NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1935445561|ref|YP_009945169|]
View 

NADH dehydrogenase subunit 4L (mitochondrion) [Monomorium pharaonis]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 6-90 1.77e-05

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 39.37  E-value: 1.77e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445561  6 ILIYSQLFFISLLLLVFLYKFMLVMLLLMELMVMIISLLMFMILGLMNMEFY-LIYYLIFGVCEGVLGLSLLVMIIRFSG 84
Cdd:MTH00162   4 LLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYfLLFFLTFSVCEGALGLSILVSMIRSHG 83


                 ....*.
gi 1935445561 85 GEIYYM 90
Cdd:MTH00162  84 NDYFSS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 6-90 1.77e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 39.37  E-value: 1.77e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445561  6 ILIYSQLFFISLLLLVFLYKFMLVMLLLMELMVMIISLLMFMILGLMNMEFY-LIYYLIFGVCEGVLGLSLLVMIIRFSG 84
Cdd:MTH00162   4 LLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYfLLFFLTFSVCEGALGLSILVSMIRSHG 83


                 ....*.
gi 1935445561 85 GEIYYM 90
Cdd:MTH00162  84 NDYFSS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 6-90 1.77e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 39.37  E-value: 1.77e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445561  6 ILIYSQLFFISLLLLVFLYKFMLVMLLLMELMVMIISLLMFMILGLMNMEFY-LIYYLIFGVCEGVLGLSLLVMIIRFSG 84
Cdd:MTH00162   4 LLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYfLLFFLTFSVCEGALGLSILVSMIRSHG 83


                 ....*.
gi 1935445561 85 GEIYYM 90
Cdd:MTH00162  84 NDYFSS 89
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH