|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-445 |
2.03e-156 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 449.99 E-value: 2.03e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 1 MMKFLMMMIFTIPLCFLNNMFWMVQMVLLLMMFMFMNLNMNIMNFCNLSYMMGCDMISYGLILLSIWICLLMIMASENLN 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 81 KLNFYINFFLFNIIILLIMLYMTFSVMNLFLFYLFFEGSLIPTLMLIIGWGYQPERIQAGMYLLFYTLFASLPMLMGIFF 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 161 IFSNYNCMIMYFFKFLNENFFLLYLSMILAFLVKMPMYFVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILILFQK 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 241 INMKYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYSSVAHMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNI 320
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 321 NYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAAPPSMNLMGEISLINSIVSWSYLSMISLIMISFFSAGYSLYLYS 400
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 674840501 401 YTQHGKYNMSIYSFYGGISREYLLLMLHWLPLNLLILKIDFFMIW 445
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
48-446 |
9.03e-126 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 371.09 E-value: 9.03e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 48 LSYMMGCDMISYGLILLSIWICLLMIMASENLNKLNFYINFFLFNIIILLIMLYMTFSVMNLFLFYLFFEGSLIPTLMLI 127
Cdd:MTH00150 16 LSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 128 IGWGYQPERIQAGMYLLFYTLFASLPMLMGIFFIFSNYNCMIMYFFKFLNENFF---LLYLSMILAFLVKMPMYFVHLWL 204
Cdd:MTH00150 96 LGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSsmgLWGLLVFLAFLVKLPMYPFHLWL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 205 PKAHVEAPVSGSMILAGIMLKLGGYGLLRILILFQKINMKYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYSSVAHMSL 284
Cdd:MTH00150 176 PKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSL 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 285 VICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAAPPSMNLM 364
Cdd:MTH00150 256 VLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLL 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 365 GEISLINSIVSWSYLSMISLIMISFFSAGYSLYLYSYTQHGKYNMSIYSFYGGISREYLLLMLHWLPLNLLILKIDFFMI 444
Cdd:MTH00150 336 SEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLLFM 415
|
..
gi 674840501 445 WF 446
Cdd:MTH00150 416 WI 417
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-445 |
3.45e-115 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 345.19 E-value: 3.45e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 1 MMKFLMMMIFTIPLCFLNNMF-WMVQMVLLLMMFMFMNLNMNIMN--FCNLSYMMGCDMISYGLILLSIWICLLMIMASE 77
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWsWALTFSTLLLLSLFTLLNLYPMSapYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 78 NLNKLNFYINFFLFNIIILLIMLYMTFSVMNLFLFYLFFEGSLIPTLMLIIGWGYQPERIQAGMYLLFYTLFASLPMLMG 157
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 158 IFFIFSNYNCMIMYFFKFLNENFFLL---YLSMILAFLVKMPMYFVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRI 234
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSSMEPPSIYLMnlwWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 235 LILFQKINMKYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYSSVAHMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGM 314
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 315 FCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAAPPSMNLMGEISLINSIVSWSYLSMISLIMISFFSAGY 394
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 674840501 395 SLYLYSYTQHGKYNMSIYSFYGGISREYLLLMLHWLPLNLLILKIDFFMIW 445
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNW 451
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
2-444 |
4.53e-114 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 342.34 E-value: 4.53e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 2 MKFLMMMIFTIPLCFLNNMFW--MVQMVLLLMMFMFMNLNMNIMNFCNLSYMMGCDMISYGLILLSIWICLLMIMASENL 79
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWsfFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 80 NKLNFYINFFLFNIIILLIMLYMTFSVMNLFLFYLFFEGSLIPTLMLIIGWGYQPERIQAGMYLLFYTLFASLPMLMGIF 159
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 160 FIFSNYNCMIMYFFKFLNENFFLLYLSMI---LAFLVKMPMYFVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILI 236
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFYLFLYWIflmLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 237 LFQKINMKYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYSSVAHMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFC 316
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 317 LVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAAPPSMNLMGEISLINSIVSWSYLSMISLIMISFFSAGYSL 396
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 674840501 397 YLYSYTQHGKYNMSIYSFYGGISREYLLLMLHWLPLNLLILKIDFFMI 444
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFIC 448
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
47-438 |
1.00e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 336.40 E-value: 1.00e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 47 NLSYMMGCDMISYGLILLSIWICLLMIMASENLNKLNFYIN--FFLFNIIILLIMLYMTFSVMNLFLFYLFFEGSLIPTL 124
Cdd:MTH00124 51 NLTQWLGIDQISAPLLVLSCWLLPLMILASQNHLQHEPLQRkrTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTL 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 125 MLIIGWGYQPERIQAGMYLLFYTLFASLPMLMGIFFIFSNYNCMIMYFFKFLNENF------FLLYLSMILAFLVKMPMY 198
Cdd:MTH00124 131 ILITRWGNQPERLSAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMLQLTHPTLtnswtnLLLWLACLMAFMVKMPLY 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 199 FVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILILFQKINMKYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYSS 278
Cdd:MTH00124 211 GLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 279 VAHMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAAP 358
Cdd:MTH00124 291 VSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALP 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 359 PSMNLMGEISLINSIVSWSYLSMISLIMISFFSAGYSLYLYSYTQHGKYNMSIYSFYGGISREYLLLMLHWLPLNLLILK 438
Cdd:MTH00124 371 PTINLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILK 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
44-437 |
3.94e-103 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 314.61 E-value: 3.94e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 44 NFCNLSYMMGCDMISYGLILLSIWICLLMIMASENLNKLNFYIN--FFLFNIIILLIMLYMTFSVMNLFLFYLFFEGSLI 121
Cdd:MTH00044 49 SWHNLSLSLATDSLSSPLIILSCWLAPLSLLASINHLSNNSPNNqrTFISLIIIILTALIITFSSLELILFYIAFETTLI 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 122 PTLMLIIGWGYQPERIQAGMYLLFYTLFASLPMLMGIFFIFSNYNCMIMYFFKFLNENFFLLYLS------MILAFLVKM 195
Cdd:MTH00044 129 PTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSsiwwifCILAFLVKM 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 196 PMYFVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILILFQKINMKY-NLIWMIISLLGGLYISLNCFCQVDMKSLI 274
Cdd:MTH00044 209 PIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFSLPSANNiSFILIVFCCWGALITSIICLRQTDLKALI 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 275 AYSSVAHMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSN 354
Cdd:MTH00044 289 AYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAAN 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 355 MAAPPSMNLMGEISLINSIVSWSYLSMISLIMISFFSAGYSLYLYSYTQHGKYNMSIYSFYGGISREYLLLMLHWLPLNL 434
Cdd:MTH00044 369 LGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLIL 448
|
...
