVSIELVLLSTFFLFLINSIEIDLLIEQIFTIMGLTIAAAESAIGLAIMVAYYRIRGTISLK 92


                ....*.
gi 470227339 92 NFNLLR 97
Cdd:MTH00001 93 SLNSLR 98
PRK05715 PRK05715
NADH-quinone oxidoreductase subunit NuoK;
1-97 5.75e-05

NADH-quinone oxidoreductase subunit NuoK;


Pssm-ID: 180218  Cd Length: 100  Bit Score: 38.62  E-value: 5.75e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470227339   1 MTALHLSFYSA--FALSSLGLaFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSPILLPILMLTFSACEAGTGLALL 78
Cdd:PRK05715   2 IPLQHYLILAAilFCIGLVGL-LLRRNAIVVLMSIELMLNAVNLNFVAFSSYLGDLDGQVFAFFVITVAAAEAAIGLAIL 80

                         90
                 ....*....|....*....
gi 470227339  79 VASTRTHGSDHLHNFNLLR 97
Cdd:PRK05715  81 LQLYRNRGTIDVDDLNELK 99
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 4-97 7.32e-05

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 38.12  E-value: 7.32e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470227339  4 LHLSFYSAFALSSLGL--AFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSPILLPILMLTFSACEAGTGLALLVAS 81
Cdd:COG0713   3 LEHYLILAAILFAIGLygVLTRRNLIVVLMSIELMLNAVNLNLVAFSRYLGDLDGQVFALFVIAVAAAEVAVGLAIIVAL 82

                        90
                ....*....|....*.
gi 470227339 82 TRTHGSDHLHNFNLLR 97
Cdd:COG0713  83 YRNRGTIDVDDLNELK 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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