|
Name |
Accession |
Description |
Interval |
E-value |
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-484 |
3.23e-156 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 452.61 E-value: 3.23e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 1 MITSLILIPIIGSLLILLYPESTDQgknkhtlSIKQIALITSLINFFISLFIWYQFDSNTTQYQFVSEFN---QLNFcHL 77
Cdd:COG1008 5 LLSLLILLPLLGALLLLLLPRRNAR-------LARWVALAVSLLTLLLSLYLLAGFDPGTGGFQFVESYPwipSLGI-SY 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 78 NFGVDGISLYFVLLTTFVTPIALLSNYANINKNLKIFLVSFLLLESLQICAFVSLDLLLFYVFFESVLPILFIVIIIFGH 157
Cdd:COG1008 77 HLGVDGISLPLVLLTALLTPLAILASWNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 158 GNdRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLYEISLDS--QKLLWLGFFLAFAVKTPLYPFIIWLPKA 235
Cdd:COG1008 157 ER-RIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLtaQLLLFLAFFIAFAVKVPMFPFHTWLPDA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 236 HADSPLAGSIILAATILKLATYGYLRVLINFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVV 315
Cdd:COG1008 236 HVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 316 LGLFSNTIQGIEGAILLALAHGFVSPALFICVgGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFLG 395
Cdd:COG1008 316 LGIFALNPLGLQGAVLQMVSHGLITAALFLLV-GVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 396 EQLSLIGIWIQNPIIAALGATGIVLSACYSLFLFNRLSYGKLSPLLTPVKDLNRREYYLLISLIIPTIAFGILPDVLLDS 475
Cdd:COG1008 395 EFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQPLLDL 474
|
....*....
gi 1778127934 476 LHTSVSALL 484
Cdd:COG1008 475 IEPSVEALL 483
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
1-484 |
9.35e-147 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 428.85 E-value: 9.35e-147
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 1 MITSLILIPIIGSLLILLYPESTDQgknkhtlSIKQIALITSLINFFISLFIWYQFDSNTTQYQFVSEFNQLNFCHLNF- 79
Cdd:PRK05846 5 LLSLLIFLPLIGGLLVLLTERFGAR-------LARWIALIGTLLTLLLSLVLWIGFDSSNAGFQFVEKHPWIPRFGISYh 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 80 -GVDGISLYFVLLTTFVTPIALLSNYANINKNLKIFLVSFLLLESLQICAFVSLDLLLFYVFFESVLPILFIVIIIFGhG 158
Cdd:PRK05846 78 lGVDGISLLLVVLTALLTPLAVLASWEEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG-G 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 159 NDRFRSAFLLFLYTLAGSLPMLLCILVIYSY----IGSTDFQLISLYEISLDSQKLLWLGFFLAFAVKTPLYPFIIWLPK 234
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPD 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 235 AHADSPLAGSIILAATILKLATYGYLRVLINFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVV 314
Cdd:PRK05846 237 AHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFV 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 315 VLGLFSNTIQGIEGAILLALAHGFVSPALFICVgGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFL 394
Cdd:PRK05846 317 TLGIFAGNQLGIQGAIFQMISHGLSSAALFLLV-GVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFV 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 395 GEQLSLIGIWIQNPIIAALGATGIVLSACYSLFLFNRLSYGKLSPLLTPVKDLNRREYYLLISLIIPTIAFGILPDVLLD 474
Cdd:PRK05846 396 GEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVALLLLLGVYPKPLLD 475
|
490
....*....|
gi 1778127934 475 SLHTSVSALL 484
Cdd:PRK05846 476 VIHPSVENLL 485
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
1-480 |
7.30e-129 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 382.86 E-value: 7.30e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 1 MITSLILIPIIGSLLILLYPEstdqgknKHTLSIKQIALITSLINFFISLFIWYQFDSNTtQYQFVSEFNQL-----NFC 75
Cdd:MTH00217 1 MLELVFILPLIGILHLLIIPR-------DNIVRLKKIALEWSLLTLTATILLWASFDGEG-QFQAIKKFEWIpgiepVFG 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 76 HLNFGVDGISLYFVLLTTFVTPIALLSNYANINKNLKIFLVSFLLLESLQICAFVSLDLLLFYVFFESVLPILFIVIIIF 155
Cdd:MTH00217 73 PVVFAVDGISIFFLILTALLTPICILISWNSIKFLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIW 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 156 GHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLYEISLDSQKLLWLGFFLAFAVKTPLYPFIIWLPKA 235
Cdd:MTH00217 153 GSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQA 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 236 HADSPLAGSIILAATILKLATYGYLRVLINFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVV 315
Cdd:MTH00217 233 HVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVT 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 316 LGLFSNTIQGIEGAILLALAHGFVSPALFICVgGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFLG 395
Cdd:MTH00217 313 LGIFSHTIQGLVAAIFLMLAHGLVSSALFIAV-TFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVG 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 396 EQLSLIGIWIQNPIIAALGATGIVLSACYSLFLFNRLSYGKLSPLLTPVKDLNRREYYLLISLIIPTIAFGILPDVLLDS 475
Cdd:MTH00217 392 EFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGAPSKYLYFSRDLNRREFYVLLPLVFLIYLMGIFPFIIIDV 471
|
....*
gi 1778127934 476 LHTSV 480
Cdd:MTH00217 472 IKSSV 476
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
5-484 |
2.82e-127 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 378.51 E-value: 2.82e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 5 LILIPIIGSLLILLYPESTDQgknkhtlSIKQIALITSLINFFISLFIWYQFDSNTTQYQFVSEFNQLNFCHLNF--GVD 82
Cdd:TIGR01972 4 LIFLPLIGALLILLLPSNKDG-------KARWIALVVALATLLLSLLLLFQFDPTGSGFQFTEDIPWIPALGISYhlGVD 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 83 GISLYFVLLTTFVTPIALLSNYANINKNLKIFLVSFLLLESLQICAFVSLDLLLFYVFFESVLPILFIVIIIFGhGNDRF 162
Cdd:TIGR01972 77 GISLLLVLLTALLTLLAILASWESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWG-GPNRI 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 163 RSAFLLFLYTLAGSLPMLLCILVIYSYIGSTdFQLISLYEISLDS--QKLLWLGFFLAFAVKTPLYPFIIWLPKAHADSP 240
Cdd:TIGR01972 156 YAAMKFFLYTLAGSLLMLLAILGLYFLGGGT-FDLLELLNLPLPFgvQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAP 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 241 LAGSIILAATILKLATYGYLRVLINFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVLGLFS 320
Cdd:TIGR01972 235 TAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFS 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 321 NTIQGIEGAILLALAHGFVSPALFICVgGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFLGEQLSL 400
Cdd:TIGR01972 315 FNELGISGAVFQMISHGLITAALFLLV-GVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLIL 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 401 IGIWIQNPIIAALGATGIVLSACYSLFLFNRLSYGKLS-PLLTPVKDLNRREYYLLISLIIPTIAFGILPDVLLDSLHTS 479
Cdd:TIGR01972 394 LGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSnPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLLDLTEPS 473
|
....*
gi 1778127934 480 VSALL 484
Cdd:TIGR01972 474 VNNLL 478
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
1-480 |
1.04e-121 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 364.77 E-value: 1.04e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 1 MITSLILIPIIGSLLILLYPESTDqgknkhtLSIKQIALITSLINFFISLFIWYQFDSNTtQYQFVSEFNQLNFCHLN-- 78
Cdd:MTH00204 2 GLSLIFLILFMGIINVMGVPRENS-------VKLKKRALEWSLAILFSTLVLWGAFDGEG-QFQFINLIEWIISPTLNfq 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 79 -----FGVDGISLYFVLLTTFVTPIALLSNYANINKNLKIFLVSFLLLESLQICAFVSLDLLLFYVFFESVLPILFIVII 153
Cdd:MTH00204 74 wgplvFAVDGVSLFFILLTTLLIPICILISWKSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIG 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 154 IFGHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLYEISLDSQKLLWLGFFLAFAVKTPLYPFIIWLP 233
Cdd:MTH00204 154 IWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLP 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 234 KAHADSPLAGSIILAATILKLATYGYLRVLINFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGV 313
Cdd:MTH00204 234 QAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGL 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 314 VVLGLFSNTIQGIEGAILLALAHGFVSPALFICVgGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNF 393
Cdd:MTH00204 314 VPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAV-TFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNF 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 394 LGEQLSLIGIWIQNPIIAALGATGIVLSACYSLFLFNRLSYGKLSPLLTPVKDLNRREYYLLISLIIPTIAFGILPDVLL 473
Cdd:MTH00204 393 VGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELLAILPLIIAIFLLGIVPFIII 472
|
....*..
gi 1778127934 474 DSLHTSV 480
Cdd:MTH00204 473 DLVKNSL 479
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
77-480 |
2.90e-91 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 286.82 E-value: 2.90e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 77 LNFGVDGISLYFVLLTTFVTPIALLSNYANINKNLKIFLVSFLLLESLQICAFVSLDLLLFYVFFESVLPILFIVIIIFG 156
Cdd:MTH00226 96 LVFAVDGISIYFIILTGFIVPCSILISWHSVKYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWG 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 157 HGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLI--SLYEISLDSQKLLWLGFFLAFAVKTPLYPFIIWLPK 234
Cdd:MTH00226 176 SREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLasCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPK 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 235 AHADSPLAGSIILAATILKLATYGYLRVLINFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVV 314
Cdd:MTH00226 256 AHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLV 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 315 VLGLFSNTIQGIEGAILLALAHGFVSPALFICVgGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFL 394
Cdd:MTH00226 336 SITLVTHDIIGLTGSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFI 414
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 395 GEQLSLIGIWIQNPIIAALGATGIVLSACYSLFLFNRLSYGKLSPLLTPVKDLNRREYYLLISLIIPTIAFGILPDVLLD 474
Cdd:MTH00226 415 GEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRREFYITASMVFFAFLIGIYPIFILE 494
|
....*.
gi 1778127934 475 SLHTSV 480
Cdd:MTH00226 495 VIQNSL 500
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
79-472 |
2.09e-77 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 248.22 E-value: 2.09e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 79 FGVDGISLYFVLLTTFVTPIALLSNYANINKNLKIFLVSFLLLESLQIC--AFVSLDLLLFYVFFESVLPILFIVIIIFG 156
Cdd:MTH00150 20 FSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILvlAFSVSSLLMFYFFFEASLIPTLLLILGWG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 157 HGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLYEISLDSQKLLWLGFFLAFAVKTPLYPFIIWLPKAH 236
Cdd:MTH00150 100 YQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWLPKAH 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 237 ADSPLAGSIILAATILKLATYGYLRVLINFlpdatNYFNPLIQTIAVIAIIYAS-LSTII---QQDTKRLIAYSSIAHMG 312
Cdd:MTH00150 180 VEAPVAGSMILAGILLKLGGYGILRMMMVF-----SLSSSSFSIFLISLSLWGGvLTSLIclrQSDVKSLIAYSSVGHMS 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 313 VVVLGLFSNTIQGIEGAILLALAHGFVSPALFiCVGGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLN 392
Cdd:MTH00150 255 LVLAGVLSNTSWGWVGALIMMVSHGFCSSGLF-CLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLN 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 393 FLGEQLSLIGIWIQNPIIAALGATGIVLSACYSLFLFNRLSYGKLSPLLTPVKDLNRREYYLLISLIIPTIAFGILPDVL 472
Cdd:MTH00150 334 LLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLL 413
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
46-461 |
8.49e-74 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 239.67 E-value: 8.49e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 46 FFISLFIWYQFDSNTTQYQFVSEFnqlnfchlnFGVDGISLYFVLLTTFVTPIALLS--NYANINKNLKIFLVSFLLLES 123
Cdd:MTH00163 28 LFLLSFLFMLLFSLSFYFSNISYF---------FGLDLLSFGLILLSFWICMLMILSseSVYKKNNYSNLFLFLILFLLI 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 124 LQICAFVSLDLLLFYVFFESVLPILFIVIIIFGHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLYEI 203
Cdd:MTH00163 99 FLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFLLNFFGS 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 204 sldSQKLLWLGFFLAFAVKTPLYPFIIWLPKAHADSPLAGSIILAATILKLATYGYLRVLiNFLPDATNYFNPLIQTIAV 283
Cdd:MTH00163 179 ---LNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVM-SFFSKLGLKFNYIWISISL 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 284 IAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFiCVGGIIYDRTGTRVINYI 363
Cdd:MTH00163 255 VGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLF-CLANIIYERLGSRSLLIN 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 364 RGLVTYMPVFTILFFVFTLANTGIPLSLNFLGEQLSLIGI----WIQNPIIAALgatgIVLSACYSLFLFNRLSYGKLSP 439
Cdd:MTH00163 334 KGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLiswsKLSMIFLMLL----SFFSAAYSLYLYSYSQHGKYYS 409
|
410 420
....*....|....*....|..
gi 1778127934 440 LLTPVKDLNRREYYLLISLIIP 461
Cdd:MTH00163 410 GLYSCSSGKVREYLLLFLHWLP 431
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
71-472 |
2.42e-72 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 235.99 E-value: 2.42e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 71 QLNFCHLNFGVDGISLYFVLLTTFVTPIALLSNYANINK----NLKIFLVSFLLLESLQICAFVSLDLLLFYVFFESVLP 146
Cdd:MTH00206 47 GWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNepinRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLI 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 147 ILFIVIIIFGHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLYEISLDSQKLLWLGFFLAFAVKTPLY 226
Cdd:MTH00206 127 PTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSKLTTWNNNLWWLACILAFLVKLPLY 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 227 PFIIWLPKAHADSPLAGSIILAATILKLATYGYLRVLINFLPDATNYFNPLIqTIAVIAIIYASLSTIIQQDTKRLIAYS 306
Cdd:MTH00206 207 GVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYFFI-ILGLWGSIMTSSICLRQTDLKSLIAYS 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 307 SIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFiCVGGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTG 386
Cdd:MTH00206 286 SVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALF-CLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLG 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 387 IPLSLNFLGEQLSLIGIWIQNPIIAALGATGIVLSACYSLFLFNRLSYGKLSPLLTPVKDLNRREYYLLISLIIPTIAFG 466
Cdd:MTH00206 365 LPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLI 444
|
....*.
gi 1778127934 467 ILPDVL 472
Cdd:MTH00206 445 LNPNLI 450
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
34-483 |
2.02e-71 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 235.31 E-value: 2.02e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 34 IKQIALITSLINFFISLFI-WYQFDSNTTQYQFVSEFNQLNFCHLNF--GVDGISLYFVLLTTFVTPIALLSNYaNINKN 110
Cdd:PRK12561 7 VRWYALGVGLADFALMCYVfWQHYDPSSSSLQLVERYAWLPQIGLEWslGVDGLSMPLVLLSGLITTLSIFASW-KVTRK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 111 LKIFLVSFLLLESLQICAFVSLDLLLFYVFFESVLPILFIVIIIFGhGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYI 190
Cdd:PRK12561 86 PRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWG-GQKRLYAATKFILYTALASIFILVAGLALALSG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 191 GSTDFQL--ISLYEISLDSQKLLWLGFFLAFAVKTPLYPFIIWLPKAHADSPLAGSIILAATILKLATYGYLRVLINFLP 268
Cdd:PRK12561 165 DTFTFDLaeLGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLP 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 269 DATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFIcVG 348
Cdd:PRK12561 245 DAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFF-LT 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 349 GIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFLGEQLSLIGIWIQN-------PIIAALGATGIVLS 421
Cdd:PRK12561 324 GVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFLGITSSDvysstfrTITILLAAVGLILT 403
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1778127934 422 ACYSLFLFNRLSYGKLS---PLLTPVKDLNRREYYLLISLIIPTIAFGILPDVLLDSLHTSVSAL 483
Cdd:PRK12561 404 PIYLLSMLRRVFYGPRSellPALAVVEDAKPRELFIALSLLVPIIGIGFYPKLATQLYDVKTVAL 468
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
1-484 |
4.43e-68 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 226.12 E-value: 4.43e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 1 MITSLILIPIIGSLLILLYPESTDQGKnkhtlsIKQIALITSLINFFISLFIWYQFDSNTTQYQFVSEFNQLNFCHLNF- 79
Cdd:PRK06473 1 MLSALIWIPLLGAILIGFWPSGINGKL------ARSVALVIASVLLLLSLVLAFQFDPGNPNQQFTEFIPWIDSLGLSYh 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 80 -GVDGISLYFVLLTTFVTPIALLSNYANINKNlKIFLVSFLLLESLQICAFVSLDLLLFYVFFESVLPILFIVIIIFGhG 158
Cdd:PRK06473 75 lGVDGLSLPLLVLNSLLTLIAIYSSDESIQRP-RFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWG-G 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 159 NDRFRSAFLLFLYTLAGSLPMLLCIL--VIYSYIGSTDFQLISLYEISLDSQKLLWLGFFLAFAVKTPLYPFIIWLPKAH 236
Cdd:PRK06473 153 QRRGYAATKFLLYTAISGILILVSFLglVWLSGASSFDYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAH 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 237 ADSPLAGSIILAATILKLATYGYLRVLINFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVL 316
Cdd:PRK06473 233 VEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILL 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 317 GLFSNTIQGIEGAILLALAHGFVSPALFICVgGIIYDRTGTRVINYIRGLVTY---MPVFTILFFVFTLANTGIPLSLNF 393
Cdd:PRK06473 313 AAAAATPLSILAAVFQMISHGLISALLFLLV-GVVYKKTGSRDVDVLRGLLNPergLPITGSLMILGVMASAGIPGMVGF 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 394 LGEQLSLIGIWIQNPIIAALGATGIVLSACYSLFLFNRLSYGKLSPLLTPVKDLNRREYYLLISLIIPTIAFGILPDVLL 473
Cdd:PRK06473 392 IAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPRVLWSERLPALVLAVLIVVLGIQPSWLV 471
|
490
....*....|.
gi 1778127934 474 DSLHTSVSALL 484
Cdd:PRK06473 472 RWTEPTATALL 482
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
2-484 |
3.59e-66 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 220.97 E-value: 3.59e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 2 ITSLILIPIIGSLLILLYPestdQGKNKhtlSIKQIALITSLINFFISLFIW-YQFDSNTTQYQFVSEFNQLNF--CHLN 78
Cdd:CHL00011 7 LTIIVVLPIFAGSLIFFLP----HRGNK---VIRWYTLCICLLELLLTTYAFcYHFQLDDPLIQLKEDYKWINFfdFHWR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 79 FGVDGISLYFVLLTTFVTPIALLSNYAnINKNLKIFLVSFLLLESLQICAFVSLDLLLFYVFFESVLPILFIVIIIFGhG 158
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAWP-VTRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWG-G 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 159 NDRFRSAFLLFLYTLAGSLPMLLCILVIYSY---IGSTDFQLISLYEISLDSQKLLWLGFFLAFAVKTPLYPFIIWLPKA 235
Cdd:CHL00011 158 KKRLYSATKFILYTAGGSIFLLIGVLGMGLYgsnEPTLNFETLANQSYPVALEILFYIGFLIAYAVKLPIIPLHTWLPDT 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 236 HADSPLAGSIILAATILKLATYGYLRVLINFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVV 315
Cdd:CHL00011 238 HGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 316 LGLFSNTIQGIEGAILLALAHGFVSPALFIcVGGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFLG 395
Cdd:CHL00011 318 IGIGSITDTGLNGAILQIISHGFIGAALFF-LAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVA 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 396 EQLSLIGIwIQNP--------IIAALGATGIVLSACYSLFLFNRLSYG-KLSPLLTP-VKDLNRREYYLLISLIIPTIAF 465
Cdd:CHL00011 397 ELIVFFGI-ITSQkyllmpkiLITFVMAIGMILTPIYLLSMLRQMFYGyKLFNVPNSyFFDSGPRELFISICILLPVIGI 475
|
490
....*....|....*....
gi 1778127934 466 GILPDVLLDSLHTSVSALL 484
Cdd:CHL00011 476 GIYPDFVLSLSVDKVEAIL 494
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
2-483 |
1.56e-65 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 220.35 E-value: 1.56e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 2 ITSLILIPIIGSLLILLYPestDQGKNKhtlSIKQIALITSLINFFISLFIWY-QFDSNTTQYQFVSEFNQLNFCHLNF- 79
Cdd:PRK02546 9 LTTIILFPIVAALLIPFIP---DKGDGK---TVRWYALIVGLIDFLITVYAFYtGYDFSNPGLQLVESYSWLPQLGLTWs 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 80 -GVDGISLYFVLLTTFVTPIALLSNYANINKNlKIFLVSFLLLESLQICAFVSLDLLLFYVFFESVLPILFIVIIIFGhG 158
Cdd:PRK02546 83 vGADGLSMPLILLTGFITTLAVLAAWPVTFKP-KLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWG-G 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 159 NDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIG--STDFQLISLYEISLDSQKLLWLGFFLAFAVKTPLYPFIIWLPKAH 236
Cdd:PRK02546 161 KKRQYAATKFILYTAGSSLFILLAALAMAFYGDtpTFDMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAH 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 237 ADSPLAGSIILAATILKLATYGYLRVLINFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVL 316
Cdd:PRK02546 241 GEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 317 GLFSNTIQGIEGAILLALAHGFVSPALFICVGGiIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFLGE 396
Cdd:PRK02546 321 GIGSFTDLGTSGAMLQMISHGLIGASLFFLVGA-TYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAE 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 397 QLSLIGIWIQNP-------IIAALGATGIVLSACYSLFLFNRLSYGKLSPLLTP---VKDLNRREYYLLISLIIPTIAFG 466
Cdd:PRK02546 400 LMVFVGFATSDAytlpfrvVVVFLAAVGVILTPIYLLSMLREIFFGPENKELVShekLVDAEPREVFIIACLLVPIIGIG 479
|
490
....*....|....*..
gi 1778127934 467 ILPDVLLDSLHTSVSAL 483
Cdd:PRK02546 480 LYPKLVTQSYDATTNQL 496
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
65-472 |
7.27e-65 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 216.71 E-value: 7.27e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 65 FVSEFNQLNFCHLNFGVDGISLYFVLLTTFVTPIALLSNYANINKN----LKIFLVSFLLLESLQICAFVSLDLLLFYVF 140
Cdd:MTH00068 42 FNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILASQNHLKNEpinrQRTYISMLIILQLTLILAFSATELILFYIF 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 141 FESVLPILFIVIIIFGHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGS---TDFQLISLYEISLDSQKLLWLGFFL 217
Cdd:MTH00068 122 FEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSlslILLELMSPMQLMTYTNKIWWLACLL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 218 AFAVKTPLYPFIIWLPKAHADSPLAGSIILAATILKLATYGYLRVLINFLPDATNYFNPLIqTIAVIAIIYASLSTIIQQ 297
Cdd:MTH00068 202 AFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKELSYPFI-ILALWGVLMTSLICLRQT 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 298 DTKRLIAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFiCVGGIIYDRTGTRVINYIRGLVTYMPVFTILF 377
Cdd:MTH00068 281 DLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALF-CLANTNYERTHSRTLLLLRGAQTILPLMATWW 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 378 FVFTLANTGIPLSLNFLGEQLSLIGIWIQNPIIAALGATGIVLSACYSLFLFNRLSYGKLSPLLTPVKDLNRREYYLLIS 457
Cdd:MTH00068 360 LLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLAL 439
|
410
....*....|....*
gi 1778127934 458 LIIPTIAFGILPDVL 472
Cdd:MTH00068 440 HILPMLLLILKPELI 454
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
37-473 |
1.44e-64 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 216.00 E-value: 1.44e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 37 IALITSLINFFISLFIWyqfdSNTTQYQFvsefnqlNFCHLNFGVDGISLYFVLLTTFVTPIALL------SNYANINKN 110
Cdd:MTH00044 26 ISISQSSLISLLSLFLL----NNHWSSSW-------HNLSLSLATDSLSSPLIILSCWLAPLSLLasinhlSNNSPNNQR 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 111 LKIFLVSFLLLeSLqICAFVSLDLLLFYVFFESVLPILFIVIIIFGHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYI 190
Cdd:MTH00044 95 TFISLIIIILT-AL-IITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSS 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 191 GSTDFQLISLYEI---SLDSQKLLWLGFFLAFAVKTPLYPFIIWLPKAHADSPLAGSIILAATILKLATYGYLRVLINFL 267
Cdd:MTH00044 173 SSLSIPLSELNWLtslSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFS 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 268 PDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFiCV 347
Cdd:MTH00044 253 LPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALF-CL 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 348 GGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFLGEQLSLIGIWIQNPIIAALGATGIVLSACYSLF 427
Cdd:MTH00044 332 ANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLL 411
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1778127934 428 LFNRLSYGKLSPLLTPVKDLNRREYYLLISLIIPTIAFGILPDVLL 473
Cdd:MTH00044 412 IYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
70-464 |
1.89e-63 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 212.75 E-value: 1.89e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 70 NQLNFCHLNFGVDGISLYFVLLTTFVTPIALLSNYANINK----NLKIFLVSFLLLESLQICAFVSLDLLLFYVFFESVL 145
Cdd:MTH00124 47 YPTKNLTQWLGIDQISAPLLVLSCWLLPLMILASQNHLQHeplqRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATL 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 146 PILFIVIIIFGHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLYEISLDSQK---LLWLGFFLAFAVK 222
Cdd:MTH00124 127 IPTLILITRWGNQPERLSAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMLQLTHPTLTNSWtnlLLWLACLMAFMVK 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 223 TPLYPFIIWLPKAHADSPLAGSIILAATILKLATYGYLRVLINFLPDATNYFNPLIqTIAVIAIIYASLSTIIQQDTKRL 302
Cdd:MTH00124 207 MPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFL-TLALWGALMTSLICLRQTDLKSL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 303 IAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFiCVGGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTL 382
Cdd:MTH00124 286 IAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLF-CLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANL 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 383 ANTGIPLSLNFLGEQLSLIGIWIQNPIIAALGATGIVLSACYSLFLFNRLSYGKLSPLLTPVKDLNRREYYLLISLIIPT 462
Cdd:MTH00124 365 TNMALPPTINLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPL 444
|
..
