NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1134945828|ref|YP_009344783|]
View 

ATP synthase F0 subunit 8 (mitochondrion) [Cichlasoma dimerus]

Protein Classification

ATP synthase F0 subunit 8( domain architecture ID 10009578)

ATP synthase F0 subunit 8 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-55 2.58e-31

ATP synthase F0 subunit 8; Provisional


:

Pssm-ID: 177191  Cd Length: 55  Bit Score: 102.26  E-value: 2.58e-31
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 1134945828  1 MPQLNPTPWFAILIFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKSKTEPWNWPWH 55
Cdd:MTH00133   1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWPWH 55
 
Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-55 2.58e-31

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177191  Cd Length: 55  Bit Score: 102.26  E-value: 2.58e-31
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 1134945828  1 MPQLNPTPWFAILIFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKSKTEPWNWPWH 55
Cdd:MTH00133   1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWPWH 55
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-54 2.27e-09

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 46.95  E-value: 2.27e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 1134945828  1 MPQLNPTPWFAILIFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKSKTEPWNWPW 54
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTNPPPKSLKTTKHPNPWEWKW 54
 
Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-55 2.58e-31

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177191  Cd Length: 55  Bit Score: 102.26  E-value: 2.58e-31
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 1134945828  1 MPQLNPTPWFAILIFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKSKTEPWNWPWH 55
Cdd:MTH00133   1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWPWH 55
ATP8 MTH00072
ATP synthase F0 subunit 8; Provisional
 1-55 3.64e-18

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 164642  Cd Length: 54  Bit Score: 69.23  E-value: 3.64e-18
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 1134945828  1 MPQLNPTPWFAILIFSWLVFLTIIPPKVLAHTFPNEPTPQsTEKSKTEPWNWPWH 55
Cdd:MTH00072   1 MPQLNPGPWFAIFLMSWLIFLLILPFKISNHKNLNEPTSQ-NKKNKPESWNWPWT 54
ATP8 MTH00171
ATP synthase F0 subunit 8; Provisional
 1-54 4.98e-17

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177225  Cd Length: 54  Bit Score: 66.23  E-value: 4.98e-17
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 1134945828  1 MPQLNPTPWFAILIFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKSKTEPWNWPW 54
Cdd:MTH00171   1 MPQLNPIPWFFIFLFSWLIFLTLLPNKITKHIFTNKPSPNQTEKPKPNEWNWPW 54
ATP8 MTH00123
ATP synthase F0 subunit 8; Provisional
 1-55 6.53e-10

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 214426  Cd Length: 54  Bit Score: 48.34  E-value: 6.53e-10
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 1134945828  1 MPQLNPTPWFAILIFSWLVFLTIIPPKVLAHTFPNEPTPQSTeKSKTEPWNWPWH 55
Cdd:MTH00123   1 MPQLNPAPWFLIMLLTWLTLILIIQPKILSFTPTNNPTKTNT-TTNTTPWTWPWT 54
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-54 2.27e-09

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 46.95  E-value: 2.27e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 1134945828  1 MPQLNPTPWFAILIFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKSKTEPWNWPW 54
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTNPPPKSLKTTKHPNPWEWKW 54
ATP8 MTH00102
ATP synthase F0 subunit 8; Validated
 1-54 7.98e-03

ATP synthase F0 subunit 8; Validated


Pssm-ID: 214420  Cd Length: 67  Bit Score: 30.58  E-value: 7.98e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 1134945828  1 MPQLNPTPWFAILIFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKSKTE-PWNWPW 54
Cdd:MTH00102   1 MPQLDTSTWFITILSMLLTLFIIFQLKISKHNYPLNPEPKSLKTKKQNtPWEKKW 55
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH