|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 697.09 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 1 MLKILIPTIMLLPTTWFSSPKWLWPTSLLHSIAIAVASLTWLKNTSETGWSSLNTMLATDSLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 81 SQSHTAQEPINRQRTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 161 LLVALLLLQNTTGTLSMLTLHYSTCPELTSYADKLWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 241 GYGMMRIIVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 321 GLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLALPPLPNLMGELLIISSLFMWTPWTIALTGLG 400
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 642277079 401 TLITAGYSLYLFLMTQRGPLPPHIIALEPSHSREHLLMVLHLVPLVLLILKPELIWGW 458
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGW 458
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 660.07 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 1 MLKILIPTIMLLPTTWFSSPKWLWPTSLLHSIAIAVASLTWLKNTSETGWSSlNTMLATDSLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFT-NKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 81 SQSHTAQEPINRQRTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00068 80 SQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 161 LLVALLLLQNTTGTLSMLTLHYSTCPELTSYADKLWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 241 GYGMMRIIVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 321 GLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLALPPLPNLMGELLIISSLFMWTPWTIALTGLG 400
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 642277079 401 TLITAGYSLYLFLMTQRGPLPPHIIALEPSHSREHLLMVLHLVPLVLLILKPELIWGWM 459
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGMF 458
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 648.41 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 1 MLKILIPTIMLLPTTWFSSPKWLWPTSLLHSIAIAVASLTWLKNTSETGwSSLNTMLATDSLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPT-KNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 81 SQSHTAQEPINRQRTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00124 80 SQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 161 LLVALLLLQNTTGTLSMLTLHYSTCPELTSYADKLWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 241 GYGMMRIIVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 321 GLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLALPPLPNLMGELLIISSLFMWTPWTIALTGLG 400
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 642277079 401 TLITAGYSLYLFLMTQRGPLPPHIIALEPSHSREHLLMVLHLVPLVLLILKPELIWGW 458
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 641.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 1 MLKILIPTIMLLPTTWFSSPKWLWPTSLLHSIAIAVASLTWLKNTSETGWSsLNTMLATDSLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLN-FSLLFFSDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 81 SQSHTAQEPINRQRTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00110 80 SQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 161 LLVALLLLQNTTGTLSMLTLHYSTCPELTSYADKLWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 241 GYGMMRIIVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 321 GLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLALPPLPNLMGELLIISSLFMWTPWTIALTGLG 400
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 642277079 401 TLITAGYSLYLFLMTQRGPLPPHIIALEPSHSREHLLMVLHLVPLVLLILKPELIWG 457
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILG 456
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-455 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 546.46 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 3 KILIPTIMLLPTTWFSSPKWLWPTSLLHSIAIAVASLTWLKNTSETGWSSLNTMLATDSLSTPLLVLTCWLLPLMILASQ 82
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 83 SHTAQEPINRQRTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLL 162
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 163 VALLLLQNTTGTLSMLTLHYSTcpeLTSYADKLWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 242
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSK---LTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 243 GMMRIIVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGL 322
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 323 TSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLALPPLPNLMGELLIISSLFMWTPWTIALTGLGTL 402
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 642277079 403 ITAGYSLYLFLMTQRGPLPPHIIALEPSHSREHLLMVLHLVPLVLLILKPELI 455
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-435 |
1.58e-165 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 474.46 E-value: 1.58e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 1 MLKILIPTIMLLPTTWFSSPKWLWPTSLLHSIAIAVASLTWLKNTSETGWSSLNTMLATDSLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 81 SQSHTAQEPINRQRTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 161 LLVALLLLQNTTGTLSMLTLHYSTCPELTSYADKLWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 241 GYGMMRIIVMLD-PLTKELSYPFIILALWGIIMTGSICLRQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIA 319
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 320 HGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLALPPLPNLMGELLIISSLFMWTPWTIALTGL 399
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430
....*....|....*....|....*....|....*.
gi 642277079 400 GTLITAGYSLYLFLMTQRGPLPPHIIALEPSHSREH 435
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREH 436
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
44-459 |
4.76e-124 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 367.24 E-value: 4.76e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 44 NTSETGWSSLNTMLATDSLSTPLLVLTCWLLPLMILASQSHTaqEPINRQRTYISLLTSLQIFLIMAFGATEVILFYVMF 123
Cdd:MTH00150 7 YSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSV--KLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFF 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 124 EATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTTGTLSMLTLHYSTCPELTSYadkLWWAGCLVA 203
Cdd:MTH00150 85 EASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLLVFLA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 204 FLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDV 283
Cdd:MTH00150 162 FLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDV 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 284 KSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIA 363
Cdd:MTH00150 242 KSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLF 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 364 SLANLALPPLPNLMGELLIISSLFMWTPWTIALTGLGTLITAGYSLYLFLMTQRGPLPPHIIALEPSHSREHLLMVLHLV 443
Cdd:MTH00150 322 CIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWV 401
|
410
....*....|....*.
gi 642277079 444 PLVLLILKPELIWGWM 459
Cdd:MTH00150 402 PLLLLILKSDLLFMWI 417
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-418 |
2.97e-122 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 363.32 E-value: 2.97e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 1 MLKILIPTIMLLPTTWFSSPKWLwptslLHSIAIAVASLTWLKNTSETGWSSLNTMLATDSLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWL-----VQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 81 SQSHTaqEPINRQRTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00163 76 SESVY--KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 161 LLVALLLLQNTTGTLSMLTLHYStcpeltSYADKLWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00163 154 LLVGIFYLYNNSGSLSFFLLNFF------GSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 241 GYGMMRIIVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGH 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 321 GLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLALPPLPNLMGELLIISSLFMWTPWTIALTGLG 400
Cdd:MTH00163 308 GLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLL 387
|
410
....*....|....*...