gi 1778127934 463 IA 464
Cdd:MTH00124 445 LL 446
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
131-413 |
4.01e-62 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 204.47 E-value: 4.01e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 131 SLDLLLFYVFFESVLPILFIVIIIFGHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLYEISLDS--- 207
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 208 QKLLWLGFFLAFAVKTPLYPFIIWLPKAHADSPLAGSIILAATILKLATYGYLRVLINFLPDATNYFNPLIqTIAVIAII 287
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILL-ILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 288 YASLSTIIQQDTKRLIAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFICVGGIIYDRTGTRVINYIRGLV 367
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1778127934 368 TYMPVFTILFFVFTLANTGIPLSLNFLGEQLSLIGIWIQNPIIAAL 413
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVL 285
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
65-461 |
2.79e-61 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 206.75 E-value: 2.79e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 65 FVSEFNQLNFCHLNFGVDGISLYFVLLTTFVTPIALLSNY--ANINKNLKIFLVSFLLLESLQICAFVSLDLLLFYVFFE 142
Cdd:MTH00205 39 FSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYkvFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFE 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 143 SVLPILFIVIIIFGHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLYEISLDSQKLLWLGFFLAFAVK 222
Cdd:MTH00205 119 ASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLFLYWIFLMLAFLVK 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 223 TPLYPFIIWLPKAHADSPLAGSIILAATILKLATYGYLRVlINFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRL 302
Cdd:MTH00205 199 LPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRI-TSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSL 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 303 IAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFiCVGGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTL 382
Cdd:MTH00205 278 IAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMF-ALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLIS 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 383 ANTGIPLSLNFLGEqLSLIGIWIQNPIIAALGATGIV-LSACYSLFLFNRLSYGKLSPLLTPVKDLNRREYYLLISLIIP 461
Cdd:MTH00205 357 CNMAAPPSLNLASE-ILLIMSLLSSSKISGIPLSLISfLSGAYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFP 435
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
32-472 |
1.80e-58 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 199.58 E-value: 1.80e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 32 LSIKQIALITSLINFFISLFIWYQFDSNTTQYQFVSEFnqlnfchlnFGVDGISLYFVLLTTFVTPIALLSNYA--NINK 109
Cdd:MTH00014 17 IKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTES---------LSSDMLSAPLITLTLWITALMILASFKifQNNK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 110 NLKIFLVSFLLLESLQICAFVSLDLLLFYVFFESVLPILFIVIIIFGHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSY 189
Cdd:MTH00014 88 APKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYT 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 190 IGSTDFQLISLYEISLDSQKLLWLGFFLAFAVKTPLYPFIIWLPKAHADSPLAGSIILAATILKLATYGYLRVLINFLPD 269
Cdd:MTH00014 168 NNSLSMLMSSMEPPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSLFMHI 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 270 ATNYFNPLIqTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFIcVGG 349
Cdd:MTH00014 248 NKSLSAPFS-SISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFA-LAN 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 350 IIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFLGEQLSLIGIWIQNPIIAALGATGIVLSACYSLFLF 429
Cdd:MTH00014 326 MTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFLY 405
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1778127934 430 NRLSYGKLSPLLTPVKDLNRREYYLLISLIIPTIAFGILPDVL 472
Cdd:MTH00014 406 TSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-433 |
5.42e-56 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 192.28 E-value: 5.42e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 1 MITSLILIPIIGSLLILLYPESTDQGKNkhtlsikqIALITSLINFFISLFIWYQFDSNTTQYQFVSEFnqLNFCHLNFG 80
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLGRRRRLQRA--------LSLLASLALLALALALLLQVLAGGPLVYALGGW--PAPFGIVLV 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 81 VDGISLYFVLLTTFVTPIALLSNYANIN--KNLKIFLVSFLLLESLQICAFVSLDLLLFYVFFEsVLPILFIVIIIFGHG 158
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRheRRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFE-VMLLASYGLVALGGT 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 159 NDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLYEISLDSQ--KLLWLGFFLAFAVKTPLYPFIIWLPKAH 236
Cdd:COG0651 153 KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGllLAAFALLLVGFGIKAALFPLHFWLPDAY 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 237 ADSPLAGSIILAATILKLATYGYLRVLINFLP-DATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVV 315
Cdd:COG0651 233 PAAPSPVSALLSGLLTKVGVYAILRVLTLLFGaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYIL 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 316 LGLFSNTIQGIEGAILLALAHGFVSPALFICVGGIIYdRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFLG 395
Cdd:COG0651 313 LGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIER-ATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVS 391
|
410 420 430
....*....|....*....|....*....|....*....
gi 1778127934 396 EQLSLIGIWIQN-PIIAALGATGIVLSACYSLFLFNRLS 433
Cdd:COG0651 392 KWLLLQAALEAGaWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
42-473 |
8.19e-54 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 187.41 E-value: 8.19e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 42 SLINFFISLFIWYQFDSNTtqyqfvsefnqLNFcHLNFGVDGISLYFVLLTTFVTPIALLSNYANINK----NLKIFLVS 117
Cdd:MTH00110 31 SLLISLISLLLLNQPNDNS-----------LNF-SLLFFSDSLSTPLLILTTWLLPLMLMASQHHLSKepltRKKLYITM 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 118 FLLLESLQICAFVSLDLLLFYVFFESVLPILFIVIIIFGHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQL 197
Cdd:MTH00110 99 LILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFLL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 198 ISLYEISLD---SQKLLWLGFFLAFAVKTPLYPFIIWLPKAHADSPLAGSIILAATILKLATYGYLRVLInFLPDATNYF 274
Cdd:MTH00110 179 LQLWAQPLPnswSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITI-ILNPLTEFM 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 275 NPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFiCVGGIIYDR 354
Cdd:MTH00110 258 AYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLF-CLANSNYER 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 355 TGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFLGEQLSLIGI--WiQNPIIAALGaTGIVLSACYSLFLFNRL 432
Cdd:MTH00110 337 IHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSfsW-SNITIILMG-LNMLITALYSLYMLITT 414
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1778127934 433 SYGKLSPLLTPVKDLNRREYYLLISLIIPTIAFGILPDVLL 473
Cdd:MTH00110 415 QRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIIL 455
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
80-463 |
1.61e-53 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 186.70 E-value: 1.61e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 80 GVDGISLYFVLLTTFVTPIALLSNYANINKNLKIFLVSFL-LLESLQ---ICAFVSLDLLLFYVFFESVLPILFIVIIIF 155
Cdd:MTH00127 58 ATDPLSTPLLVLTCWLLPLMILASQNHTAPEPINRQRMYItLLTSLQiflILAFGATEIIMFYVMFEATLIPTLIIITRW 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 156 GHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDF---QLISLYEISLDSQKLLWLGFFLAFAVKTPLYPFIIWL 232
Cdd:MTH00127 138 GNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMltlQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWL 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 233 PKAHADSPLAGSIILAATILKLATYGYLRVLINFLPDATNYFNPLIqTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMG 312
Cdd:MTH00127 218 PKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFI-ILALWGIIMTGSICLRQTDLKSLIAYSSVSHMG 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 313 VVVLGLFSNTIQGIEGAILLALAHGFVSPALFiCVGGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLN 392
Cdd:MTH00127 297 LVAGGILIQTPWGFTGALILMIAHGLTSSALF-CLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPN 375
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1778127934 393 FLGEQLSLIGIWIQNPIIAALGATGIVLSACYSLFLFNRLSYGKLSPLLTPVKDLNRREYYLLISLIIPTI 463
Cdd:MTH00127 376 LMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLL 446
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
1-468 |
6.73e-52 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 183.37 E-value: 6.73e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 1 MITSLILIPIIGSLLILLYPESTDQGKnkhtlsIKQIALITSLINFFISLFIWYQFDSNTTQYQFVSEFNQLNFCHLNF- 79
Cdd:PRK07363 1 MLSVLLWLPILGAIIIGFFPGNLPSAR------LRQITLVFAVLVLAWSLFLLTQFDLSDPGMQFQEYLPWNEPLGLSYs 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 80 -GVDGISLYFVLLTTFVTPIALLSNYANINKNlKIFLVSFLLLESLQICAFVSLDLLLFYVFFESVLPILFIVIIIFGhG 158
Cdd:PRK07363 75 lGVDGLSLPLLVLNSLLTWIAIYSIGENTERP-RLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWG-G 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 159 NDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGST--DFQLISLYEISLDSQKLLWLGFFLAFAVKTPLYPFIIWLPKAH 236
Cdd:PRK07363 153 EKRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTsfDYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAY 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 237 ADSPLAGSIILAATILKLATYGYLRVLINFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVL 316
Cdd:PRK07363 233 TEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILV 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 317 GLFSNTIQGIEGAILLALAHGFVSPALFICVgGIIYDRTGTRVINYIRGL---VTYMPVFTILFFVFTLANTGIPLSLNF 393
Cdd:PRK07363 313 AAAAGTQLSLLGAVAQMISHGLILALLFHLV-GIVERKVGTRDLDVLNGLmnpIRGLPLTSALLVLAGMASAGIPGLVGF 391
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1778127934 394 LGEQLSLIGIWIQNPIIAALGATGIVLSACYSLFLFNRLSYGKLSplltpvkdlNRREYY--LLISLIIPTIAFGIL 468
Cdd:PRK07363 392 VAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLD---------NKLAYYpkVLWSEKIPALILTAL 459
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
79-484 |
2.85e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 128.84 E-value: 2.85e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 79 FGVDGISLYFVLLTTFVTPIALLSNYANINKNLKIFLVSFLLLESLQICAFVSLDLLLFYVFFEsVLPILFIVIIIFGHG 158
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAIGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLE-IMSLSSYALVAMGGD 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 159 NDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISlyEISLDSQKLLWLGFF--LAFAVKTPLYPFIIWLPKAH 236
Cdd:PRK08375 152 RRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLA--GALAENPTVVTAFGFvlLALALKAAVFPLHTWLPRAY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 237 ADSPLAGSIILAATILKLATYGYLRVLINF----LPDATNYFNPLIqTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMG 312
Cdd:PRK08375 230 PAAPPVVTALLSGLVTKVAVYALIRIYFTVfggdFRFALGLGWLLA-VLALLSMLVGSLAALGQDDVKRVLAYSTVSQMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 313 VVVLGLFSNTIQGIEGAILLALAHGFVSPALFICVGGiIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLN 392
Cdd:PRK08375 309 YILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGA-IEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSG 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 393 FLGEQLSLIGIW--IQNPIIAALGATGIvLSACYSLFLFNRLSYGKlsPLLTPVKDLNRREYYLLI---SLIIPTIAFGI 467
Cdd:PRK08375 388 FVSKWYLVVGAVeaGQWLVLAVLLASSL-LALLYFLRIWYRAFFGP--PPPGSEAPKQEAPLGMLApslALALLSLLLGI 464
|
410
....*....|....*..
gi 1778127934 468 LPDVLLDSLHTSVSALL 484
Cdd:PRK08375 465 YAGPLLQLADAAAAGLL 481
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
69-436 |
1.89e-30 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 122.32 E-value: 1.89e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 69 FNQLNFCHLNFGVDgiSLYFVLLTTFVTPIALLSNYANINKNLkIFLVSFLLLesLQICAFVSLDLLLFYVFFE-SVLPI 147
Cdd:MTH00094 24 FNNYSWSGLFFFFD--SFVFVLLIFMMVFILGLVLLSEKNFNL-LILSNLLIL--ICLLFFVSSNMLMLYMFFElSMFPI 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 148 LFIvIIIFGHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLYEISLDsqkllwlgFFLAFAVKTPLYP 227
Cdd:MTH00094 99 LIM-ILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLSWEMFFI--------LSLSFMMKFPVYF 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 228 FIIWLPKAHADSPLAGSIILAATILKLATYGYLRVLINFlpdATNYFNPLIqTIAVIAIIYASLSTIIQQDTKRLIAYSS 307
Cdd:MTH00094 170 LHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSL---NFVYNNFWI-IFSLLGMILSSFCCVFQSDSKSLAAYSS 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 308 IAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFICVgGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGI 387
Cdd:MTH00094 246 VTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLI-GEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGV 324
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1778127934 388 PLSLNFLGEQLSLIGIWIQNPIIAALGATGIVLSACYSLFLFNRLSYGK 436
Cdd:MTH00094 325 PPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGK 373
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-476 |
3.28e-30 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 123.95 E-value: 3.28e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 2 ITSLILIPIIGSLLILLYpestdQGKNKHtlsikqialITSLINFFISLF--IWYQFDSNTTQYQFVSEFNQLNfchLNF 79
Cdd:PRK08668 3 LTLLLLTPLIGSVLAYLL-----KKINEK---------IGVIGNALPLLFliKLYFTLKVGTGEKLTLFFGGFK---LTF 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 80 GVDGISLYFVLLTTFVTPIALLSNYANINKNLKIFLVSFLLLESLQICAFVSLDLLLFYVFFEsvLPILFIVIIIFGHGN 159
Cdd:PRK08668 66 TLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWE--IMTFSSFMMVPMGKK 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 160 DRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLIS--LYEISLDSQKLLWLGFFLAFAV-KTPLYPFIIWLPKAH 236
Cdd:PRK08668 144 ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISqgLINDTSTGFALIVFLFLLAFGVaKAGIFPLHVWAPDAY 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 237 ADSPLAGSIILAATILKLATYGYLRVL-----INFLPDATNY-----FNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYS 306
Cdd:PRK08668 224 SEAPQSFSAVLSGQLSKLGAYGFLLVLyvlpgTKLFSEFGTYrgvplFNYILAWLGNISIIVGTLMAILQEDIKKLIAYS 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 307 SIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFICVGGIIYdRTGTRVINYIRGLVTYMPVFTILFFVFTLANTG 386
Cdd:PRK08668 304 SVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIY-RTGTTKISEMGGLIEKMPFTFAMYLVAIISLAG 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 387 IPLSLNFLGEQLSLIGIWIQN-PIIAALGATGIVLSACYSLFLFNRLSYGKLSPLLTPVKDLNRREYYLLISLIIPTIAF 465
Cdd:PRK08668 383 IPPMSGFASKWLIFEALISKGmPITAFMAFFGSIGSFLYVFRPLAGVFLGQLPSDHKDVKEAPLPMLIPMAILVLLNVVF 462
|
490
....*....|.
