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Conserved domains on  [gi|699257011|ref|YP_009093743|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Cricetulus longicaudatus]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009566)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177166  Cd Length: 318  Bit Score: 594.68  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   1 MHLINIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLT 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  81 LAFSLWIPIPMPHPLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 161 SLQTLITTQEHMWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTI 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 699257011 241 VFLGPYNNPMHPEMFTTNFMLKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISMPIFMASIPPYT 318
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 594.68  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   1 MHLINIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLT 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  81 LAFSLWIPIPMPHPLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 161 SLQTLITTQEHMWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTI 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 699257011 241 VFLGPYNNPMHPEMFTTNFMLKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISMPIFMASIPPYT 318
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
NADHdh pfam00146
NADH dehydrogenase;
6-305 1.23e-123

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 356.01  E-value: 1.23e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011    6 IMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLTLAFSL 85
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   86 WIPIPMPHPLI--NMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSFSLQ 163
Cdd:pfam00146  82 FAVIPFGPGLVlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  164 TLITTQEHMWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTIVFL 243
Cdd:pfam00146 162 EIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFL 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 699257011  244 GPYNNPMHPEMFtTNFMLKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:pfam00146 242 GGWLGPFPLPGL-LWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-299 9.00e-113

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 329.78  E-value: 9.00e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   1 MHLINIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLT 80
Cdd:COG1005   10 ITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFI 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  81 LAFSLWIPIPM--PHPLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNG 158
Cdd:COG1005   90 PALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAG 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 159 SFSLQTLITTQE-HMWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNAL 237
Cdd:COG1005  170 SLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSAL 249

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 699257011 238 STIVFLGPYNNPMHPEMFTT-----NFMLKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005  250 ATTLFLGGWLGPFPILPLGGlpgilWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 594.68  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   1 MHLINIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLT 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  81 LAFSLWIPIPMPHPLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 161 SLQTLITTQEHMWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTI 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 699257011 241 VFLGPYNNPMHPEMFTTNFMLKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISMPIFMASIPPYT 318
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 549.11  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   1 MHLINIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLT 80
Cdd:MTH00111   6 LNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALL 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  81 LAFSLWIPIPMPHPLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSF 160
Cdd:MTH00111  86 LALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGY 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 161 SLQTLITTQEHMWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTI 240
Cdd:MTH00111 166 TLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTI 245

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 699257011 241 VFLGPYNNPMHPEMFTTNFMLKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISMPIFMASIPPYT 318
Cdd:MTH00111 246 LFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQL 323
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-316 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 513.40  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   1 MHLINIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLT 80
Cdd:MTH00071   6 SLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALT 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  81 LAFSLWIPIPMPHPLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSF 160
Cdd:MTH00071  86 LALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGF 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 161 SLQTLITTQEHMWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTI 240
Cdd:MTH00071 166 SLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTI 245

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 699257011 241 VFLGPYNNPMHPEMFTTNFMLKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISMPIFMASIPP 316
Cdd:MTH00071 246 LFLGSTYNHLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPP 321
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-316 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 507.22  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   1 MHLINIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLT 80
Cdd:MTH00134   7 THIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALT 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  81 LAFSLWIPIPMPHPLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSF 160
Cdd:MTH00134  87 LALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGF 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 161 SLQTLITTQEHMWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTI 240
Cdd:MTH00134 167 TLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAI 246

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 699257011 241 VFLGPYNNPMHPEMFTTNFMLKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISMPIFMASIPP 316
Cdd:MTH00134 247 LFLGASHIPTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPP 322
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 3-318 2.73e-149

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 422.08  E-value: 2.73e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   3 LINIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLTLA 82
Cdd:MTH00040   7 LINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLA 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  83 FSLWIPIPMPHPLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSFSL 162
Cdd:MTH00040  87 LLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSL 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 163 QTLITTQEHMWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTIVF 242
Cdd:MTH00040 167 SSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILF 246

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 699257011 243 LGPyNNPMhPEMFTTNFM---LKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISMPIFMASIPPYT 318
Cdd:MTH00040 247 LGG-GSPF-NEIFPINIIivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPPNY 323
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 2-316 2.86e-149

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 421.63  E-value: 2.86e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   2 HLINIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLTL 81
Cdd:MTH00218   4 SLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  82 AFSLWIPIPMPHPLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSFS 161
Cdd:MTH00218  84 ALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFS 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 162 LQTLITTQEHMWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTIV 241
Cdd:MTH00218 164 LEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVIL 243

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 699257011 242 FLGPYNNpmhpemfTTNFMLKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISMPIFMASIPP 316
Cdd:MTH00218 244 FLGTSLT-------TINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
NADHdh pfam00146
NADH dehydrogenase;
6-305 1.23e-123

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 356.01  E-value: 1.23e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011    6 IMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLTLAFSL 85
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   86 WIPIPMPHPLI--NMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSFSLQ 163
Cdd:pfam00146  82 FAVIPFGPGLVlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  164 TLITTQEHMWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTIVFL 243
Cdd:pfam00146 162 EIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFL 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 699257011  244 GPYNNPMHPEMFtTNFMLKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:pfam00146 242 GGWLGPFPLPGL-LWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 1-302 2.53e-121

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 350.71  E-value: 2.53e-121
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   1 MHLINIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLT 80
Cdd:MTH00143   2 VSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  81 LAFSLWIPIPMPHPLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSF 160
Cdd:MTH00143  82 LALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSF 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 161 SLQTLITTQEHMWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTI 240
Cdd:MTH00143 162 SFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVV 241

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 699257011 241 VFLGpyNNPMHPEMFTTNFMLKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCM 302
Cdd:MTH00143 242 LFFG--GSSVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILV 301
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 1-313 4.80e-121

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 349.81  E-value: 4.80e-121
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   1 MHLINIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLT 80
Cdd:MTH00195   3 ISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALA 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  81 LAFSLWIPIPMPHPLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSF 160
Cdd:MTH00195  83 LALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSF 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 161 SLQTLITTQEHMWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTI 240
Cdd:MTH00195 163 DFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTI 242

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 699257011 241 VFLGPYNNPMhpemfttnFMLKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISMPIFMAS 313
Cdd:MTH00195 243 LFLGGGGTII--------VALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-311 2.69e-118

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 342.90  E-value: 2.69e-118
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   1 MHLINIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLT 80
Cdd:MTH00193   3 MMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLF 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  81 LAFSLWIPIPMPHPLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSF 160
Cdd:MTH00193  83 LSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSF 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 161 SLQTLITTQEHMWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTI 240
Cdd:MTH00193 163 NLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVL 242

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 699257011 241 VFLGPYNNPMhpemfttNFMLKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISMPIFM 311
Cdd:MTH00193 243 MFLGGDLLSL-------LFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-306 3.36e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 329.69  E-value: 3.36e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   1 MHLINIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLT 80
Cdd:MTH00225   2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  81 LAFSLWIPIPMPHPLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSF 160
Cdd:MTH00225  82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 161 SLQTLITTQEHMWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTI 240
Cdd:MTH00225 162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 699257011 241 VFLGPYNNpmhpeMFTTNFMLKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYIS 306
Cdd:MTH00225 242 LFFGGFFV-----TIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLI 302
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 1-317 3.86e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 330.54  E-value: 3.86e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   1 MHLINIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLT 80
Cdd:MTH00054   3 IIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLT 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  81 LAFSLWIPIPMPHP--LINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNG 158
Cdd:MTH00054  83 LAFIAWGVIPYGEGvvLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVG 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 159 SFSLQTLITTQEHMWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALS 238
Cdd:MTH00054 163 SLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFG 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 239 TIVFLGPYNNPMHPEMFTTNFML---KTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISMPIFMASIP 315
Cdd:MTH00054 243 VILFLGGWLVISGPTSYFSNFVWfgiKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALP 322


                 ..
gi 699257011 316 PY 317
Cdd:MTH00054 323 PF 324
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-299 9.00e-113

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 329.78  E-value: 9.00e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   1 MHLINIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLT 80
Cdd:COG1005   10 ITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFI 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  81 LAFSLWIPIPM--PHPLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNG 158
Cdd:COG1005   90 PALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAG 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 159 SFSLQTLITTQE-HMWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNAL 237
Cdd:COG1005  170 SLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSAL 249

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 699257011 238 STIVFLGPYNNPMHPEMFTT-----NFMLKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005  250 ATTLFLGGWLGPFPILPLGGlpgilWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 3-316 1.12e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 324.38  E-value: 1.12e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   3 LINIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLTLA 82
Cdd:MTH00216   9 LIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLA 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  83 FSLWIPIPMPHPLI--NMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSF 160
Cdd:MTH00216  89 LIVWGVIPYERGVLisDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSL 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 161 SLQTLITTQEH-MWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALST 239
Cdd:MTH00216 169 SITEIVLAQNNgIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTT 248

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 699257011 240 IVFLGPYNNPMhPEMFTTN--FMLKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISMPIFMASIPP 316
Cdd:MTH00216 249 ILFLGGWLSPI-KYFKGGAgwFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFNGPPP 326
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
3-303 4.45e-106

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 312.51  E-value: 4.45e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   3 LINIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLTLA 82
Cdd:PRK06076  13 LLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPA 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  83 FSLWIPIPM-PH-PLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSF 160
Cdd:PRK06076  93 FLAWAVIPFgPElVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSL 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 161 SLQTLITTQEHMWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTI 240
Cdd:PRK06076 173 NLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITT 252

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 699257011 241 VFLGPYNNPMHPEMFTTN---FMLKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMW 303
Cdd:PRK06076 253 LFLGGWLPPFPLGGGIPGaiwFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 4-311 3.12e-95

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 284.37  E-value: 3.12e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   4 INIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLTLAF 83
Cdd:MTH00010   7 ISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILAL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  84 SLWIPIPMPHPLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSFSLQ 163
Cdd:MTH00010  87 LLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFS 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 164 TLITTQeHMWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTIVFL 243
Cdd:MTH00010 167 KIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFT 245

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 244 gpynnPMHPEMFTTNFML--KTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMwyISMPIFM 311
Cdd:MTH00010 246 -----SFIPSIFISDLMLilKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLM--ISIPIMF 308
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 4-316 4.26e-91

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 274.97  E-value: 4.26e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   4 INIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLTLAF 83
Cdd:MTH00029  11 IKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAI 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  84 SLWIPIPMPHP--LINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSFS 161
Cdd:MTH00029  91 LAWAIVTMDQGvfLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLN 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 162 LQTLITTQEHMWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTIV 241
Cdd:MTH00029 171 ISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIF 250

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 242 FLGPYNNPMH-----PEMFTTN-----------FMLKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:MTH00029 251 FLGGWLSPLDgiptpPEAFSIFeqiasskssfwFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTA 330

                        330
                 ....*....|.
gi 699257011 306 SMPIFMASIPP 316
Cdd:MTH00029 331 GILIGFNGVPP 341
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 5-307 5.10e-65

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 206.29  E-value: 5.10e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   5 NIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLTLAFS 84
Cdd:MTH00090   1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  85 LWIPIPMPHPLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSFSLqt 164
Cdd:MTH00090  81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSF-- 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 165 litTQEHMWLLFASWplaMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTIVFlg 244
Cdd:MTH00090 159 ---VSSFSLSLFVIY---LPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLF-- 230

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 699257011 245 pynnpmhpemFTTNFMLKTLILtSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISM 307
Cdd:MTH00090 231 ----------FKFSFLMLFLIF-SLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVL 282
ndhA CHL00032
NADH dehydrogenase subunit 1
 3-298 5.56e-54

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 180.15  E-value: 5.56e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   3 LINIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLTLA 82
Cdd:CHL00032  30 LVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISI 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  83 FSLWIPIPMPHPLI--NMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSF 160
Cdd:CHL00032 110 LLSYLVIPFGYHLVlaDLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSL 189

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 161 SLQTLITTQEHMWllFASWPL------AMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILM 234
Cdd:CHL00032 190 STVDIVEAQSKYG--FWGWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVS 267

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 235 NALSTIVFLGPYNNPM----HPEMFTTNFMLK----------TLILTSLFLWV----RASYPRFRYDQLMHLLWKNFLPL 296
Cdd:CHL00032 268 SLFVTVLYLGGWNLSIpyifIPELFEINKTGGvfgttigifiTLAKTYLFLFIsittRWTLPRLRMDQLLNLGWKFLLPI 347


                 ..
gi 699257011 297 TL 298
Cdd:CHL00032 348 SL 349
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 10-298 8.94e-52

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 172.42  E-value: 8.94e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  10 LIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLTLAFSLWIPI 89
Cdd:MTH00058  11 LLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIY 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  90 PMPHPLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSFSLQTLITTQ 169
Cdd:MTH00058  91 GSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSG 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 170 EHMWLLFasWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTIVFLGpynnp 249
Cdd:MTH00058 171 WLSVLLF--PLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFG----- 243

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 699257011 250 mhpEMFTTNFMLKTLIltsLFLWVRASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:MTH00058 244 ---GGFVSIMLLFHLL---FFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
3-305 2.58e-32

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 121.83  E-value: 2.58e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011   3 LINIMMLLIPILIAMA---FLTLVERKILGYMQLRKGPnivgpcGILQPFADAMKLFIKEPLRPlATSTTLFIMAPTLSL 79
Cdd:COG0650    1 MMLILLALLQLLLALLlapLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVP-ETASWLFRAAPYVAL 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011  80 --TLAFSLWIPIPMPHPLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMN 157
Cdd:COG0650   74 aaMLLAALLVPVLTTGPPLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699257011 158 GSFSLQTLITTQEH---MWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILM 234
Cdd:COG0650  154 GSTSLSDIVAYQAAhgpLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 699257011 235 NALSTIVFLgPYNNPMHPEMFTTNFMLKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:COG0650  234 LSLFVNLFL-PWGIALTLLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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