|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
15-370 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 648.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 15 FKIINNSLIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRTLHANGASFF 94
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 95 FICIYLHIGRGIYYESFNLKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVNWIWGGFAI 174
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 175 DNATLTRFYSFHFLFPFIILMLTMIHLLFLHQTGSNNPLGMNSNLDKIPFHPFFTFKDLIGFILLLSLLSMLTLTNPYLL 254
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 255 GDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILIILPLTFNKKIQGIQFYPLNQMLFWIMVS 334
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*.
gi 674840502 335 TIILLTWAGARPVEEPYIITSQILTLLYFSYFIINP 370
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
20-374 |
9.51e-113 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 334.45 E-value: 9.51e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 20 NSLIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRTLHANGASFFFICIY 99
Cdd:COG1290 25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 100 LHIGRGIYYESFnlKY----TWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVNWIWGGFAID 175
Cdd:COG1290 105 LHMFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPG 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 176 NATLTRFYSFH-FLFPFIILMLTMIHLLFLHQTGSNNPLG----MNSNLDKIPFHPFFTFKDLIGFILLLSLLSMLTLTN 250
Cdd:COG1290 183 DATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFF 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 251 PylLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIP--NKLGGVIALVMSILILIILPLTFNKKIQGIQFYPLNQML 328
Cdd:COG1290 263 P--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTAL 340
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 674840502 329 FWIMVSTIILLTWAGARPveEPYIITSQILTLLYFSYFIIN-PIISK 374
Cdd:COG1290 341 GVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLIVlPILAF 385
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
13-210 |
9.39e-86 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 258.45 E-value: 9.39e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 13 PLFKIINNSLIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRTLHANGAS 92
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 93 FFFICIYLHIGRGIYYESFN--LKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVNWIWG 170
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 674840502 171 GFAIDNATLTRFYSFHFLFPFIILMLTMIHLLFLHQTGSN 210
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
22-208 |
9.73e-77 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 234.97 E-value: 9.73e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 22 LIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRTLHANGASFFFICIYLH 101
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 102 IGRGIYYESFN--LKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVNWIWGGFAIDNATL 179
Cdd:pfam00033 81 IFRGLYYGGFSypRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 674840502 180 TRFYSFHFLFPFIILMLTMIHLLFLHQTG 208
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
262-300 |
2.01e-07 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 50.18 E-value: 2.01e-07
10 20 30
....*....|....*....|....*....|....*....
gi 674840502 262 PANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVM 300
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAA 103
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
15-370 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 648.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 15 FKIINNSLIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRTLHANGASFF 94
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 95 FICIYLHIGRGIYYESFNLKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVNWIWGGFAI 174
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 175 DNATLTRFYSFHFLFPFIILMLTMIHLLFLHQTGSNNPLGMNSNLDKIPFHPFFTFKDLIGFILLLSLLSMLTLTNPYLL 254
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 255 GDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILIILPLTFNKKIQGIQFYPLNQMLFWIMVS 334
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*.