gi 1778127934 466 GILPDVLLDSL 476
Cdd:PRK08668 463 GVAPGLVLQEI 473
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
79-474 |
3.97e-29 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 119.67 E-value: 3.97e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 79 FGVDGISLYFVLLTTFVTPIALLSNYANINKNL-KIFLVSFLLLESLQIC-AFVSLDLLLFYVFFEsVLPILFIVIIIFG 156
Cdd:PRK12663 73 FTGDSLSALMVTTASFVATAIMAYGFGDIEHSGrRYGFPPFILLLMAGVIgSFLTGDLFNLYVWFE-VMLIASFVLITLG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 157 HGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLYEISLDSQK---LLWLGFFLAFAVKTPLYPFIiWLP 233
Cdd:PRK12663 152 QEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTAtltTIALLFLLAFGMKAALFPFM-WLP 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 234 KAHADSPLAGSIILAATILKLATYGYLRVLINFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGV 313
Cdd:PRK12663 231 AAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGF 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 314 VVLGLFSNTIQGIEGAILLALAHGFVSPALFICVGGIIYdRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNF 393
Cdd:PRK12663 311 ILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGF 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 394 LGEQLSL-----IGIWIqnpIIAALGATGIVlsACYSLFLFNRLSY-GKLSPLLTPVKDLNRREYYLLISLIIPTIAFGI 467
Cdd:PRK12663 390 WGKVLLVqgaldNGAYI---LLALMLITSLI--TMYSLFRIFFLAYwGDKDGEEVNFKPIPLYRKLPLSILAVVVIAMGI 464
|
....*..
gi 1778127934 468 LPDVLLD 474
Cdd:PRK12663 465 AAEPLLN 471
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
81-486 |
4.79e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 105.05 E-value: 4.79e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 81 VDGISLYFVLLTTFVTPIALLSNYANINKNLKI--FLVSFLLLESLQICAFVSLDLLLFYVFFESVLPILFIVIIIFGHG 158
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHESGPewYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDR 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 159 NDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLYEISLDSQK------------LLWLGFFL-AFAVKTPL 225
Cdd:PRK12667 160 GDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLtgglagnpplalGVALALALwAFTIKAAI 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 226 YPFIIWLPKAHADSPLAGSIILAATILKLATYGYLRVL------INFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDT 299
Cdd:PRK12667 240 FPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDV 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 300 KRLIAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFICVGGIIyDRTGTRVINYIRGLVTYMPVFTILFFV 379
Cdd:PRK12667 320 KRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFI-HAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 380 FTLANTGIPLSLNFLGEQLSLIGIWIQNPIIAALgatGIVLSACYSLFLFNRLSYGKLSPLLTPVKDLNRREYY----LL 455
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESGFYLPAL---VLLIASAISLVGYFRAWYSLFFGKPKSGEEVEHKESPsmsvVI 475
|
410 420 430
....*....|....*....|....*....|....*
gi 1778127934 456 ISLIIPTIAFGIL----PDVLLDSLHTSVSALLFF 486
Cdd:PRK12667 476 LVLALAVLILGILalflPEILDSLIEPAANQAMDP 510
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-476 |
5.86e-23 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 102.15 E-value: 5.86e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 1 MITSLILIPIIGSLLILLYPESTdqgkNKHTLSIkqIALITSLINFFISLFIWYQFDSNTTQYQFVSEFNQLNFcHLNFG 80
Cdd:COG1009 3 LLWLIPLLPLLGALLAGLLGRRL----GRRAAGW--LAALAPLAAFVLSLLLFPAVLGGEVVVELYTWIPVGSL-GLDFG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 81 --VDGISLYFVLLTTFVTPIALL--SNYANINKNLKIFLvSFLLLESLQICAFV-SLDLLLFYVFFE--SVLPILFIvii 153
Cdd:COG1009 76 frLDGLSLLMLLLVTGVGLLVHIysIGYMSGDPGLARFF-AYLLLFMAAMLGLVlSDNLLLLFVFWElvGLCSYLLI--- 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 154 ifGHGNDRF---RSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQ-LISLYEISLDSQKLLWLGFFLAFAV--KTPLYP 227
Cdd:COG1009 152 --GFWYEKPsarRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSeLLAAAPTILSSPLLTLILLLLLLGAfgKSAQFP 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 228 FIIWLPKAhadspLAG-----SIILAATILKLatyG-YLRVLINFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKR 301
Cdd:COG1009 230 LHFWLPDA-----MEGptpvsALLHAATMVKA---GvYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKR 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 302 LIAYSSIAHMGVVVLGLFsntIQGIEGAILLALAHGFVSPALFICVGGIIYdRTGTRVINYIRGLVTYMPVFTILFFVFT 381
Cdd:COG1009 302 VLAYSTVSQLGYMFLALG---VGAYVAALFHLLTHAFFKALLFLGAGSVIH-ATGTRDIRKMGGLRKKMPITAITFLIGA 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 382 LANTGIPLSLNFLGEQLSLIGIW---IQNPIIAALGATGIVLSACYSLFLFNRLSYGKL-SPLLTPVKDLNRREYYLLIS 457
Cdd:COG1009 378 LSLAGIPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPrPKTPKHPHESPWLMTLPLVV 457
|
490
....*....|....*....
gi 1778127934 458 LIIPTIAFGILPDVLLDSL 476
Cdd:COG1009 458 LAVLSLVLGLLLPGLLEGL 476
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
79-398 |
6.48e-23 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 102.12 E-value: 6.48e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 79 FGVDGISLYFVLLTTFVTP-IALLSN------YANINKNLKIFLVSFLLLESLQICAfvSLDLLLFYVFFESVLPILFIV 151
Cdd:PRK08667 73 FHIDRLAAFFIILIGLVSLcVAIYSLgynehmSSNERANLLSALTALFILSMLGVVA--SANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 152 IIIFGHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFqliSLYEISLDSQKLLWLGFFLAFAVKTPLYPFIIW 231
Cdd:PRK08667 151 VMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFEL---SPLGASAGILSLVFLLLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 232 LPKAHADSPLAGSIILAATILKLATYGYLRVLINFL-PDATNYFNPLI--QTIAVIAIIYAslstIIQQDTKRLIAYSSI 308
Cdd:PRK08667 228 LPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLsPELWWGVLILLagSISALLGVIYA----LKEHDLKGLLAYSSI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 309 AHMGVVVLGLFSNTIQGIEG-----------AILLALAHGFVSPALFICVGGIIYdRTGTRVINYIRGLVTYMPVFTILF 377
Cdd:PRK08667 304 ENIGIILMGIGLYVIFGVYGldtlallalggALFHSLNHALFKSLLFLTAGSVVH-ATGTRNIEKMGGLVKLMPYTSALF 382
|
330 340
....*....|....*....|.
gi 1778127934 378 FVFTLANTGIPLSLNFLGEQL 398
Cdd:PRK08667 383 LVGAVSIAALPPFNGFASELL 403
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
5-480 |
3.11e-22 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 99.04 E-value: 3.11e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 5 LILIPII---GSLLILLYPESTDQGKNKHTLSIkqIALITSLINFFISLFIWyqfdsnttQYQFVSEFNQLnfchlnFGV 81
Cdd:COG1007 5 LALLPEIillLGALVLLLLDLFLPRRSRRLLAG--LALLGLLLALALLLLAL--------GGGTGTAFGGM------FVV 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 82 DGISLYF---VLLTTFVTpIALLSNYANINKNLKIFLVSFLLLESLQICAFVS-LDLLLFYVFFEsVLPILFIVIIIFGH 157
Cdd:COG1007 69 DGFALFFkllILLAALLV-LLLSRDYLERRGLLRGEFYALLLFATLGMMLMASaNDLLTLFLGLE-LLSLSLYVLVAFRR 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 158 GNDR-FRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLY-EISLDSQKLLWLGFFL---AFAVKTPLYPFIIWL 232
Cdd:COG1007 147 DDRRsSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAAlAAGGANSPLLLLGLVLvlaGLAFKLSAVPFHMWT 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 233 PKA--HADSPLAGsiiLAATILKLATYGYL-RVLINFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIA 309
Cdd:COG1007 227 PDVyeGAPTPVTA---FLATAPKIAAFAALlRLLVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIA 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 310 HMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFICVGGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPL 389
Cdd:COG1007 304 HAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPP 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 390 SLNFLGEQLSLIGIWIQN-PIIAALGATGIVLSACYSLFLFnRLSYGKLSPLLTPVKdLNRREYYLLISLIIPTIAFGIL 468
Cdd:COG1007 384 TAGFFGKFYVFSAAVEAGlYWLAVIAVLNSVISAYYYLRVV-KAMYFDEPEEEAPIS-APPGLRVALVIAALLVLLLGIF 461
|
490
....*....|..
gi 1778127934 469 PDVLLDSLHTSV 480
Cdd:COG1007 462 PGPLLDLAAAAA 473
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-395 |
5.89e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 98.48 E-value: 5.89e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 1 MITSLILIPII-GSLLILLypestdqgkNKHTLSIKQIALITSLINFFISLFIWYQFDSNTTQYQFVSEFNQLnfCHLNF 79
Cdd:PRK07691 5 LVILPILIPVItAILLIFL---------GKRPIIQRYVALIGSLLTLVAAIILVANVYKHGIQTLELGNWKAP--FGIVF 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 80 GVDGISLYFVLLTTFVTPIALLSNYANINKNLK--IFLVSFLLLESLQICAFVSLDLLLFYVFFEsVLPILFIVIIIFGH 157
Cdd:PRK07691 74 VADMFAALLVLTSSIITFLVILYSFQTIGIEREryYYYPSVLFMLAGVNGAFLTGDIFNLFVFFE-VMLMASYVLIVIGG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 158 GNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLIS--LYEISLDSQKLL---WLGFFLAFAVKTPLYPFIIWL 232
Cdd:PRK07691 153 TKIQLRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISvkIAELSAGQTGLItvvAILFLFVFATKAGLFPLYFWL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 233 PKAHADSPLAGSIILAATILKLATYGYLRVLINFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMG 312
Cdd:PRK07691 233 PGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 313 VVVLGLFSNTIQGIEGAILLALAHGFVSPALFIcVGGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLN 392
Cdd:PRK07691 313 VILVGVAMMTESGMIGAIYYLIHDMIVKAALFL-LIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSG 391
|
...
gi 1778127934 393 FLG 395
Cdd:PRK07691 392 FYG 394
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-395 |
2.07e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 96.96 E-value: 2.07e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 113 IFLVSFLLLESLQICAFVSLDLLLFYVFFESVLPILFiVIIIFGHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGS 192
Cdd:PRK12665 112 IFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASY-VLLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 193 TDFQLIS--LYEISLDSQKLLWLGFFLAFAVKTPLYPFIIWLPKAHADSPLAGSIILAATILKLATYGYLRVLINFLPDA 270
Cdd:PRK12665 191 LNMADLAvrLDELPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGG 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 271 TnyFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFIcVGGI 350
Cdd:PRK12665 271 G--LDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFL-VVGL 347
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1778127934 351 IYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFLG 395
Cdd:PRK12665 348 IERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIG 392
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
6-463 |
2.28e-21 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 96.58 E-value: 2.28e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 6 ILIPIIGSLLILLYPESTdqgknkhtlsIKQIALITSLINFFISLFIWYQFDSNTTQYQFVSEFNQLNFCHLNFGVDGIS 85
Cdd:PRK06525 8 LLLPFIGALVVFFLPGRR----------AAELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNLGDVALFGLVIDPVS 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 86 lyfVLLTTFVTPIALL-SNYAN-----------INKNLKIFLvSFLLLESLQICAFV-SLDLLLFYVFFESVLPILFIVI 152
Cdd:PRK06525 78 ---VLIGFVVVLLGLLvTLYSTgymspgnrehpVHEGTGRYY-AFLLLFIGAMAGLVySSTLLGLLLFFEITGLCSWALI 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 153 IIFGHGNDRfRSAFLLFLYTLAGSLPMLLCILVIYSYIGStdFQLISLYEISLDSQKLLWLGFFLAFAVKTPLYPFIIWL 232
Cdd:PRK06525 154 SYYQSPKAL-RSALKALLITHIGSLGLYLAAATLFLQTGT--FALSALSGLHGSLKYLVFLGILFAAWGKSAQLPFYSWL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 233 PKAHADSPLAGSIILAATILKLATYGYLRVLInFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMG 312
Cdd:PRK06525 231 PDAMEAPTPASAYLHAASMVKVGVYIFARAIQ-SMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLG 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 313 VVVLGL----FSNTIqGIEGAILLALAHGFVSPALFICVGGIIYDrTGTRVINYIRGLVTYMPVFTILFFVFTLANTGI- 387
Cdd:PRK06525 310 YMFFGLslaiLGSRL-ALEGSIAYIFNHAFAKSLFFLVAGALSYS-CGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVp 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 388 PLSLNFL-------GEQLSLIGIWIQNPIIAALGATgiVLSACYSLFLFNRLSYGKLSPLLTPVKDLNRREYYLLISLII 460
Cdd:PRK06525 388 PFNGFFSkfpifaaGFELSVEYWILLPAMVLLLIES--VASFAWFLRWFGRVVFGEPSEAVADAAPLPGSMKLVLIVLIV 465
|
...
