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Conserved domains on  [gi|813424639|ref|YP_009132306|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Penaeus penicillatus]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 1.64e-46

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 145.30  E-value: 1.64e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   3 ILLVSILITLIISVVVMILASLLAKKTIMDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAIIVN 82
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 813424639  83 FSNISAWAFTGFTFILILLIGLYHEWNQGALEW 115
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 1.64e-46

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 145.30  E-value: 1.64e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   3 ILLVSILITLIISVVVMILASLLAKKTIMDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAIIVN 82
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 813424639  83 FSNISAWAFTGFTFILILLIGLYHEWNQGALEW 115
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 8.53e-28

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 97.49  E-value: 8.53e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   19 MILASLLAKKTImDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAiiVNFSNISAWAFTG-FTFI 97
Cdd:pfam00507   1 LLLSRLLGPKRP-NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWA--VSFRELGWFGFVEmLIFI 77

                          90
                  ....*....|....*..
gi 813424639   98 LILLIGLYHEWNQGALE 114
Cdd:pfam00507  78 AILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 2-115 1.21e-27

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 97.88  E-value: 1.21e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   2 IILLVSILITLIISVVVMILASLLAKKTiMDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAiiV 81
Cdd:COG0838    6 LPILIFLLVALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWA--V 82

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 813424639  82 NFSNISAWAFTG-FTFILILLIGLYHEWNQGALEW 115
Cdd:COG0838   83 VFRELGWFGLIEmLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 1.64e-46

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 145.30  E-value: 1.64e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   3 ILLVSILITLIISVVVMILASLLAKKTIMDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAIIVN 82
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 813424639  83 FSNISAWAFTGFTFILILLIGLYHEWNQGALEW 115
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 6.09e-44

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 139.22  E-value: 6.09e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   1 MIILLVSILITLIISVVVMILASLLAKKTIMDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAII 80
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 813424639  81 VNFSNISAWAFTGFTFILILLIGLYHEWNQGALEWA 116
Cdd:MTH00148  81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-117 1.32e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 125.49  E-value: 1.32e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   1 MIILLVSILITLIISVVVMILASLLAKKTIMDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAII 80
Cdd:MTH00202   1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 813424639  81 VNFSNISAWAFTGFTFILILLIGLYHEWNQGALEWAY 117
Cdd:MTH00202  81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-116 4.44e-34

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 114.19  E-value: 4.44e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   1 MIILLVSILITLIISVVVMILASLLAKKTIMDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAII 80
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 813424639  81 VNFSNISAWAFTGFTFILILLIGLYHEWNQGALEWA 116
Cdd:MTH00012  81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 8.69e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 108.08  E-value: 8.69e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   1 MIILLVSILITLIISVVVMILASLLAKKTiMDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAII 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMT-PDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWG 79

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 813424639  81 VNFSNISAwAFTGFTFILILL-IGLYHEWNQGALEWA 116
Cdd:MTH00136  80 DQLPSPLL-TFFWATAVLILLtLGLIYEWLQGGLEWA 115
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 8-116 6.94e-30

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 103.42  E-value: 6.94e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   8 ILITLIISVVVMILASLLAKkTIMDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAIIVNFSNIS 87
Cdd:MTH00113   7 LTISLALSTILTTLNFWLTQ-TKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLTTPT 85

                         90       100
                 ....*....|....*....|....*....
gi 813424639  88 AWAFTGFTFILILLIGLYHEWNQGALEWA 116
Cdd:MTH00113  86 TTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 1.13e-29

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 102.75  E-value: 1.13e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   1 MIILLVSILITLIISVVVMILASLLAKKTImDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAII 80
Cdd:MTH00042   1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 813424639  81 VNFSNISAWAFTGFTFILILLIGLYHEWNQGALEWA 116
Cdd:MTH00042  80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWA 115
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-116 3.38e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 101.55  E-value: 3.38e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   1 MIILLVSILITLIIsvvvMILASLLAKKTIMdREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAII 80
Cdd:MTH00106   4 MLTLLTNTLLASLL----VLIAFWLPQLNIY-SEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 813424639  81 VNFSNISAWAFTGFTFILILLIGLYHEWNQGALEWA 116
Cdd:MTH00106  79 SQTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWT 114
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 8.53e-28

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 97.49  E-value: 8.53e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   19 MILASLLAKKTImDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAiiVNFSNISAWAFTG-FTFI 97
Cdd:pfam00507   1 LLLSRLLGPKRP-NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWA--VSFRELGWFGFVEmLIFI 77

                          90
                  ....*....|....*..
gi 813424639   98 LILLIGLYHEWNQGALE 114
Cdd:pfam00507  78 AILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 2-115 1.21e-27

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 97.88  E-value: 1.21e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   2 IILLVSILITLIISVVVMILASLLAKKTiMDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAiiV 81
Cdd:COG0838    6 LPILIFLLVALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWA--V 82

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 813424639  82 NFSNISAWAFTG-FTFILILLIGLYHEWNQGALEW 115
Cdd:COG0838   83 VFRELGWFGLIEmLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-116 2.18e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 96.99  E-value: 2.18e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   3 ILLVSILITLIISVVVMILASLLAKKTiMDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAIIVN 82
Cdd:MTH00069   1 LIMLMLLISTILSLILITISFWLPLNN-PDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQ 79