gi 674840502 335 TIILLTWAGARPVEEPYIITSQILTLLYFSYFIINP 370
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
6-382 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 591.49 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 6 FPIRKTHPLFKIINNSLIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRT 85
Cdd:MTH00145 3 SPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 86 LHANGASFFFICIYLHIGRGIYYESFNLKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLV 165
Cdd:MTH00145 83 LHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLV 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 166 NWIWGGFAIDNATLTRFYSFHFLFPFIILMLTMIHLLFLHQTGSNNPLGMNSNLDKIPFHPFFTFKDLIGFILLLSLLSM 245
Cdd:MTH00145 163 EWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 246 LTLTNPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILIILPLTFNKKIQGIQFYPLN 325
Cdd:MTH00145 243 LVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLN 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 674840502 326 QMLFWIMVSTIILLTWAGARPVEEPYIITSQILTLLYFSYFIINPIISKYWDNLIFN 382
Cdd:MTH00145 323 QVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNILDY 379
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
8-373 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 579.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 8 IRKTHPLFKIINNSLIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRTLH 87
Cdd:MTH00119 5 LRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 88 ANGASFFFICIYLHIGRGIYYESFNLKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVNW 167
Cdd:MTH00119 85 ANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 168 IWGGFAIDNATLTRFYSFHFLFPFIILMLTMIHLLFLHQTGSNNPLGMNSNLDKIPFHPFFTFKDLIGFILLLSLLSMLT 247
Cdd:MTH00119 165 IWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLA 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 248 LTNPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILIILPLTFNKKIQGIQFYPLNQM 327
Cdd:MTH00119 245 LFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQL 324
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 674840502 328 LFWIMVSTIILLTWAGARPVEEPYIITSQILTLLYFS-YFIINPIIS 373
Cdd:MTH00119 325 LFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTiLLILFPLLG 371
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
8-368 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 570.83 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 8 IRKTHPLFKIINNSLIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRTLH 87
Cdd:MTH00131 4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 88 ANGASFFFICIYLHIGRGIYYESFNLKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVNW 167
Cdd:MTH00131 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 168 IWGGFAIDNATLTRFYSFHFLFPFIILMLTMIHLLFLHQTGSNNPLGMNSNLDKIPFHPFFTFKDLIGFILLLSLLSMLT 247
Cdd:MTH00131 164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 248 LTNPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILIILPLTFNKKIQGIQFYPLNQM 327
Cdd:MTH00131 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 674840502 328 LFWIMVSTIILLTWAGARPVEEPYIITSQILTLLYFSYFII 368
Cdd:MTH00131 324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLV 364
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
5-381 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 567.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 5 FFPIRKTHPLFKIINNSLIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIR 84
Cdd:MTH00016 2 FSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 85 TLHANGASFFFICIYLHIGRGIYYESFNLKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSML 164
Cdd:MTH00016 82 NLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKML 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 165 VNWIWGGFAIDNATLTRFYSFHFLFPFIILMLTMIHLLFLHQTGSNNPLGMNSNLDKIPFHPFFTFKDLIGFILLLSLLS 244
Cdd:MTH00016 162 VQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 245 MLTLTNPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILIILPLTFNKKIQGIQFYPL 324
Cdd:MTH00016 242 SVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPL 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 674840502 325 NQMLFWIMVSTIILLTWAGARPVEEPYIITSQILTLLYFSYFIINPIISKYWDNLIF 381
Cdd:MTH00016 322 NQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
8-368 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 564.54 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 8 IRKTHPLFKIINNSLIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRTLH 87
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 88 ANGASFFFICIYLHIGRGIYYESFNLKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVNW 167
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 168 IWGGFAIDNATLTRFYSFHFLFPFIILMLTMIHLLFLHQTGSNNPLGMNSNLDKIPFHPFFTFKDLIGFILLLSLLSMLT 247
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 248 LTNPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILIILPLTFNKKIQGIQFYPLNQM 327
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 674840502 328 LFWIMVSTIILLTWAGARPVEEPYIITSQILTLLYFSYFII 368
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
7-382 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 560.45 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 7 PIRKTHPLFKIINNSLIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRTL 86
Cdd:MTH00074 4 PIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNI 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 87 HANGASFFFICIYLHIGRGIYYESFNLKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVN 166