gi 1778127934 461 PTI 463
Cdd:PRK06525 466 MSL 468
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
204-413 |
2.50e-21 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 96.54 E-value: 2.50e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 204 SLDSQkLLWLGF---FLAFAVKTPLYPFIIWLPKAHADSPLAGSIILAATILKLATYGYLRVLINFLPDATNYF-NPLIQ 279
Cdd:PRK06458 207 LLDPT-LMKLAFvflLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFpGRLLL 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 280 TIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFICVGGIIYDrTGTRV 359
Cdd:PRK06458 286 IFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQK-YGTRD 364
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1778127934 360 INYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFLGEQLSLIGIWIQNPIIAAL 413
Cdd:PRK06458 365 INVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAI 418
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
133-424 |
4.07e-21 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 96.50 E-value: 4.07e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 133 DLLLFYVFFESV-LPILFIVIiiFGHGNDRFRSA-FLLFLYTLAGSLPMLLCILVIYSYIGSTDFQliSLYEISLdSQKL 210
Cdd:PRK06521 134 DAFSFLVAWETMsLSSWFLVI--ANHREAEIRRAgFLYLLMAHAGALAILLAFGLLARESGSYDFA--AMRAAHL-SPFW 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 211 LWLGFFLA---FAVKTPLYPFIIWLPKAHADSPLAGSIILAATILKLATYGYLRVLINFLPDATNYFNPLIQTI----AV 283
Cdd:PRK06521 209 ASLVFLLAlfgFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLGAPGWWWGVLVLALgaisAV 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 284 IAIIYAslstIIQQDTKRLIAYSSIAHMGVVVLGL-----FSNTIQ------GIEGAILLALAHGFVSPALFICVGGIIY 352
Cdd:PRK06521 289 LGVLYA----LAEHDLKRLLAYSTIENIGIIFVGLglamvFIAYGMpllaalALTAALYHLLNHALFKSLLFLGAGAVLH 364
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 353 dRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPlSLN------------FLGEQLSLIGIWIQNPIIAALGA-TGIV 419
Cdd:PRK06521 365 -ATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALP-PLNgfvsewlllqslLSSPGLPQWGLKLAVPIAAAMLAlTAAL 442
|
....*
gi 1778127934 420 LSACY 424
Cdd:PRK06521 443 AAMCF 447
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
5-476 |
6.62e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 95.55 E-value: 6.62e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 5 LILIPIIGSLLILLYpestdqgkNKHTLSIKQI-ALITSLINFFISLFIWYQFDSNTTQ-YQFVSE-------FNQLNF- 74
Cdd:PRK08376 10 LIIIPLFGAFSMPIV--------SLLGGKAREIwAVLISFLTLIVALLVFYEVWNNGTIvYVLGAEsptltlpFGSGGFp 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 75 CHLNFGVDGISLYFVLLTTFVTPIALLSNYANINKN--LKIFLVSFLLLESLQICAFVSLDLLLFYVFFEsVLPILFIVI 152
Cdd:PRK08376 82 IRIIWEVDLFGAFMALIATIVSFLAVLYSISYMKHDtgLDKYYTLILLLELGMLGMAITGDLFNFFVFLE-IMSIASYAL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 153 IIFGhgNDRFRSAFLLFLYTLAGSLP---MLLCILVIYSYIGSTDFQLISlYEISLDSQKL--LWLGFFLA-FAVKTPLY 226
Cdd:PRK08376 161 VAFR--NDTWEAIEAGIKYMFVGSLAssmVLLGIALLYGQYGTLNMAYLA-VKMSENPTVVakIALALFIAgLAMKSGAV 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 227 PFIIWLPKAHADSPLAGSIILAaTILKLATYGYLRVLINFLPDATNYFnpliqTIAVIAIIYASLSTII-------QQDT 299
Cdd:PRK08376 238 PVHMWLPDAYPAAPSSISAMLL-VIKQAGLYALARVLFSIYGPAINLA-----TVGWVIIILGCLTMFVgvamavvQKDV 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 300 KRLIAYSSIAHMGVVVLGL-----------FSNTIQ-GIEGAILLALAHGFVSPALFICVGGIIYdRTGTRVINYIRGLV 367
Cdd:PRK08376 312 KRLLAYHSVSQIGYMLLGLgvglaalgdpaMASYGEiALAGGIYHIVNHALYKALLFLTAGAVIY-ETGTRNLNELGGLA 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 368 TYMPVFTILFFVFTLANTGIPLSLNFLGEQLSLIGIWIQNPIIAALGATGIVLSACYSLFLFNRLSYGKLSPLLTPVKDL 447
Cdd:PRK08376 391 RTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVMNVKEP 470
|
490 500
....*....|....*....|....*....
gi 1778127934 448 NRREYYLLISLIIPTIAFGILPDVLLDSL 476
Cdd:PRK08376 471 PKPMLVPMLILAIAIIGMGLFPWQISDKL 499
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
81-474 |
4.05e-20 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 92.96 E-value: 4.05e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 81 VDGISLYFVLLTTFVTPIALLSNYANINKNLKIFLVSFLLLESLQICAFVS-LDLLLFYVFFESVLPILFIVIiifGHGN 159
Cdd:PRK05777 71 VDGFALFLKGLILLASLLALLLARPYLEDRGRGEFYLLVLFALLGMMVMVSaNDLLTLFLGLELLSLPLYALA---ALRR 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 160 DRFRS---AFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLYEISLDSQKLLW---LGFFLA-FAVKTPLYPFIIWL 232
Cdd:PRK05777 148 DRRRSleaAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALADGSGNSLLLlfgLVFLLVgLAFKLSAVPFHMWT 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 233 PKAH--ADSPLAGSIilaATILKLATYG-YLRVLINFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIA 309
Cdd:PRK05777 228 PDVYegAPTPVTAFL---ATAPKIAAFAvLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 310 HMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFICVGGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPL 389
Cdd:PRK05777 305 HAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPP 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 390 SLNFLGEQLSLIGIWIQNPI-IAALGATGIVLSACYSLFLFnRLSYGKLSPLLTPVKDLNRREYYLLISLIIPTIAFGIL 468
Cdd:PRK05777 385 TAGFWGKFYVFEAAVEAGLWwLAVIGVLNSAIGAFYYLRVI-KLMYFDEPPRDAPVNWPLSAGGAVLSVSALLVLVLGIF 463
|
....*.
gi 1778127934 469 PDVLLD 474
Cdd:PRK05777 464 PQPLLD 469
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
78-403 |
8.78e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 88.86 E-value: 8.78e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 78 NFGV----DGISLYFVLLTTFVTPIALLSNyanINKNLKIFLVSFLLLESLQI-CAFVSLDLLLFYVFFEsVLPILFIVI 152
Cdd:PRK07234 58 NFGVtlraDALSGYFILTNALVTLAVIFYC---WESAKTRFFYAQLLILHGSVnAAFVCADLISLYVALE-VLSIATFLL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 153 IIFGHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQliSLYEISLDSQKLLwlgfFLAFAVKTPLYPFIIWL 232
Cdd:PRK07234 134 VAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFS--GLATADPEAFALI----ALGLLVKGGIFVSGLWL 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 233 PKAHADSPLAGSIILAATILKLATYGYLRV-LINFLPDatnyfnPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHM 311
Cdd:PRK07234 208 PLTHSEAEPPVSALLSGVVVKAGVFPLVRCaLDVPGLD------LIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQL 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 312 GVVVLGlfsntiqGIEGAiLLALAHGFVSPALFICVgGIIYDRTGTRVINYIRGLVTYMPvftILFFVFTLAntGIPLSL 391
Cdd:PRK07234 282 GFILAA-------PLVGG-LYALAHGLVKSTLFLCA-GALPSRNFTELISQMLGIGKWIP---LTMASFSIA--GFPLLA 347
|
330
....*....|..
gi 1778127934 392 NFLGEQLSLIGI 403
Cdd:PRK07234 348 GFVSKVLTLKNL 359
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-394 |
1.12e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 88.64 E-value: 1.12e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 6 ILIPIIGSLLILLYpestdqgkNKHTLSiKQIALITSLINFFISLFIWYQFDSNTTQYQFVSEFNQLNFCHLNfgVDGIS 85
Cdd:PRK12662 10 VIIPLLSAVVCALL--------KNRKLV-KIISCIVVAVSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELR--VDILS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 86 LYFVLLTTFVTPIALL----SNYANINKNLKI-FLVSFLLLESLQICAFVSLDLLLFYVFFEsVLPILFIVIIIFGHGND 160
Cdd:PRK12662 79 ATMLVLVNFIAVMSVLygiyPNRKEISVNKIPsFYSAFLLCLGGLLGILVSNDVFNIYVFLE-ISSISSYVLVAMGRDKK 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 161 RFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLYEISLDSQKLLWLG---FFLAFAVKTPLYPFIIWLPKAHA 237
Cdd:PRK12662 158 ALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGvlfIMVGLFIKAALFPFHKWLIQAYS 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 238 DSPLAGSIILAATILKLATYGYLRVLINF----LPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGV 313
Cdd:PRK12662 238 EAPSFISVFFSGTSTKVMIYLIIRIVYDVfkanFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGY 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 314 VVLGLFSNTIQGIEGAILLALAHGFVSPALFICVGGIIYDRTGTRVINYIrGLVTYMPVFTILFFVFTLANTGIPLSLNF 393
Cdd:PRK12662 318 IILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCL-NLWKSMPKITLAFVLLSLSLIGMPPTSGF 396
|
.
gi 1778127934 394 L 394
Cdd:PRK12662 397 V 397
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
79-405 |
1.46e-17 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 85.19 E-value: 1.46e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 79 FGVDGISLYFVLLTTFVTPIA----------LLSNYANINKNLKIFLVSFLLLESLQICAFVSLDLLLFYVFFE--SVLP 146
Cdd:PRK08676 59 LFIDHLGIFVVLIASVVFILAalyargyvdhLLSNGELDPENLKVFYLGFNLLLSVITFAFFSDNLALFWIFAEltTVFS 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 147 ILFIVIIIFGHGNDrfrsAFLLFLYTLAGSLpmllcilvIYSYIGstdfqLISLYEIS---LDSQKLLW----------- 212
Cdd:PRK08676 139 AMLIAILSARENID----AALKYIFIASTAM--------IFAFIG-----LIFLFSLTrqaLGTGTLNWtelaahaslls 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 213 --------LGFFLAFAVKTPLYPFIIWLPKAHADSPLAGSIILAATILKLATYGYLRVL-INFLPDATNYFNPLIQTIAV 283
Cdd:PRK08676 202 psvlgasfLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSaLLRQSGAAEQFSNVLIGLGI 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 284 IAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFICvGGIIYDRTGTRVINYI 363
Cdd:PRK08676 282 FSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFS-AGILHRQYRSDRFDRI 360
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1778127934 364 RGLVTYMPVFTILFFVFTLANTGIPLSLNFLGE-----QLSLIGIWI 405
Cdd:PRK08676 361 FDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKffillQLGGISVWL 407
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
216-389 |
3.04e-16 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 80.97 E-value: 3.04e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 216 FLAFAVKTPLYPFIIWLPKAHADSPLAGSIILAATILKLATYGYLRVL-INFLPDATNYFNPLIQTIAVIAIIYASLSTI 294
Cdd:PRK08377 213 IFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILyLMQNANGWSSVLKLVIIMATLTVFFAELSAL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 295 IQQDTKRLIAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFICVGGIIYDRTGTRVINYiRGLVTYMPVFT 374
Cdd:PRK08377 293 RQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKF-EGLGKRMPLTA 371
|
170
....*....|....*
gi 1778127934 375 ILFFVFTLANTGIPL 389
Cdd:PRK08377 372 LALTIGALSTVGIPL 386
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
34-467 |
1.03e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 79.48 E-value: 1.03e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 34 IKQIALITSLINFF--ISLFIWYQFDSNTTQYQFVSEFNqlnfCHLNFGVDGISLYFVLLTTFVTPIALLSNYANINKNL 111
Cdd:PRK06589 36 IRNFLLITISIFFFgnILLIDLLFLKGIRAQFELMDFGN----YSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINN 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 112 KI----FLVSFLLLESLQICAFVSLDLLLFYVFFESVLPILFIVIIIFGHGNDRFRSAFLLFLYTLAGSLPMLLCILVIY 187
Cdd:PRK06589 112 IDsssrFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIY 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 188 SYIGSTDFQLISLYEISldsQKLLWLGFFLAFAVKTPLYPFIIWLPKAHADSPLAGSIILAATILKLATYGYLRVL---- 263
Cdd:PRK06589 192 TKTGNLDFVSGGLFSKN---QSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILlyif 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 264 -INFLPDATNYFNPLIqTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPA 342
Cdd:PRK06589 269 gLSYLQRIFAEFNWLI-FIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKIC 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 343 LFICVGGiIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFLGEQLSLIGIWIQNPIIAAL--GATGIVL 420
Cdd:PRK06589 348 LFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIivMLVVIAS 426
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1778127934 421 SACYSLFLFNRLSYGKLSPLLTPVKDLNRREYYLLISLIIPTIAFGI 467
Cdd:PRK06589 427 SILSALYLLKILSSIYKPSLSENSFITKSLPYLMQISVITCCCALTL 473
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
133-389 |
1.20e-14 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 76.47 E-value: 1.20e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 133 DLLLFYVFFEsvLPILFIVIIIFGHGNDR-FRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLYEISLDsqkll 211
Cdd:PRK12668 114 DLLTLFVFWE--LMAFTSTFLVWARGTKAaVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGTAA----- 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 212 WLgFFLAFAVKTPLYPFIIWLPKAHADSPLAGSIILAATILKLATYGYLRVlinflpdatnyF--NPLIQTIAVIAIIYA 289
Cdd:PRK12668 187 WL-ILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARA-----------FpgTELLIYIGAAMAVYG 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 290 SLSTIIQQDTKRLIAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFICVGGIIYdRTGTRVINYIRGLVTY 369
Cdd:PRK12668 255 VFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLFMSAGAVLY-RTGTEKLTELGGLYRS 333
|
250 260
....*....|....*....|
gi 1778127934 370 MPVFTILFFVFTLANTGIPL 389
Cdd:PRK12668 334 MPLTALFCLVGALSISAFPL 353
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
77-460 |
6.61e-14 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 74.41 E-value: 6.61e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 77 LNFGVDGISLYFVLLTTFVTPIALLSNYANINK---NLKIFLVSFLLLESLQICAFVSLDLLLFYVFFESVLPILFIVII 153
Cdd:PRK12646 72 LDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSrkdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLIS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 154 IFGHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLYEISLDSQKL---LWLGFFLAFAVKTPLYPFII 230
Cdd:PRK12646 152 YWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHGLfipMIFMFLLGAFTKSAQFPFHI 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 231 WLPKAHADSPLAGSIILAATILKLATYgylrVLINFLP--DATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSI 308
Cdd:PRK12646 232 WLPRAMAAPTPVSAYLHSATMVKAGIF----LLFRFTPllGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 309 AHMGVVV--LGLFSNTIQGIEGA-------ILLALAHGFVSPALFICV----GGIIYDRTGTRVINYIRGLVTYMPVFTI 375
Cdd:PRK12646 308 SQLGMIMamVGIGGGYAQHQQDAiasiyvfVLFAALFHLMNHAIFKCAlfmgVGIIDHEAGTRDIRILSGMRQLFPKMNL 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 376 LFFVFTLANTGIPLSLNFLGEQLSLIGI----------WIQNPIIAALGATGIVLSACYSLFLFNRLSYGKLSPLLTPVK 445
Cdd:PRK12646 388 VMTIAALSMAGVPFLNGFLSKEMFLDALtqtgqlsqfsLISMIIIVFIGVIASIFTFTYALYMVKEVFWGKYDSKVFTKK 467
|
410
....*....|....*
gi 1778127934 446 DLNRREYYLLISLII 460
Cdd:PRK12646 468 NIHEPWLFSLPSLIL 482
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
7-395 |
1.20e-13 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 72.67 E-value: 1.20e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 7 LIPIIGSLLILLYPESTDQGKNKHTLSIkqIALITSLINFFISLFIWYQFDSNTtqyqfvseFNQLNFCHLNFGVDGISL 86
Cdd:TIGR01770 8 IILLLGAFILLLYGLFYSRKKRNPLLLK--NLSYIVLLSALVSLFLTLQYAAYL--------FTGFSFFIVDNFALLIKL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 87 YFVLLTTFVTPIALLSNYANINKNLKIFLVSFLLLESLQICAFvSLDLLLFYVFFESVLPILFIVIIIFGHGNDRFRSAF 166
Cdd:TIGR01770 78 ILLLSTLLTFFFALSYLSKEKINKFEFYILLLFALLGIFLLVS-SNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 167 LLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLYEISL---DSQKLLWLGFFL-AFAVKTPLYPFIIWLPKAHADSPLA 242
Cdd:TIGR01770 157 KYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGmlnISLLLLGIVLILvGLLFKLSAVPFHMWVPDVYEGAPTP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 243 GSIILAATILKLATYGYLRVLINFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVLGLFSNT 322
Cdd:TIGR01770 237 VTAFFSIVPKIAIFAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGT 316
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1778127934 323 IQGIEGAILLALAHGFVSPALFICVGGI-IYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFLG 395
Cdd:TIGR01770 317 LEGIKAVLFYIFIYALMSLGAFGVLSLLrSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFG 390
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
76-422 |
2.40e-13 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 72.64 E-value: 2.40e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 76 HLNFGVDGISLYFVLLTTFV-TPIALL-SNYANINKNLKIFLVSFLLLESLQICAFVSLDLLLFYVFFEsVLPILFIVII 153
Cdd:PRK12647 57 NLSFLLDGLSLTFALLITGIgTLIVLYaGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWE-LTSITSFLLI 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 154 IFGHGNDRFR-SAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLYEISLDSQKLLWLGFFLAFA---VKTPLYPFI 229
Cdd:PRK12647 136 GFNHEREAARrAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLASGDVIREHPLYLAILLLVLGgafTKSAQFPFH 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 230 IWLPKAHAdSPLAGSIIL-AATILKLATYGYLRvlINFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSI 308
Cdd:PRK12647 216 FWLPNAME-APTPVSAYLhSATMVKAGIYLLAR--LNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTV 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 309 AHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFIcVGGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIP 388
Cdd:PRK12647 293 SALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFM-VAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLP 371
|
330 340 350
....*....|....*....|....*....|....
gi 1778127934 389 LSLNFLGEQLSLIGIwIQNPIIAALGATGIVLSA 422
Cdd:PRK12647 372 PLFGFLAKELIYEAL-LEAPLWSLILTVAAVLGN 404
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
79-396 |
3.63e-13 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 71.11 E-value: 3.63e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 79 FGVDGISLYFVLLTTFVTpIALLSNYANINKNLKIFLVSFLLLESlqICAFVSLDLLLFYVFFE-SVLPILFIvIIIFGH 157
Cdd:MTH00062 41 FIFDSLSFYLILLVLFLG-LYSQVMFYNLLSGVSRFFLFLSLIFS--ILCFCVNNSLLFWFFYElSIIPLLYL-LFSESP 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 158 GNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFqliSLYEISLDSQKLLWLGFFLAFAVKTPLYPFIIWLPKAHA 237
Cdd:MTH00062 117 YSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNF---SDWGSDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHA 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 238 DSPLAGSIILAATILKLATYGYLRVLINFLPDATNYFNPLIQTIAVIAIIYASlstiIQQDTKRLIAYSSIAHMGVVVLG 317
Cdd:MTH00062 194 EASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVFFLITAC----SELDGKRWLAFLSLSHILVPVLG 269
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1778127934 318 LFSNTIQGIEGAILLALAHGFvSPALFICVGGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFLGE 396
Cdd:MTH00062 270 LFVGDWSSINLSFFYCLGHGL-SAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCE 347
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
76-429 |
1.39e-12 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 70.07 E-value: 1.39e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 76 HLNFGVDGISLYFVLLTTFVTPIALLSNYANINKNLKIflVSFLLLESLQICAFVSL----DLLLFYVFFESVLPILFIV 151
Cdd:PRK12650 72 NLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGN--TSFYLLMTAFMAAMLLLvladDVVVLFVAWELVSLASFFL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 152 IIIFG-HGNDrfrSAFLLFLYTLAGSLPMLLCILVIYSYIGSTdfqliSLYEI------SLDSQKLLWLGFFLAFAV--K 222
Cdd:PRK12650 150 IARSGsGGEA---GSIRTLILTFFGGLTLLAAVAIAATQTGTT-----SLSGIlhsdvwAEKPGLTTVVAVLIAVAAftK 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 223 TPLYPFIIWLPKAH-ADSPLAgSIILAATILKLATYGYLRVLINFLPDATnyFNPLIQTIAVIAIIYASLSTIIQQDTKR 301
Cdd:PRK12650 222 SAQFPFHFWLPEAMaAITPVS-AFLHAAAVVKAGIYLLLRFSPVFHDVAV--WNWLLIIVGMITALMGAVFAVQKTDLKK 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 302 LIAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFICVgGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFT 381
Cdd:PRK12650 299 LTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLI-GVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAA 377
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1778127934 382 LANTGIPLSLNFLGEQlSLIGIWIQNPIIAALGATGIVLSACYSLFLF 429
Cdd:PRK12650 378 LSMAAVPPLFGFVSKE-GMLTAFLEAPGGNAGVVLLLVGAALGAVFTF 424
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
175-396 |
1.01e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 64.08 E-value: 1.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 175 GSLPMLLCILVIYSYIGSTDFQLISLYEISLDSQKLLWLGFFLAFAVKTPLYPFIIWLPKAHADSPLAGSIILAATILKL 254
Cdd:PRK08042 146 GTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKI 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 255 ATYGYLRV-LINFLPDAtnYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVLGLFSNTI---------- 323
Cdd:PRK08042 226 GLLGILTLsLLGGNAPL--WWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTgialeqpali 303
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1778127934 324 -QGIEGAILLALAHGFVSPALFICVGGIIYdRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFLGE 396
Cdd:PRK08042 304 aLGLVGGLYHLLNHSLFKSVLFLGAGSVWF-RTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGE 376
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
130-476 |
2.04e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 59.94 E-value: 2.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 130 VSLDLLLFYVFFE--SVLPILFIviiifGHGNDRF---RSAFLLFLYTLAGSLPMLLCILVIYSYIGSTdfqLISLYEIS 204
Cdd:PRK12644 124 TSDNLLLLYVFWEltTVLSFLLI-----GHYAERAasrRAALQALLVTTAGGLAMLVGIIILGQAAGTY---RLSELLAD 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 205 LDSQKLLWLGFFLAFA---VKTPLYPFIIWLPKAHAdSPLAGSIIL-AATILKLATYGYLRvlinFLPDA--TNYFNPLI 278
Cdd:PRK12644 196 PPTGPAVSVAVVLILVgalSKSAIVPFHFWLPGAMA-APTPVSAYLhAAAMVKAGIYLVAR----LAPGFadVPVWRPTV 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 279 QTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMG--VVVLGLfsNTIQGIEGAILLALAHGFVSPALFICVGgIIYDRTG 356
Cdd:PRK12644 271 LVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGflTVLVGI--GTRDAALAGLAMLLAHALFKAALFLVVG-IIDHSTG 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 357 TRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFLGEQLSLIGIW------IQNPIIAALGATGIVLSACYSL-FLF 429
Cdd:PRK12644 348 TRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLhdgalgPAGPVVLAGIVLGSILTVAYSLrFLW 427
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1778127934 430 NRLSYGKLSPLLTPVKDLNRREYYLLIS---LIIPTIAFGILPdVLLDSL 476
Cdd:PRK12644 428 GAFARKPGAFPSVAVTEMHRPSPLFLAPpavLAVLGLVLGLLP-APLDAL 476
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
5-426 |
5.24e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 58.66 E-value: 5.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 5 LILIPIIGSLLILLYPEStdqGKNKHTLSIKQIALITslinfFISLFIWYQ--FDSNTTQYQF--VSEFNqLNFchlNFG 80
Cdd:PRK12648 6 LVLLPFLGALLAALLPRN---ARNAEAWLAGLVALAA-----LVLLALLYPavAAGEVIRAEIewLPALG-LNL---SLR 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 81 VDGISLYFVLLttfVTPIALL-----SNYANINKNLKIFLVSFLLLESLQICAFVSLDLLLFYVFFE--SVLPilFIVII 153
Cdd:PRK12648 74 LDGLAWLFALL---ILGIGLLvvlyaRYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWEltSLSS--FLLIG 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 154 IFGHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLI----------SLYEISLdsqKLLWLGFFlafaVKT 223
Cdd:PRK12648 149 YWHHRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVVlaagdlirahPLYPPAL---VLILLGAF----TKS 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 224 PLYPFIIWLPKAHAdSPLAGSIIL-AATILKLATYgylrVLINFLP--DATNYFNPLIQTIAVIAIIYASLSTIIQQDTK 300
Cdd:PRK12648 222 AQFPFHFWLPHAMA-APTPVSAYLhSATMVKAGVF----LLARLWPvlAGTEEWFWIVGGAGLITLLLGAYFALFQHDLK 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 301 RLIAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFIcVGGIIYDRTGTRVINYIRGLVTYMPVFTILFFVF 380
Cdd:PRK12648 297 GLLAYSTISHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFM-AAGIIDHETGTRDMRRLSGLRRLMPITATLAMVA 375
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1778127934 381 TLANTGIPLsLN-------FLGE---QLSLIGIWIQNPIIAALGAtgiVLSACYSL 426
Cdd:PRK12648 376 AAAMAGVPL-LNgflskemFFAEtldTHLLGSLDWLLPVAATLAG---AFSVAYSL 427
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
130-388 |
2.44e-08 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 56.57 E-value: 2.44e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 130 VSLDLLLFYVFFESVLPILFIVIiifGHGNDRFRSAFLL---FLYTLAGSLPMLLCILVIYSYIGSTDFQLIS--LYEIS 204
Cdd:PRK07376 140 ISPNLVQIYVFWELVGMCSYLLV---GFWYDRKGAADAAqkaFVVNRVGDFGLLLGILGLFWATGSFDFDGIAdrLSELV 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 205 LDSQKLLWLGFFLAFAV------KTPLYPFIIWLPKAHADSPLAGSIILAATILKLATYgylrvLINFLPDATNYFNPLI 278
Cdd:PRK07376 217 SSGAVSGWLALLLCILVflgpmaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVF-----LVARMYPVFEQFPAVM 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 279 QTIAVIAIIYASLSTII---QQDTKRLIAYSSIAHMGVVVLGLFSntiqGIEGAILLAL-AHGFVSPALFICVGGIIY-- 352
Cdd:PRK07376 292 TVIAWTGAITAFLGASIaltQNDIKKGLAYSTISQLGYMVMAMGC----GAYSAGLFHLmTHAYFKAMLFLGSGSVIHgm 367
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1778127934 353 ------DRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIP 388
Cdd:PRK07376 368 eevvghDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIP 409
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
81-476 |
6.01e-08 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 55.32 E-value: 6.01e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 81 VDGISLYFVLLTTFV-TPIALLSNY--ANINKNLKIFLVSFLLLESLQICAFVSLDLLLFYVFFEsVLPILFIVIIIFGH 157
Cdd:PRK12645 76 VDGLSLLFALLITGIgSLVVLYSIYylSKKKEQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWE-LTSISSFLLISYWY 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 158 GNDRFRS-AFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQ-------LISLYEISLDSQKLLWLGFFlafaVKTPLYPFI 229
Cdd:PRK12645 155 EREASRYgAQKSMLITVFGGLSMLGGFILLYIMTGSFSIRemianadEIQNSPLFIPAMILILLGAF----TKSAQFPFY 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 230 IWLPKAhADSPLAGSIIL-AATILKLATYGYLRVLINFLPDATNYFnpLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSI 308
Cdd:PRK12645 231 IWLPDA-MEAPTPVSAYLhSATMVKAGIYLVARFTPIFAGSQVWFW--TVTLVGLITLFWGSLNAVKQTDLKGILAFSTV 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 309 AHMGVVV--LGLFSNT-----------IQGIEGAILLALAHGFVSPALFICVgGIIYDRTGTRVINYIRGLVTYMPV-FT 374
Cdd:PRK12645 308 SQLGLIMslLGIGAASlhyqgddskiyAAAITAAIFHLINHATFKGSLFMIV-GIVDHETGTRDIRKLGGLMTIMPItFT 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 375 ILfFVFTLANTGIPLSLNFLGEQL--------------SLIGIWIQNPIIAALGAtgiVLSACYSLFLFNRLSYGKLSPL 440
Cdd:PRK12645 387 IA-LIGALSMAGLPPFNGFLSKEMffesmlnateanlfSLDTWGVLFPVIAWVAS---VFTFVYSIIFIFKTFFGKYKPE 462
|
410 420 430
....*....|....*....|....*....|....*....
gi 1778127934 441 LTPVKdLNRREYYLLIS---LIIPTIAFGILPDVLLDSL 476
Cdd:PRK12645 463 QLPKK-AHEAPIGMLISpiiLASLVVVFGLFPNILTNSI 500
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
217-348 |
2.81e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 52.87 E-value: 2.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 217 LAFAVKTPLYPFII--WLPKAHADSPLAGSIILAATILKLATYGYLRVLINFLPDATNYFNPLIQTIAVIAIIYASLSTI 294
Cdd:PRK06459 166 FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFGLTILAIGAFSILFGALYAY 245
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1778127934 295 IQQDTKRLIAYSSIAHMGV--VVLGLF---SNTIQGIEGAILLAL-----AHGFVSPALFICVG 348
Cdd:PRK06459 246 VSENVKGLLAFSTIENNGAilVALGLYmvtKQLITSIEHFSLITVilysfAHSVAKTGLFLSSG 309
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
281-413 |
4.00e-07 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 52.60 E-value: 4.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 281 IAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVLGLfsnTIQGIEGAILLALAHGFVSPALFICVGGIIYdRTGTRVI 360
Cdd:PRK07390 290 IGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAV---GLQQPDIALLLLLTHAIAKALLFMSVGSIIL-TTITQDL 365
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1778127934 361 NYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFLGEQLSLIGIWIQNPIIAAL 413
Cdd:PRK07390 366 TELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSPWLVGV 418
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
88-388 |
5.52e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 51.96 E-value: 5.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 88 FVLLTTFVTPIALLSNYANINKNLKIFLVSFLLLESlqICAFV-SLDLLLFYVFFEsVLPILFIVIIIFGHGNDRFRSAF 166
Cdd:PRK06277 77 IIFVLSLIASLVLITGLGEKKSSGLYVFLMLMGLAS--VSAIVlADDIFNLYVFFE-IAAIVQVGLVIASGTEEAYKAAL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 167 -LLFLYTLAGSLpMLLCILVIYSYIGSTDFQLISLYEISLDSQKLLWLGFFLAF---AVKTPLYPFIIWLPKAHADSPLA 242
Cdd:PRK06277 154 kYMILGNVAGSI-LLLGIGFLLASTGTLNITDIHNALLVNPTSPVIYGGLLLLIfglLYGSGLPPFHTIKSDIYAKAKPF 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 243 GSIILAA-TILKLATYGYLRVLINFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVLGLFSN 321
Cdd:PRK06277 233 GSALLQTfSKFVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALG 312
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1778127934 322 TIQGIEGAILLALAHGFVSPALFICVgGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIP 388
Cdd:PRK06277 313 TPLGIVAGIFHAINHVIYKSALFLGA-GIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVP 378
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
260-395 |
8.82e-07 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 51.21 E-value: 8.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 260 LRVLINFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFV 339
Cdd:PRK02504 261 IRLLVTAFPSFDEQWKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTEAGYASMVFYLLAYLFM 340
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1778127934 340 SPALFICVggIIYD-RTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFLG 395
Cdd:PRK02504 341 NLGAFACV--ILFSlRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFG 395
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
77-436 |
2.64e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 50.21 E-value: 2.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 77 LNFGVDGISLYFVLLTTFVTPIAL-LSN-YANINKNLKIFLVSFLLLESLQICAFVSLDLLLFYVFFESVLPILFIVIII 154
Cdd:PRK12649 74 FSIYADGLAVLIGLIASGIGVIIMsYSNgYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGY 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 155 FGHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLYEISLDSQK------LLWLGFFLAFAVKTPLYPF 228
Cdd:PRK12649 154 WRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKghplflITLILIFIGAAAKSAQGPF 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 229 IIWLPKAHADSPLAGSIILAATILKLATYGYLRVLINFlpDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSI 308
Cdd:PRK12649 234 YIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIF--SGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTI 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 309 AHMGVVVLGLFSNTIQ----GIEGAILLALAHGFVSPALFIcVGGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLAN 384
Cdd:PRK12649 312 SQLAYLMTMYGYTTYHepglGVAAATFHLLNHATFKACLFL-VAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAM 390
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 385 TGIPLSLNFLGEQLSL-----IGIWIQNP---IIAALGATGIVLSACYSLFLFNRLSYGK 436
Cdd:PRK12649 391 AGIPPLNGFLSKEMFYetsveMGALIGGPftiIIPAVAVLGGVFTFAYSIKLIDGIFLGE 450
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
213-388 |
5.05e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 48.99 E-value: 5.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 213 LGFFLAFAVKTPLYPFIIWLPKAHADSPLAGSIILAATilkLATYGYLrVLINFLP--DATNYFNPLIQTIAVIAIIYAS 290
Cdd:MTH00207 183 LSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSST---LVTAGVF-LLIRFYPflSSTYWFNPALLLTASLTMLMAG 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 291 LSTIIQQDTKRLIAYSSIAHMGVVV--LGLFSNTIqgiegAILLALAHGFVSPALFICVGGIIYDRTGTRVINYIRGLVT 368
Cdd:MTH00207 259 LSAMTECDMKKIIALSTLSQLGVMMasLGLGMPKL-----ALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTN 333
|
170 180
....*....|....*....|
gi 1778127934 369 YMPVFTILFFVFTLANTGIP 388
Cdd:MTH00207 334 QMPLTTSCLLIANLALCGSP 353
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
168-485 |
8.19e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 47.72 E-value: 8.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 168 LFLYTLAgslpmLLCILVIYSYIGSTDFQLISLYEISLDSQKLLWLGFFLAFAVKTPLYPFIIWLPKAHADSPLAgSIIL 247
Cdd:MTH00196 59 LFLFGCA-----LLCGTTGGLHLSYINLVLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTK-TTAL 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 248 AATILKLatyGYLRVLINFLPDATnyfnpLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVLGLFSNTIQGIE 327
Cdd:MTH00196 133 LAIVPKL---GIFSILVSIGLNVN-----ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQ 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 328 GAILLALAHGFVSPALFICVggIIYDRTGTRVINYiRGLVTYMPVFTILFFVFTLANTGIPLSLNFLGEQLSLIGIWIQN 407
Cdd:MTH00196 205 ASLVYLFIYIIMSICVFSII--LALNVYKNLIIEF-SGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQ 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 408 PIIAALGATGI-VLSACYSLFLFNRLSYGKLSPLLTPVKDLNRREY-----YLLISLIIPTIAFGILPDVLLDSLHTSVS 481
Cdd:MTH00196 282 YYLIFLLAVFCsVIAGVYYVRIVKILFFQANSFLLISTKILKKENKinlrkALLIGFSLYLILFTILSPNFFFQLAHWAI 361
|
....
gi 1778127934 482 ALLF 485
Cdd:MTH00196 362 GGLF 365
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
128-395 |
1.22e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 47.54 E-value: 1.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 128 AFVSLDLLLFYVFFEsVLPILFIVIIIFGHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLIS--LYEISL 205
Cdd:PRK12666 125 AFLTGDLFNLFVFFE-VLLAASYGLLLHGSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAqrIAQLPA 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 206 DSQKLLWLG---FFLAFAVKTPLYPFIIWLPKAHAdsplAGSIILAA--TIL-KLATYGYLRV-LINFLPDA---TNYFN 275
Cdd:PRK12666 204 ADRALLEAGaalLLVVFLIKAAMWPLNFWLPPAYA----AASAPVAAlfAIMtKVGIYAILRLsTLLFGPEAgasAGFGQ 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 276 PLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALFICVGGIiyDRT 355
Cdd:PRK12666 280 DWLLPGGLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADLV--ERQ 357
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1778127934 356 GTRVINyirGLVTYMPVFTILFFVFTLANTGIPLSLNFLG 395
Cdd:PRK12666 358 RGAAAD---RLAVTPELYDLDEEEEEEVGVAIPATMALLG 394
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
76-400 |
1.53e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 47.65 E-value: 1.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 76 HLNFGVDGISLYFVLLTTFVTPIALL--SNYANINKNLKIFLVSFLLLESLQICAFVSLDLLLFYVFFESVLPILFIVII 153
Cdd:MTH00032 73 HIGLLYDTLSVTMLLVISSISTLVHIysTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVA 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 154 IFGHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFqliSLYEISLDSQKLLWLGFFLAFAVKTPLYPFII--- 230
Cdd:MTH00032 153 FWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDF---LTFNGGSVGSGIMDRGYYGGGAYESPLAPFAIigi 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 231 -----------------WLPKAHADSPLAGSIILAATILklaTYGYLRVLINFLPDATNYFNPLIQTI-AVIAIIYASLS 292
Cdd:MTH00032 230 llligcigksaqlglhtWLPDAMEGPTPVSALIHAATMV---TAGVFLMIRSFPLFEKAPLTLLIITIfGALTAFFAATV 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 293 TIIQQDTKRLIAYSSIAHMGVVVLglfsntIQGIEGAILLAL----AHGFVSPALFICVGGIIYDRT-GTRVINYIRGLV 367
Cdd:MTH00032 307 GLVQNDLKKVIAYSTCSQLGYMVL------IIGIEGSHNVGLfhlvNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLI 380
|
330 340 350
....*....|....*....|....*....|...