gi 674840501 435 LIL 437
Cdd:MTH00044 449 III 451
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
43-446 |
1.66e-101 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 310.31 E-value: 1.66e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 43 MNFCNlsYMMGCDMISYGLILLSIWICLLMIMASENLNKLNFYIN--FFLFNIIILLIMLYMTFSVMNLFLFYLFFEGSL 120
Cdd:MTH00068 49 MNFTN--KYFGIDQISSPLLILTCWLLPLMILASQNHLKNEPINRqrTYISMLIILQLTLILAFSATELILFYIFFEATL 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 121 IPTLMLIIGWGYQPERIQAGMYLLFYTLFASLPMLMGIFFIFSNYNCMIMYFFKFLNENFFLLYLSMI------LAFLVK 194
Cdd:MTH00068 127 IPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIwwlaclLAFMVK 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 195 MPMYFVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILILFQKINMKYNLIWMIISLLGGLYISLNCFCQVDMKSLI 274
Cdd:MTH00068 207 MPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLI 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 275 AYSSVAHMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSN 354
Cdd:MTH00068 287 AYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSN 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 355 MAAPPSMNLMGEISLINSIVSWSYLSMISLIMISFFSAGYSLYLYSYTQHGKYNMSIYSFYGGISREYLLLMLHWLPLNL 434
Cdd:MTH00068 367 MALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLL 446
|
410
....*....|..
gi 674840501 435 LILKIDFFMIWF 446
Cdd:MTH00068 447 LILKPELISGMF 458
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-421 |
1.92e-95 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 294.88 E-value: 1.92e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 1 MMKFLMMMIFTIPLCFL--NNMFWMVQMV--LLLMMFMFMNLNMNIMNFCNLSYMMGCDMISYGLILLSIWICLLMIMAS 76
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLskNNMIWINTTTysLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 77 ------ENLNKLNFYINFflfnIIILLIMLYMTFSVMNLFLFYLFFEGSLIPTLMLIIGWGYQPERIQAGMYLLFYTLFA 150
Cdd:MTH00110 81 qhhlskEPLTRKKLYITM----LILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 151 SLPMLMGIFFIFSNYNCMIMYFFKFLNENFF------LLYLSMILAFLVKMPMYFVHLWLPKAHVEAPVSGSMILAGIML 224
Cdd:MTH00110 157 SLPLLVALLYIQNNLGSLNFLLLQLWAQPLPnswsnnLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 225 KLGGYGLLRILILFQKINMKYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYSSVAHMSLVICGIMTMNYWGYLGSYVMM 304
Cdd:MTH00110 237 KLGGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALM 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 305 IGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAAPPSMNLMGEISLINSIVSWSYLSMISL 384
Cdd:MTH00110 317 IAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILM 396
|
410 420 430
....*....|....*....|....*....|....*..
gi 674840501 385 IMISFFSAGYSLYLYSYTQHGKYNMSIYSFYGGISRE 421
Cdd:MTH00110 397 GLNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRE 433
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
1-442 |
1.14e-94 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 292.61 E-value: 1.14e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 1 MMKFLMMMIFTIPLCFLNNMFWM---VQMVLLLMMFMFMNLNMNIMNFCNLSYMMGCDMISYGLILLSIWICLLMIMASE 77
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRsttFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 78 NLNKLN--FYINFFLFNIIILLIMLYMTFSVMNLFLFYLFFEGSLIPTLMLIIGWGYQPERIQAGMYLLFYTLFASLPML 155
Cdd:MTH00206 81 NHMKNEpiNRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 156 MGIFFI---FSNYNCMIMYFFKFLNENFFLLYLSMILAFLVKMPMYFVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLL 232
Cdd:MTH00206 161 IALLFLqnsLGSLSLYILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 233 RILILFQKINMKYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYSSVAHMSLVICGIMTMNYWGYLGSYVMMIGHGLCSS 312
Cdd:MTH00206 241 RIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 313 GMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAAPPSMNLMGEISLINSIVSWSYLSMISLIMISFFSA 392
Cdd:MTH00206 321 ALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTA 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 674840501 393 GYSLYLYSYTQHGKYNMSIYSFYGGISREYLLLMLHWLPLNLLILKIDFF 442
Cdd:MTH00206 401 IYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
47-438 |
9.00e-84 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 264.90 E-value: 9.00e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 47 NLSYMMGCDMISYGLILLSIWICLLMIMASEN------LNKLNFYINFflfnIIILLIMLYMTFSVMNLFLFYLFFEGSL 120
Cdd:MTH00127 52 SLNLYMATDPLSTPLLVLTCWLLPLMILASQNhtapepINRQRMYITL----LTSLQIFLILAFGATEIIMFYVMFEATL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 121 IPTLMLIIGWGYQPERIQAGMYLLFYTLFASLPMLMGIFFIFSNYNCMIMYFFKFLNENFFLLYLSMI------LAFLVK 194
Cdd:MTH00127 128 IPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLwwagclLAFLVK 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 195 MPMYFVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILILFQKINMKYNLIWMIISLLGGLYISLNCFCQVDMKSLI 274
Cdd:MTH00127 208 MPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLI 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 275 AYSSVAHMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSN 354
Cdd:MTH00127 288 AYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLAN 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 355 MAAPPSMNLMGEISLINSIVSWSYLSMISLIMISFFSAGYSLYLYSYTQHGKYNMSIYSFYGGISREYLLLMLHWLPLNL 434
Cdd:MTH00127 368 LALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLL 447
|
....
gi 674840501 435 LILK 438
Cdd:MTH00127 448 LILK 451
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
47-408 |
5.03e-69 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 226.89 E-value: 5.03e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 47 NLSYMMGCDMISYGLILLSIWICLLMIMASENLNKLNfyINFFLFNIIILLIMLYMTFSVMNLFLFYLFFEGSLIPTLML 126
Cdd:COG1008 73 GISYHLGVDGISLPLVLLTALLTPLAILASWNEIKKR--PKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 127 IIGWGYqPERIQAGMYLLFYTLFASLPMLMGIFFIFSNYNCMIMYFFKFLNENF-----FLLYLSMILAFLVKMPMYFVH 201
Cdd:COG1008 151 IGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLpltaqLLLFLAFFIAFAVKVPMFPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 202 LWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILI-LFQKINMKYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYSSVA 280
Cdd:COG1008 230 TWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALpLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 281 HMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAAPPS 360
Cdd:COG1008 310 HMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGT 389
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 674840501 361 MNLMGEISLINSIVS----WSYLSMISLImisfFSAGYSLYLYSYTQHGKYN 408
Cdd:COG1008 390 SGFVGEFLVLLGAFQvnpwLAILAALGLI----LTAAYLLWMYQRVFFGPLK 437
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
47-399 |
5.11e-63 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 211.60 E-value: 5.11e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 47 NLSYMMGCDMISYGLILLSIWICLLMIMASENLNKLnfYINFFLFNIIILLIMLYMTFSVMNLFLFYLFFEGSLIPTLML 126
Cdd:PRK05846 73 GISYHLGVDGISLLLVVLTALLTPLAVLASWEEIKK--RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 127 IIGWGYqPERIQAGMYLLFYTLFASLPMLMGIFFIFSNYNCMIMYF-------FKFLNENFFLLYLSMILAFLVKMPMYF 199
Cdd:PRK05846 151 IGVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYYNATGTFdiadllnLPLPPGVQYWLFLAFFIAFAVKMPMFP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 200 VHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILI-LFQKINMKYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYSS 278
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLpLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 279 VAHMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAAP 358
Cdd:PRK05846 310 ISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLP 389
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 674840501 359 PSMNLMGEISLInsIVSWSYLSMISLIMIS--FFSAGYSLYLY 399
Cdd:PRK05846 390 GTSGFVGEFLIL--LGSFQVNPVIAFIATTglILAAVYSLWLY 430
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
53-399 |
3.35e-61 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 206.44 E-value: 3.35e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 53 GCDMISYGLILLSIWICLLMIMASenLNKLNFYINFFLFNIIILLIMLYMTFSVMNLFLFYLFFEGSLIPTLMLIIGWGY 132
Cdd:MTH00217 77 AVDGISIFFLILTALLTPICILIS--WNSIKFLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 133 QPERIQAGMYLLFYTLFASLPMLMGIFFIFSNY---NCMIMYFFKFLNENFFLLYLSMILAFLVKMPMYFVHLWLPKAHV 209
Cdd:MTH00217 155 REEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAgttDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHV 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 210 EAPVSGSMILAGIMLKLGGYGLLRI-LILFQKINMKYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYSSVAHMSLVICG 288
Cdd:MTH00217 235 EAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLG 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 289 IMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAAPPSMNLMGEIS 368
Cdd:MTH00217 315 IFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFL 394
|
330 340 350
....*....|....*....|....*....|.
gi 674840501 369 LINSIVSWSYLSMISLIMISFFSAGYSLYLY 399
Cdd:MTH00217 395 SLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
55-399 |
2.47e-59 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 201.45 E-value: 2.47e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 55 DMISYGLILLSIWICLLMIMASenLNKLNFYINFFLFNIIILLIMLYMTFSVMNLFLFYLFFEGSLIPTLMLIIGWGYQP 134
Cdd:MTH00204 82 DGVSLFFILLTTLLIPICILIS--WKSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSRE 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 135 ERIQAGMYLLFYTLFASLPMLMGIFFIFSNY---NCMIMYFFKFLNENFFLLYLSMILAFLVKMPMYFVHLWLPKAHVEA 211
Cdd:MTH00204 160 EKVRASYYFFFYTFAGSVFMLLGIFQLYSITgttDYQILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 212 PVSGSMILAGIMLKLGGYGLLRI-LILFQKINMKYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYSSVAHMSLVICGIM 290
Cdd:MTH00204 240 PVAGSVILAGILLKLGGYGFLRFsWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLF 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 291 TMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAAPPSMNLMGEISLI 370
Cdd:MTH00204 320 THTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSL 399
|
330 340
....*....|....*....|....*....
gi 674840501 371 NSIVSWSYLSMISLIMISFFSAGYSLYLY 399
Cdd:MTH00204 400 LAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
47-399 |
4.02e-59 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 200.94 E-value: 4.02e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 47 NLSYMMGCDMISYGLILLSIWICLLMIMASenLNKLNFYINFFLFNIIILLIMLYMTFSVMNLFLFYLFFEGSLIPTLML 126
Cdd:TIGR01972 68 GISYHLGVDGISLLLVLLTALLTLLAILAS--WESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 127 IIGWGyQPERIQAGMYLLFYTLFASLPMLMGI----FFIFSNYNCMIMYFFKFLNENFFLLYLSMILAFLVKMPMYFVHL 202
Cdd:TIGR01972 146 IGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAIlglyFLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 203 WLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILI-LFQKINMKYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYSSVAH 281
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLpLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 282 MSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAAPPSM 361
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
330 340 350
....*....|....*....|....*....|....*...
