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Conserved domains on  [gi|1980532917|ref|YP_009994963|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Octopus sinensis]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009588)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 1.13e-38

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 125.74  E-value: 1.13e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917   1 MYSFSLFALFLIILNVILFIISSLIMFKNNMNREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMPMIIN 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1980532917  81 LLFSPSTIYLSSSMTFLIILIIGLLHEWNQGSLNWM 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 1.13e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 125.74  E-value: 1.13e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917   1 MYSFSLFALFLIILNVILFIISSLIMFKNNMNREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMPMIIN 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1980532917  81 LLFSPSTIYLSSSMTFLIILIIGLLHEWNQGSLNWM 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 1.70e-15

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 65.91  E-value: 1.70e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917  19 FIISSLIMFKNNmNREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMPMIINlLFSPSTIYLSSSMTFLI 98
Cdd:pfam00507   1 LLLSRLLGPKRP-NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVS-FRELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1980532917  99 ILIIGLLHEWNQGSLN 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 6-76 2.83e-15

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 66.30  E-value: 2.83e-15
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1980532917   6 LFALFLIILNVILFIISSLIMfKNNMNREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMP 76
Cdd:COG0838    10 IFLLVALGLALAMLLLSRLLG-PKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFP 79
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 1.13e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 125.74  E-value: 1.13e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917   1 MYSFSLFALFLIILNVILFIISSLIMFKNNMNREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMPMIIN 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1980532917  81 LLFSPSTIYLSSSMTFLIILIIGLLHEWNQGSLNWM 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 12-116 1.26e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 97.76  E-value: 1.26e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917  12 IILNVILFIISSLIMFKNNMNREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMPMIINLLFSPSTIYLS 91
Cdd:MTH00202   12 ILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGLL 91

                          90       100
                  ....*....|....*....|....*
gi 1980532917  92 SSMTFLIILIIGLLHEWNQGSLNWM 116
Cdd:MTH00202   92 GGTIFLLILIGGLIHEWKEGSLDWV 116
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 4-115 1.80e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 89.45  E-value: 1.80e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917   4 FSLFALFLIILNVILFIISSLIMFKNNMNREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMPMIINLLF 83
Cdd:MTH00161    2 ILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKT 81

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1980532917  84 SPSTIYLSSSMTFLIILIIGLLHEWNQGSLNW 115
Cdd:MTH00161   82 SNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 12-115 9.57e-23

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 85.30  E-value: 9.57e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917  12 IILNVILFIISSLIMFKNNMNREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMPMIINLLFSPSTIYLS 91
Cdd:MTH00012   12 LILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVY 91

                          90       100
                  ....*....|....*....|....
gi 1980532917  92 SSMTFLIILIIGLLHEWNQGSLNW 115
Cdd:MTH00012   92 TSILFLLILVIGLIHEWREGSLDW 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 6.38e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 78.10  E-value: 6.38e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917   1 MYSFSLFALFLIILNVILFIISSlIMFKNNMNREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMPMIIN 80
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGH-FLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1980532917  81 LLFSPSTIYLSSSMTFLIILIIGLLHEWNQGSLNW 115
Cdd:MTH00042   80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEW 114
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-115 1.05e-18

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 74.93  E-value: 1.05e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917   1 MYSFSLFALFLIILNVILFIISSLIMfKNNMNREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMPMIIN 80
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFIAFWLP-KVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1980532917  81 LLFSPSTIYLSSSmtFLIILIIGLLHEWNQGSLNW 115
Cdd:MTH00203   80 NQLSSLSLLLAFL--FLILLTLGLIYEWLQGGLEW 112
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 12-115 1.19e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 72.28  E-value: 1.19e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917  12 IILNVILFIISSLIMF---KNNMNREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMPMIINLLFSPSTI 88
Cdd:MTH00106    7 LLTNTLLASLLVLIAFwlpQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNT 86

                          90       100
                  ....*....|....*....|....*..
gi 1980532917  89 YLSSSMTFLIILIIGLLHEWNQGSLNW 115
Cdd:MTH00106   87 MLTMALLLISLLALSLAYEWTQKGLEW 113
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 6-115 2.26e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 71.56  E-value: 2.26e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917   6 LFALFLIILNVILFIISSLIMFkNNMNREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMPM--IINLLF 83
Cdd:MTH00069    4 LMLLISTILSLILITISFWLPL-NNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwASQLNT 82

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1980532917  84 SPSTIYLssSMTFLIILIIGLLHEWNQGSLNW 115
Cdd:MTH00069   83 PTNTLFW--STLILILLTLGLIYEWIQGGLEW 112
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 12-115 7.24e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 70.33  E-value: 7.24e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917  12 IILNVILFIISsLIMFKNNMNREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMPMII-NLLFSPSTIYL 90
Cdd:MTH00136   12 IALSLILAIVS-FWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWgDQLPSPLLTFF 90

                          90       100
                  ....*....|....*....|....*
gi 1980532917  91 SSSmTFLIILIIGLLHEWNQGSLNW 115
Cdd:MTH00136   91 WAT-AVLILLTLGLIYEWLQGGLEW 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 11-116 1.19e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 69.52  E-value: 1.19e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917  11 LIILNVILFIISSLIMFKNNM------NREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMPMIINLLFS 84
Cdd:MTH00113    3 LISMLTISLALSTILTTLNFWltqtkpDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLT 82