Cdd:MTH00074 84 HANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQ 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 167 WIWGGFAIDNATLTRFYSFHFLFPFIILMLTMIHLLFLHQTGSNNPLGMNSNLDKIPFHPFFTFKDLIGFILLLSLLSML 246
Cdd:MTH00074 164 WIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 247 TLTNPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILIILPLTFNKKIQGIQFYPLNQ 326
Cdd:MTH00074 244 SLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQ 323
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 674840502 327 MLFWIMVSTIILLTWAGARPVEEPYIITSQILTLLYFSYFIINPIISKYWDNLIFN 382
Cdd:MTH00074 324 ILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLK 379
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
7-380 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 553.09 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 7 PIRKTHPLFKIINNSLIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRTL 86
Cdd:MTH00100 3 NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 87 HANGASFFFICIYLHIGRGIYYESFNLKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVN 166
Cdd:MTH00100 83 HANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVE 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 167 WIWGGFAIDNATLTRFYSFHFLFPFIILMLTMIHLLFLHQTGSNNPLGMNSNLDKIPFHPFFTFKDLIGFILLLSLLSML 246
Cdd:MTH00100 163 WIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 247 TLTNPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILIILPLTFNKKIQGIQFYPLNQ 326
Cdd:MTH00100 243 VLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQ 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 674840502 327 MLFWIMVSTIILLTWAGARPVEEPYIITSQILTLLYFSYFII-NPIISKYWDNLI 380
Cdd:MTH00100 323 CLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILIlMPIASLIENNLL 377
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
7-382 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 531.20 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 7 PIRKTHPLFKIINNSLIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRTL 86
Cdd:MTH00034 3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 87 HANGASFFFICIYLHIGRGIYYESFNLKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVN 166
Cdd:MTH00034 83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 167 WIWGGFAIDNATLTRFYSFHFLFPFIILMLTMIHLLFLHQTGSNNPLGMNSNLDKIPFHPFFTFKDLIGFILLLSLLSML 246
Cdd:MTH00034 163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 247 TLTNPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILIILPLTFNKKIQGIQFYPLNQ 326
Cdd:MTH00034 243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 674840502 327 MLFWIMVSTIILLTWAGARPVEEPYIITSQILTLLYFSYFII-NPIISKYWDNLIFN 382
Cdd:MTH00034 323 IAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFfFPLISYLENKLIFS 379
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
5-380 |
1.95e-173 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 488.28 E-value: 1.95e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 5 FFPIRKTHPLFKIINNSLIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIR 84
Cdd:MTH00224 2 FKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 85 TLHANGASFFFICIYLHIGRGIYYESFNLKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSML 164
Cdd:MTH00224 82 SIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 165 VNWIWGGFAIDNATLTRFYSFHFLFPFIILMLTMIHLLFLHQTGSNNPLGMNSNLDKIPFHPFFTFKDLIGFILLLSLLS 244
Cdd:MTH00224 162 VEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 245 MLTLTNPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILIILPLTFNKKIQGIQFYPL 324
Cdd:MTH00224 242 LMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPL 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 674840502 325 NQMLFWIMVSTIILLTWAGARPVEEPYIITSQILTLLYFSYFIINPIISKYWDNLI 380
Cdd:MTH00224 322 NQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLL 377
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
7-382 |
1.60e-163 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 463.02 E-value: 1.60e-163
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 7 PIRKTHPLFKIINNSLIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRTL 86
Cdd:MTH00022 2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 87 HANGASFFFICIYLHIGRGIYYESFNLKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVN 166
Cdd:MTH00022 82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 167 WIWGGFAIDNATLTRFYSFHFLFPFIILMLTMIHLLFLHQTGSNNPLGMNSNLDKIPFHPFFTFKDLIGFILLLSLLSML 246
Cdd:MTH00022 162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 247 TLTNPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILIILPLTFNKKIQGIQFYPLNQ 326
Cdd:MTH00022 242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 674840502 327 MLFWIMVSTIILLTWAGARPVEEPYIITSQILTLLYFSYF-IINPIISKYWDNLIFN 382
Cdd:MTH00022 322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFlVLIPLLGELENQLLFK 378
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
8-378 |
2.75e-158 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 449.93 E-value: 2.75e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 8 IRKTHPLFKIINNSLIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRTLH 87
Cdd:MTH00053 5 IRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 88 ANGASFFFICIYLHIGRGIYYESFNLKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVNW 167
Cdd:MTH00053 85 ANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 168 IWGGFAIDNATLTRFYSFHFLFPFIILMLTMIHLLFLHQTGSNNPLGMNSNLDKIPFHPFFTFKDLIGFILLLSLLSMLT 247