gi 642277079 401 TLITAGYSLYLFLMTQRG 418
Cdd:MTH00163 388 SFFSAAYSLYLYSYSQHG 405
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
51-418 |
1.99e-110 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 333.48 E-value: 1.99e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 51 SSLNTMLATDSLSTPLLVLTCWLLPLMILASqsHTAQEPINRQRTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPT 130
Cdd:MTH00205 47 SFISSSFSFDSLSLPLIMLSFWISLLMVLAS--YKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPT 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 131 LIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTTGTLSMltlHYSTCPELTSYADKLWWAGCLVAFLVKMPL 210
Cdd:MTH00205 125 LILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSM---FFNFPLNFSDFYLFLYWIFLMLAFLVKLPM 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 211 YGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDVKSLIAYS 290
Cdd:MTH00205 202 YFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYS 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 291 SVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLAL 370
Cdd:MTH00205 282 SVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAA 361
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 642277079 371 PPLPNLMGELLIISSLFMWTPWTIALTGLGTLITAGYSLYLFLMTQRG 418
Cdd:MTH00205 362 PPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHG 409
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-459 |
2.03e-109 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 330.93 E-value: 2.03e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 1 MLKILIPTIMLLPTTWFSSpKWLWPTSLLHSIAIAVASLTWLKNTSeTGWSSLNTMLATDSLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKY-PWSWALTFSTLLLLSLFTLLNLYPMS-APYSMFTESLSSDMLSAPLITLTLWITALMILA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 81 SQS--HTAQEPinrqRTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGS 158
Cdd:MTH00014 79 SFKifQNNKAP----KTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTAS 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 159 LPLLVALLLLQNTTGTLSMLTLHYSTCpelTSYADKLWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLK 238
Cdd:MTH00014 155 LPLLMSILLIFYTNNSLSMLMSSMEPP---SIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLK 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 239 LGGYGMMRIIVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMI 318
Cdd:MTH00014 232 LGGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMI 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 319 AHGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLALPPLPNLMGELLIISSLFMWTPWTIALTG 398
Cdd:MTH00014 312 AHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLA 391
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 642277079 399 LGTLITAGYSLYLFLMTQRGPLPPHIIALEPSHSREHLLMVLHLVPLVLLILKPELIWGWM 459
Cdd:MTH00014 392 ITSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNWL 452
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
57-434 |
1.99e-89 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 280.43 E-value: 1.99e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 57 LATDSLSTPLLVLTCWLLPLMILASqshtAQEPINRQRTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPTLIIITR 136
Cdd:COG1008 78 LGVDGISLPLVLLTALLTPLAILAS----WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGI 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 137 WGNQtERLNAGTYFLFYTLAGSLP--LLVALLLLQNTTGTLSMLTLHYSTCPELTSYadkLWWAGCLVAFLVKMPLYGVH 214
Cdd:COG1008 154 WGGE-RRIYAAIKFFLYTLAGSLLmlVAILALYFLAGALTFDIAELAAAPLPLTAQL---LLFLAFFIAFAVKVPMFPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 215 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLDPL-TKELSYPFIILALWGIIMTGSICLRQTDVKSLIAYSSVS 293
Cdd:COG1008 230 TWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 294 HMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLALPPL 373
Cdd:COG1008 310 HMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGT 389
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 642277079 374 PNLMGELLIISSLFMWTPWTIALTGLGTLITAGYSLYLFLMTQRGPLPPHIIALEPSHSRE 434
Cdd:COG1008 390 SGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRE 450
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
57-434 |
7.95e-82 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 261.29 E-value: 7.95e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 57 LATDSLSTPLLVLTCWLLPLMILASqSHTAQepiNRQRTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPTLIIITR 136
Cdd:PRK05846 78 LGVDGISLLLVVLTALLTPLAVLAS-WEEIK---KRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGV 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 137 WGnQTERLNAGTYFLFYTLAGSLPL----LVALLLLQNTTGTLSMLTLHYSTcpeLTSYADKLWWAGCLVAFLVKMPLYG 212
Cdd:PRK05846 154 WG-GKNRIYAATKFFLYTLLGSLLMlvaiIYLVVVYYNATGTFDIADLLNLP---LPPGVQYWLFLAFFIAFAVKMPMFP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 213 VHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLDPL-TKELSYPFIILALWGIIMTGSICLRQTDVKSLIAYSS 291
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 292 VSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLALP 371
Cdd:PRK05846 310 ISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLP 389
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 642277079 372 PLPNLMGELLIISSLFMWTPWTIALTGLGTLITAGYSLYLFLMTQRGPLPPHIIALEPSHSRE 434
Cdd:PRK05846 390 GTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRE 452
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-426 |
1.96e-79 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 254.48 E-value: 1.96e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 57 LATDSLSTPLLVLTCWLLPLMILASQshtaQEPINRQRTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPTLIIITR 136
Cdd:TIGR01972 73 LGVDGISLLLVLLTALLTLLAILASW----ESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 137 WGNQTeRLNAGTYFLFYTLAGSLPLLVALLLLQNTTGTLSMLTLHYSTcpELTSYADKLWWAGCLVAFLVKMPLYGVHLW 216
Cdd:TIGR01972 149 WGGPN-RIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFDLLELLNL--PLPFGVQTWLFLAFFIAFAVKVPLFPLHTW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 217 LPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLDP-LTKELSYPFIILALWGIIMTGSICLRQTDVKSLIAYSSVSHM 295
Cdd:TIGR01972 226 LPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHM 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 296 GLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLALPPLPN 375
Cdd:TIGR01972 306 GFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSG 385
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 642277079 376 LMGELLIISSLFMWTPWTIALTGLGTLITAGYSLYLFLMTQRGPLPPHIIA 426
Cdd:TIGR01972 386 FVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVA 436
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
54-412 |
1.04e-71 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 234.57 E-value: 1.04e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 54 NTMLATDSLSTPLLVLTCWLLPLMILASQSHTAQepinRQRTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPTLII 133
Cdd:MTH00204 76 PLVFAVDGVSLFFILLTTLLIPICILISWKSIKF----LFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLL 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 134 ITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTTGTLSMLTLhysTCPELTSYADKLWWAGCLVAFLVKMPLYGV 213
Cdd:MTH00204 152 IGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQIL---LNIKLPLSIQKWLLVGFFLSLAVKIPQIPF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 214 HLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLDPLTKELSYPFII-LALWGIIMTGSICLRQTDVKSLIAYSSV 292
Cdd:MTH00204 229 HIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVmLSVIAVIYGSLTTCRQVDFKRLIAYSSV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 293 SHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLALPP 372
Cdd:MTH00204 309 AHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPL 388
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 642277079 373 LPNLMGELLIISSLFMWTPWTIALTGLGTLITAGYSLYLF 412
Cdd:MTH00204 389 SCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
57-412 |
8.23e-69 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 226.86 E-value: 8.23e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 57 LATDSLSTPLLVLTCWLLPLMILASQshtaqEPINRQ-RTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPTLIIIT 135
Cdd:MTH00217 76 FAVDGISIFFLILTALLTPICILISW-----NSIKFLiKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 136 RWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTTGTLSMLTLhysTCPELTSYADKLWWAGCLVAFLVKMPLYGVHL 215
Cdd:MTH00217 151 IWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQAL---CCLKIEKELQYFIFLGFFLSLAIKIPKIPFHI 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 216 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLDPLTKELSYPFI-ILALWGIIMTGSICLRQTDVKSLIAYSSVSH 294
Cdd:MTH00217 228 WLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAH 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 295 MGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLALPPLP 374
Cdd:MTH00217 308 MGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSC 387
|
330 340 350
....*....|....*....|....*....|....*...
gi 642277079 375 NLMGELLIISSLFMWTPWTIALTGLGTLITAGYSLYLF 412
Cdd:MTH00217 388 NFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-401 |
1.32e-65 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 212.56 E-value: 1.32e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 113 ATEVILFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTTGTLSMLTLHYSTCPELTSYA 192
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 193 DKLWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLDPLTKELSYPFIILALWGIIM 272
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 273 TGSICLRQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLA-NTNYERTHSRTMVLARGLQM 351
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 642277079 352 ILPLMTAWWFIASLANLALPPLPNLMGELLIISSLFMWTPWTIALTGLGT 401
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
56-411 |
6.43e-63 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 212.09 E-value: 6.43e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 56 MLATDSLSTPLLVLTCWLLPLMILASQSHTAQepinRQRTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPTLIIIT 135
Cdd:MTH00226 97 VFAVDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILG 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 136 RWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTTGTLSMLTLhySTCPELTSYADKLW-WAGCLVAFLVKMPLYGVH 214
Cdd:MTH00226 173 IWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTL--ASCSHVVSEQTQKWiFLGIFLAMAVKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 215 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLDPLTKELSYPFII-LALWGIIMTGSICLRQTDVKSLIAYSSVS 293
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIaMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 294 HMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLALPPL 373
Cdd:MTH00226 331 HMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
330 340 350
....*....|....*....|....*....|....*...