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1980532917  85 PSTIYLSSSMTFLIILIIGLLHEWNQGSLNWM 116
Cdd:MTH00113   83 TPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 1.70e-15

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 65.91  E-value: 1.70e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917  19 FIISSLIMFKNNmNREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMPMIINlLFSPSTIYLSSSMTFLI 98
Cdd:pfam00507   1 LLLSRLLGPKRP-NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVS-FRELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1980532917  99 ILIIGLLHEWNQGSLN 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 6-76 2.83e-15

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 66.30  E-value: 2.83e-15
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1980532917   6 LFALFLIILNVILFIISSLIMfKNNMNREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMP 76
Cdd:COG0838    10 IFLLVALGLALAMLLLSRLLG-PKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFP 79
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 7-115 1.61e-13

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 61.80  E-value: 1.61e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917   7 FALFLIILNVI--LFIISSLIMFKNNMNREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMPMIINLLFS 84
Cdd:PRK06602   11 FLIFLIVAIGLgiLLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREI 90

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1980532917  85 pSTIYLSSSMTFLIILIIGLLHEWNQGSLNW 115
Cdd:PRK06602   91 -GWLGFVEAMIFILVLLVGLVYLWRKGALDW 120
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 2-115 1.36e-11

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 56.61  E-value: 1.36e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917   2 YSFSLFALFLIILNVILFIISSLIMFKNNmNREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMPMIINL 81
Cdd:MTH00018    1 YGLFILLIFSVVLSALFSGASYFLGVKQP-DREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLY 79

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1980532917  82 ----LFSPSTIYLsssmtFLIILIIGLLHEWNQGSLNW 115
Cdd:MTH00018   80 nqiaPFGFWTMVG-----FLFILTLGLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 1-115 7.06e-11

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 54.72  E-value: 7.06e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917   1 MYSFSLFALFLIILNVILFIISSLIMFKNNmNREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMP---- 76
Cdd:MTH00055    5 FLGIFILLLFSIGLSTVISGASYIVGVKQP-DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPwcvv 83

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1980532917  77 MIINLLFSPSTIYLsssmtFLIILIIGLLHEWNQGSLNW 115
Cdd:MTH00055   84 YNQIGLFGFWVMYL-----FLIILTIGLIYEWVKGGLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 5-115 9.65e-09

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 49.55  E-value: 9.65e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917   5 SLFALFLIILNVILFIISSLIMFKNNM------NREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMPMI 78
Cdd:MTH00030    7 TIFFSTLLGVGIILLLVSISFTLGNSRigltkpDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWS 86

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1980532917  79 INL----LFSPSTIYlsssmTFLIILIIGLLHEWNQGSLNW 115
Cdd:MTH00030   87 IVFnqlnLFSFWIVY-----TFLIVLAIGLAYEWIKGGLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 32-115 3.34e-07

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 45.43  E-value: 3.34e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917  32 NREKNSPFECGFDPSWYTRSP--FSMRFFLLAVIFLIFDVEIILLMPMIINlLFSPSTIYLSSSMTFLIILIIGLLHEWN 109
Cdd:PRK07928   34 NRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVS-FDALGVFGLVEMALFMLTVFVAYAYVWR 112


                  ....*.
gi 1980532917 110 QGSLNW 115
Cdd:PRK07928  113 RGGLEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 3-115 1.59e-04

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 38.04  E-value: 1.59e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917   3 SFSLFALFLIILNVILFIISSLIMFKNNmNREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMP--MIIN 80
Cdd:CHL00022    9 IFWAFLIISSLIPILAFLISGLLAPISK-GPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPwaMSFD 87

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1980532917  81 LLFSPSTIylsSSMTFLIILIIGLLHEWNQGSLNW 115
Cdd:CHL00022   88 VLGVSAFI---EALIFVLILIVGLVYAWRKGALEW 119
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 1-80 3.31e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.18  E-value: 3.31e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917   1 MYSFSLFALFLIILNVILFIISSLIMFKNNMNREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMPMIIN 80
Cdd:MTH00060    3 VLLFVFFVFFLLFLVIYFFHSGLWNNKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPFQ 82
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
4-80 4.66e-04

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 36.95  E-value: 4.66e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917   4 FSLFALFLIILNVILFIIS--SLIMFKNNMNREKNSPFECGFDPswyTRSP--FSMRFFLLAVIFLIFDVEIILLMPMII 79
Cdd:PRK08489   14 FVLLVLTFVAFFLTTRLARfiSRKLAQKNTEKLKLAIYECGPEP---VKQPnrISSHFYIMALLFILFDVEIVFMFPWAV 90


                  .
gi 1980532917  80 N 80
Cdd:PRK08489   91 D 91
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-76 5.57e-04

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 36.64  E-value: 5.57e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1980532917  32 NREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMP 76
Cdd:PRK07756   39 SAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP 83
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-84 2.46e-03

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 34.87  E-value: 2.46e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980532917   1 MYSFSLFALFLIILNVILFIISSLIMFKNNmNREKNSPFECGFDPSWYTRSPFSMRFFLLAVIFLIFDVEIILLMPMIIN 80
Cdd:MTH00092    1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKKF-DLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79


                  ....
gi 1980532917  81 LLFS 84
Cdd:MTH00092   80 DFSS 83
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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