Cdd:MTH00053 165 VWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 248 LTNPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILIILPLTFNKKIQGIQFYPLNQM 327
Cdd:MTH00053 245 FLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKI 324
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 674840502 328 LFWIMVSTIILLTWAGARPVEEPYIITSQILTLLYFSYFIINPIISKYWDN 378
Cdd:MTH00053 325 LFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLEN 375
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
20-381 |
1.06e-124 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 364.64 E-value: 1.06e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 20 NSLIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRTLHANGASFFFICIY 99
Cdd:MTH00033 13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 100 LHIGRGIYYESFNLKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVNWIWGGFAIDNATL 179
Cdd:MTH00033 93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 180 TRFYSFHFLFPFIILMLTMIHLLFLHQTGSNNPLGMNSNLDKIPFHPFFTFKDLIGFILLLSLLSMLTLTN--PYLLGDP 257
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriETLLQDP 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 258 DNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILIILPLTFNKKIQGIQFYPLNQMLFWIMVSTII 337
Cdd:MTH00033 253 ENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFI 332
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 674840502 338 LLTWAGARPV-EEPYIITSQILTLLYFSYFIINPIISKYWDNLIF 381
Cdd:MTH00033 333 ILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSNLFY 377
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
16-368 |
7.28e-123 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 358.87 E-value: 7.28e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 16 KIINNSLIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRTLHANGASFFF 95
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 96 ICIYLHIGRGIYYESFNLKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVNWIWGGFAID 175
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 176 NATLTRFYSFHFLFPFIILMLTMIHLLFLHQTGSNNPLGMNSNLDKIPFHPFFTFKDLIGFIlLLSLLSMLTLTNPYLLG 255
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNII-FWLVFIIFSLFYPFNLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 256 DPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILIILPLTFNKkiqGIQFYPLNQMLFWIMVST 335
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVV 316
|
330 340 350
....*....|....*....|....*....|...
gi 674840502 336 IILLTWAGARPVEEPYIITSQILTLLYFSYFII 368
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILL 349
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
20-374 |
9.51e-113 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 334.45 E-value: 9.51e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 20 NSLIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRTLHANGASFFFICIY 99
Cdd:COG1290 25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 100 LHIGRGIYYESFnlKY----TWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVNWIWGGFAID 175
Cdd:COG1290 105 LHMFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPG 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 176 NATLTRFYSFH-FLFPFIILMLTMIHLLFLHQTGSNNPLG----MNSNLDKIPFHPFFTFKDLIGFILLLSLLSMLTLTN 250
Cdd:COG1290 183 DATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFF 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 251 PylLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIP--NKLGGVIALVMSILILIILPLTFNKKIQGIQFYPLNQML 328
Cdd:COG1290 263 P--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTAL 340
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 674840502 329 FWIMVSTIILLTWAGARPveEPYIITSQILTLLYFSYFIIN-PIISK 374
Cdd:COG1290 341 GVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLIVlPILAF 385
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
13-210 |
9.39e-86 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 258.45 E-value: 9.39e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 13 PLFKIINNSLIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRTLHANGAS 92
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 93 FFFICIYLHIGRGIYYESFN--LKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVNWIWG 170
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 674840502 171 GFAIDNATLTRFYSFHFLFPFIILMLTMIHLLFLHQTGSN 210
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
16-361 |
6.84e-81 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 251.83 E-value: 6.84e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 16 KIINNSLIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRTLHANGASFFF 95
Cdd:MTH00046 3 SLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 96 ICIYLHIGRGIYYESFNLKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVNWIWGGFAID 175
Cdd:MTH00046 83 ILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVT 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 176 NATLTRFYSFHFLFPFIILMLTMIHLLFLHQTGSNNPLGMNSNL-DKIPFHPFFTFKDLIGFILLLSLLSMLTLTNPYLL 254
Cdd:MTH00046 163 GVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLV 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 255 GDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIaLVMSiLILIILPLTFNKkiqGIQFYPLNQMLFWIMVS 334
Cdd:MTH00046 243 LDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLS-FLFFLWVPTFNG---SSVYSVWRQVNFWLIVS 317
|
330 340
....*....|....*....|....*..
