|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-436 |
1.29e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 335.59 E-value: 1.29e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 1 MLIMFSMIFFSLKIKSWWLAQNFFFFFFFFMYFKIPMFNYFLNVSYLFGMDMFSYLMFMLGVWIISLVYIPSLNFK--NN 78
Cdd:MTH00163 5 LFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYkkNN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 79 YLNYFNFLMFTFIIIFYFCFFSNNFILFYIFYEINLIPIIILIYGWGYQYERFKAGFYLFIYMIFFSLPFFSCLLSLNNF 158
Cdd:MTH00163 85 YSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 159 -NFMFMYYFDYLNNLNFYYYLFLMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKINLK 237
Cdd:MTH00163 165 sGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSKLGLK 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 238 LNYLFISLCLLGMMILSLVCFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMR 317
Cdd:MTH00163 245 FNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYER 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 318 FKSRSMFLNKGLINIFPFLSFWWFLLCSSNMSFPPSLNLFGELFLLISLMIWLDYFYILYLLIMILMFLYSLYLYLYTQY 397
Cdd:MTH00163 325 LGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYSYSQH 404
|
410 420 430
....*....|....*....|....*....|....*....
gi 1011057405 398 GKLFFNMNYLVYINLSEYLLLFMHWLPLNIIFLILELFF 436
Cdd:MTH00163 405 GKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFM 443
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
38-436 |
5.04e-81 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 255.92 E-value: 5.04e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 38 FNYFLNVSYLFGMDMFSYLMFMLGVWIISLVYIPSLNFKN--NYLNYFNFLMFTFIIIFYFCFFSNNFILFYIFYEINLI 115
Cdd:MTH00150 10 FSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKlrNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 116 PIIILIYGWGYQYERFKAGFYLFIYMIFFSLPFFSCLLSLNN----FNFMFMYYFDYLNNLNFYYYLFLMMIFLVKMPLF 191
Cdd:MTH00150 90 PTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSsygsSFMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMY 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 192 MFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKINLKLNYLFISLCLLGMMILSLVCFFQSDLKILIAYSS 271
Cdd:MTH00150 170 PFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSS 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 272 VVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFLSFWWFLLCSSNMSFP 351
Cdd:MTH00150 250 VGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAP 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 352 PSLNLFGELFLLISLMIWLDYFYILYLLIMILMFLYSLYLYLYTQYGKLFFNMNYLVYINLSEYLLLFMHWLPLNIIFLI 431
Cdd:MTH00150 330 PSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILK 409
|
....*
gi 1011057405 432 LELFF 436
Cdd:MTH00150 410 SDLLF 414
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-436 |
1.50e-77 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 247.97 E-value: 1.50e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 1 MLIMFSMIFFSLKIKSWWLAQNFFFFFFFFMYFKIPMFNYFLNVSYLFGMDMFSYLMFMLGVWIISLVYIPSLN--FKNN 78
Cdd:MTH00205 6 VFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKvfKSNK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 79 YLNYFNFLMFTFIIIFYFCFFSNNFILFYIFYEINLIPIIILIYGWGYQYERFKAGFYLFIYMIFFSLPFFSCLLSLNN- 157
Cdd:MTH00205 86 NSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSl 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 158 ---FNFMFMYYFDYLNNLNFYYYLFLMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKI 234
Cdd:MTH00205 166 nfsLSMFFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 235 NLKLNYLFISLCLLGMMILSLVCFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNIC 314
Cdd:MTH00205 246 NSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVN 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 315 YMRFKSRSMFLNKGLINIFPFLSFWWFLLCSSNMSFPPSLNLFGELFLLISLMIWLDYFYILYLLIMILMFLYSLYLYLY 394
Cdd:MTH00205 326 YERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQ 405
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 1011057405 395 TQYGKLFFNMNYLVYINLSEYLLLFMHWLPLNIIFLILELFF 436
Cdd:MTH00205 406 SQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
100-425 |
3.98e-75 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 241.64 E-value: 3.98e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 100 SNNFILFYIFYEINLIPIIILIYGWGYQYERFKAGFYLFIYMIFFSLPFFSCLLSLNNFN---FMFMYYFDYLNNLNFYY 176
Cdd:MTH00124 112 ATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPLLIAILYLHNQTgtlSLPMLQLTHPTLTNSWT 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 177 YLFL----MMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKINLKLNYLFISLCLLGMMI 252
Cdd:MTH00124 192 NLLLwlacLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFLTLALWGALM 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 253 LSLVCFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINI 332
Cdd:MTH00124 272 TSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLL 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 333 FPFLSFWWFLLCSSNMSFPPSLNLFGELFLLISLMIWLDYFYILYLLIMILMFLYSLYLYLYTQYGKLFFNMNYLVYINL 412
Cdd:MTH00124 352 LPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLSTQRGTLPTHITTIQPTHT 431
|
330
....*....|...
gi 1011057405 413 SEYLLLFMHWLPL 425
Cdd:MTH00124 432 REHLLMTLHIIPL 444
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
36-436 |
4.78e-74 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 238.87 E-value: 4.78e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 36 PMFNYFLNVSYLFGMDMFSYLMFMLGVWIISLVYIPSLNFKNNYLNYFNFLMFTFIIIFYFCF--FSNNFILFYIFYEIN 113
Cdd:MTH00014 43 PMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLtfSASNLLMFYIFFEAS 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 114 LIPIIILIYGWGYQYERFKAGFYLFIYMIFFSLPFFSCLLSL---NNFNFMFMYYF----DYLNNLnfyYYLFLMMIFLV 186
Cdd:MTH00014 123 LIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIfytNNSLSMLMSSMeppsIYLMNL---WWLITILAFMV 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 187 KMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKINLKLNYLFISLCLLGMMILSLVCFFQSDLKIL 266
Cdd:MTH00014 200 KMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 267 IAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFLSFWWFLLCSS 346
Cdd:MTH00014 280 IAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAA 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 347 NMSFPPSLNLFGELFLLISLMIWLDYFYILYLLIMILMFLYSLYLYLYTQYGKLFFNMNYLVYINLSEYLLLFMHWLPLN 426
Cdd:MTH00014 360 NMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLF 439
|
410
....*....|
gi 1011057405 427 IIFLILELFF 436
Cdd:MTH00014 440 ILILKPDLIT 449
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
43-432 |
2.02e-72 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 234.87 E-value: 2.02e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 43 NVSYLFGMDMFSYLMFMLGVWIISLVYIPSLNFKNNY----LNYFNFLMFTFIIIFYFCFFSNNFILFYIFYEINLIPII 118
Cdd:MTH00044 52 NLSLSLATDSLSSPLIILSCWLAPLSLLASINHLSNNspnnQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 119 ILIYGWGYQYERFKAGFYLFIYMIFFSLPFFSCLLSLNNFNFMFMYYFDYLNNLNFYY-------YLFLMMIFLVKMPLF 191
Cdd:MTH00044 132 ILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLSsnsssiwWIFCILAFLVKMPIY 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 192 MFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKINLK-LNYLFISLCLLGMMILSLVCFFQSDLKILIAYS 270
Cdd:MTH00044 212 GFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFSLPSANnISFILIVFCCWGALITSIICLRQTDLKALIAYS 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 271 SVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFLSFWWFLLCSSNMSF 350
Cdd:MTH00044 292 SVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGL 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 351 PPSLNLFGELFLLISLMIWLDYFYILYLLIMILMFLYSLYLYLYTQYGKLFFNMNYLVYINLSEYLLLFMHWLPLniIFL 430
Cdd:MTH00044 372 PPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPL--ILI 449
|
..
gi 1011057405 431 IL 432
Cdd:MTH00044 450 II 451
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
2-436 |
1.24e-70 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 230.19 E-value: 1.24e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 2 LIMFSMIFFSLKIKSWWL--AQNFFFFFFFFMYFKIPmFNYFLNVSYLFGMDMFSYLMFMLGVWIISLVYIPSLN-FKNN 78
Cdd:MTH00068 9 LMLLPTTWLSPKKWLWTLttTNSLIIAFLSLMWFNLP-SETMNFTNKYFGIDQISSPLLILTCWLLPLMILASQNhLKNE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 79 YLNY---FNFLMFTFIIIFYFCFFSNNFILFYIFYEINLIPIIILIYGWGYQYERFKAGFYLFIYMIFFSLPFFSCLLSL 155
Cdd:MTH00068 88 PINRqrtYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLIL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 156 -NNFNFMFMYYFDYLNNLNFYYY------LFLMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVL 228
Cdd:MTH00068 168 qNSLGSLSLILLELMSPMQLMTYtnkiwwLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRIS 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 229 MLIFKINLKLNYLFISLCLLGMMILSLVCFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLF 308
Cdd:MTH00068 248 ILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALF 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 309 CLSNICYMRFKSRSMFLNKGLINIFPFLSFWWFLLCSSNMSFPPSLNLFGELFLLISLMIWLDYFYILYLLIMILMFLYS 388
Cdd:MTH00068 328 CLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYT 407
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1011057405 389 LYLYLYTQYGKLFFNMNYLVYINLSEYLLLFMHWLPLNIIFLILELFF 436
Cdd:MTH00068 408 LYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELIS 455
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
42-430 |
1.57e-69 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 227.47 E-value: 1.57e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 42 LNVSYLFGMDMFSYLMFMLGVWIISLVYIPS--------LNFKNNYLnyfnFLMFTFIIIFYFCFFSNNFILFYIFYEIN 113
Cdd:MTH00110 50 LNFSLLFFSDSLSTPLLILTTWLLPLMLMASqhhlskepLTRKKLYI----TMLILLQLFLIMTFTATELIMFYILFEAT 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 114 LIPIIILIYGWGYQYERFKAGFYLFIYMIFFSLPFFSCLLSLNNF----NFMFM-YYFDYLNNL--NFYYYLFLMMIFLV 186
Cdd:MTH00110 126 LIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNlgslNFLLLqLWAQPLPNSwsNNLLWLACMMAFMV 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 187 KMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKINLKLNYLFISLCLLGMMILSLVCFFQSDLKIL 266
Cdd:MTH00110 206 KMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 267 IAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFLSFWWFLLCSS 346
Cdd:MTH00110 286 IAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLT 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 347 NMSFPPSLNLFGELFLLISLMIWLDYFYILYLLIMILMFLYSLYLYLYTQYGKLFFNMNYLVYINLSEYLLLFMHWLPLN 426
Cdd:MTH00110 366 NLALPPTINLIGELFVIMSSFSWSNITIILMGLNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLL 445
|
....
gi 1011057405 427 IIFL 430
Cdd:MTH00110 446 LLSL 449
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
31-435 |
6.05e-64 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 212.49 E-value: 6.05e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 31 MYFKIPMFNYFLNVSYLFGMDMFSYLMFMLGVWIISLVYIPSLNF----KNNYLNYFNFLMFTFIIIFYFCFFSNNFILF 106
Cdd:MTH00206 38 LWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHmknePINRQRIYITLLIVLQLFLILFFSSSNLLLF 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 107 YIFYEINLIPIIILIYGWGYQYERFKAGFYLFIYMIFFSLPFFSCLLSLNNFNFMFMYYFDYL----NNLNFYYYLFLMM 182
Cdd:MTH00206 118 YILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFskltTWNNNLWWLACIL 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 183 IFLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKINLKLNYLFISLCLLGMMILSLVCFFQSD 262
Cdd:MTH00206 198 AFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTD 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 263 LKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFLSFWWFL 342
Cdd:MTH00206 278 LKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLL 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 343 LCSSNMSFPPSLNLFGELFLLISLMIWLDYFYILYLLIMILMFLYSLYLYLYTQYGKLFFNMNYLVYINLSEYLLLFMHW 422
Cdd:MTH00206 358 FFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHL 437
|
410
....*....|...
gi 1011057405 423 LPLNIIFLILELF 435
Cdd:MTH00206 438 FPVILLILNPNLI 450
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
19-432 |
9.37e-61 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 204.42 E-value: 9.37e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 19 LAQNFFFFFFFFMYFKIPMFNYFLNVSYLFGMDMFSYLMFMLGVWIISLVYIPSLNFKN----NYLNYFNFLMFTFIIIF 94
Cdd:MTH00127 28 LAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILASQNHTApepiNRQRMYITLLTSLQIFL 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 95 YFCFFSNNFILFYIFYEINLIPIIILIYGWGYQYERFKAGFYLFIYMIFFSLPFFSCLLSLNN----FNFMFMYYFDYLN 170
Cdd:MTH00127 108 ILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNstgtLSMLTLQYSQPLQ 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 171 NLNF---YYYLFLMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKINLKLNYLFISLCL 247
Cdd:MTH00127 188 LSSWadkLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILAL 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 248 LGMMILSLVCFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNK 327
Cdd:MTH00127 268 WGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLAR 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 328 GLINIFPFLSFWWFLLCSSNMSFPPSLNLFGELFLLISLMIWLDYFYILYLLIMILMFLYSLYLYLYTQYGKLFFNMNYL 407
Cdd:MTH00127 348 GLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIAL 427
|
410 420
....*....|....*....|....*
gi 1011057405 408 VYINLSEYLLLFMHWLPLniIFLIL 432
Cdd:MTH00127 428 NPSHTREHLLMALHLLPL--LLLIL 450
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
42-365 |
2.83e-43 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 158.32 E-value: 2.83e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 42 LNVSYLFGMDMFSYLMFMLGVWIISLVYIPSLNFKNNYLNYFNFLMFTFIIIFYFCFFSNNFILFYIFYEINLIPIIILI 121
Cdd:COG1008 72 LGISYHLGVDGISLPLVLLTALLTPLAILASWNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 122 YGWGYQyERFKAGFYLFIYMIFFSLPFFSCLLSL------NNFNFMFMYYFDYLNNLNFYYYLFLMMIFLVKMPLFMFHI 195
Cdd:COG1008 152 GIWGGE-RRIYAAIKFFLYTLAGSLLMLVAILALyflagaLTFDIAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHT 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 196 WLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIF-KINLKLNYLFISLCLLGMMILSLVCFFQSDLKILIAYSSVVH 274
Cdd:COG1008 231 WLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFpEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSH 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 275 MGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFLSFWWFLLCSSNMSFPPSL 354
Cdd:COG1008 311 MGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTS 390
|
330
....*....|.
gi 1011057405 355 NLFGELFLLIS 365
Cdd:COG1008 391 GFVGEFLVLLG 401
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
22-405 |
3.97e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 148.13 E-value: 3.97e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 22 NFFFFFFFFMYFKIPMFNYFLNVSYLFGMDMFSYLMFmlgvwIISLVYIPSLNFKNNYLNYFNFLMFTFIIIFYFCFFSN 101
Cdd:MTH00094 8 SPFLFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLL-----IFMMVFILGLVLLSEKNFNLLILSNLLILICLLFFVSS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 102 NFILFYIFYEINLIPIIILIYGWGYQYERFKAGFYLFIYMIFFSLPFFscLLSLNNFNFMFMYYFDYlnNLNFYYYLFLM 181
Cdd:MTH00094 83 NMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFL--FVYLKNFFFFSLCYFDF--FLSWEMFFILS 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 182 MIFLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLmliFKINLKLNYLFISLCLLGMMILSLVCFFQS 261
Cdd:MTH00094 159 LSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRIL---GSLNFVYNNFWIIFSLLGMILSSFCCVFQS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 262 DLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFLSFWWF 341
Cdd:MTH00094 236 DSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFS 315
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1011057405 342 LLCSSNMSFPPSLNLFGELFLLISLMIWLDYFYILYLLIMILMFLYSLYLYLYTQYGKLFFNMN 405
Cdd:MTH00094 316 LVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFN 379
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
100-380 |
3.85e-39 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 142.45 E-value: 3.85e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 100 SNNFILFYIFYEINLIPIIILIYGWGYQYERFKAGFYLFIYMIFFSLP-FFSCLL------SLNNFNFMFMYYFDYLNNL 172
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSIlLFGISLmynytgTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 173 NFYYYLFLMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKINLKLNYLFISLCLLGMMI 252
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 253 LSLVCFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLS-NICYMRFKSRSMFLNKGLIN 331
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1011057405 332 IFPFLSFWWFLLCSSNMSFPPSLNLFGELFLLISLMIWLDYFYILYLLI 380
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVV 289
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
41-364 |
4.65e-38 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 144.19 E-value: 4.65e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 41 FLNVSYLFGMDMFSYLMFMLGVWIISLVYIPSLNFKNNYLNYFNFLMFTFIIIFYFCFFSNNFILFYIFYEINLIPIIIL 120
Cdd:PRK05846 71 RFGISYHLGVDGISLLLVVLTALLTPLAVLASWEEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 121 IYGWGYQyERFKAGFYLFIYMIFFSLPFFSCLLSLNNFNFMFMYYFDYLNNLNF------YYYLFL--MMIFLVKMPLFM 192
Cdd:PRK05846 151 IGVWGGK-NRIYAATKFFLYTLLGSLLMLVAIIYLVVVYYNATGTFDIADLLNLplppgvQYWLFLafFIAFAVKMPMFP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 193 FHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFK-INLKLNYLFISLCLLGMMILSLVCFFQSDLKILIAYSS 271
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 272 VVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFLSFWWFLLCSSNMSFP 351
Cdd:PRK05846 310 ISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLP 389
|
330
....*....|...