gi 642277079 374 PNLMGELLIISSLFMWTPWTIALTGLGTLITAGYSLYL 411
Cdd:MTH00226 411 GNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYF 448
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-417 |
3.15e-53 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 186.01 E-value: 3.15e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 53 LNTMLATDSLSTPLLVLTCWLLPLMILASQSHTaqepiNRQRTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPTLI 132
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWKVT-----RKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 133 IITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLL----QNTTGTLSMLTL-HYSTCPELTSYAdklwwaGCLVAFLVK 207
Cdd:PRK12561 126 LISIWGGQ-KRLYAATKFILYTALASIFILVAGLALalsgDTFTFDLAELGAkSYPLALELLLYA------GFLIAFGVK 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 208 MPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIV-MLDPLTKELSYPFIILALWGIIMTGSICLRQTDVKSL 286
Cdd:PRK12561 199 LPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRR 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 287 IAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLA 366
Cdd:PRK12561 279 LAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMA 358
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 367 NLALPPLPNLMGELLII---------SSLFMWTpwTIALTGLGTLITagySLYLFLMTQR 417
Cdd:PRK12561 359 SLALPGMSGFVSELTVFlgitssdvySSTFRTI--TILLAAVGLILT---PIYLLSMLRR 413
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-416 |
4.07e-49 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 173.41 E-value: 4.07e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 1 MLKILIPTIM-LLPTTWFSSPKWLWPTSLLHSIAIAVASLTWLKNTSETG--------WSS-LNTMLATDSLSTPLLVLT 70
Cdd:COG0651 6 ILPVLLPLLAaALLLLLGRRRRLQRALSLLASLALLALALALLLQVLAGGplvyalggWPApFGIVLVADRLSALFLLLT 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 71 CWLLPLMILASQSHTAQEPinRQRTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPTLIIITRWGNQtERLNAGTYF 150
Cdd:COG0651 86 ALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK-EALRAGLKY 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 151 LFYTLAGSLPLLVALLLLQNTTGTLSMLTLHYSTcPELTSYADKLWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPIAGSM 230
Cdd:COG0651 163 LILNLVGSALFLLGVGLLYGATGTLNMADLAARL-AELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 231 VLAAVLLKLGGYGMMRIIVMLDP--LTKELSYPFIILALWGIIMTGSICLRQTDVKSLIAYSSVSHMGLVAGGILIQTPW 308
Cdd:COG0651 242 LLSGLLTKVGVYAILRVLTLLFGadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPL 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 309 GFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLALPPLPNLMGELLIISSLFM 388
Cdd:COG0651 322 GLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALE 401
|
410 420
....*....|....*....|....*....
gi 642277079 389 -WTPWTIALTGLGTLITAGYSLYLFLMTQ 416
Cdd:COG0651 402 aGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
99-411 |
1.39e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 163.15 E-value: 1.39e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 99 LLTSLQIFLIMAFGATE-VILFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLllqnttgtLSM 177
Cdd:MTH00094 66 ILSNLLILICLLFFVSSnMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL--------KNF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 178 LTLHYSTCPELTSYADKLWWAGClvaFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLDPLtke 257
Cdd:MTH00094 138 FFFSLCYFDFFLSWEMFFILSLS---FMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV--- 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 258 LSYPFIILALWGIIMTGSICLRQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYER 337
Cdd:MTH00094 212 YNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHI 291
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 642277079 338 THSRTMVLARGLQMILPLMTAWWFIASLANLALPPLPNLMGELLIISSLFMWTPWTIALTGLGTLITAGYSLYL 411
Cdd:MTH00094 292 SKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFL 365
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
36-382 |
7.22e-41 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 152.94 E-value: 7.22e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 36 VASLTWLKNTSETgWSslntmLATDSLSTPLLVLTCWLLPLMILASQSHTAqepinRQRTYISLLTSLQIFLIMAFGATE 115
Cdd:PRK02546 68 VESYSWLPQLGLT-WS-----VGADGLSMPLILLTGFITTLAVLAAWPVTF-----KPKLFYFLMLAMYGGQIAVFAVQD 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 116 VILFYVMFEATLIPTLIIITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQNTTGTLSMltlhystcpELTSYADK- 194
Cdd:PRK02546 137 MLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTF---------DMTALAAKd 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 195 -------LWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLDPLTKELSYP-FIILA 266
Cdd:PRK02546 207 fglgfqlLCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLG 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 267 LWGIIMTGSICLRQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLA 346
Cdd:PRK02546 287 VVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEM 366
|
330 340 350
....*....|....*....|....*....|....*.
