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Conserved domains on  [gi|953245207|ref|YP_009180465|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Mandrillus leucophaeus]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009566)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177166  Cd Length: 318  Bit Score: 551.92  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   1 MTTMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFS 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  81 IALLLWTPLPMPNALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 161 NLNMLITTQEYLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTT 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 953245207 241 IFLGTFYPIHSPELFTTCFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLMWNTSTPIAISSIPPQT 318
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 551.92  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   1 MTTMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFS 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  81 IALLLWTPLPMPNALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 161 NLNMLITTQEYLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTT 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 953245207 241 IFLGTFYPIHSPELFTTCFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLMWNTSTPIAISSIPPQT 318
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
NADHdh pfam00146
NADH dehydrogenase;
6-303 1.12e-117

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 340.99  E-value: 1.12e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207    6 LLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFSIALLL 85
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   86 WTPLPMPN--ALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLN 163
Cdd:pfam00146  82 FAVIPFGPglVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  164 MLITTQEYLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFL 243
Cdd:pfam00146 162 EIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFL 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 953245207  244 GTFY-PIHSPELFTtcFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLMW 303
Cdd:pfam00146 242 GGWLgPFPLPGLLW--FLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 6-303 2.54e-108

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 318.23  E-value: 2.54e-108
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   6 LLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFSIALLL 85
Cdd:COG1005   15 ALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLA 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  86 WTPLPM--PNALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLN 163
Cdd:COG1005   95 FAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLS 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 164 MLITTQEYLWLLLPSWPLA-MMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIF 242
Cdd:COG1005  175 EIVEAQAGGLWFILPQPLAfVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLF 254

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 953245207 243 LGTFYPIHSPELFTT-----CFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLMW 303
Cdd:COG1005  255 LGGWLGPFPILPLGGlpgilWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 551.92  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   1 MTTMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFS 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  81 IALLLWTPLPMPNALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 161 NLNMLITTQEYLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTT 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 953245207 241 IFLGTFYPIHSPELFTTCFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLMWNTSTPIAISSIPPQT 318
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-318 9.69e-176

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 489.02  E-value: 9.69e-176
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   1 MTTMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFS 80
Cdd:MTH00111   6 LNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALL 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  81 IALLLWTPLPMPNALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSF 160
Cdd:MTH00111  86 LALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGY 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 161 NLNMLITTQEYLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTT 240
Cdd:MTH00111 166 TLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTI 245

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 953245207 241 IFLGTFYPIHSPELFTTCFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLMWNTSTPIAISSIPPQT 318
Cdd:MTH00111 246 LFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQL 323
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-317 2.44e-165

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 462.55  E-value: 2.44e-165
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   1 MTTMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFS 80
Cdd:MTH00071   6 SLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALT 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  81 IALLLWTPLPMPNALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSF 160
Cdd:MTH00071  86 LALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGF 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 161 NLNMLITTQEYLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTT 240
Cdd:MTH00071 166 SLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTI 245

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 953245207 241 IFLGTFYPIHSPELFTTCFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLMWNTSTPIAISSIPPQ 317
Cdd:MTH00071 246 LFLGSTYNHLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPPM 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 4-318 2.38e-160

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 450.21  E-value: 2.38e-160
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   4 MNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFSIAL 83
Cdd:MTH00134  10 INPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLAL 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  84 LLWTPLPMPNALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLN 163
Cdd:MTH00134  90 TLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQ 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 164 MLITTQEYLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFL 243
Cdd:MTH00134 170 TFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFL 249

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 953245207 244 GTFYPIHSPELFTTCFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLMWNTSTPIAISSIPPQT 318
Cdd:MTH00134 250 GASHIPTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPPQL 324
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 5-316 6.35e-140

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 398.19  E-value: 6.35e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   5 NLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFSIALL 84
Cdd:MTH00040   9 NLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALL 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  85 LWTPLPMPNALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLNM 164
Cdd:MTH00040  89 LWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSS 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 165 LITTQEYLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFLG 244
Cdd:MTH00040 169 ISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLG 248

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 953245207 245 TFYPIHS-PELFTTCFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLMWNTSTPIAISSIPP 316
Cdd:MTH00040 249 GGSPFNEiFPINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 4-316 2.27e-137

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 391.20  E-value: 2.27e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   4 MNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFSIAL 83
Cdd:MTH00218   6 INLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLAL 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  84 LLWTPLPMPNALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLN 163
Cdd:MTH00218  86 LLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLE 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 164 MLITTQEYLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFL 243
Cdd:MTH00218 166 GFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFL 245

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 953245207 244 GTFYPIHSpelfttcFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLMWNTSTPIAISSIPP 316
Cdd:MTH00218 246 GTSLTTIN-------LMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
NADHdh pfam00146
NADH dehydrogenase;
6-303 1.12e-117

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 340.99  E-value: 1.12e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207    6 LLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFSIALLL 85
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   86 WTPLPMPN--ALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLN 163
Cdd:pfam00146  82 FAVIPFGPglVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  164 MLITTQEYLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFL 243
Cdd:pfam00146 162 EIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFL 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 953245207  244 GTFY-PIHSPELFTtcFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLMW 303
Cdd:pfam00146 242 GGWLgPFPLPGLLW--FLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-302 5.08e-117

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 339.44  E-value: 5.08e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   1 MTTMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFS 80
Cdd:MTH00193   3 MMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLF 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  81 IALLLWTPLPMPNALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSF 160
Cdd:MTH00193  83 LSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSF 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 161 NLNMLITTQEYLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTT 240
Cdd:MTH00193 163 NLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVL 242

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 953245207 241 IFLGTfypihspELFTTCFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLM 302
Cdd:MTH00193 243 MFLGG-------DLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLL 297
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 7-302 1.11e-116

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 338.77  E-value: 1.11e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   7 LLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFSIALLLW 86
Cdd:MTH00143   8 VFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLW 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  87 TPLPMPNALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLNMLI 166
Cdd:MTH00143  88 QLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEIS 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 167 TTQEYLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFLGTF 246
Cdd:MTH00143 168 ESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGS 247

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 953245207 247 YPIhsPELFTTCFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLM 302
Cdd:MTH00143 248 SVL--FLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILV 301
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 1-313 4.63e-115

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 334.79  E-value: 4.63e-115
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   1 MTTMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFS 80
Cdd:MTH00195   3 ISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALA 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  81 IALLLWTPLPMPNALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSF 160
Cdd:MTH00195  83 LALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSF 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 161 NLNMLITTQEYLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTT 240
Cdd:MTH00195 163 DFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTI 242

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 953245207 241 IFLGTFYpihspelfTTCFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLMWNTSTPIAISS 313
Cdd:MTH00195 243 LFLGGGG--------TIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-301 1.76e-108

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 317.75  E-value: 1.76e-108
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   1 MTTMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFS 80
Cdd:MTH00225   2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  81 IALLLWTPLPMPNALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSF 160
Cdd:MTH00225  82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 161 NLNMLITTQEYLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTT 240
Cdd:MTH00225 162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 953245207 241 IFLGTFYpihspELFTTCFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALL 301
Cdd:MTH00225 242 LFFGGFF-----VTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYL 297
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 6-303 2.54e-108

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 318.23  E-value: 2.54e-108
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   6 LLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFSIALLL 85
Cdd:COG1005   15 ALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLA 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  86 WTPLPM--PNALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLN 163
Cdd:COG1005   95 FAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLS 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 164 MLITTQEYLWLLLPSWPLA-MMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIF 242
Cdd:COG1005  175 EIVEAQAGGLWFILPQPLAfVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLF 254

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 953245207 243 LGTFYPIHSPELFTT-----CFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLMW 303
Cdd:COG1005  255 LGGWLGPFPILPLGGlpgilWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 1-316 6.51e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 307.04  E-value: 6.51e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   1 MTTMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFS 80
Cdd:MTH00054   3 IIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLT 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  81 IALLLWTPLPMPNA--LANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSG 158
Cdd:MTH00054  83 LAFIAWGVIPYGEGvvLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVG 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 159 SFNLNMLITTQEYLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALT 238
Cdd:MTH00054 163 SLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFG 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 239 TTIFLGTFYPIHSPELFTT---CFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLMWNTSTPIAISSIP 315
Cdd:MTH00054 243 VILFLGGWLVISGPTSYFSnfvWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALP 322


                 .
gi 953245207 316 P 316
Cdd:MTH00054 323 P 323
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 3-316 3.28e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 305.12  E-value: 3.28e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   3 TMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFSIA 82
Cdd:MTH00216   9 LIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLA 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  83 LLLWTPLPMP--NALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSF 160
Cdd:MTH00216  89 LIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSL 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 161 NLNMLITTQ-EYLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTT 239
Cdd:MTH00216 169 SITEIVLAQnNGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTT 248

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 953245207 240 TIFLGTFY-PIHSPELFTTCFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLMWNTSTPIAISSIPP 316
Cdd:MTH00216 249 ILFLGGWLsPIKYFKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFNGPPP 326
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
7-303 1.37e-102

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 303.65  E-value: 1.37e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   7 LLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFSIALLLW 86
Cdd:PRK06076  17 VVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAW 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  87 TPLPM-PN-ALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLNM 164
Cdd:PRK06076  97 AVIPFgPElVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSD 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 165 LITTQEYLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFLG 244
Cdd:PRK06076 177 IVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLG 256

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 953245207 245 TFYPIHSPELFT---TCFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLMW 303
Cdd:PRK06076 257 GWLPPFPLGGGIpgaIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 6-302 3.14e-89

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 268.96  E-value: 3.14e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   6 LLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFSIALLL 85
Cdd:MTH00010   9 ILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLL 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  86 WTPLPMPNALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLNML 165
Cdd:MTH00010  89 WSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKI 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 166 ITTQeYLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFLGT 245
Cdd:MTH00010 169 IMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSF 247

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 953245207 246 FYPIHSPELFttcFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLM 302
Cdd:MTH00010 248 IPSIFISDLM---LILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLM 301
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 3-316 8.41e-88

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 266.50  E-value: 8.41e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   3 TMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFSIA 82
Cdd:MTH00029  10 TIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLA 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  83 LLLWTPLPMPNA--LANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSF 160
Cdd:MTH00029  90 ILAWAIVTMDQGvfLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSL 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 161 NLNMLITTQEYLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTT 240
Cdd:MTH00029 170 NISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTI 249

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 241 IFLGTFYP-----IHSPELFTTC-----------FTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLMWN 304
Cdd:MTH00029 250 FFLGGWLSpldgiPTPPEAFSIFeqiasskssfwFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILT 329

                        330
                 ....*....|..
gi 953245207 305 TSTPIAISSIPP 316
Cdd:MTH00029 330 AGILIGFNGVPP 341
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 5-302 5.39e-59

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 190.88  E-value: 5.39e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   5 NLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFSIALL 84
Cdd:MTH00090   1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  85 LWTPLPMPNALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLNm 164
Cdd:MTH00090  81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFV- 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 165 littqeyLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFLG 244
Cdd:MTH00090 160 -------SSFSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK 232

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 953245207 245 TFYPIhspelfttcfttkTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLM 302
Cdd:MTH00090 233 FSFLM-------------LFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLG 277
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 7-298 8.90e-47

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 159.32  E-value: 8.90e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   7 LLLIMstlAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFSIALLLW 86
Cdd:MTH00058  11 LLIIL---LLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYC 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  87 TPLPMPNALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLNMLi 166
Cdd:MTH00058  88 FIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDF- 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 167 tTQEYLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFLGTF 246
Cdd:MTH00058 167 -YYSGWLSVLLFPLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGG 245

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 953245207 247 ypihspelFTTCFTTKTLLmtsLFLWTRATYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:MTH00058 246 --------FVSIMLLFHLL---FFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
ndhA CHL00032
NADH dehydrogenase subunit 1
 6-306 1.06e-46

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 161.27  E-value: 1.06e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   6 LLLLIMSTLAAMAFLTLvERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFSIALLL 85
Cdd:CHL00032  34 LTLVLGITIGVLVIVWL-EREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLS 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  86 WTPLPMPN--ALANFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLN 163
Cdd:CHL00032 113 YLVIPFGYhlVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTV 192

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 164 MLITTQ-EYLWLLLPSWPLAM---MWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTT 239
Cdd:CHL00032 193 DIVEAQsKYGFWGWNLWRQPIgfiVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVT 272

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 240 TIFLGTFYP----IHSPELF----------TTCFTTKTLLMTSLFLW----TRATYPRFRYDQLMHLLWKNFLPLTLALL 301
Cdd:CHL00032 273 VLYLGGWNLsipyIFIPELFeinktggvfgTTIGIFITLAKTYLFLFisitTRWTLPRLRMDQLLNLGWKFLLPISLGNL 352


                 ....*
gi 953245207 302 MWNTS 306
Cdd:CHL00032 353 LLTTS 357
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
4-303 3.21e-32

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 121.44  E-value: 3.21e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207   4 MNLLLLIMSTLAAMA---FLTLVERKLLGYMQLRKGPnivgpyGLLQPFADAMKLFTKEPLKPSTSTTILYItAPALAFS 80
Cdd:COG0650    2 MLILLALLQLLLALLlapLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWLFRA-APYVALA 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207  81 IALLLWTPLPMPNALANFNLGLLFILATSSLTVHSIL--WSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSG 158
Cdd:COG0650   75 AMLLAALLVPVLTTGPPLSFSGDLIVLVYLLALARFFlaLAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAG 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245207 159 SFNLNMLITTQEYLWLLLPSWPL---AMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMN 235
Cdd:COG0650  155 STSLSDIVAYQAAHGPLLLSPSLllaAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLL 234

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 953245207 236 ALTTTIFLGtfYPIHSPELFTTC-FTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLMW 303
Cdd:COG0650  235 SLFVNLFLP--WGIALTLLLALLlFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLA 301
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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