gi 674840501 362 NLMGEISLINSIVSWSYLSMISLIMISFFSAGYSLYLY 399
Cdd:TIGR01972 385 GFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
107-392 |
1.72e-56 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 188.68 E-value: 1.72e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 107 MNLFLFYLFFEGSLIPTLMLIIGWGYQPERIQAGMYLLFYTLFASLPMLMGIFFIFSNYNC-----MIMYFFKFLNEN-F 180
Cdd:pfam00361 2 NDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTlsfdeLSKALTGGLNSSgL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 181 FLLYLSMILAFLVKMPMYFVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILILFQKINMKYNLIWMIISLLGGLYI 260
Cdd:pfam00361 82 LLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 261 SLNCFCQVDMKSLIAYSSVAHMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLV-NINYERLQSRSLYMNKGMMNF 339
Cdd:pfam00361 162 SLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAKT 241
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 674840501 340 MPSMSLWWFLLMSSNMAAPPSMNLMGEISLINSIVSWsylSMISLIMISFFSA 392
Cdd:pfam00361 242 MPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAA---SWIFLVLAGVVGS 291
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
55-398 |
1.50e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 173.18 E-value: 1.50e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 55 DMISYGLILLSIWICLLMIMASenLNKLNFYINFFLFNIIILLIMLYMTFSVMNLFLFYLFFEGSLIPTLMLIIGWGYQP 134
Cdd:MTH00226 101 DGISIYFIILTGFIVPCSILIS--WHSVKYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSRE 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 135 ERIQAGMYLLFYTLFASLPMLMGIFFIF-----SNYNCMIMYFFKFLNENFFLLYLSMILAFLVKMPMYFVHLWLPKAHV 209
Cdd:MTH00226 179 EKMQAAYYFFFYTLIGSVLMLLCLFSLYnihgtTDYLTLASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHV 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 210 EAPVSGSMILAGIMLKLGGYGLLRI---LILFQKINMKYNLIWMiiSLLGGLYISLNCFCQVDMKSLIAYSSVAHMSLVI 286
Cdd:MTH00226 259 EAPVAGSVLLAGILLKLGGYGLVRLswpILPLGAQNLAPAVIAM--GIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVS 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 287 CGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAAPPSMNLMGE 366
Cdd:MTH00226 337 ITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGE 416
|
330 340 350
....*....|....*....|....*....|..
gi 674840501 367 ISLINSIVSWSYLSMISLIMISFFSAGYSLYL 398
Cdd:MTH00226 417 YLSILSSFNWNPIIGVFVCSGVILSAVYSFYF 448
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
68-419 |
5.50e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 163.92 E-value: 5.50e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 68 ICLLMIMASENLNKLNFYINFFLFNIIILLIMLYmtFSVMNLFLFYLFFEGSLIPTLMLIIGWGYQPERIQAGMYLLFYT 147
Cdd:MTH00094 45 IFMMVFILGLVLLSEKNFNLLILSNLLILICLLF--FVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYA 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 148 LFASLPMLmgiFFIFSNYNCMIMYFFKFLNENFFLLYLSmiLAFLVKMPMYFVHLWLPKAHVEAPVSGSMILAGIMLKLG 227
Cdd:MTH00094 123 AFFSFPFL---FVYLKNFFFFSLCYFDFFLSWEMFFILS--LSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLG 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 228 GYGLLRILILFqkiNMKYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYSSVAHMSLVICGIMTMNYWGYLGSYVMMIGH 307
Cdd:MTH00094 198 TAGFLRILGSL---NFVYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAH 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 308 GLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAAPPSMNLMGEISLINSIVSWSYLSMISLIMI 387
Cdd:MTH00094 275 GYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFY 354
|
330 340 350
....*....|....*....|....*....|..
gi 674840501 388 SFFSAGYSLYLYSYTQHGKYNMSIYSFYGGIS 419
Cdd:MTH00094 355 FLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLS 386
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
48-341 |
2.15e-37 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 142.48 E-value: 2.15e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 48 LSYMMGCDMISYGLILLSIWICLLMIMASENLNKLNfyiNFFLFNIIILLIMLYMTFSVMNLFLFYLFFEGSLIPTLMLI 127
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWKVTRKP---RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLI 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 128 IGWGYQpERIQAGMYLLFYTLFASLPMLMGIFFIFSNYNCMIMYFFKFLNENF-----FLLYLSMILAFLVKMPMYFVHL 202
Cdd:PRK12561 128 SIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYplaleLLLYAGFLIAFGVKLPIFPLHT 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 203 WLPKAHVEAPVSGSMILAGIMLKLGGYGLLRI-LILFQKINMKYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYSSVAH 281
Cdd:PRK12561 207 WLPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSH 286
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 282 MSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMP 341
Cdd:PRK12561 287 MGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMP 346
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
43-368 |
1.31e-32 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 129.05 E-value: 1.31e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 43 MNFCNLSYMMGCDMISYGLILLSIWICLLMIMAS-ENLNKLNFYINFflfnIIILLIMLYMTFSVMNLFLFYLFFEGSLI 121
Cdd:PRK06473 66 IDSLGLSYHLGVDGLSLPLLVLNSLLTLIAIYSSdESIQRPRFYYSL----LLLLNAGVSGAFLAQDLLLFFLFYELELI 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 122 PTLMLIIGWGYQpERIQAGMYLLFYTLFASLPMLMGIFFIF-----SNYNCMIMYFFKFLNENFFLLYLSMILAFLVKMP 196
Cdd:PRK06473 142 PLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVwlsgaSSFDYEPLRSHTLPLSTQLLLLAPILVGFGIKIP 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 197 MYFVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILILFQKINMKYNLIWM-IISLLGGLYISLNCFCQVDMKSLIA 275
Cdd:PRK06473 221 LVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMVA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 276 YSSVAHMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNM 355
Cdd:PRK06473 301 YSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMILGVM 380
|
330
....*....|...
gi 674840501 356 AAPPSMNLMGEIS 368
Cdd:PRK06473 381 ASAGIPGMVGFIA 393
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
48-358 |
4.08e-30 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 122.51 E-value: 4.08e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 48 LSYMMGCDMISYGLILLSIWICLLMIMASEnlnKLNFYINFFLFNIIILLIMLYMTFSVMNLFLFYLFFEGSLIPTLMLI 127
Cdd:PRK02546 79 LTWSVGADGLSMPLILLTGFITTLAVLAAW---PVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 128 IGWGYQpERIQAGMYLLFYTLFASLPML-----MGIFFIFSNYNcMIMYFFKFLNENF-FLLYLSMILAFLVKMPMYFVH 201
Cdd:PRK02546 156 AIWGGK-KRQYAATKFILYTAGSSLFILlaalaMAFYGDTPTFD-MTALAAKDFGLGFqLLCYAGLLIAYGVKLPIVPLH 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 202 LWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILI-LFQKINMKYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYSSVA 280
Cdd:PRK02546 234 TWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAgMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSIS 313
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 674840501 281 HMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAAP 358
Cdd:PRK02546 314 HMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALP 391
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
55-403 |
6.56e-30 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 120.64 E-value: 6.56e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 55 DMISYGLILLS--IWICLLMIMASENLNKLNFYINFFLFNIiiLLIMLYMTFSVMNLFLFYLFFEGSLIPTLMLIIGWGY 132
Cdd:COG0651 75 DRLSALFLLLTalVALAVLLYSIGYMRHERRGRRFYPLFLL--LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGT 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 133 qPERIQAGMYLLFYTLFASLPMLMGIFFIFSNYNCMIMYFFKFLNENF-----FLLYLSMILAFLVKMPMYFVHLWLPKA 207
Cdd:COG0651 153 -KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELdpgllLAAFALLLVGFGIKAALFPLHFWLPDA 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 208 HVEAPVSGSMILAGIMLKLGGYGLLRILILF--QKINMKYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYSSVAHMSLV 285
Cdd:COG0651 232 YPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYI 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 286 ICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAAPPSMNLMG 365
Cdd:COG0651 312 LLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVS 391
|
330 340 350
....*....|....*....|....*....|....*....