gi 1778127934 368 TYMPVFTILFFVFTLANTGIPLSLNFLGEQLSL 400
Cdd:MTH00032 381 HSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
203-432 |
2.03e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 47.16 E-value: 2.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 203 ISLDSQKLLWLGFFLAFAVKTPLYPFIIWLPKAHADSPLAgSIILAATILKLATYGYLRVLInflpdatnYFNPLIQTIA 282
Cdd:MTH00198 293 IELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTP-TTALIAIIPKFTVYILLTSLV--------ITSKLLLSVA 363
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 283 VIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSPALF--ICV----GGIIYDRTG 356
Cdd:MTH00198 364 IISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALASFtvICTleefGTRTPTSRQ 443
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 357 TRVINYIRGLVTYMPVFTIL-----FFVFTLAN-----TGIPLSLNFLGEQLSLIG----IWIQNPIIAALGATGIVLSA 422
Cdd:MTH00198 444 RDGSFGNYNLVRRLVDLTILsrgqpYIAFSLAIvflslAGIPPLLGFLGKWFILVGsikiAFSSSLSIYYLVALFAIICT 523
|
250
....*....|
gi 1778127934 423 CYSLFLFNRL 432
Cdd:MTH00198 524 CISAFYYIRI 533
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
199-388 |
2.22e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 46.95 E-value: 2.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 199 SLYEISLDSQKLLWLGFF--LAFAVKTPLYPFIIWLPKAHADSPLAGSIILAATILKLATYgylrVLINFLPDATNY--F 274
Cdd:MTH00209 163 NIFYLNFNSNLGSVISVLivLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVY----LLIRFFPSLFSSpfF 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 275 NPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVvlgLFSNTIQGIEGAILLALAHGFVSPALFICVGGIIYDR 354
Cdd:MTH00209 239 SMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLM---MCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSH 315
|
170 180 190
....*....|....*....|....*....|....
gi 1778127934 355 TGTRVINYIRGLVTYMPVFTILFFVFTLANTGIP 388
Cdd:MTH00209 316 GHSQDIRMVGNLWYQMPITSICLNIANLSLCGIP 349
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
215-435 |
2.25e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 43.42 E-value: 2.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 215 FFLAFAVKTPLYPFIIWLPKAHADSPLAGSIILAaTILKLATygyLRVLINFLPDATNYFnplIQTIAVIAIIYASLSTI 294
Cdd:MTH00200 98 ILLALALKLGLAPGHFWVPDVLQGLSLQTGLILS-TWQKLAP---FALLIQLAPALNSNI---LLLLGLLSVLVGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 295 IQQDTKRLIAYSSIAHMGVVVLGLFSNTIqgieGAILLALAHGFVSPALFicvggIIYDRTGTRVINYIRGLVTYMPVFT 374
Cdd:MTH00200 171 NQTQLRKILAYSSIAHLGWLLSGLVYSPN----LALLYLLLYVIITLTVF-----LLLNLLNSTKINSLSSSKTKNPILS 241
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1778127934 375 ILFFVFTLANTGIPLSLNFLGEQLSLIGIWIQNPIIAalgATGIVLSACYSLFLFNRLSYG 435
Cdd:MTH00200 242 MLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIY---ATILLLGSLLSLFFYLRLSYL 299
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
169-389 |
4.23e-04 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 42.84 E-value: 4.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 169 FLYTLAGSLPMLLCILVIYSYIGSTDFQLI---SLYEISLDSQKLLWLGFFLAFAV--KTPLYPFIIWLPKAhadspLAG 243
Cdd:PRK06590 172 FIVNRVGDVGLALGIFLLFAEFGSLNYDEVfaaAPQFFGLGWSALTLICLLLFIGAmgKSAQFPLHTWLPDA-----MEG 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 244 -----SIILAATILklaTYG-YLRVLINFLPDATnyfnPLIQTI-----AVIAIIYASLStIIQQDTKRLIAYSSIAHMG 312
Cdd:PRK06590 247 ptpvsALIHAATMV---TAGvYLVARMSPLFELS----PEALLFvaivgAVTALFAAFIG-LVQTDIKRVLAYSTMSQLG 318
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1778127934 313 --VVVLGLfsntiQGIEGAILLALAHGFVSPALFICVGGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPL 389
Cdd:PRK06590 319 ymFLALGV-----GAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPP 392
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
183-388 |
1.18e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 41.37 E-value: 1.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 183 ILVIYSYIGSTDFQLISLYEISLdsqkLLWLGFFLAFA--VKTPLYPFIIWLPKAHADSPLAGSIILAATilkLATYG-Y 259
Cdd:MTH00151 152 LLSIALLVLLGHWSILSMWDFKL----SGWLGLLLVLAamTKSAQIPFSSWLPAAMAAPTPVSALVHSST---LVTAGvF 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 260 LrvLINFLP--DATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVV--LGLfsntiqgieGAILLAL- 334
Cdd:MTH00151 225 L--LIRFFPflSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMfsLGL---------GMPSLALf 293
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1778127934 335 ---AHGFVSPALFICVGGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIP 388
Cdd:MTH00151 294 hlyTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAP 350
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
220-395 |
1.24e-03 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 41.14 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 220 AVKTPLYPFIIWLPKAHADSPLAG----SIILAATILKLATygylRVLINFLPDATNYFNPLIQTIAVIAIIYASLSTII 295
Cdd:CHL00049 225 GFKLSLAPFHQWTPDVYEGSPTPVvaflSVTSKVAASALAT----RIFDIPFYFSSNEWHLLLEILAILSMILGNLIAIT 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 296 QQDTKRLIAYSSIAHMGVVVLGLFS-NTIQGIEGAILLALAHGFVSPALFICVggIIYD-RTGTRVINYIRGLVTYMPVF 373
Cdd:CHL00049 301 QTSMKRMLAYSSIGQIGYVIIGIIVgDSNDGYASMITYMLFYIFMNLGTFACI--VLFGlRTGTDNIRDYAGLYTKDPFL 378
|
170 180
....*....|....*....|..
gi 1778127934 374 TILFFVFTLANTGIPLSLNFLG 395
Cdd:CHL00049 379 ALSLALCLLSLGGIPPLAGFFG 400
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
282-468 |
1.27e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 41.16 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 282 AVIAIIYASLSTIIQQDTKRLIAYSSIAHMGVVVLGLFSNTIQGIEGAILLALAHGFVSpalfICVGGIIYDRTGTR-VI 360
Cdd:MTH00199 254 AVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMIIYVIMS----ICSFSIILSLKLTKgLI 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 361 NYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFLGEQLSLI-GIWIQNPIIAALGATGIVLSACYSLFLFNRLSYGKLSP 439
Cdd:MTH00199 330 VEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLsGVSSGYYLICIIAVLSSVIAGVYYVRVVQIIYFQADYS 409
|
170 180 190
....*....|....*....|....*....|
gi 1778127934 440 LLTPVKDLNRREYYLLI-SLIIPTIAFGIL 468
Cdd:MTH00199 410 ILIWQKVLKKEERLDLSkSILIGVTFFIIL 439
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
47-466 |
2.88e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 40.34 E-value: 2.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 47 FISLFIWYQFDSNTTQYQFVSEFNQLNFC-HLNFGVDGISLYFVLLTTFVT-PIALLSNY---ANINKN-----LKIFLV 116
Cdd:MTH00208 70 LINLLIWILLGCPNINISLSNWLSNTLFNfSLSFIFDFYFILFFSVALFVTwSIIEFSHYymsNDPNKNaffrlLIIFLL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 117 SFLLLESlqicafvSLDLLLFYVFFESVLPILFIVIIIFGHGNDRFRSAFLLFLYTLAGSLPMLLCI-LVIYSYIGSTDF 195
Cdd:MTH00208 150 NMLILTS-------SNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLsLSLINFNSWNLN 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 196 QLISLYEISLDSQKLLWLGFFLAFAVKTPLYPFIIWLPKAhADSPLAGSIILAATILKLATYgYLRVLINFLPDATNYFN 275
Cdd:MTH00208 223 EILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSALLHSSTMVVAGV-FLLIRTSPLISNSPWFL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 276 PLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMG--VVVLGLfsntiqgieGAILLAL----AHGFVSPALFICVGG 349
Cdd:MTH00208 301 SLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGlmVVAIGL---------NQPNLALfhicTHAFFKAMLFLCSGS 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 350 IIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIPLSLNFLGEQLSL--IGIWIQNPIIAALGATGIVLSACYS-- 425
Cdd:MTH00208 372 IIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILeaGLASISNLLSIILALIATLLTAVYSfr 451
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1778127934 426 --LFLFnrlSYGKLSPLLTPVKDLNRREYYLLISLIIPTIAFG 466
Cdd:MTH00208 452 iiFFCF---LNNPSFSPLSPISEENPNLTNPLLRLAIGTIISG 491
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
3-388 |
3.81e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 39.89 E-value: 3.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 3 TSLILIP---IIGSLLILLYPESTDQGKNKHTL---SIKqIALITSLINFFIslFIWYQFDSNTTQYQFVSEFNQlnfcH 76
Cdd:MTH00066 1 MNLMLIFnssMILSLLLLILPLLLPKSNNFHTNvktSVK-TAFFISLIPLMI--FINQGLESITTSFHWMNIFNF----N 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 77 LNfgvdgISLYFVLLTTFVTPIALLSNYA-------------NIN---KNLKIFLVSFLLLESlqicafvSLDLLLFYVF 140
Cdd:MTH00066 74 IN-----SSFKFDQYSIIFLPIALFVTWSilefaiwymhsdpKINrffKYLLIFLIAMMILVT-------ANNLFQLFIG 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 141 FESVLPILFIVIIIFGHGNDRFRSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISLyeiSLDSQKLLWLGFFLAFA 220
Cdd:MTH00066 142 WEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFL---LNDNSTLPLLGLILAAA 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 221 VKTPLYPFIIWLPKAhADSPLAGSIILAATILKLATygyLRVLINFLPDATNyfNPLIQTIAV----IAIIYASLSTIIQ 296
Cdd:MTH00066 219 GKSAQFGLHPWLPAA-MEGPTPVSALLHSSTMVVAG---IFLLIRFHPLLEN--NQTALTICLclgaLTTLFTAACALTQ 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 297 QDTKRLIAYSSIAHMG--VVVLGLfsNTIQGiegAILLALAHGFVSPALFICVGGIIYDRTGTRVINYIRGLVTYMPVFT 374
Cdd:MTH00066 293 NDIKKIVAFSTSSQLGlmMVTIGL--NQPQL---AFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITT 367
|
410
....*....|....
gi 1778127934 375 ILFFVFTLANTGIP 388
Cdd:MTH00066 368 SCLTIGSLALTGTP 381
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
14-388 |
5.46e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 39.16 E-value: 5.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 14 LLILLYP--ESTDQGKNKHTLSIKqIALITSLInfFISLFIWYQFDSNTTQYQFVSEFnqLNFCHLNFGVDGISLYFVLL 91
Cdd:MTH00211 13 LILLLLPllLPLNNSKLHIKKAVK-LSFFISLI--PLLIFLDQGLETILTNWSWINLG--LFSLNLSFKFDFYSIFFTSV 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 92 TTFVTPIALL---------SNYANINKNLKIFLVSFLLLESlqicafvSLDLLLFYVFFESVLPILFIVIIIFGHGNDRF 162
Cdd:MTH00211 88 ALYVTWSILEfslwymssePNINRFFKYLLLFLIFMLILVS-------ANNLFQLFIGWEGVGIMSFLLISWWYGRSDAN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 163 RSAFLLFLYTLAGSLPMLLCILVIYSYIGSTDFQLISlyeISLDSQKLLWLGFFLAFAVKTPLYPFIIWLPKAHA----- 237
Cdd:MTH00211 161 TAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLF---ILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEgptpv 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 238 DSPLAGSIILAATIlklatygYLRVLINFLPDATNYFNPLIQTIAVIAIIYASLSTIIQQDTKRLIAYSSIAHMG--VVV 315
Cdd:MTH00211 238 SALLHSSTMVVAGV-------FLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGlmMVT 310
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1778127934 316 LGLFSNTIqgiegAILLALAHGFVSPALFICVGGIIYDRTGTRVINYIRGLVTYMPVFTILFFVFTLANTGIP 388
Cdd:MTH00211 311 LGLNQPQL-----AFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFP 378
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
217-312 |
9.37e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 38.27 E-value: 9.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778127934 217 LAFAVKTPLYPFIIWLPKAHADSPLAGSIILAaTILKLATYGYLRVLINFLPdatnyfNPLIQTIAVIAIIYASLSTIIQ 296
Cdd:MTH00112 100 LALAMKLGLAPFHFWLPEVLQGSTTTTALILS-TWQKLAPLTLLLMTSNSLN------PTLLLTLAILSTLIGGWGGLNQ 172
|
90
....*....|....*.
gi 1778127934 297 QDTKRLIAYSSIAHMG 312
Cdd:MTH00112 173 TQLRKIMAFSSIAHLG 188
|
|
| |