gi 642277079 347 RGLQMILPLMTAWWFIASLANLALPPLPNLMGELLI 382
Cdd:PRK02546 367 GGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMV 402
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
53-429 |
4.90e-40 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 150.24 E-value: 4.90e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 53 LNTMLATDSLSTPLLVLTCWLLPLMILASQshtaqEPINRQRTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPTLI 132
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 133 IITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQNTTG--TLSMLTLHYSTCPELTSYadkLWWAGCLVAFLVKMPL 210
Cdd:PRK06473 146 LIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLRSHTLPLSTQL---LLLAPILVGFGIKIPL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 211 YGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLDPLTKELSYPFiiLALWGII--MTGSIC-LRQTDVKSLI 287
Cdd:PRK06473 222 VPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPW--LATWAVVsvLYGASCaIAQKDMKKMV 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 288 AYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGL---QMILPLMTAWWFIAS 364
Cdd:PRK06473 300 AYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGV 379
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 642277079 365 LANLALPPLPNLMGELLIISSLFMWTPWTIALTGLGTLITAGYSLYLFLMTQRGPLPPHIIALEP 429
Cdd:PRK06473 380 MASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPR 444
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
57-409 |
5.34e-40 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 150.10 E-value: 5.34e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 57 LATDSLSTPLLVLTCWLLPLMILASQshtaqePINRQ-RTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPTLIIIT 135
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 136 RWGNQtERLNAGTYFLFYTLAGSLPLLVallllqnttGTLSMlTLHYSTCPELT-------SYA---DKLWWAGCLVAFL 205
Cdd:CHL00011 154 MWGGK-KRLYSATKFILYTAGGSIFLLI---------GVLGM-GLYGSNEPTLNfetlanqSYPvalEILFYIGFLIAYA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 206 VKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLDPLTKELSYPF-IILALWGIIMTGSICLRQTDVK 284
Cdd:CHL00011 223 VKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWlVIVGAIQIIYAASTSLGQRNLK 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 285 SLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERThsRTMVLAR--GLQMILPLMTAWWFI 362
Cdd:CHL00011 303 KRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSS 380
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 642277079 363 ASLANLALPPLPNLMGELL----IISS---LFMWTPWTIALTGLGTLITAGYSL 409
Cdd:CHL00011 381 FSMASLALPGMSGFVAELIvffgIITSqkyLLMPKILITFVMAIGMILTPIYLL 434
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-110 |
5.11e-34 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 123.40 E-value: 5.11e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 1 MLKILIPTIMLLPTTWFSSPKWLWPTSLLHSIAIAVASLTWLKNTSETGWSSLNTMLATDSLSTPLLVLTCWLLPLMILA 80
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 642277079 81 SQSHTAQEPINRQRTYISLLTSLQIFLIMA 110
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-423 |
7.14e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 122.00 E-value: 7.14e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 57 LATDSLSTPLLVLTCWLLPLMILASQSHTAQEPINRqrTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPTLIIITR 136
Cdd:PRK12667 78 YEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPE--WYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAY 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 137 WGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTTGTLSM----LTLHYSTCPELTSYADKLWWAG------CLVAFLV 206
Cdd:PRK12667 156 YRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMadlsAKIRGLSFPLTGGLAGNPPLALgvalalALWAFTI 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 207 KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVM-------LDPLTKELSYPFIILALWGIIMTGSICLR 279
Cdd:PRK12667 236 KAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTifgispsLIDFRAALSPILIILGAVSAIIGALMMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 280 QTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAW 359
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFA 395
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 642277079 360 WFIASLANLALPPLPNLMGELLIISSLFMWTPWTIALTGL-GTLITAGYSLYLFLMTQRGPLPPH 423
Cdd:PRK12667 396 FLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLiASAISLVGYFRAWYSLFFGKPKSG 460
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
53-420 |
1.86e-28 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 117.51 E-value: 1.86e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 53 LNTMLATDSLSTPLLVLTCWLLPLMILASQshtaqEPINRQRTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPTLI 132
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 133 IITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQNTTGTLSMLTLHYSTcPELTSYADKLWWAGCLVAFLVKMPLYG 212
Cdd:PRK07363 146 LIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAIST-QNLSLNTQLILLTGLLLGFGIKIPLVP 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 213 VHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLDPLTKELSYPfiILALWGII--MTGS-ICLRQTDVKSLIAY 289
Cdd:PRK07363 224 LHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTIsvIYGAlSAIAQKDIKRMVAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 290 SSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMI---LPLMTAWWFIASLA 366
Cdd:PRK07363 302 SSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMA 381
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 642277079 367 NLALPPLPNLMGELLIISSLFMWTPWTIALTGLGTLITAGYSLYLFLMTQRGPL 420
Cdd:PRK07363 382 SAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRL 435
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-412 |
2.60e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 111.12 E-value: 2.60e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 57 LATDSLSTPLLVLTCwllpLMILASQSHTAQEPINRQRTYISLltslqiFLIMAFGATEVIL------FYVMFEATLIPT 130
Cdd:PRK08375 73 LRADSLSALFLLVTS----ILAIAALLYAIGYGEHRQTRFYAL------FLLLLAGLLGALLtadlfnLFVFLEIMSLSS 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 131 LIIITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQNTTGTLSMLTLHystcpELTSYADKLWWAG--CLVAFLVKM 208
Cdd:PRK08375 143 YALVAMGGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLA-----GALAENPTVVTAFgfVLLALALKA 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 209 PLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRII-VMLDPLTKE---LSYPFIILALWGIIMTGSICLRQTDVK 284
Cdd:PRK08375 217 AVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYfTVFGGDFRFalgLGWLLAVLALLSMLVGSLAALGQDDVK 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 285 SLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIAS 364
Cdd:PRK08375 297 RVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVAS 376
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 642277079 365 LANLALPPLPNLMGELLIISSLF-MWTPWTIALTGLGTLITAGYSLYLF 412
Cdd:PRK08375 377 LSLIGVPPTSGFVSKWYLVVGAVeAGQWLVLAVLLASSLLALLYFLRIW 425
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
201-405 |
7.48e-26 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 109.63 E-value: 7.48e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 201 LVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLD--PLTKELSYPFIILALWGIIMTGSICL 278
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaaIGSDFPGRLLLIFGLLSVLVAAFFLL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 279 RQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTA 358
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGW 380
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 642277079 359 WWFIASLANLALPPLPNLMGELLIISSLFMWTPWTIALTGLGTLITA 405
Cdd:PRK06458 381 GLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLA 427
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
50-387 |
4.25e-19 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 90.18 E-value: 4.25e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 50 WSSLNTMLATDSLSTPLLVLTCWLLPLMILASQSHTAQEPINRQRTYISLLTSLQIF-LIMAFGATEVILFYVMFEATLI 128
Cdd:PRK08667 66 APGLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMAL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 129 PTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTTGTLSMLTLHYSTcPELTsyadkLWWAGCLVAFLVKM 208
Cdd:PRK08667 146 SSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASA-GILS-----LVFLLLFLGFGIKA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 209 PLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRiiVMLDPLTKELSYPFIIL------ALWGIIMTgsicLRQTD 282
Cdd:PRK08667 220 GIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVR--FLMDVLSPELWWGVLILlagsisALLGVIYA----LKEHD 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 283 VKSLIAYSSVSHMGLVAGGILIQTPWGFTG-----------ALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQM 351
Cdd:PRK08667 294 LKGLLAYSSIENIGIILMGIGLYVIFGVYGldtlallalggALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVK 373
|
330 340 350
....*....|....*....|....*....|....*.
gi 642277079 352 ILPLMTAWWFIASLANLALPPLPNLMGELLIISSLF 387
Cdd:PRK08667 374 LMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
201-414 |
6.25e-17 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 82.88 E-value: 6.25e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 201 LVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVML--DPLTKELSYPFIILALWGIIMTGSICL 278
Cdd:PRK08676 213 FIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIFSIAVAAFSML 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 279 RQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTnYERTHSRTMVLARGLQMILPLMTA 358
Cdd:PRK08676 293 SQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGI-LHRQYRSDRFDRIFDVFRLQPVAA 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 642277079 359 WWFIA-SLANLALPPLPNLMGELLIISSLFMWTPWTIALTgLGTLITAGYSLYLFLM 414
Cdd:PRK08676 372 WGVILgSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAV-LLLLLLAASSFAIFLL 427
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-411 |
2.51e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 80.77 E-value: 2.51e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 91 NRQRTYISLLTSLQIFLIMAFGATEVILFYVMFEATLIPTLIIITrWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQN 170
Cdd:PRK07234 91 AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 171 TTGTLSMLTLhystcpeltSYADKLWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVM 250
Cdd:PRK07234 170 ANGTFAFSGL---------ATADPEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 251 LDPLTKELSYPFIILALWGIImtgsICLRQTDVKSLIAYSSVSHMGLVAGGILIqtpwgftgALILMIAHGLTSSALFCL 330
Cdd:PRK07234 241 VPGLDLIVRIFGVGTALLGVL----FALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLC 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 331 ANTNYERTHS--RTMVLARGLQMILplmtawwFIASLANLALPPLPNLMGELLIISSLFMWTPWTIALTGLGTLITAGYS 408
Cdd:PRK07234 309 AGALPSRNFTelISQMLGIGKWIPL-------TMASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNLAAVGTAASFWKF 381
|
...
gi 642277079 409 LYL 411
Cdd:PRK07234 382 IFL 384
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
97-386 |
6.90e-16 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 80.04 E-value: 6.90e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 97 ISLLTSLQIFLimafgATEVILFYVMFEATLIPTLIIITRwGNQTERLNAGTYFLFYTLaGSLPLLVALLLLQNTTGTLS 176
Cdd:PRK08668 106 MSLAGVLGVFL-----ANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVLSAI-GAYAMLYAIFLIYAKTGTFD 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 177 MLTLhYSTCPELTSYADKLWWAGCLVAF-LVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLdPLT 255
Cdd:PRK08668 179 FADI-SQGLINDTSTGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVL-PGT 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 256 KELS------------YPFIILALWGIIMTGSICLRQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLT 323
Cdd:PRK08668 257 KLFSefgtyrgvplfnYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALF 336
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 642277079 324 SSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLALPPLPNLMGELLIISSL 386
Cdd:PRK08668 337 KGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL 399
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
120-433 |
1.74e-15 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 78.45 E-value: 1.74e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 120 YVMFEATLIPTLIIITrWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTTGTLSMLTL-----HYSTCPELTSYADK 194
Cdd:PRK12663 134 YVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlnDMGDTATLTTIALL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 195 LwwagcLVAFLVKMPLYGVHlWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLDPLTKELSYPFIILALWGIIMTG 274
Cdd:PRK12663 213 F-----LLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIG 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 275 SI-CLRQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMIL 353
Cdd:PRK12663 287 ALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKE 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 354 PLMTAWWFIASLANLALPPLPNLMGELLIISSLFMWTPWTIALTGLGTLITAGYSLY-LFLMTQRGPLPPHIIALEPSHS 432
Cdd:PRK12663 367 PLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFrIFFLAYWGDKDGEEVNFKPIPL 446
|
.
gi 642277079 433 R 433
Cdd:PRK12663 447 Y 447
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-429 |
2.26e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 78.22 E-value: 2.26e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 119 FYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTTGTLSMLTLHYSTcPELTSYADKLWWA 198
Cdd:PRK08376 146 FFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKM-SENPTVVAKIALA 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 199 GCLVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLaaVLLKLGG-YGMMRIIVMLDPLT---KELSYPFIILALWGIIMTG 274
Cdd:PRK08376 225 LFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAinlATVGWVIIILGCLTMFVGV 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 275 SICLRQTDVKSLIAYSSVSHMG---------LVAGGILIQTPWGFT---GALILMIAHGLTSSALFCLANTNYERTHSRT 342
Cdd:PRK08376 303 AMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEIalaGGIYHIVNHALYKALLFLTAGAVIYETGTRN 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 343 MVLARGLQMILPLMTAWWFIASLANLALPPLPNLMGELLIISSLFMWTPWTIALTGLGT-LITAGYSLYLFLMTQRGPLP 421
Cdd:PRK08376 383 LNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSvLTLASFVKVFHTAFFGPPSE 462
|
....*...
gi 642277079 422 PHIIALEP 429
Cdd:PRK08376 463 KVMNVKEP 470
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-410 |
4.46e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 77.32 E-value: 4.46e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 109 MAFGATEVILFYVMFEATLIPTLIIITRwGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTTGTLSM--LTLHYSTCP 186
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMadLAVRLDELP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 187 ELTSYAdklWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLDPlTKELSYPFIILA 266
Cdd:PRK12665 205 SGTRTA---LFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLLMVVA 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 267 LWGIIMTGSICLRQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLA 346
Cdd:PRK12665 281 LLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRL 360
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 642277079 347 RGLQMILPLMTAWWFIASLaNLA-LPPLPNLMGEL-LIISSLFMWTPWTIALTGlGTLITAGYSLY 410
Cdd:PRK12665 361 GGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKVaLLEAGAEDGTWLAWALVA-GGVVTSLLTLY 424
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
105-411 |
3.57e-13 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 71.34 E-value: 3.57e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 105 IFLIMAFGATEVIL------FYVMFEATLIpTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTTGTLSML 178
Cdd:PRK08377 113 LFLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 179 TLHySTCPELTSYADKLWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLDPLTKEL 258
Cdd:PRK08377 192 HIA-QLAGTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 259 SYP--FIILALWGIIMTGSICLRQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYE 336
Cdd:PRK08377 271 SVLklVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGI 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 642277079 337 RTHSRTMVLARGLQMILPLMTAWWFIASLANLALPPLPNLMGEL-LIISSLFMWTPWTIALTGLGTLITAGYSLYL 411
Cdd:PRK08377 351 TLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFrIILAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-402 |
1.60e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 69.56 E-value: 1.60e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 214 HLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRiivmLDPLTKELSYPFIILALWG---IIMTGSICLRQTDVKSLIAY 289
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGgltMLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 290 SSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLA 369
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
170 180 190
....*....|....*....|....*....|...
gi 642277079 370 LPPLPNLMGELLIISSLFMWTPWTIALTGLGTL 402
Cdd:PRK12647 370 LPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
113-413 |
4.41e-12 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 68.53 E-value: 4.41e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 113 ATEVILFYVMFEATLIPTLIIITRWGNQTERLNAGTyfLFYTLAGSLPLLVALLLLQNTTGTLSMLTLHYSTcpeltSYA 192
Cdd:PRK12650 129 ADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQTGTTSLSGILHSD-----VWA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 193 DKLWWAGcLVAFLVKMPLYG------VHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI-IVMLDPLTkeLSYPFIIL 265
Cdd:PRK12650 202 EKPGLTT-VVAVLIAVAAFTksaqfpFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFsPVFHDVAV--WNWLLIIV 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 266 ALWGIIMTGSICLRQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVL 345
Cdd:PRK12650 279 GMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRR 358
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 642277079 346 ARGLQMILPLMTAWWFIASLANLALPPLPNLMGELLIISSlFMWTP---WTIAL----TGLGTLITAGYSLYLFL 413
Cdd:PRK12650 359 LGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTA-FLEAPggnAGVVLllvgAALGAVFTFAYSARLVL 432
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
208-387 |
1.70e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 66.45 E-value: 1.70e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 208 MPLygvHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLDPlTKELSYPFIILALWGIIMTGSI--CLRQTDVKS 285
Cdd:PRK06521 227 VPL---HVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLG-APGWWWGVLVLALGAISAVLGVlyALAEHDLKR 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 286 LIAYSSVSHMGLV-----------AGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMILP 354
Cdd:PRK06521 303 LLAYSTIENIGIIfvglglamvfiAYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMP 382
|
170 180 190
....*....|....*....|....*....|....
gi 642277079 355 lMTAWWF-IASLANLALPPLPNLMGELLIISSLF 387
Cdd:PRK06521 383 -WTAWAFlIGCLAISALPPLNGFVSEWLLLQSLL 415
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
198-402 |
2.05e-11 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 65.77 E-value: 2.05e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 198 AGCLVAFLVKMPLYGVHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRIIVMLDPLTKELSYPFIILALWGIIMTGSI 276
Cdd:PRK06525 211 LGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLM 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 277 CLRQTDVKSLIAYSSVSHMGLVAGGILIQ---TPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMIL 353
Cdd:PRK06525 290 YLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKL 369
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 642277079 354 PLMTAWWFIASLANLALPPLPNLMGELLIISSLFMWTPWTIALTGLGTL 402
Cdd:PRK06525 370 PLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-402 |
2.84e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 65.36 E-value: 2.84e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 201 LVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLDPLTKELSYPFI-ILALWGIIMtGSI-CL 278
Cdd:PRK07691 216 LFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLIlILALLTIIF-GVIgAV 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 279 RQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTA 358
Cdd:PRK07691 295 AYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGW 374
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 642277079 359 WWFIASLANLALPPLPNLMGELLIISSLF----MWTPWTIALTGLGTL 402
Cdd:PRK07691 375 MFFIAALSLAGIPPLSGFYGKFFIVEGTFeagfYVSGIIVLLSSLLVL 422
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
171-393 |
4.11e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 64.76 E-value: 4.11e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 171 TTGTLSMLTLHYSTCPELTSYADKLWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRII-- 248
Cdd:PRK12662 186 ITGTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVyd 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 249 ---VMLDPLTKELSYPFIILALWGIIMTGSICLRQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSS 325
Cdd:PRK12662 266 vfkANFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKS 345
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 642277079 326 ALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLALPPLPNLMGELLIISSLFMWTPWT 393
Cdd:PRK12662 346 ALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWI 413
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
214-424 |
4.78e-11 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 64.79 E-value: 4.78e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 214 HLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRIIVMLDpLTKELSYPFIILALWGIIMTGSICLRQTDVKSLIAYSSV 292
Cdd:COG1009 231 HFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFA-LSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTV 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 293 SHMGLVAGGILIQtpwGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLALPP 372
Cdd:COG1009 309 SQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPP 385
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 642277079 373 LPNLMGELLIISSLFMWTPWTIALTGLGTL---ITAGYSLYLFLMT----QRGPLPPHI 424
Cdd:COG1009 386 FAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLVffgkPRPKTPKHP 444
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
205-414 |
5.64e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 64.45 E-value: 5.64e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 205 LVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVM---LDPLTKEL--SYPFIILALWGIIMTGSICLR 279
Cdd:PRK06589 221 IAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifgLSYLQRIFaeFNWLIFIPIVSIFYSSLKALK 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 280 QTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAW 359
Cdd:PRK06589 301 TDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFI 380
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 642277079 360 WFIASLANLALPPLPNLMGELLIISSLF----MWTPWTIALTGLGTLITAgySLYLFLM 414
Cdd:PRK06589 381 ISISSLSLIGIPIFSGFISKFLILLAASeqnqPWLSIIVMLVVIASSILS--ALYLLKI 437
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
17-409 |
1.57e-10 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 62.83 E-value: 1.57e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 17 FSSPKWLWPTSLLHSIAIAVASLTWLKNTSETGWSSLNTMLATDSLSTPLLVLTCWLLPLMILASQSHTAQEPINRQRTY 96
Cdd:COG1007 26 FLPRRSRRLLAGLALLGLLLALALLLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFY 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 97 ISLLTSLQIFLIMAfGATEVILFYVMFEATLIPTLIIITRWGNQTERLNAGT-YF---------------LFYTLAGSLP 160
Cdd:COG1007 106 ALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFllgalssgfllygisLLYGATGSLN 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 161 LLVALLLLQNTTGTLSMLTLhystcpeltsyadklwwaGC---LVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLl 237
Cdd:COG1007 185 LAGIAAALAAGGANSPLLLL------------------GLvlvLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP- 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 238 KLGGYGM-MRIIVM-LDPLTKELSYPFIILALwgIIMT-GSIC-LRQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGA 313
Cdd:COG1007 246 KIAAFAAlLRLLVEaFPGLAADWQLLLAVLAV--LSMTvGNLAaLAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAA 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 314 LILMIAHGLTSSALF-CLANTNYERTHSRTMVLARGLQMILPLMtAWWFIASLANLA-LPPLPNLMGELLIISSLFMWTP 391
Cdd:COG1007 324 LFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLL-ALAMTIFLLSLAgIPPTAGFFGKFYVFSAAVEAGL 402
|
410
....*....|....*....
gi 642277079 392 WTIALTG-LGTLITAGYSL 409
Cdd:COG1007 403 YWLAVIAvLNSVISAYYYL 421
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
173-387 |
4.63e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 61.77 E-value: 4.63e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 173 GTLSMLTLHYSTcpELTSYADKLWWAGcLVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLD 252
Cdd:PRK08042 162 GTLDLRLLDMRM--QQLPLGSDIWLLG-VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGG 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 253 PLTKELSYPFIILALWGIIMTGSICLRQTDVKSLIAYSSVSHMGLV-----AG--GILIQTP----WGFTGALILMIAHG 321
Cdd:PRK08042 239 NAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgAGvtGIALEQPaliaLGLVGGLYHLLNHS 318
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 642277079 322 LTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLALPPLPNLMGELLIISSLF 387
Cdd:PRK08042 319 LFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFF 384
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
97-345 |
1.46e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 59.55 E-value: 1.46e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 97 ISLLTSLqIFLIMAFGATEVILFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTTGTLS 176
Cdd:MTH00062 75 FFLFLSL-IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 177 MLTLHYSTCPELTSYadklwWAGCLVaFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIVMLDPLTK 256
Cdd:MTH00062 154 FSDWGSDDSVSLIVY-----YVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 257 eLSYPFIILALWGIIMTGSicLRQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYE 336
Cdd:MTH00062 228 -LGYLFLCCLFSVFFLITA--CSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYE 304
|
....*....
gi 642277079 337 RTHSRTMVL 345
Cdd:MTH00062 305 VSGSRNWVL 313
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
201-328 |
8.50e-09 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 57.52 E-value: 8.50e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 201 LVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM-MRIIVM-LDPLTKELSYPFIILALWGIIMTGSICL 278
Cdd:PRK05777 211 LVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLLVVaFGGLSEDWQQVLAIIAIASMLVGNLAAL 289
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 642277079 279 RQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALF 328
Cdd:PRK05777 290 SQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
113-420 |
1.38e-08 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 57.07 E-value: 1.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 113 ATEVILFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTTGTlsmltlhySTCPELTSYA 192
Cdd:PRK12646 129 SDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGT--------NNITEILGQA 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 193 DKL----WWAGCLVAFLV----KMPLYGVHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRIIVMLDpLTKELSYPFI 263
Cdd:PRK12646 201 DHIknhgLFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG-LSNMYIYIVT 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 264 ILALWGIIMTGSICLRQTDVKSLIAYSSVSHMGLVA-----GGILIQTPWG---------FTGALILMIAHGLTSSALFC 329
Cdd:PRK12646 279 FVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMamvgiGGGYAQHQQDaiasiyvfvLFAALFHLMNHAIFKCALFM 358
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 330 LANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLALPPLPNLMGELLIISSL----------FMWTPWTIALTGL 399
Cdd:PRK12646 359 GVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALtqtgqlsqfsLISMIIIVFIGVI 438
|
330 340
....*....|....*....|.