gi 674840501 366 EISLINSIV-SWSYLSMISLIMISFFSAGYSLYLYSYTQ 403
Cdd:COG0651 392 KWLLLQAALeAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
44-392 |
2.47e-29 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 119.66 E-value: 2.47e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 44 NFCNLSYMMGCDMISYGLILLSIWICLLMIMASENLNKlnfyiNFFLFNiiilLIMLYM------TFSVMNLFLFYLFFE 117
Cdd:CHL00011 72 NFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTR-----NSRLFY----FLMLAMysgqigLFSSRDLLLFFIMWE 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 118 GSLIPTLMLIIGWGYQpERIQAGMYLLFYTLFASLPMLMGIFFI-FSNYNCMIMYFFKFLNENF-----FLLYLSMILAF 191
Cdd:CHL00011 143 LELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMgLYGSNEPTLNFETLANQSYpvaleILFYIGFLIAY 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 192 LVKMPMYFVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRI-LILFQKINMKYNLIWMIISLLGGLYISLNCFCQVDM 270
Cdd:CHL00011 222 AVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNL 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 271 KSLIAYSSVAHMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLL 350
Cdd:CHL00011 302 KKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSF 381
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 674840501 351 MSSNMAAPPSMNLMGEISLINSIVSWSYLSMISLIMISFFSA 392
Cdd:CHL00011 382 SMASLALPGMSGFVAELIVFFGIITSQKYLLMPKILITFVMA 423
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
48-357 |
6.41e-26 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 109.80 E-value: 6.41e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 48 LSYMMGCDMISYGLILLSIWICLLMIMAS-ENLNKLNfyinffLFNIIILLIMLYMT--FSVMNLFLFYLFFEGSLIPTL 124
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLNSLLTWIAIYSIgENTERPR------LYYSLILLINGGIAgaLLAQNLLLFFLFYELELIPFY 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 125 MLIIGWGYQpERIQAGMYLLFYTLFASLPML---MGIFFIFSNYN-CMIMYFFKFLNENFFLLYLSMIL-AFLVKMPMYF 199
Cdd:PRK07363 145 LLIAIWGGE-KRGYASIKFLIYTAVSGLLVLaafLGIVWLSGSTSfDYDAISTQNLSLNTQLILLTGLLlGFGIKIPLVP 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 200 VHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRI-LILFQKINMKYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYSS 278
Cdd:PRK07363 224 LHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFgLQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSS 303
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 674840501 279 VAHMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAA 357
Cdd:PRK07363 304 IGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLVLAGMAS 382
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
55-419 |
9.63e-21 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 93.83 E-value: 9.63e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 55 DMISYGLILLSIWICLLMIMASENLnkLNFYINFFLFniiILLIMLYMTFSVMNLFLFYLFFEGSLIPTLMLIIGWGYQP 134
Cdd:MTH00062 44 DSLSFYLILLVLFLGLYSQVMFYNL--LSGVSRFFLF---LSLIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYS 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 135 ERIQAGMYLLFYTLFASLPMLMGIFFIFSNYNCMIMYFFKFLNENFFLLYLSMILAFLVKMPMYFVHLWLPKAHVEAPVS 214
Cdd:MTH00062 119 ERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSP 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 215 GSMILAGIMLKLGGYGLLRILILfqkINMKYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYSSVAHMSLVICGIMTMNY 294
Cdd:MTH00062 199 VSIFLSGYIMKLGLLGVYRFCGF---IFSGSFLGYLFLCCLFSVFFLITACSELDGKRWLAFLSLSHILVPVLGLFVGDW 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 295 WGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAAPPSMNLMGEISLInSIV 374
Cdd:MTH00062 276 SSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLV-SSS 354
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 674840501 375 SWSYLSMISLIMISFFSAGYSLYLYSY--TQHGKYNMSIYSFYGGIS 419
Cdd:MTH00062 355 FGVLVYLLFWCFYLFFGGLVPLILLGHllIRSESYESINVSNYSYLF 401
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
87-401 |
1.16e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 75.69 E-value: 1.16e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 87 NFFLFNIIILLIMLYMTFSVMNLFLFYLFFEGSLIPTLMLIIGWGYqPERIQAGMYLLFYTLFASLPMLMGIFFIFSNYN 166
Cdd:PRK08375 106 TRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGD-RRALAAARKYLIVGLIGSTFLLIGVGLLYGVTG 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 167 CMIMYF----FKFLNENFFLLYLsMILAFLVKMPMYFVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILILFQKIN 242
Cdd:PRK08375 185 TLNMADlagaLAENPTVVTAFGF-VLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGD 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 243 MKYNLIW----MIISLLGGLYISLNCFCQVDMKSLIAYSSVAHMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLV 318
Cdd:PRK08375 264 FRFALGLgwllAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAA 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 319 NINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAAPPSMNLMGEISLINSIVS-WSYLSMISLIMISFFSAGYSLY 397
Cdd:PRK08375 344 GAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLYFLR 423
|
....