gi 1011057405 352 PSLNLFGELFLLI 364
Cdd:PRK05846 390 GTSGFVGEFLILL 402
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
40-363 |
1.64e-36 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 139.69 E-value: 1.64e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 40 YFLNVSYLFGMDMFSYLMFMLGVWIISLVYIPSLNFKNNYLNYFNFLMFTFIIIFYFCFFSNNFILFYIFYEINLIPIII 119
Cdd:TIGR01972 65 PALGISYHLGVDGISLLLVLLTALLTLLAILASWESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 120 LIYGWGYQyERFKAGFYLFIYMIFFSLPFFSCLLSLNNFN-FMFMYYFDYLNNLNFYYYLFLMMIFL----VKMPLFMFH 194
Cdd:TIGR01972 145 LIGVWGGP-NRIYAAMKFFLYTLAGSLLMLLAILGLYFLGgGTFDLLELLNLPLPFGVQTWLFLAFFiafaVKVPLFPLH 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 195 IWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIF-KINLKLNYLFISLCLLGMMILSLVCFFQSDLKILIAYSSVV 273
Cdd:TIGR01972 224 TWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFpDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSIS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 274 HMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFLSFWWFLLCSSNMSFPPS 353
Cdd:TIGR01972 304 HMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGT 383
|
330
....*....|
gi 1011057405 354 LNLFGELFLL 363
Cdd:TIGR01972 384 SGFVGEFLIL 393
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
47-365 |
3.61e-34 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 133.26 E-value: 3.61e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 47 LFGMDMFSYLMFMLGVWIISLVYIPSLNFKNNYLNYFNFLMFTFIIIFYFCFFSNNFILFYIFYEINLIPIIILIYGWGY 126
Cdd:MTH00204 78 VFAVDGVSLFFILLTTLLIPICILISWKSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGS 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 127 QYERFKAGFYLFIYM----IFFSLPFFSCLLSLNNFNFMFMYYFDYLNNLNFYYYLFLMMIFLVKMPLFMFHIWLPKAHV 202
Cdd:MTH00204 158 REEKVRASYYFFFYTfagsVFMLLGIFQLYSITGTTDYQILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHV 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 203 EAPISGSMILAGIMLKLGGFGIYHVLMLIFKI-NLKLNYLFISLCLLGMMILSLVCFFQSDLKILIAYSSVVHMGLVIIG 281
Cdd:MTH00204 238 EAPVAGSVILAGILLKLGGYGFLRFSWPLFPAaSEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLG 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 282 FLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFLSFWWFLLCSSNMSFPPSLNLFGELF 361
Cdd:MTH00204 318 LFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFF 397
|
....
gi 1011057405 362 LLIS 365
Cdd:MTH00204 398 SLLA 401
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
104-379 |
7.44e-34 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 132.10 E-value: 7.44e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 104 ILFYIFYEINLIPIIILIYGWGYQYERFKAGFYLFIYM----IFFSLPFFSCLLSLNNFNFMFMYYFDYLNNLNFYYYLF 179
Cdd:MTH00217 132 VGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTfigsVFMLLGIFTLYSYAGTTDYQALCCLKIEKELQYFIFLG 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 180 LMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKINLKLNYLFI-SLCLLGMMILSLVCF 258
Cdd:MTH00217 212 FFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAIIYGSLTTC 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 259 FQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFLSF 338
Cdd:MTH00217 292 RQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGI 371
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1011057405 339 WWFLLCSSNMSFPPSLNLFGELFlliSLMIWLDYFYILYLL 379
Cdd:MTH00217 372 LMLLLVLANASIPLSCNFVGEFL---SLLAAFEYSYIVGVL 409
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
47-369 |
9.66e-33 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 129.27 E-value: 9.66e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 47 LFGMDMFSYLMFMLGVWIISLVYIPSLNFKNNYLNYFNFLMFTFIIIFYFCFFSNNFILFYIFYEINLIPIIILIYGWGY 126
Cdd:MTH00226 97 VFAVDGISIYFIILTGFIVPCSILISWHSVKYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGS 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 127 QYERFKAGFYLFIYMIFFSLPFFSCLLSLNNF----NFMFMYYFDYLNNLNFYYYLFL--MMIFLVKMPLFMFHIWLPKA 200
Cdd:MTH00226 177 REEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIhgttDYLTLASCSHVVSEQTQKWIFLgiFLAMAVKIPIFPFHIWLPKA 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 201 HVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKINLK-LNYLFISLCLLGMMILSLVCFFQSDLKILIAYSSVVHMGLVI 279
Cdd:MTH00226 257 HVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQnLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVS 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 280 IGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFLSFWWFLLCSSNMSFPPSLNLFGE 359
Cdd:MTH00226 337 ITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGE 416
|
330
....*....|
gi 1011057405 360 LFLLISLMIW 369
Cdd:MTH00226 417 YLSILSSFNW 426
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
48-384 |
7.07e-25 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 106.00 E-value: 7.07e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 48 FGMDMFSYLMFML--GVWIISLVYIPSLNFKNNYLNYFNFLMFTFIIIFYFCFFSNNFILFYIFYEINLIPIIILIYGWG 125
Cdd:COG0651 72 LVADRLSALFLLLtaLVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 126 YQyERFKAGF-YLFIYMIFFSLPFFSCLLSLNNFNFMFMYYF-----DYLNNLNFYYYLFLMMIFLVKMPLFMFHIWLPK 199
Cdd:COG0651 152 TK-EALRAGLkYLILNLVGSALFLLGVGLLYGATGTLNMADLaarlaELDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 200 AHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKINLK--LNYLFISLCLLGMMILSLVCFFQSDLKILIAYSSVVHMGL 277
Cdd:COG0651 231 AYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPAlfLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 278 VIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFLSFWWFLLCSSNMSFPPSLNLF 357
Cdd:COG0651 311 ILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFV 390
|
330 340
....*....|....*....|....*..
gi 1011057405 358 GELFLLISLMIWLDYFYILYLLIMILM 384
Cdd:COG0651 391 SKWLLLQAALEAGAWLLAAVLLLSSLL 417
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
83-323 |
6.34e-23 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 100.88 E-value: 6.34e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 83 FNFLMFTFIIIFYFCFFSNNFILFYIFYEINLIPIIILIYGWGYQYERFKAG---FYLFIYMIFFSLPFFSCLLSLNNFN 159
Cdd:PRK12561 89 FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATkfiLYTALASIFILVAGLALALSGDTFT 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 160 FMF--MYYFDYLNNLNFYYYLFLMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIF-KINL 236
Cdd:PRK12561 169 FDLaeLGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLpDAHV 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 237 KLNYLFISLCLLGMMILSLVCFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYM 316
Cdd:PRK12561 249 YFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYE 328
|
....*..
gi 1011057405 317 RFKSRSM 323
Cdd:PRK12561 329 RTHTLSI 335
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
83-317 |
4.14e-20 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 92.46 E-value: 4.14e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 83 FNFLMFTFIIIFYFCFFSNNFILFYIFYEINLIPIIILIYGWG---YQYERFK-----AGFYLFIYMIFFSLPFFScllS 154
Cdd:PRK02546 117 FYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGgkkRQYAATKfilytAGSSLFILLAALAMAFYG---D 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 155 LNNFNFMFMYYFDYLNNLNFYYYLFLMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIF-K 233
Cdd:PRK02546 194 TPTFDMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLpD 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 234 INLKLNYLFISLCLLGMMILSLVCFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNI 313
Cdd:PRK02546 274 AHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGA 353
|
....
gi 1011057405 314 CYMR 317
Cdd:PRK02546 354 TYDR 357
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
158-317 |
3.59e-17 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 83.46 E-value: 3.59e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 158 FNFMFMYYFDYLNNLNFYYYLFLMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIyhvlmliFKINLK 237
Cdd:CHL00011 195 LNFETLANQSYPVALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGL-------IRINME 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 238 L----NYLFIS-LCLLGMMIL---SLVCFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFC 309
Cdd:CHL00011 268 LlphaHSIFSPwLVIVGAIQIiyaASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFF 347
|
....*...
gi 1011057405 310 LSNICYMR 317
Cdd:CHL00011 348 LAGTSYDR 355
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
179-367 |
9.30e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 82.23 E-value: 9.30e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 179 FLMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKI----NLKLNYLFISLCLLGMMILS 254
Cdd:PRK08375 207 FVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGdfrfALGLGWLLAVLALLSMLVGS 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 255 LVCFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFP 334
Cdd:PRK08375 287 LAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMP 366
|
170 180 190
....*....|....*....|....*....|...
gi 1011057405 335 FLSFWWFLLCSSNMSFPPSLNLFGELFLLISLM 367
Cdd:PRK08375 367 LTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAV 399
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
184-383 |
1.20e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 81.94 E-value: 1.20e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 184 FLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKINLKLNY-------LFISLCLLGMMILSLV 256
Cdd:PRK12667 233 FTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIDfraalspILIILGAVSAIIGALM 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 257 CFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFL 336
Cdd:PRK12667 313 MVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIA 392
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1011057405 337 SFWWFLLCSSNMSFPPSLNLFGELFLLISLMiwlDYFYILYLLIMIL 383
Cdd:PRK12667 393 SFAFLIGALSLVGIPPLNGFFSKLLLFNALL---ESGFYLPALVLLI 436
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
180-331 |
4.52e-16 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 80.13 E-value: 4.52e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 180 LMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGiyhvlMLIFKINLKLN-YLFISLCLLGMMILS---- 254
Cdd:PRK06473 211 ILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYG-----LLRFGVGLFPEaWVYLAPWLATWAVVSvlyg 285
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1011057405 255 -LVCFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLIN 331
Cdd:PRK06473 286 aSCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLN 363
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
179-383 |
4.81e-16 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 79.97 E-value: 4.81e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 179 FLMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKI--NLKLNYLFISLCLLGMMILSLV 256
Cdd:PRK06458 219 FLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAigSDFPGRLLLIFGLLSVLVAAFF 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 257 CFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFL 336
Cdd:PRK06458 299 LLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLT 378
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1011057405 337 SfWWFLLCSSNMSFPPSLNLFGELFLLISLMIWLDYFYILYLLIMIL 383
Cdd:PRK06458 379 G-WGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLL 424
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
41-380 |
2.14e-14 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 74.57 E-value: 2.14e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 41 FLNVSYLFGMDMFSYLMFMLGVWIISLVYIPSLNFKNNYLNYFNFLMFTFIIIFYFCFFSNNFILFYIFYEINLIPIIIL 120
Cdd:MTH00062 31 LVVNNVFNGLFIFDSLSFYLILLVLFLGLYSQVMFYNLLSGVSRFFLFLSLIFSILCFCVNNSLLFWFFYELSIIPLLYL 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 121 IYGWGYQYERFKAGFYLFIYMIFFSLPFFSCLLSLNNFNFMFMY-YFDYLNNLNFYYYLFLMMIFLVKMPLFMFHIWLPK 199
Cdd:MTH00062 111 LFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFsDWGSDDSVSLIVYYVLSFMFITKVPLFPFHTWLPI 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 200 AHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKINLklnYLFISLCLLGMMILSLVCFFQSDLKILIAYSSVVHMGLVI 279
Cdd:MTH00062 191 VHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF---LGYLFLCCLFSVFFLITACSELDGKRWLAFLSLSHILVPV 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 280 IGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFLSFWWFLLCSSNMSFPPSLNLFGE 359
Cdd:MTH00062 268 LGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCE 347
|
330 340
....*....|....*....|.
gi 1011057405 360 LFLLISLMIWLDYFYILYLLI 380
Cdd:MTH00062 348 VFLVSSSFGVLVYLLFWCFYL 368
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
38-308 |
1.43e-13 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 72.72 E-value: 1.43e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 38 FNYFLNVSYLFGMDMFSYLMFMLGVWIISLVYIPSLNFKNNYLNYFNFLMFTFIIIFYFCFFSNNFILFYIFYEINLIPI 117
Cdd:PRK08668 55 TLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSS 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 118 IILIYgWGYQYERFKA---------GFYLFIYMIFFSLPFFScllSLNNFNFMFMYYFDYLNNLNFYYYLFLMMIFLVKM 188
Cdd:PRK08668 135 FMMVP-MGKKESRKASlkyfvlsaiGAYAMLYAIFLIYAKTG---TFDFADISQGLINDTSTGFALIVFLFLLAFGVAKA 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 189 PLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLI-----------FKINLKLNYLFISLCLLGMMILSLVC 257
Cdd:PRK08668 211 GIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLpgtklfsefgtYRGVPLFNYILAWLGNISIIVGTLMA 290
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1011057405 258 FFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLF 308
Cdd:PRK08668 291 ILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
38-331 |
1.45e-13 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 72.44 E-value: 1.45e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 38 FNYFLNVSYLFGMDMFSYLMFMLGVwIISLVYIPSLNFKNNYLNYFNFLMFTFIIIFYFCFFSNNFILFYIFYEINLIPI 117
Cdd:PRK07363 65 WNEPLGLSYSLGVDGLSLPLLVLNS-LLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPF 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 118 IILIYGWGYQyERFKAGFYLFIYMIFFSLPFFSCLLSLNNFNFMFMYYFDYLN--NLNFYYYLFLMMIFLV----KMPLF 191
Cdd:PRK07363 144 YLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAIStqNLSLNTQLILLTGLLLgfgiKIPLV 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 192 MFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKINLKLnyLFISLCLLG---MMILSLVCFFQSDLKILIA 268
Cdd:PRK07363 223 PLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSL--VAPGLAIIGtisVIYGALSAIAQKDIKRMVA 300
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1011057405 269 YSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLIN 331
Cdd:PRK07363 301 YSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMN 363
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
177-383 |
2.43e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 68.63 E-value: 2.43e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 177 YLFLMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFK--INLKLNYLFISLCLLGMMILS 254
Cdd:PRK08676 209 FLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQsgAAEQFSNVLIGLGIFSIAVAA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 255 LVCFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFP 334
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQP 368
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1011057405 335 FLSFWWFLLCSSNMSFPPSLNLFGELFLLISLMIWLDYFYILYLLIMIL 383
Cdd:PRK08676 369 VAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLL 417
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
60-385 |
4.67e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 64.75 E-value: 4.67e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 60 LGVWIISLVYIPSLnFKNNYLNYFNFLMFTFIIIFYFCFFSNNFILFYIFYEINLIPIIILIYGWGYQYERFKAGFYLF- 138
Cdd:PRK08667 91 LCVAIYSLGYNEHM-SSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFv 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 139 ---IYMIFFSLPFFSCLLSLNNFNFMFMYYFDYLNNLNFyyyLFLMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAGI 215
Cdd:PRK08667 170 mtqLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVF---LLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGV 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 216 MLKLGGFGIYHVLMLIFKINLKLNYLFISLCLLGMMILSLVCFFQSDLKILIAYSSVVHMGLVIIGF-----------LT 284
Cdd:PRK08667 247 MLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIglyvifgvyglDT 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 285 LNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFLSFWWFLLCSSNMSFPPSLNLFGELFLLI 364
Cdd:PRK08667 327 LALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYE 406
|
330 340
....*....|....*....|.
gi 1011057405 365 SLmiwLDYFYILYLLIMILMF 385
Cdd:PRK08667 407 SF---FQSFSVADPLIKILLF 424
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
168-367 |
5.18e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 58.21 E-value: 5.18e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 168 YLNNLNFYYYLFLMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKIN-----LKLNYLF 242
Cdd:PRK12662 203 PTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANfvfttLPFNNVF 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 243 ISLCLLGMMILSLVCFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRS 322
Cdd:PRK12662 283 MILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTK 362
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1011057405 323 MFLNKGLINIFPFLSFWWFLLCSSNMSFPPSLNLFGELFLLISLM 367
Cdd:PRK12662 363 LEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFI 407
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
184-317 |
1.07e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 53.80 E-value: 1.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 184 FLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKINLKLNYLFISLCLLGmmilSLVCFFQSDL 263
Cdd:PRK07234 194 LLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLFALLEKDL 269
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1011057405 264 KILIAYSSVVHMGLVIIGFLTlnnlgyfgSLILMFGHGLCSSGLFCLSNICYMR 317
Cdd:PRK07234 270 KRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLCAGALPSR 315
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
177-358 |
2.54e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 52.66 E-value: 2.54e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 177 YLFLMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKINlKLNYLFISLCLLGMMILSLV 256
Cdd:PRK12665 212 FAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGG-GLDTLLMVVALLTMVVGILG 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 257 CFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFL 336
Cdd:PRK12665 291 AIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLL 370
|
170 180
....*....|....*....|..
gi 1011057405 337 SFWWFLlcssnmsfpPSLNLFG 358
Cdd:PRK12665 371 AVLFFV---------PALNLGG 383
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
178-308 |
4.51e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 48.66 E-value: 4.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 178 LFLMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMlKLGGFGI-YHVLMLIFK-INLKLNYLFISLCLLGMMILSL 255
Cdd:PRK05777 208 VFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLLVVAFGgLSEDWQQVLAIIAIASMLVGNL 286
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1011057405 256 VCFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLF 308
Cdd:PRK05777 287 AALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
178-308 |
6.38e-06 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 48.19 E-value: 6.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 178 LFLMMI-FLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMlKLGGFGI-YHVLMLIFK-INLKLNYLFISLCLLGMMILS 254
Cdd:COG1007 206 LVLVLAgLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAlLRLLVEAFPgLAADWQLLLAVLAVLSMTVGN 284
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1011057405 255 LVCFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLF 308
Cdd:COG1007 285 LAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAF 338
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
62-366 |
1.12e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 47.50 E-value: 1.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 62 VWIISLVYIPSLNFKNN--YLNYFNFLMFTFIIIFYFCFFSNNFILFYIFYEINLIPIIILIyGWGYQYERFKAGFYLFI 139
Cdd:PRK06589 95 LWICALLYTPKYLAINNidSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI-GHTRNNISLSGGYKYLK 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 140 YMIFFSLPFFSCLLSL-----NNFNFMFMYYFDYlnnlNFYYYLFLMMIF-LVKMPLFMFHIWLPKAHVEAPISGSMILA 213
Cdd:PRK06589 174 ILMISALLLFLPAVILiytktGNLDFVSGGLFSK----NQSIILLLMFIYgIAKTAIFPVHSWLPAAMVAHYPVSALLHA 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 214 GIMLKLGGFGIYHVLMLIFKIN-----LKLNYLFISLCLLGMMILSLVCFFQSDLKILIAYSSVVHMGLVIIGFLTLNNL 288
Cdd:PRK06589 250 VIVVKTGLFCIYKILLYIFGLSylqriFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPK 329
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1011057405 289 GYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFLSFWWFLLCSSNMSFPPSLNLFGELFLLISL 366
Cdd:PRK06589 330 ALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAA 407
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
184-282 |
1.67e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 47.19 E-value: 1.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 184 FLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLM-LIFKINLKLNYLFISLCLLGMMILSLVCFFQSD 262
Cdd:PRK06521 220 FGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLALGAISAVLGVLYALAEHD 299
|
90 100
....*....|....*....|
gi 1011057405 263 LKILIAYSSVVHMGLVIIGF 282
Cdd:PRK06521 300 LKRLLAYSTIENIGIIFVGL 319
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
184-365 |
2.18e-05 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 46.68 E-value: 2.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 184 FLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKINLKLNYL--FISLCLLGMMILSLVCFFQS 261
Cdd:PRK08377 216 LAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLklVIIMATLTVFFAELSALRQK 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 262 DLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFLSFWWF 341
Cdd:PRK08377 296 NVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALT 375
|
170 180
....*....|....*....|....
gi 1011057405 342 LLCSSNMSFPPSLNLFGELFLLIS 365
Cdd:PRK08377 376 IGALSTVGIPLFNVFWSKFRIILA 399
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
177-384 |
6.80e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 44.97 E-value: 6.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 177 YLFLMMIFLVKMPLFMFHIWLPKAhVEAPISGSMIL-AGIMLKLGGFGIYHVLMLIFKINLKLNYLFISLCLLGMMILSL 255
Cdd:PRK06525 210 FLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFL 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 256 VCFFQSDLKILIAYSSVVHMGLVIIGFLTL---NNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINI 332
Cdd:PRK06525 289 MYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKK 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1011057405 333 FPFLSFWWFLLCSSNMSFPPsLNLFGELFLLISLMIWLDYFYILYLLIMILM 384
Cdd:PRK06525 369 LPLVGVGFCVAALAITGVPP-FNGFFSKFPIFAAGFELSVEYWILLPAMVLL 419
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
178-363 |
1.57e-04 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 43.79 E-value: 1.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 178 LFLMMIFLVKMPLFMFHiWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKINLKLNYLFISL-CLLGMMILSLV 256
Cdd:PRK12663 211 LLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATmAAITMVIGALG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 257 CFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFL 336
Cdd:PRK12663 290 ALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLF 369
|
170 180
....*....|....*....|....*..
gi 1011057405 337 SFWWFLLCSSNMSFPPSLNLFGELFLL 363
Cdd:PRK12663 370 GALFLILIFAIGGLPPFSGFWGKVLLV 396
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
178-362 |
2.06e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 43.40 E-value: 2.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 178 LFLMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKINLKL-NYLFISLCLLGMMILSLV 256
Cdd:PRK07691 213 ILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFtHYLILILALLTIIFGVIG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 257 CFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFL 336
Cdd:PRK07691 293 AVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVL 372
|
170 180
....*....|....*....|....*.
gi 1011057405 337 SFWWFLLCSSNMSFPPSLNLFGELFL 362
Cdd:PRK07691 373 GWMFFIAALSLAGIPPLSGFYGKFFI 398
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
191-358 |
2.16e-04 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 43.88 E-value: 2.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 191 FMFHIWLPKAHVEA-PIS-----GSMILAGIMLKLGGFGIYHVLMLifkinlkLNYLFISLCLLGMMILSLVCFFQSDLK 264
Cdd:PRK12650 225 FPFHFWLPEAMAAItPVSaflhaAAVVKAGIYLLLRFSPVFHDVAV-------WNWLLIIVGMITALMGAVFAVQKTDLK 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 265 ILIAYSSVVHMGLVI--IGFLTLNNLGyfGSLILMFGHGLCSSGLFCLSNICYMRFKSRSMFLNKGLINIFPFlSFWWFL 342
Cdd:PRK12650 298 KLTAYSTVSQLGWIVatIGVGTPFALT--AAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMPF-TFVSVT 374
|
170
....*....|....*..
