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Conserved domains on  [gi|1747255340|ref|YP_009693810|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Polyplectron malacense]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009570)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 4-324 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 214422  Cd Length: 323  Bit Score: 586.09  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340   4 PTLMNLLVMALSYVLPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPI 83
Cdd:MTH00111    2 PTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  84 LALLLALTIWVPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIML 163
Cdd:MTH00111   82 LALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILL 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 164 SGNYTLNTLAITQEPIYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNT 243
Cdd:MTH00111  162 SGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNT 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 244 LTTILFLNPSFLNTPTELFPITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISYAGMPP 323
Cdd:MTH00111  242 LTTILFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPP 321


                  .
gi 1747255340 324 I 324
Cdd:MTH00111  322 Q 322
 
Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 4-324 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 586.09  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340   4 PTLMNLLVMALSYVLPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPI 83
Cdd:MTH00111    2 PTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  84 LALLLALTIWVPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIML 163
Cdd:MTH00111   82 LALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILL 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 164 SGNYTLNTLAITQEPIYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNT 243
Cdd:MTH00111  162 SGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNT 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 244 LTTILFLNPSFLNTPTELFPITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISYAGMPP 323
Cdd:MTH00111  242 LTTILFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPP 321


                  .
gi 1747255340 324 I 324
Cdd:MTH00111  322 Q 322
NADHdh pfam00146
NADH dehydrogenase;
12-310 4.00e-110

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 322.11  E-value: 4.00e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  12 MALSYVLPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPILALLLALT 91
Cdd:pfam00146   1 KILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  92 IWVPLPL--PFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIMLSGNYTL 169
Cdd:pfam00146  81 AFAVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 170 NTLAITQEPIYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTLTTILF 249
Cdd:pfam00146 161 SEIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1747255340 250 L---NPSFLNTPTelfpITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLW 310
Cdd:pfam00146 241 LggwLGPFPLPGL----LWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 5-306 1.60e-102

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 303.59  E-value: 1.60e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340   5 TLMNLLVMALSYVLPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPIL 84
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  85 ALLLALTIWVPLPL--PFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIM 162
Cdd:COG1005    87 AFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 163 LSGnyTLNTLAIT---QEPIYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIM 239
Cdd:COG1005   167 LAG--SLNLSEIVeaqAGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMF 244

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1747255340 240 LMNTLTTILFL---NPSFLNTPTELFP--ITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLA 306
Cdd:COG1005   245 LVSALATTLFLggwLGPFPILPLGGLPgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
 
Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 4-324 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 586.09  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340   4 PTLMNLLVMALSYVLPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPI 83
Cdd:MTH00111    2 PTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  84 LALLLALTIWVPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIML 163
Cdd:MTH00111   82 LALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILL 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 164 SGNYTLNTLAITQEPIYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNT 243
Cdd:MTH00111  162 SGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNT 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 244 LTTILFLNPSFLNTPTELFPITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISYAGMPP 323
Cdd:MTH00111  242 LTTILFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPP 321


                  .
gi 1747255340 324 I 324
Cdd:MTH00111  322 Q 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 5-323 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 505.68  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340   5 TLMNLLVMALSYVLPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPIL 84
Cdd:MTH00134    4 TLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPML 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  85 ALLLALTIWVPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIMLS 164
Cdd:MTH00134   84 ALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFT 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 165 GNYTLNTLAITQEPIYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTL 244
Cdd:MTH00134  164 GGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTL 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1747255340 245 TTILFLNPSFLNTPTELFPITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISYAGMPP 323
Cdd:MTH00134  244 SAILFLGASHIPTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPP 322
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 5-323 1.39e-179

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 499.15  E-value: 1.39e-179
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340   5 TLMNLLVMALSYVLPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPIL 84
Cdd:MTH00071    3 TLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTM 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  85 ALLLALTIWVPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIMLS 164
Cdd:MTH00071   83 ALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLT 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 165 GNYTLNTLAITQEPIYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTL 244
Cdd:MTH00071  163 GGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTL 242

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1747255340 245 TTILFLNPSFLNTPTELFPITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISYAGMPP 323
Cdd:MTH00071  243 STILFLGSTYNHLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPP 321
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 14-323 8.15e-178

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 494.53  E-value: 8.15e-178
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  14 LSYVLPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPILALLLALTIW 93
Cdd:MTH00104    7 LLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMW 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  94 VPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIMLSGNYTLNTLA 173
Cdd:MTH00104   87 IPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLI 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 174 ITQEPIYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTLTTILFLNPS 253
Cdd:MTH00104  167 TTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGAF 246

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 254 FLNTPTELFPITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISYAGMPP 323
Cdd:MTH00104  247 HNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPP 316
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 6-323 1.09e-145

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 412.77  E-value: 1.09e-145
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340   6 LMNLLVMALSYVLPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPILA 85
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  86 LLLALTIWVPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIMLSG 165
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 166 NYTLNTLAITQEPIYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTLT 245
Cdd:MTH00218  161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1747255340 246 TILFLNPSFLntptelfPITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISYAGMPP 323
Cdd:MTH00218  241 VILFLGTSLT-------TINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 9-323 4.04e-138

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 393.96  E-value: 4.04e-138
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340   9 LLVMALSYVLPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPILALLL 88
Cdd:MTH00040    6 FLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFL 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  89 ALTIWVPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIMLSGNYT 168
Cdd:MTH00040   86 ALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFS 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 169 LNTLAITQEPIYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTLTTIL 248
Cdd:MTH00040  166 LSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVIL 245

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1747255340 249 FLN-PSFLNTPTELFPITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISYAGMPP 323
Cdd:MTH00040  246 FLGgGSPFNEIFPINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 7-307 2.01e-112

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 327.98  E-value: 2.01e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340   7 MNLLVMALSYVLPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPILAL 86
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  87 LLALTIWVPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIMLSGN 166
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 167 YTLNTLAITQEPIYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTLTT 246
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1747255340 247 ILFLnpSFLNTPTELFPITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLAL 307
Cdd:MTH00143  241 VLFF--GGSSVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSI 299
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 6-320 1.75e-111

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 325.93  E-value: 1.75e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340   6 LMNLLVMALSYVLPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPILA 85
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  86 LLLALTIWVPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIMLSG 165
Cdd:MTH00195   81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 166 NYTLNTLAITQEPIYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTLT 245
Cdd:MTH00195  161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1747255340 246 TILFLNPSFLntptelfpITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISYAG 320
Cdd:MTH00195  241 TILFLGGGGT--------IIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-316 1.15e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 323.64  E-value: 1.15e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340   6 LMNLLVMALSYVLPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPILA 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  86 LLLALTIWVPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIMLSG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 166 NYTLNTLAITQEPIYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTLT 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1747255340 246 TILFLNPSFLNtptelfpITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPI 316
Cdd:MTH00193  241 VLMFLGGDLLS-------LLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKI 304
NADHdh pfam00146
NADH dehydrogenase;
12-310 4.00e-110

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 322.11  E-value: 4.00e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  12 MALSYVLPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPILALLLALT 91
Cdd:pfam00146   1 KILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  92 IWVPLPL--PFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIMLSGNYTL 169
Cdd:pfam00146  81 AFAVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 170 NTLAITQEPIYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTLTTILF 249
Cdd:pfam00146 161 SEIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1747255340 250 L---NPSFLNTPTelfpITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLW 310
Cdd:pfam00146 241 LggwLGPFPLPGL----LWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 9-324 6.11e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 309.74  E-value: 6.11e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340   9 LLVMALSYVLPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPILALLL 88
Cdd:MTH00054    4 IIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  89 ALTIW--VPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIMLSGN 166
Cdd:MTH00054   84 AFIAWgvIPYGEGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGS 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 167 YTLNTLAITQEPIYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTLTT 246
Cdd:MTH00054  164 LNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGV 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 247 ILFLNPSF-LNTPTELFP--ITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISYAGMPP 323
Cdd:MTH00054  244 ILFLGGWLvISGPTSYFSnfVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPP 323


                  .
gi 1747255340 324 I 324
Cdd:MTH00054  324 F 324
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 5-324 1.95e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 308.59  E-value: 1.95e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340   5 TLMNLLVMALSYVLPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPIL 84
Cdd:MTH00216    4 FIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  85 ALLLALTIW--VPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIM 162
Cdd:MTH00216   84 SFTLALIVWgvIPYERGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLL 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 163 LSGNYTLNTLAITQEP-IYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLM 241
Cdd:MTH00216  164 CVGSLSITEIVLAQNNgIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILM 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 242 NTLTTILFLNpSFLNTPTELF--PITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISYA 319
Cdd:MTH00216  244 SCLTTILFLG-GWLSPIKYFKggAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFN 322


                  ....*
gi 1747255340 320 GMPPI 324
Cdd:MTH00216  323 GPPPI 327
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 6-313 6.45e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 306.58  E-value: 6.45e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340   6 LMNLLVMALSYVLpILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPILA 85
Cdd:MTH00225    1 MSFLLKFLIMLIC-LLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILS 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  86 LLLALTIWVPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIMLSG 165
Cdd:MTH00225   80 LILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVL 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 166 NYTLNTLAITQEPIYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTLT 245
Cdd:MTH00225  160 TYNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLT 239

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1747255340 246 TILFLNPSFLntpteLFPITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTS 313
Cdd:MTH00225  240 SILFFGGFFV-----TIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLI 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 5-306 1.60e-102

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 303.59  E-value: 1.60e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340   5 TLMNLLVMALSYVLPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPIL 84
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  85 ALLLALTIWVPLPL--PFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIM 162
Cdd:COG1005    87 AFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 163 LSGnyTLNTLAIT---QEPIYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIM 239
Cdd:COG1005   167 LAG--SLNLSEIVeaqAGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMF 244

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1747255340 240 LMNTLTTILFL---NPSFLNTPTELFP--ITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLA 306
Cdd:COG1005   245 LVSALATTLFLggwLGPFPILPLGGLPgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-310 4.80e-96

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 287.09  E-value: 4.80e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340   1 MTSPTLMNLLVMALSYVLPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIM 80
Cdd:PRK06076    4 FGPDLLLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  81 TPILALLLALTIWVPLPL--PFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILL 158
Cdd:PRK06076   84 APVIAFIPAFLAWAVIPFgpELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLL 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 159 STIMLSGnyTLNTLAI--TQEPIYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYA 236
Cdd:PRK06076  164 AVVLLAG--SLNLSDIveAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYI 241

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1747255340 237 NIMLMNTLTTILFL---NPSFLNTPTELFPITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLW 310
Cdd:PRK06076  242 NMILVSALITTLFLggwLPPFPLGGGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 1-323 5.94e-87

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 264.57  E-value: 5.94e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340   1 MTSPTLMNLLVMALSYVLPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIM 80
Cdd:MTH00029    1 MTIYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  81 TPILALLLALTIW--VPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILL 158
Cdd:MTH00029   81 APIISFTLAILAWaiVTMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIII 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 159 STIMLSGNYTLNTLAITQEPIYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANI 238
Cdd:MTH00029  161 SVILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNI 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 239 MLMNTLTTILFLN------------PSFLNTPTELFPITLA----TKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLP 302
Cdd:MTH00029  241 ILMSCMMTIFFLGgwlspldgiptpPEAFSIFEQIASSKSSfwffTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLP 320

                         330       340
                  ....*....|....*....|.
gi 1747255340 303 LTLALCLWHTSMPISYAGMPP 323
Cdd:MTH00029  321 LSLGLVILTAGILIGFNGVPP 341
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 12-309 2.46e-81