gi 642277079 400 GTLITAGYSLYLFLMTQRGPL 420
Cdd:PRK12646 439 ASIFTFTYALYMVKEVFWGKY 459
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
201-409 |
8.02e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 54.57 E-value: 8.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 201 LVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIV-MLDPLTKELSYPFIILALWGIIMTGSICLR 279
Cdd:TIGR01770 210 LVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLyILFGFSEAWQIFLAIIAFLSMLIGNFGALA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 280 QTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALF-CLANT-NYERTHSRTMVLARGLQMILPLMT 357
Cdd:TIGR01770 290 QKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgVLSLLrSYKDEWIEYISDFAGLFKTNPILA 369
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 642277079 358 AWWFIASLANLALPPLPNLMGELLIISSLFMWTPWTIALTG-LGTLITAGYSL 409
Cdd:TIGR01770 370 ILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAvLTSVIGAFYYL 422
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
94-411 |
9.13e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 54.45 E-value: 9.13e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 94 RTYISLLTSLQIFLIMAFGATEVILFyVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTTG 173
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 174 TLSMLTLHYSTCPELTSYADKLWWAGCLVAFL------VKMPLYgvhLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMR 246
Cdd:PRK12649 191 TYDIATILQDSELIENIKGHPLFLITLILIFIgaaaksAQGPFY---IWLPNA-MEAPTPVSAFLhSATMVKAGVYLVAR 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 247 IivmlDPLTKELSYPFIILALWGII---MTGSICLRQTDVKSLIAYSSVS---HMGLVAGGILIQTP-WGFTGALILMIA 319
Cdd:PRK12649 267 I----HPIFSGTEAWFILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISqlaYLMTMYGYTTYHEPgLGVAAATFHLLN 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 320 HGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANLALPPLPNLMG-ELLIISSLFMWT----PWTI 394
Cdd:PRK12649 343 HATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSkEMFYETSVEMGAliggPFTI 422
|
330 340
....*....|....*....|
gi 642277079 395 ---ALTGLGTLITAGYSLYL 411
Cdd:PRK12649 423 iipAVAVLGGVFTFAYSIKL 442
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
201-410 |
1.81e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 53.77 E-value: 1.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 201 LVAFLVKMPLYGVHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYgmmrIIVMLDPLTKELS---YPFIILALWGIIMTGSI 276
Cdd:PRK12644 210 LVGALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIY----LVARLAPGFADVPvwrPTVLVLGLATMLLGGWR 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 277 CLRQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLM 356
Cdd:PRK12644 285 ALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVL 364
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 357 TAWWFIASLANLALPPLPNLMGE------LLIISSLFMWTPWTIALTGLGTLITAGYSLY 410
Cdd:PRK12644 365 AVVAALAAASMAGLPPLLGFVAKeaaleaVLHDGALGPAGPVVLAGIVLGSILTVAYSLR 424
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
138-403 |
2.81e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 49.46 E-value: 2.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 138 GNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTTGTLSMLTLHySTCPELTSYADKLWWAGC---LVAFLVKMPLYGVH 214
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLA-QRIAQLPAADRALLEAGAallLVVFLIKAAMWPLN 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 215 LWLPKAHVEA--PIAGsmvLAAVLLKLGGYGMMRIIVMLDPLTKELSYPFIILALWGI----IMTGSI-CLRQTDVKSLI 287
Cdd:PRK12666 231 FWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGglatLAFGAIgVLAAQRLRRLA 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 288 AYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTnYERTHSRTM-VLARGLQMILPLMTAW------- 359
Cdd:PRK12666 308 AYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADL-VERQRGAAAdRLAVTPELYDLDEEEEeevgvai 386
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 642277079 360 ----------WFIASLANLALPPLPNLMGELLIISSLF-------MWTPWTIAL-TGLGTLI 403
Cdd:PRK12666 387 patmallgllFFICALALAGLPPLSGFLGKFALLQALLnppgagaAWWLWALVLlSGLAALI 448
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
263-385 |
3.88e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 49.26 E-value: 3.88e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 263 IILALWGIIMTGSICLRQTDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRT 342
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 642277079 343 MVLARGLQMILPLMTAWWFIASLANLALPPLPNLMGELLIISS 385
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQA 392
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
57-383 |
4.37e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 49.19 E-value: 4.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 57 LATDSLSTPLLVLTCWLLPLMILASQSHTAQEP-INRQRTYISLLTSLQIFLIMAfgaTEVILFYVMFEATLIPTLIIIT 135
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYLSLFTFLMMVLVTS---DNYLQLFIGWEGVGVCSYLLVA 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 136 RWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTTGTLSMLTL-------------HYSTCPELTSYADklwWAGCLV 202
Cdd:MTH00032 153 FWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgsgimdrgYYGGGAYESPLAP---FAIIGI 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 203 AFLV----KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIvmldPLTKELSYPFIILALWGII---MTGS 275
Cdd:MTH00032 230 LLLIgcigKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAAT 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 276 ICLRQTDVKSLIAYSSVSHMGLVAggILIQTPWGFTGALILMIAHGLTSSALFCLA-----NTNYERTHSRTMvlaRGLQ 350
Cdd:MTH00032 306 VGLVQNDLKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLI 380
|
330 340 350
....*....|....*....|....*....|...
gi 642277079 351 MILPLMTAWWFIASLANLALPPLPNLMGELLII 383
Cdd:MTH00032 381 HSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
202-406 |
4.95e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 48.49 E-value: 4.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 202 VAFLVKMPLYGVHLWLPKAHVEAPiagsMVLAAVLLKLGGYGMMRIIVMLDPLTKELsypfIILALWGIIMTGSICLRQT 281
Cdd:MTH00196 103 VALLFKLSVAPFHMWAPDVYEGAP----TKTTALLAIVPKLGIFSILVSIGLNVNIL----LIGGLFSLFVGAIGALNQT 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 282 DVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLA---NTNYErthsrTMVLARGLQMILPLMTA 358
Cdd:MTH00196 175 KIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIIlalNVYKN-----LIIEFSGLSRRLPILAI 249
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 642277079 359 WWFIASLANLALPPLPNLMGELLIISSLFMWTPWTIALTGLGTLITAG 406
Cdd:MTH00196 250 TLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAG 297
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
204-388 |
3.61e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 46.32 E-value: 3.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 204 FLVKMPLYGVHL--WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIvMLDPLTKELSYPFIILALWGI-IMTGSICLRQ 280
Cdd:PRK06459 168 FIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMT-ILTQTIPIGYFGLTILAIGAFsILFGALYAYV 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 281 TD-VKSLIAYSSVSHMG--LVAGGILIQTPWGFT--------GALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGL 349
Cdd:PRK06459 247 SEnVKGLLAFSTIENNGaiLVALGLYMVTKQLITsiehfsliTVILYSFAHSVAKTGLFLSSGLQEKQSITYSKKIRNRW 326
|
170 180 190
....*....|....*....|....*....|....*....
gi 642277079 350 QMILPLMTAwwfiASLAnlALPPLPNLMGELLIISSLFM 388
Cdd:PRK06459 327 IELGLTLLA----SSLS--GLLPNIGGVASWLLLESLFM 359
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
201-414 |
7.80e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 41.41 E-value: 7.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 201 LVAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGMMriiVMLDPLTkELSYPFIILALWGIIMTGSICLRQ 280
Cdd:MTH00144 91 LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLL---SNFLDLY-WLAYLLCVISVLSALVGSIGGLNQ 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 281 TDVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTssaLFCLANTNYerthSRTMVLARGLQMILPLMTAWW 360
Cdd:MTH00144 166 TQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFL---FFSLWSGDS----GSMKDLGSLKPSYKTGLSIIS 238
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 642277079 361 FIASLAnlALPPLPNLMGELLIISSLFMWTPW-TIALTGLGTLITAGYSLYLFLM 414
Cdd:MTH00144 239 LLLSLG--GLPPFLGFCSKLLVLISSMESSPLlLILLLLLGSLISLFFYLSVFFS 291
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
212-415 |
8.74e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 41.60 E-value: 8.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 212 GVHLWLPKAH-----VEAPI-AGSMVLAAVLLklggygmmriIVMLDPLTKELSYPFIILALWG---IIMTGSICLRQTD 282
Cdd:MTH00020 228 GLHTWLPDAMegptpVSALIhAATMVTAGVFL----------LIRSSPLFEQAPLALIIVTIVGsltVFFAATVGLVQND 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 283 VKSLIAYSSVSHMG--LVAGGIliqtpWGFTGALILMIAHGLTSSALFCLANTN-YERTHSRTMVLARGLQMILPLMTAW 359
Cdd:MTH00020 298 LKKVIAYSTCSQLGymVVACGL-----SHYSISLFHLMNHAFFKALLFLSAGSViHALSDEQDMRKMGGLISFLPLTYIF 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 642277079 360 WFIASLANLALPPLPNLMGELLIISSLFMWTPWTIA--LTGLGTLITAGYSLYLFLMT 415
Cdd:MTH00020 373 FLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAywLGCFSALLTAFYSIRLIYLT 430
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
214-396 |
1.78e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 40.66 E-value: 1.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 214 HLWLPKAhVEAPIAGSMVLAAVLLKLGGYgmmrIIVMLDPLTkELSyPFIILALWGI-----IMTGSICLRQTDVKSLIA 288
Cdd:PRK07390 241 HLWLDEA-MEGPNPASILRNSVVVATGAW----VLIKLQPVL-ALS-PVALTVLIVIgtvtaIGASLVAIAQIDIKRALS 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 289 YSSVSHMGLVAGGILIQTPwgfTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMILPLMTAWWFIASLANL 368
Cdd:PRK07390 314 YSTSAYLGLVFIAVGLQQP---DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLV 390
|
170 180
....*....|....*....|....*...
gi 642277079 369 ALPPLPNLMGELLIISSLFMWTPWTIAL 396
Cdd:PRK07390 391 ALLPLGGFWALLRLADGLWAVSPWLVGV 418
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
172-413 |
1.87e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 40.45 E-value: 1.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 172 TGTLSMLTLHYSTCPELTSyadkLWWAGCLVAF--LVKMPLYGVHLWLPKAhVEAPIAGSMVLAAVLLKLGGYGMMRIIv 249
Cdd:PRK08168 180 SLSLSALWAHLAAQGASPS----LQAAALLLVLavILKTAQLPVHGWLIQV-MEAPTPVSALLHAGVVNLGGFVLIRFA- 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 250 mldPLTKELSYPFIILALWGIIMT---GSICLRQTDVKSLIAYSSVSHMGLvaggILIQTPWG-FTGALILMIAHGLTSS 325
Cdd:PRK08168 254 ---PLLEQAPPARWLLVLVGLATAvlaGLVMLTRISIKVRLAWSTVAQMGF----MLLECGLGlYELALLHLVAHSLYKA 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 326 ALFCLANTNYERTHSRTM-----------VLARGLQMI--LPLMTAWWFIASLANLALPPLPNLMGELLIISSLFMWTPW 392
Cdd:PRK08168 327 HAFLSASEAVRDTRLRRLqgpqsaagvvsLLLAPLLSAalVLLLQSLLPLGAWPWWWSAVLALAWAPLLWQPCASGASTL 406
|
250 260
....*....|....*....|.
gi 642277079 393 TIALTGLGTLitAGYSLYLFL 413
Cdd:PRK08168 407 SGLGLGLLLV--AGLTALAFL 425
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
199-415 |
2.43e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 40.32 E-value: 2.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 199 GCLVAFLVKMPLYGVHLWLPKAhVEAPIAGS-------MVLAAVLLklggygMMRIIVMLDPLTKELSYPFIILALwGII 271
Cdd:MTH00211 209 GLLLAAMGKSAQFGFHPWLPSA-MEGPTPVSallhsstMVVAGVFL------LIRLSPLFQNNQLILGAVLLLGAL-TML 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 272 MTGSICLRQTDVKSLIAYSSVSHMGLVAGGILIQTPW---------GFTGALILM----IAHGLTSSALFclantnyert 338
Cdd:MTH00211 281 FGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQlaflhicthAFFKAMLFMcsgsIIHGLNNEQDI---------- 350
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 642277079 339 hsRTMvlaRGLQMILPLMTAWWFIASLANLALPPLPNLMGELLIISSLFMWTP--WTIALTGLGTLITAGYSLYLFLMT 415
Cdd:MTH00211 351 --RKM---GGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLnaWALLLTLLATSLTAAYSFRLIFLS 424
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
201-427 |
7.30e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 38.22 E-value: 7.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 201 LVAFLVKMPLYGVHLWLPkaHVEAPIAGSMVLAavllkLGGYGMMRIIVMLDPLTKELSYPFII-LALWGIIMTGSICLR 279
Cdd:MTH00011 95 LVSLMLKLGMAPCHFWFP--SVMSSISWTLCLI-----LSTWQKIAPLSILFFFTSHNILPMMTsMAAMSALAGGLGGMN 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 280 QTDVKSLIAYSSVSHMGLVAggiLIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGlqmilPLMTAW 359
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMT---MISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMS-----QTTSMS 239
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 642277079 360 WFIASLANLALPPLPNLMGELLIISSLFMWTPWTIALTgLGTLITAGYSLYLFLMTQRGPLPPHIIAL 427
Cdd:MTH00011 240 LFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLV-LIVGSLMNLFYYLNLIFNFMYLSPTFSSL 306
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
202-318 |
7.31e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 38.46 E-value: 7.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642277079 202 VAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVllklGGYGMMRIIVMLDPLTKELsypfIILALWGIIMTGSICLRQT 281
Cdd:MTH00199 198 ISLLFKLSAAPFHMWAPDVYEGAPTITTALLATV----PKIGVFSILVQIGPVTNVV----LICAVLSIIYGAIGALNQT 269
|
90 100 110
....*....|....*....|....*....|....*..
gi 642277079 282 DVKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMI 318
Cdd:MTH00199 270 KIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMI 306
|
|
| |