gi 1011057405 343 LCSSNM-SFPPslnLFG 358
Cdd:PRK12650 375 IAALSMaAVPP---LFG 388
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
194-308 |
6.72e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 42.12 E-value: 6.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 194 HIWLPKAHVEAPISGSMILAGIMLKLGGFGIYHVLMLIFKINLKLNYLFISLCLLGMMILSLVCFFQSDLKILIAYSSVV 273
Cdd:PRK08042 200 HGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLE 279
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1011057405 274 HMGLVIIGF------LTLNN-----LGYFGSLILMFGHGLCSSGLF 308
Cdd:PRK08042 280 NIGIILLGLgagvtgIALEQpaliaLGLVGGLYHLLNHSLFKSVLF 325
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
178-367 |
1.70e-03 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 40.70 E-value: 1.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 178 LFLMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAgIMLKLGGFGIYHVLML--IFKINLKLNYLFISLCLLGMMILSL 255
Cdd:TIGR01770 207 VLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFS-IVPKIAIFAVFLRLFLyiLFGFSEAWQIFLAIIAFLSMLIGNF 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 256 VCFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSSGLFC--LSNICYMRFKSRSMFLNKGLINIF 333
Cdd:TIGR01770 286 GALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFGvlSLLRSYKDEWIEYISDFAGLFKTN 365
|
170 180 190
....*....|....*....|....*....|....
gi 1011057405 334 PFLSFWWFLLCSSNMSFPPSLNLFGELFLLISLM 367
Cdd:TIGR01770 366 PILAILILIFMFSLAGIPPLAGFFGKFYVFFALL 399
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
149-373 |
2.78e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 39.63 E-value: 2.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 149 FSCLLSLNNFNFMFMYYFDYLNNLNFYYYLFLMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAgIMLKLGGFGIyhvl 228
Cdd:MTH00196 70 TTGGLHLSYINLVLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLGIFSI---- 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 229 mlIFKINLKLNYLFIsLCLLGMMILSLVCFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMFGHGLCSsgLF 308
Cdd:MTH00196 145 --LVSIGLNVNILLI-GGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMS--IC 219
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1011057405 309 CLSNICYMRFKSRSMFLNKGLINIFPFLSFWWFLLCSSNMSFPPSLNLFGELFLLISLMIWLDYF 373
Cdd:MTH00196 220 VFSIILALNVYKNLIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYL 284
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-282 |
3.07e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 39.70 E-value: 3.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 106 FYIFYEINLIPIIILIYGWGYQYERFKAGF-YLFIYMIFFSLPFFSCLLSLNNFNFMFMYYFDY-----LNNLNFYYYLF 179
Cdd:PRK08376 146 FFVFLEIMSIASYALVAFRNDTWEAIEAGIkYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVkmsenPTVVAKIALAL 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 180 LMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILagIMLKLGGF-GIYHVLMLIF--KINLK-LNYLFISLCLLGMMILSL 255
Cdd:PRK08376 226 FIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGLyALARVLFSIYgpAINLAtVGWVIIILGCLTMFVGVA 303
|
170 180
....*....|....*....|....*..
gi 1011057405 256 VCFFQSDLKILIAYSSVVHMGLVIIGF 282
Cdd:PRK08376 304 MAVVQKDVKRLLAYHSVSQIGYMLLGL 330
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
178-308 |
5.64e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.00 E-value: 5.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 178 LFLMMIFLVKMPLFMFHI--WLPKAHVEAPISGSMILAGIMLKLGGFGIyhVLMLIFKINLKLNYLFISLCLLG---MMI 252
Cdd:PRK06459 162 ILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGI--LKMTILTQTIPIGYFGLTILAIGafsILF 239
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1011057405 253 LSLVCFFQSDLKILIAYSSV-------VHMGLVIIGFLTLNNLGYF---GSLILMFGHGLCSSGLF 308
Cdd:PRK06459 240 GALYAYVSENVKGLLAFSTIenngailVALGLYMVTKQLITSIEHFsliTVILYSFAHSVAKTGLF 305
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
160-436 |
9.30e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 37.88 E-value: 9.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 160 FMFMYYFDYLNNLNFYYYLFLMMIFLVKMPLFMFHIWLPKAHVEAPISGSMILAGIMlklggfgiyHVLMLIFKINLKLN 239
Cdd:MTH00160 73 FSIILNMLNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQ---------KIAPLILLSYLINN 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 240 YLFISLCLLGMMILSLVCFFQSDLKILIAYSSVVHMGLVIIGFLTLNNLGYFGSLILMfghglcssglFCLSNICYMRFK 319
Cdd:MTH00160 144 NFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYS----------IISLSIILLFNK 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011057405 320 SRSMFLN--KGLINIFPFLSFWWFLLCSSNMSFPPSLNLFGELFLLISLMIWLDYFYILYLLIMILMFLYSLYLYLYTQY 397
Cdd:MTH00160 214 FNIFFLNqlFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSL 293
|
250 260 270
....*....|....*....|....*....|....*....
gi 1011057405 398 GKLFFNMNYLVYINLSEYLLLFMHWLPLNIIFLILELFF 436
Cdd:MTH00160 294 MLNYNKNKWNLKKKKNKFSLILNFLSFISLFGLILSSLL 332
|
|
| |