gi 674840501 398 LYSY 401
Cdd:PRK08375 424 IWYR 427
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
73-315 |
4.95e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 67.47 E-value: 4.95e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 73 IMASENLNKLNFYINFFLFNIiiLLIMLYMTFSVMNLFLFYLFFEGSLIPTLMLIIGWGYQpERIQAGMYLLFYTLFASL 152
Cdd:PRK08676 90 LLSNGELDPENLKVFYLGFNL--LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSAR-ENIDAALKYIFIASTAMI 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 153 PMLMGIFFIFS-----------NYNCMIMYFFKFLNENFFLLYLSMILAFLVKMPMYFVHLWLPKAHVEAPVSGSMILAG 221
Cdd:PRK08676 167 FAFIGLIFLFSltrqalgtgtlNWTELAAHASLLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSG 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 222 IMLKLGGYGLLRILILFQKiNMKYNLIWMIISLLGGLYISLNCFC---QVDMKSLIAYSSVAHMSLVICGIMTMNYWGYL 298
Cdd:PRK08676 247 TVLNIGIYGILRLSALLRQ-SGAAEQFSNVLIGLGIFSIAVAAFSmlsQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALF 325
|
250
....*....|....*..
gi 674840501 299 GSYVMMIGHGLCSSGMF 315
Cdd:PRK08676 326 WMLFHMLAHSLVKSGLF 342
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-388 |
1.16e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 66.53 E-value: 1.16e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 55 DMISYGLILLSIWICLLMIMAS----ENLNKLNFYINFFLFNIIILLIMLYmTFSVMNLFLFylfFEGSLIPTLMLIIGW 130
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSywylEHESGPEWYYTLLLGLEAGMLGILL-TGDAFNLFVM---LEVLSISAYGLVAYY 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 131 GYQPERIQAGMYLLFYTLFASLPMLMGIFFIFSNYNCMIM---------YFF----KFLNENFFLLYLSMIL---AFLVK 194
Cdd:PRK12667 157 RDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMadlsakirgLSFpltgGLAGNPPLALGVALALalwAFTIK 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 195 MPMYFVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILILFQKINMK-------YNLIWMIISLLGGLYISLNCFCQ 267
Cdd:PRK12667 237 AAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSlidfraaLSPILIILGAVSAIIGALMMVVQ 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 268 VDMKSLIAYSSVAHMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWW 347
Cdd:PRK12667 317 KDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAF 396
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 674840501 348 FLLMSSNMAAPPSMNLMGEISLINSIVSWSYLSMISLIMIS 388
Cdd:PRK12667 397 LIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIA 437
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-103 |
2.90e-11 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 60.23 E-value: 2.90e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 1 MMKFLMMMIFTIPLCFLNNMFWM-----VQMVLLLMMFMFMNLNMNIMNFCNLSYMMGCDMISYGLILLSIWICLLMIMA 75
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLwttstLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 674840501 76 SENLNKL--NFYINFFLFNIIILLIMLYMT 103
Cdd:pfam01059 81 SQKHLKSepNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
97-400 |
1.09e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 63.60 E-value: 1.09e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 97 LIMLYMTFSVM--NLFLFYLFFEGSLIPTLMLIIGWGYQPERIQAGMYLLFYTLFASLPMLMGIFFIFSNYNCMIMYFFK 174
Cdd:PRK08667 119 LFILSMLGVVAsaNTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLG 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 175 FLNENFFLLYLSMILAFLVKMPMYFVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILILFQKINMKYNLIWMIISL 254
Cdd:PRK08667 199 ASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGS 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 255 LGGLYISLNCFCQVDMKSLIAYSSVAHMSLVICGI-----------MTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYE 323
Cdd:PRK08667 279 ISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIglyvifgvyglDTLALLALGGALFHSLNHALFKSLLFLTAGSVVH 358
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 674840501 324 RLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAAPPSMNLMGEISLINSIVSwSYLSMISLIMISFFSAGYSLYLYS 400
Cdd:PRK08667 359 ATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQ-SFSVADPLIKILLFSVLAIFALTS 434
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
109-315 |
1.17e-10 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 63.48 E-value: 1.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 109 LFLFYLFFEGSLIPTLMLIIgWGYQPERIQAGMYLLFYTLFASLpMLMGIFFIFS-----NYNCMIMYFFKFLNENFFLL 183
Cdd:PRK08668 120 LLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVLSAIGAYA-MLYAIFLIYAktgtfDFADISQGLINDTSTGFALI 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 184 YLSMILAF-LVKMPMYFVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILILFQKINMKYNLIWM--------IISL 254
Cdd:PRK08668 198 VFLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLFSEFGTYrgvplfnyILAW 277
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 674840501 255 LGGLYISLNCFC---QVDMKSLIAYSSVAHMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMF 315
Cdd:PRK08668 278 LGNISIIVGTLMailQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
88-353 |
2.81e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 61.89 E-value: 2.81e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 88 FFLFNIIILLIMLYMTFSVMNLFLFYLFFEGSLIPTLMLIIgWGYQPERIQAGMYLLFYTLFASLPMLMGIFFIF-SNYN 166
Cdd:PRK07234 95 FFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYqANGT 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 167 CMIMYFFKFLNENFFLLylsmILAFLVKMPMYFVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILILFqkinmkyN 246
Cdd:PRK07234 174 FAFSGLATADPEAFALI----ALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDV-------P 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 247 LIWMIISLLGG---LYISLNCFCQVDMKSLIAYSSVAHMSLVICGIMTMNYWGylgsyvmmIGHGLCSSGMFCLVNInye 323
Cdd:PRK07234 243 GLDLIVRIFGVgtaLLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVGGLYA--------LAHGLVKSTLFLCAGA--- 311
|
250 260 270
....*....|....*....|....*....|
gi 674840501 324 rLQSRSLymnKGMMNFMPSMSLWWFLLMSS 353
Cdd:PRK07234 312 -LPSRNF---TELISQMLGIGKWIPLTMAS 337
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
200-392 |
6.34e-10 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 61.10 E-value: 6.34e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 200 VHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLR--ILILFQKINMKYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYS 277
Cdd:PRK06458 233 MHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRyyILIDAAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYS 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 278 SVAHMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSlwWFLLMSSnMA- 356
Cdd:PRK06458 313 SIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTG--WGLMLGA-LAi 389
|
170 180 190
....*....|....*....|....*....|....*...