gi 674840502 335 TIILLTWAGARPVEEPYIITSQILTLL 361
Cdd:MTH00046 318 LFFSLSYLGGCHPEYPYLLISQLFSVL 344
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
22-208 |
9.73e-77 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 234.97 E-value: 9.73e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 22 LIDLPSPSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRTLHANGASFFFICIYLH 101
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 102 IGRGIYYESFN--LKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVNWIWGGFAIDNATL 179
Cdd:pfam00033 81 IFRGLYYGGFSypRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 674840502 180 TRFYSFHFLFPFIILMLTMIHLLFLHQTG 208
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
92-257 |
1.48e-42 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 146.23 E-value: 1.48e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 92 SFFFICIYLHIGRGIYYESFN--LKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVNWIW 169
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRkpRELNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 170 GGFAIDNATLTRFYSFHF-LFPFIILMLTMIHLLFLHQTGSNNPLGMNSNLDKIPFHPFFTFKDLIGFILLLSLLSMLTL 248
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 674840502 249 TNPYLLGDP 257
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
37-213 |
8.84e-40 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 141.00 E-value: 8.84e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 37 FGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRTLHANGASFFFICIYLHIGRGIYYESFN--LK 114
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKkpRE 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 115 YTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVNWIWGGFAIDNATLTRFYSFH-FLFPFII 193
Cdd:PRK03735 124 LNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170 180
....*....|....*....|
gi 674840502 194 LMLTMIHLLFLHQTGSNNPL 213
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGPL 223
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
211-357 |
1.09e-38 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 135.47 E-value: 1.09e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 211 NPLGMNSNLDKIPFHPFFTFKDLIGFILLLSLLSMLTLTNPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPN 290
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 674840502 291 KLGGVIALVMSILILIILPLTFNKKIQGiQFYPLNQMLFWIMVSTIILLTWAGARPVEEPYIITSQI 357
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
262-362 |
3.60e-33 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 119.51 E-value: 3.60e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 262 PANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILIILPLTFNKKIQGIQFYPLNQMLFWIMVSTIILLTW 341
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 674840502 342 AGARPVEEPYIITSQILTLLY 362
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| petB |
CHL00070 |
cytochrome b6 |
28-213 |
6.14e-33 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 122.52 E-value: 6.14e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 28 PSNISSWWNFGSLLALCLIIQILTGLFLTMYYTANIELAFYSVNYICRNVNYGWLIRTLHANGASFFFICIYLHIGRGIY 107
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674840502 108 YESFN--LKYTWMVGIIILFILMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGSMLVNWIWGGFAIDNATLTRFYSF 185
Cdd:CHL00070 107 TGGFKkpRELTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*....
gi 674840502 186 H-FLFPFIILMLTMIHLLFLHQTGSNNPL 213
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
250-299 |
2.31e-08 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 52.87 E-value: 2.31e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 674840502 250 NPYLLGDPdnfipANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALV 299
Cdd:COG5679 59 DPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMA 103
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
251-299 |
4.73e-08 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 51.93 E-value: 4.73e-08
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 674840502 251 PYLLGDPdnfipANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALV 299
Cdd:CHL00058 59 PSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMA 102
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
262-300 |
2.01e-07 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 50.18 E-value: 2.01e-07
10 20 30
....*....|....*....|....*....|....*....
gi 674840502 262 PANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVM 300
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAA 103
|
|
| |
