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Conserved domains on  [gi|1824664455|ref|YP_009738998|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Koreoleptoxis nodifila]

Protein Classification

Na(+)/H(+) antiporter subunit C( domain architecture ID 10009589)

Na(+)/H(+) antiporter subunit C (MrpC) is part of a heterooligomeric complex together with MrpA, MrpB, MrpD, MrpE, MrpF and MrpG, which is involved in resistance to Na(+) and excretion of Li(+) and Na(+)

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 5-96 3.45e-17

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 214434  Cd Length: 97  Bit Score: 69.87  E-value: 3.45e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824664455  5 LVLVSLASFLMALLSLAFRYKHLLSVLLSLEALTMSIFILLFSLFS-TTISGEAALIFITLGACEASLGLSVLVSMIRAR 83
Cdd:MTH00149   5 LLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGlISFSSYLFLIILTFGACEASLGLSLLVSLIRLH 84

                         90
                 ....*....|...
gi 1824664455 84 GNDYVSSFSTQKC 96
Cdd:MTH00149  85 GNDYVSSLSSLKF 97
 
Name Accession Description Interval E-value
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 5-96 3.45e-17

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 69.87  E-value: 3.45e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824664455  5 LVLVSLASFLMALLSLAFRYKHLLSVLLSLEALTMSIFILLFSLFS-TTISGEAALIFITLGACEASLGLSVLVSMIRAR 83
Cdd:MTH00149   5 LLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGlISFSSYLFLIILTFGACEASLGLSLLVSLIRLH 84

                         90
                 ....*....|...
gi 1824664455 84 GNDYVSSFSTQKC 96
Cdd:MTH00149  85 GNDYVSSLSSLKF 97
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
4-96 1.58e-06

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 42.17  E-value: 1.58e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824664455  4 FLVLVSLASFLMALLSLAFRyKHLLSVLLSLEALTMS--IFILLFSLFSTTISGEA-ALIFITLGACEASLGLSVLVSMI 80
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLLLR-RNLLRVLLSLELMLNAvnLALVLFGRLTADPLPQAlILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|....*.
gi 1824664455 81 RARGNDYVSSFSTQKC 96
Cdd:pfam00420 80 RTHGTDDVDSLNLLKG 95
 
Name Accession Description Interval E-value
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 5-96 3.45e-17

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 69.87  E-value: 3.45e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824664455  5 LVLVSLASFLMALLSLAFRYKHLLSVLLSLEALTMSIFILLFSLFS-TTISGEAALIFITLGACEASLGLSVLVSMIRAR 83
Cdd:MTH00149   5 LLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGlISFSSYLFLIILTFGACEASLGLSLLVSLIRLH 84

                         90
                 ....*....|...
gi 1824664455 84 GNDYVSSFSTQKC 96
Cdd:MTH00149  85 GNDYVSSLSSLKF 97
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 12-96 1.26e-11

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 55.62  E-value: 1.26e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824664455 12 SFLMALLSLAFRYKHLLSVLLSLEALTMSIFILLFSLFSTTISGEAAL---IFITLGACEASLGLSVLVSMIRARGNDYV 88
Cdd:MTH00125  11 AFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPmpiILLTFSACEAGTGLALLVATTRTHGSDHL 90


                 ....*...
gi 1824664455 89 SSFSTQKC 96
Cdd:MTH00125  91 KNLNLLQC 98
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 11-96 1.44e-10

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 53.04  E-value: 1.44e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824664455 11 ASFLMALLSLAFRYKHLLSVLLSLEALTMSIFILLfSL----FSTTISGEAALIFITLGACEASLGLSVLVSMIRARGND 86
Cdd:MTH00126  10 SAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIAL-SLwalqLESTSFSAAPMLLLAFSACEASAGLALLVATARTHGTD 88

                         90
                 ....*....|
gi 1824664455 87 YVSSFSTQKC 96
Cdd:MTH00126  89 RLQNLNLLQC 98
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 12-96 3.51e-09

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 49.36  E-value: 3.51e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824664455 12 SFLMALLSLAFRYKHLLSVLLSLEA--LTMSIFILLFSLFSTTISGEAALIFITLGACEASLGLSVLVSMIRARGNDYVS 89
Cdd:MTH00013  11 SPFISMFNLSLQRKHLLMSLLSLEAmiLSLALFIPLSLMFANQVNGMLAIVLLTFGACEASLGLSLLVLMTRSYGNDMLK 90


                 ....*..
gi 1824664455 90 SFSTQKC 96
Cdd:MTH00013  91 SLTSNKC 97
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 5-96 3.92e-09

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 49.20  E-value: 3.92e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824664455  5 LVLVSLASFLMALLSLAFRYKHLLSVLLSLEALTMSIFILLFSLFSTTISGE-AALIFITLGACEASLGLSVLVSMIRAR 83
Cdd:MTH00188   5 MILVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELyLSLVLLTFAACEASVGLALLVSLIRSH 84

                         90
                 ....*....|...
gi 1824664455 84 GNDYVSSFSTQKC 96
Cdd:MTH00188  85 GSDYVSSLNLIKC 97
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 11-96 4.10e-09

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 49.22  E-value: 4.10e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824664455 11 ASFLMALLSLAFRYKHLLSVLLSLEALTMSIFILLF---SLFSTTISGEAALIFITLGACEASLGLSVLVSMIRARGNDY 87
Cdd:MTH00067  10 SAFLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSlwsTQFESLSYFSLPMFMLTFSACEASTGLALMVATTRTHGTDH 89


                 ....*....
gi 1824664455 88 VSSFSTQKC 96
Cdd:MTH00067  90 LKNLNLLQC 98
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 4-90 8.81e-09

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 47.84  E-value: 8.81e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824664455  4 FLVLVSLASFLMALLSLAFRYKHLLSVLLSLEALTMSIFILLFS-LFSTTISGEAALIFITLGACEASLGLSVLVSMIRA 82
Cdd:MTH00162   2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLyLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRS 81


                 ....*...
gi 1824664455 83 RGNDYVSS 90
Cdd:MTH00162  82 HGNDYFSS 89
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 13-96 1.17e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 42.61  E-value: 1.17e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824664455 13 FLMALLSLAFRYKHLLSVLLSLEALTMSIFI---LLFSLFSTTISGEAALIFITLGACEASLGLSVLVSMIRARGNDYVS 89
Cdd:MTH00107  12 FTISLLGLLMYRSHLMSSLLCLEGMMLSLFImatLTILNTHFTLASMMPIILLVFAACEAAVGLALLVMVSNTYGTDYVQ 91


                 ....*..
gi 1824664455 90 SFSTQKC 96
Cdd:MTH00107  92 NLNLLQC 98
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
4-96 1.58e-06

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 42.17  E-value: 1.58e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824664455  4 FLVLVSLASFLMALLSLAFRyKHLLSVLLSLEALTMS--IFILLFSLFSTTISGEA-ALIFITLGACEASLGLSVLVSMI 80
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLLLR-RNLLRVLLSLELMLNAvnLALVLFGRLTADPLPQAlILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|....*.
gi 1824664455 81 RARGNDYVSSFSTQKC 96
Cdd:pfam00420 80 RTHGTDDVDSLNLLKG 95
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 4-95 2.57e-06

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 41.83  E-value: 2.57e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824664455  4 FLVLVSLASFLMALLSLAFRYKHLLSVLLSLEALTMSIFILLF---SLFSTTISGEAALIFITLGACEASLGLSVLVSMI 80
Cdd:MTH00043   3 IILIIILSSFFLGLLGILINRLHLLSILLCLELLLISLFLNISiwsLNYGNFSNLSFSLLLLTLSACEASIGLSLMVLLS 82

                         90
                 ....*....|....*
gi 1824664455 81 RARGNDYVSSFSTQK 95
Cdd:MTH00043  83 RNHNSDLVASLNLLQ 97
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 5-93 4.60e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 41.08  E-value: 4.60e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824664455  5 LVLVSLASFLMALLSLAFRYKHLLSVLLSLEALTMSIFILL---FSLFSTTISGEAALIFITLGACEASLGLSVLVSMIR 81
Cdd:MTH00181   1 MMFVFISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLalfSLLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNR 80

                         90
                 ....*....|..
gi 1824664455 82 ARGNDYVSSFST 93
Cdd:MTH00181  81 THGSDHLLKFNL 92
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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