gi 674840501 357 --APPSMNLMGEISLINSIVSWSYLSMISLIMISFFSA 392
Cdd:PRK06458 390 agMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLA 427
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
186-386 |
1.49e-08 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 56.70 E-value: 1.49e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 186 SMILAFLVKMPMYFVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILILFQKINMKYNLIWMII--SLLGGLYISLN 263
Cdd:PRK08377 211 LLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLVIimATLTVFFAELS 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 264 CFCQVDMKSLIAYSSVAHMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSM 343
Cdd:PRK08377 291 ALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLT 370
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 674840501 344 SLWWFLLMSSNMAAPPSMNLMGEISLINSIVSWSYLSMISLIM 386
Cdd:PRK08377 371 ALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVL 413
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-289 |
2.38e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 56.26 E-value: 2.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 108 NLFLFYLFFEGSLIPTLMLIIGWGYQPERIQAGMYLLFYTLFASLPMLMGIFFIFSNYNCMIM-YFFKFLNENFFLLYLS 186
Cdd:PRK08376 142 DLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMaYLAVKMSENPTVVAKI 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 187 ----MILAFLVKMPMYFVHLWLPKAHVEAPVSGSMILagIMLKLGG-YGLLRILILFQKINMKYNLIWMIISLLGGLYIS 261
Cdd:PRK08376 222 alalFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAINLATVGWVIIILGCLTMF 299
|
170 180 190
....*....|....*....|....*....|.
gi 674840501 262 LN---CFCQVDMKSLIAYSSVAHMSLVICGI 289
Cdd:PRK08376 300 VGvamAVVQKDVKRLLAYHSVSQIGYMLLGL 330
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
84-289 |
7.72e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 54.51 E-value: 7.72e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 84 FYINFFLFNIIILLIMlymtfsvMNLFLFYLFFEGSLIPTLMLIIGWGYQPERIQAGMYLLFYTLFASLPMLMGIFFIFS 163
Cdd:PRK06521 117 FFYNLFLASMVLVLLA-------DDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLAR 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 164 NYNCMIMYFFKFLNENFFLLYLSMILAFL---VKMPMYFVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILILFQK 240
Cdd:PRK06521 190 ESGSYDFAAMRAAHLSPFWASLVFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLG 269
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 674840501 241 INMKYnliWMII--------SLLGGLYISLncfcQVDMKSLIAYSSVAHMSLVICGI 289
Cdd:PRK06521 270 APGWW---WGVLvlalgaisAVLGVLYALA----EHDLKRLLAYSTIENIGIIFVGL 319
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
87-359 |
2.10e-06 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 49.97 E-value: 2.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 87 NFFLFNIIILLIMLYMTFSVmNLFLFYLFFEgsliptLMLIIGWG----YQ-PERIQAGMYLLFYTLFASLPMLMGIFFI 161
Cdd:PRK06525 114 RYYAFLLLFIGAMAGLVYSS-TLLGLLLFFE------ITGLCSWAlisyYQsPKALRSALKALLITHIGSLGLYLAAATL 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 162 FSNYNCMIMYFFKFLNENF-FLLYLSMILAFLVKMPMYFVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRILILFQ 239
Cdd:PRK06525 187 FLQTGTFALSALSGLHGSLkYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMG 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 240 KINMKYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYSSVAHMSLVICGIMTMNY---WGYLGSYVMMIGHGLCSSGMFC 316
Cdd:PRK06525 266 PIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILgsrLALEGSIAYIFNHAFAKSLFFL 345
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 674840501 317 LVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAAPP 359
Cdd:PRK06525 346 VAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPP 388
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
201-368 |
2.84e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 49.66 E-value: 2.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 201 HLWLPKAHVEA-PVSgSMILAGIMLKLGGYGLLRILILFQKiNMKYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYSSV 279
Cdd:PRK12650 228 HFWLPEAMAAItPVS-AFLHAAAVVKAGIYLLLRFSPVFHD-VAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTV 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 280 AHMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPsMSLWWFLLMSSNMAA-P 358
Cdd:PRK12650 306 SQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMP-FTFVSVTIAALSMAAvP 384
|
170
....*....|
gi 674840501 359 PsmnLMGEIS 368
Cdd:PRK12650 385 P---LFGFVS 391
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-394 |
4.39e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 48.96 E-value: 4.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 185 LSMILAFLVKMPMYFVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILILFQKIN-----MKYNLIWMIISLLGGLY 259
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANfvfttLPFNNVFMILAALAIVF 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 260 ISLNCFCQVDMKSLIAYSSVAHMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNF 339
Cdd:PRK12662 293 GSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKS 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 674840501 340 MPSMSLWWFLLMSSNMAAPPSMNLMGEISLINSIV-SWSYLSMISLIMISFFSAGY 394
Cdd:PRK12662 373 MPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIkSNAWIGLVVLLVGSGLSVIY 428
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
77-408 |
2.24e-05 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 47.06 E-value: 2.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 77 ENLNKLNFYINFFLFNIIILLImlymtfsVMNLFLFYLFFEGSLIPTLMLIIGWGYQPERIQAGMYLLFYTLFASLPMLM 156
Cdd:PRK12646 107 DNLPRFYFYLTLFMFSMIGIVL-------SDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLV 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 157 G--IFFIFSNYNCMIMYFFKFLNENFFLLYLSMILAFLV----KMPMYFVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGY 229
Cdd:PRK12646 180 GfiMLYIMTGTNNITEILGQADHIKNHGLFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIF 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 230 GLLRILILFQKINMkYNLIWMIISLLGGLYISLNCFCQVDMKSLIAYSSVAH----MSLV-ICGIMTMNYWGYLGSYVMM 304
Cdd:PRK12646 259 LLFRFTPLLGLSNM-YIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQlgmiMAMVgIGGGYAQHQQDAIASIYVF 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 305 I---------GHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLwWFLLMSSNMAAPPSMN-LMGEISLINSIV 374
Cdd:PRK12646 338 VlfaalfhlmNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLNgFLSKEMFLDALT 416
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 674840501 375 SWSYLSMISLIMI----------SFFSAGYSLYLYSYTQHGKYN 408
Cdd:PRK12646 417 QTGQLSQFSLISMiiivfigviaSIFTFTYALYMVKEVFWGKYD 460
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
42-396 |
2.50e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 46.35 E-value: 2.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 42 IMNFCNLSymMGCDMISYGLILLS----IWIC-LLMIMASENLNKLNFYINFFLFNIIILLIMLYMTFSVmNLFLFYLFF 116
Cdd:PRK06589 69 LMDFGNYS--IGLHLEPLGLIFLLligfLWICaLLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSS-DLFTMFVCY 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 117 EGSLIPTLMLIIGWGYQPERIQAGMYLLFYTLFASLPMLMGIFFIFSNYNCMIMYFFKFLNENFFLLYLSMILAFLVKMP 196
Cdd:PRK06589 146 ELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTA 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 197 MYFVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILILFQKINMKYNLIWM-----IISLLGGLYISLNCFCQVDMK 271
Cdd:PRK06589 226 IFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEfnwliFIPIVSIFYSSLKALKTDNIK 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 272 SLIAYSSVAHMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLM 351
Cdd:PRK06589 306 KILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISS 385
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 674840501 352 SSNMAAPPSMNLMGEISLI-----NSIVSWSYLSMISLIMISFFSAGYSL 396
Cdd:PRK06589 386 LSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLL 435
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-359 |
5.23e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 42.24 E-value: 5.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 55 DMISYGLILLSIWICLLMIMASENLNKLNFYINFFLFNIIILLIMLYMTFSVMNLFLFYLFFEGSLIPTLMLIIGWGYQP 134
Cdd:PRK07691 76 DMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKI 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 135 ERIQAGMYLLFyTLFASLPMLMGIFFIFSNYNCMIM-----YFFKFLNENFFLLYLSMILAFLV------KMPMYFvhlW 203
Cdd:PRK07691 156 QLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLNMadisvKIAELSAGQTGLITVVAILFLFVfatkagLFPLYF---W 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 204 LPKAHVEAPVSGSMILAGIMLKLGGYGLLRILILFqkINMKYNLIWMIISLLGGLYISLNCF---CQVDMKSLIAYSSVA 280
Cdd:PRK07691 232 LPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLF--FSHDTSFTHYLILILALLTIIFGVIgavAYFDIKKIIIYNIMI 309
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 674840501 281 HMSLVICGIMTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMSLWWFLLMSSNMAAPP 359
Cdd:PRK07691 310 AVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPP 388
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
173-279 |
5.92e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 42.08 E-value: 5.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 173 FKFLNENFFLLYLSMilAFLVKMPM--YFVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILILFQKINMKY-NLIW 249
Cdd:PRK06459 152 FSYLPSPVPLILASF--GFIIKMGMmpFLVSEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYfGLTI 229
|
90 100 110
....*....|....*....|....*....|
gi 674840501 250 MIISLLGGLYISLNCFCQVDMKSLIAYSSV 279
Cdd:PRK06459 230 LAIGAFSILFGALYAYVSENVKGLLAFSTI 259
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
88-289 |
4.45e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 39.55 E-value: 4.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 88 FFLFNIIILLIMLYMTFSvMNLFLFYLFFEGSLIPTLMLIIGWGYQPERIQAGMYLLFYTLFASLPMLMGIFFIFSNYNC 167
Cdd:MTH00211 112 FFKYLLLFLIFMLILVSA-NNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNS 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 168 MIMYFFKFLNENFFLLYLSMILAFLVKMPMYFVHLWLPKAhVEAPV-------SGSMILAGIMLklggygllriLILFQK 240
Cdd:MTH00211 191 WEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSA-MEGPTpvsallhSSTMVVAGVFL----------LIRLSP 259
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 674840501 241 INMKYNLIWMIISLLGG---LYISLNCFCQVDMKSLIAYSSVAHMSLVICGI 289
Cdd:MTH00211 260 LFQNNQLILGAVLLLGAltmLFGALCALTQNDIKKIVAFSTTSQLGLMMVTL 311
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
200-362 |
4.80e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 39.43 E-value: 4.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 200 VHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRILILFQKINMKYN----LIWMIISLLGGLYISLncfcQVDMKSLIA 275
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGvallVLGMITAFVGGLYALM----EHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 276 YSSVAHMSLVICGI-----------MTMNYWGYLGSYVMMIGHGLCSSGMFCLVNINYERLQSRSLYMNKGMMNFMPSMS 344
Cdd:PRK08042 275 YHTLENIGIILLGLgagvtgialeqPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*....
gi 674840501 345 LWWFL-LMSsnMAAPPSMN 362
Cdd:PRK08042 355 IAMLVgLMA--MAALPPLN 371
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
87-289 |
5.07e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 39.18 E-value: 5.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 87 NFFLFNIIILLIMLYMTFSvMNLFLFYLFFEGSLIPTLMLIIGWGYQPERIQAGMYLLFYTLFASLPMLMGIFFIFSNYN 166
Cdd:MTH00208 139 AFFRLLIIFLLNMLILTSS-NNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFN 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 167 CM----IMYFFKFLNENFFLLYLSMILAFLVKMPMYFVHLWLPKAhVEAPV-------SGSMILAGIMLklggygLLRIL 235
Cdd:MTH00208 218 SWnlneILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTpvsallhSSTMVVAGVFL------LIRTS 290
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 674840501 236 ILFQKINMKYNLIwMIISLLGGLYISLNCFCQVDMKSLIAYSSVAHMSLVICGI 289
Cdd:MTH00208 291 PLISNSPWFLSLC-LILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAI 343
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
85-319 |
6.76e-03 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 38.98 E-value: 6.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 85 YINFFLFNIIILlimlymtfsVM--NLFLFYLFFEGSLIPTLMLIIGWGYQPERIQAGMYLLFYTLFASLPMLMGIFFIF 162
Cdd:COG1009 116 YLLLFMAAMLGL---------VLsdNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLG 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 163 S-----NYNCMIMYFFKFLNENFFLLYLSMIL-AFLVKMPMYFVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRIL 235
Cdd:COG1009 187 AiagtlNFSELLAAAPTILSSPLLTLILLLLLlGAFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLS 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840501 236 ILFQkinmkYNLIWMI-------ISLLGGLYISLncfCQVDMKSLIAYSSVAHMslvicgimtmnywGYLgsyVMMIGHG 308
Cdd:COG1009 266 PLFA-----LSPVWLTvvaiigaITALFAALIAL---AQTDIKRVLAYSTVSQL-------------GYM---FLALGVG 321
|
250
....*....|.
gi 674840501 309 LCSSGMFCLVN 319
Cdd:COG1009 322 AYVAALFHLLT 332
|
|
| |