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 249.31  E-value: 2.46e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  12 MALSYVLPILiAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPILALLLALT 91
Cdd:MTH00010    9 ILLSYVMALL-AMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALL 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  92 IWVPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIMLSGNYTLNT 171
Cdd:MTH00010   88 LWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSK 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 172 LAITQ-EPIYLIFPawPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTLTTILFL 250
Cdd:MTH00010  168 IIMSQySWILLMII--PLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFT 245

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1747255340 251 NPSflnTPTELFPITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCL 309
Cdd:MTH00010  246 SFI---PSIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLM 301
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 7-305 2.03e-62

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 199.74  E-value: 2.03e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340   7 MNLLVMALsyvlpILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPILAL 86
Cdd:MTH00090    1 MLLLMMIF-----ILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSF 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  87 LLALTIWVPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIMLSGN 166
Cdd:MTH00090   76 VVMYLEWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNS 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 167 YTL-NTLAITQEPIYLIFpawplammwFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTLT 245
Cdd:MTH00090  156 FSFvSSFSLSLFVIYLPF---------LIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLT 226

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 246 TILFLNPSFLNtptelfpitlatkVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTL 305
Cdd:MTH00090  227 SVLFFKFSFLM-------------LFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSL 273
ndhA CHL00032
NADH dehydrogenase subunit 1
 9-313 1.49e-50

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 171.29  E-value: 1.49e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340   9 LLVMALSYVLPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPILALLL 88
Cdd:CHL00032   29 ILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVIS 108

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  89 ALTIW--VPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIMLSGn 166
Cdd:CHL00032  109 ILLSYlvIPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSN- 187

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 167 yTLNTLAITQEPIYLIFPAWPL------AMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIML 240
Cdd:CHL00032  188 -SLSTVDIVEAQSKYGFWGWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLV 266

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 241 MNTLTTILFLNPSFLNTP----TELFPITLATKVL--------LLSSTFLWI------RASYPRFRYDQLMHLLWKNFLP 302
Cdd:CHL00032  267 SSLFVTVLYLGGWNLSIPyifiPELFEINKTGGVFgttigifiTLAKTYLFLfisittRWTLPRLRMDQLLNLGWKFLLP 346

                         330
                  ....*....|.
gi 1747255340 303 LTLALCLWHTS 313
Cdd:CHL00032  347 ISLGNLLLTTS 357
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 10-305 4.60e-45

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 155.08  E-value: 4.60e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  10 LVMALSYVLPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPILALLLA 89
Cdd:MTH00058    4 LVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLV 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  90 LTIWVPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIMLSGNYTL 169
Cdd:MTH00058   84 VFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSL 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 170 NTlaITQEPIYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTLTTILF 249
Cdd:MTH00058  164 VD--FYYSGWLSVLLFPLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLF 241

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1747255340 250 LNPSFLNtptelfpITLATKVLLlsstFLWIRASYPRFRYDQLMHLLWKNFLPLTL 305
Cdd:MTH00058  242 FGGGFVS-------IMLLFHLLF----FMWARATLPRVRYDYFVNFFWEYCLVLLI 286
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
7-310 8.74e-30

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 114.90  E-value: 8.74e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340   7 MNLLVMALSYVLPILIAVAFLTLVERKILSYMQARKGPnivgpfGLLQPIADGVKLFIKEPIRPSTSSpFLFIMTPILAL 86
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340  87 LLALTI-----WVPLPLPFPLADLNLGLLFLLAMSSLTvysLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTI 161
Cdd:COG0650    74 AAMLLAallvpVLTTGPPLSFSGDLIVLVYLLALARFF---LALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALA 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1747255340 162 MLSGN---YTLNTLAITQEPIYLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANI 238
Cdd:COG0650   151 LLAGStslSDIVAYQAAHGPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKL 230

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1747255340 239 MLMNTLTTILFLnPSFLNTPTELFPITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLW 310
Cdd:COG0650   231 FVLLSLFVNLFL-PWGIALTLLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLA 301
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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