                         90       100       110
                 ....*....|....*....|....*....|....
gi 813424639  83 FSNISAWAFTGFTFILILLIGLYHEWNQGALEWA 116
Cdd:MTH00069  80 LNTPTNTLFWSTLILILLTLGLIYEWIQGGLEWA 113
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-115 2.20e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 94.58  E-value: 2.20e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   1 MIILLVSILITLIISVVVMILASLLAKkTIMDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAII 80
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPK-VNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWS 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 813424639  81 VNFSNISAWAftGFTFILILLIGLYHEWNQGALEW 115
Cdd:MTH00203  80 NQLSSLSLLL--AFLFLILLTLGLIYEWLQGGLEW 112
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 4-116 8.31e-26

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 93.00  E-value: 8.31e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   4 LLVSILITLIISVVVMILASLLAKKTiMDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAiiVNF 83
Cdd:PRK06602  11 FLIFLIVAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWA--VSF 87

                         90       100       110
                 ....*....|....*....|....*....|....
gi 813424639  84 SNISAWAFTGFT-FILILLIGLYHEWNQGALEWA 116
Cdd:PRK06602  88 REIGWLGFVEAMiFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 2-115 1.80e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 79.37  E-value: 1.80e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   2 IILLVSILITLIISVvvmilASLLAKKTIMDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAIIV 81
Cdd:MTH00055  10 ILLLFSIGLSTVISG-----ASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVY 84

                         90       100       110
                 ....*....|....*....|....*....|....
gi 813424639  82 NFSNISAWaFTGFTFILILLIGLYHEWNQGALEW 115
Cdd:MTH00055  85 NQIGLFGF-WVMYLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 7-115 4.17e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 78.56  E-value: 4.17e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   7 SILITLIISVVVMIL---ASLLAKKTIMDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAiiVNF 83
Cdd:MTH00018   2 GLFILLIFSVVLSALfsgASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWC--VLY 79

                         90       100       110
                 ....*....|....*....|....*....|...
gi 813424639  84 SNISAWAF-TGFTFILILLIGLYHEWNQGALEW 115
Cdd:MTH00018  80 NQIAPFGFwTMVGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 5-115 3.88e-18

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 73.81  E-value: 3.88e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   5 LVSILITLIISVVVMILASLLAKKTIMDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAIIVNFS 84
Cdd:MTH00030  13 LLGVGIILLLVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQL 92

                         90       100       110
                 ....*....|....*....|....*....|.
gi 813424639  85 NISAWaFTGFTFILILLIGLYHEWNQGALEW 115
Cdd:MTH00030  93 NLFSF-WIVYTFLIVLAIGLAYEWIKGGLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 7-115 1.08e-16

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 70.02  E-value: 1.08e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   7 SILITLIISVVVMILASLLAK---KTIMDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAIIVNF 83
Cdd:CHL00022   9 IFWAFLIISSLIPILAFLISGllaPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDV 88

                         90       100       110
                 ....*....|....*....|....*....|..
gi 813424639  84 SNISAWaFTGFTFILILLIGLYHEWNQGALEW 115
Cdd:CHL00022  89 LGVSAF-IEALIFVLILIVGLVYAWRKGALEW 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
2-115 3.74e-11

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 55.90  E-value: 3.74e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   2 IILLVSILITLIISVVVMILASLLaKKTIMDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAiiV 81
Cdd:PRK07756  10 MIVLIFLLLGILLPVVALTLGRML-RPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWA--V 86

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 813424639  82 NFSNISAWAFTG-FTFILILLIGLYHEWNQGALEW 115
Cdd:PRK07756  87 AYDKLGLFALIEmLIFVVMLLVGLAYAWKKKVLQW 121
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 4-115 9.15e-11

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 54.68  E-value: 9.15e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   4 LLVSILITLIISVVVMILASLLAKKTiMDREKNSPFECGFDPKGSARLP--FSLRFFLIAVIFLIFDVEITLLLPLAiiV 81
Cdd:PRK07928   7 ILVLGALAAAFAVVSVVVASLVGPKR-YNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWA--V 83

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 813424639  82 NFSNISAWAFTGFT-FILILLIGLYHEWNQGALEW 115
Cdd:PRK07928  84 SFDALGVFGLVEMAlFMLTVFVAYAYVWRRGGLEW 118
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
9-115 2.93e-10

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 53.52  E-value: 2.93e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   9 LITLIISVVVMILASLLAKKTI-MDRE--KNSPFECGFDP-KGSARLpfSLRFFLIAVIFLIFDVEITLLLPLAiiVNFS 84
Cdd:PRK08489  18 VLTFVAFFLTTRLARFISRKLAqKNTEklKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFPWA--VDFK 93

                         90       100       110
                 ....*....|....*....|....*....|..
gi 813424639  85 NISAWAFTG-FTFILILLIGLYHEWNQGALEW 115
Cdd:PRK08489  94 LLGLFGLIEmLLFIVLLTIGFIYAWKKGALEW 125
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 1-117 2.33e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 45.66  E-value: 2.33e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   1 MIILLVSILITLIISVVVMILASLL--AKKTIMDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLA 78
Cdd:MTH00060   1 MLVLLFVFFVFFLLFLVIYFFHSGLwnNKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 813424639  79 I-IVNFSNISAWAFtgftFILILLIGLYHEWNQGALEWAY 117
Cdd:MTH00060  81 FqGLLFYNFWYYYF----FLLLLFLGFVVELFSGYVRWVY 116
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-115 9.75e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 41.42  E-value: 9.75e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813424639   1 MIILLVSILITLIISVVVMILASLLAKKTiMDREKNSPFECGFDPKGSARLPFSLRFFLIAVIFLIFDVEITLLLPLAII 80
Cdd:MTH00092   1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 813424639  81 VNFSNISAWAFTGFTFilillIGLYHEWNQGALEW 115
Cdd:MTH00092  80 DFSSLISFFMLMIFIF-----FGFYMEWWYGKLIW 109
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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