|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.15e-162 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 457.36 E-value: 2.15e-162
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 1 MNPQAKLVFTLSLLLGTTITLSSNHWVMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALVLFSSMTNAWH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 81 TGQWDITQLTHPVSSLVLTSAIAMKLGLVPFHFWFPEVMQGSSLLTGLLLSTLMKLPPIALLFMTAQSLNSSLLVLMAIL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 161 SAAVGGWMGLNQTQVRKILAFSSISHLGWMAIIITYYPKLTLLNFYLYAVMTTAVFLALNSMKALSLPTLMTAWTKTPSL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 241 SAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQDMAPAATIISLLSLLSLFFYLRLAYCTAITLPPHTTNQIKQWRINKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 1998563282 321 VNILVAILVTMSIILLPISPMILSIP 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
3.53e-129 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 372.99 E-value: 3.53e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 1 MNPQAKLVFTLSLLLGTTITLSSNHWVMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALVLFSSMTNAWH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 81 TGQWDITQLTHPVSSLVLTSAIAMKLGLVPFHFWFPEVMQGSSLLTGLLLSTLMKLPPIALLFMTAQSlNSSLLVLMAIL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 161 SAAVGGWMGLNQTQVRKILAFSSISHLGWMAIIITYYPKLTLLNFYLYAVMTTAVFLALNSMKALSLPTLMTAWTKTPSL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 241 SAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQDMAPAATIISLLSLLSLFFYLRLAYCTAITLPPHTTNQIKQWRINKP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*.
gi 1998563282 321 VNIL-VAILVTMSIILLPISPMILSI 345
Cdd:MTH00135 320 QLTLpLAISTTATLMLLPLTPAILAL 345
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
1.75e-128 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 371.18 E-value: 1.75e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 1 MNPQAKLVFTLSLLLGTTITLSSNHWVMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALVLFSSMTNAWH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 81 TGQWDITQLTHPVSSLVLTSAIAMKLGLVPFHFWFPEVMQGSSLLTGLLLSTLMKLPPIALLFMTAQSLNSSLLVLMAIL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 161 SAAVGGWMGLNQTQVRKILAFSSISHLGWMAIIITYYPKLTLLNFYLYAVMTTAVFLALNSMKALSLPTLMTAWTKTPSL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 241 SAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQDMAPAATIISLLSLLSLFFYLRLAYCTAITLPPHTTNQIKQWRINKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*
gi 1998563282 321 VNILVAILVTMSIILLPISPMILSI 345
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
5.28e-111 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 326.80 E-value: 5.28e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 1 MNPQAKLVFTLSLLLGTTITLSSNHWVMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALVLFSSMTNAWH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 81 TGQWDITQLTHPVSSLVLTSAIAMKLGLVPFHFWFPEVMQGSSLLTGLLLSTLMKLPPIALLFMTAQSLNSSLLVLMAIL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 161 SAAVGGWMGLNQTQVRKILAFSSISHLGWMAIIITYYPKLTLLNFYLYAVMTTAVFLALNSMKALSLPTLMTAWTKTPSL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 241 SAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQDMAPAATIISLLSLLSLFFYLRLAYCTAITLPPHTTNQIKQWRINKP 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....*.
gi 1998563282 321 -VNILVAILVTMSIILLPISPMILSI 345
Cdd:MTH00105 321 kPMTLLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.67e-93 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 281.86 E-value: 2.67e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 1 MNPQAKLVFTLSLLLGTTITLSSNHWVMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALVLFSSMTNAWH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 81 TGQWDITQLTHPVSSLVLTSAIAMKLGLVPFHFWFPEVMQGSSLLTGLLLSTLMKLPPIALLFMTAQSLNSSLLVLMAIL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 161 SAAVGGWMGLNQTQVRKILAFSSISHLGWMAIIITYYPKLTLLNFYLYAVMTTAVFLALNSMKALSLPTLMTAWTKTPSL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 241 SAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQDMAPAATIISLLSLLSLFFYLRLAYCTAITLPPHTTNQIKQWRINKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 1998563282 321 VNILVAILVTMSIILLPISPMILSIP 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-346 |
7.81e-78 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 242.14 E-value: 7.81e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 1 MNPQAKLVFTLSLLLGTTITLSSNHWVMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALVLFSSMTNAWH 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 81 TGQWDITQLTHPVSSLVLTSAIAMKLGLVPFHFWFPEVMQGSSLLTGLLLSTLMKLPPIALLFMTAQSLNSSLLVLMAIL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 161 SAAVGGWMGLNQTQVRKILAFSSISHLGWMAIIITYYPKLTLLNFYLYAVMTTAVFLALNSMKALSLPTLMTAWTKTPSL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 241 SAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQDMAPAATIISLLSLLSLFFYLRLAYCTAITLPPHTTNQIKQWRINKP 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330 340
....*....|....*....|....*....
gi 1998563282 321 VNIL---VAILVTMSIILLPISPMILSIP 346
Cdd:MTH00041 321 ITVYgviLSILSSISILGLLLIPLFLSFL 349
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
2.52e-52 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 175.78 E-value: 2.52e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 1 MNPQAKLVFTLSLLLGTTITLSSNHWVMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALVLFSSMTNAWh 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 81 tgqwdITQLTHPVSSLVLTSAIAMKLGLVPFHFWFPEVMQGSSLLTGLLLSTLMKLPPIALLFMTaqsLNSSLLVLMAIL 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 161 SAAVGGWMGLNQTQVRKILAFSSISHLGWMAIIITYYPKLTLLNFYLYAVMTTAVFLALNSMKALSLPTLMTAWTKTPSL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 241 SAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQDMAPAATIISLLSLLSLFFYLRLAYcTAITLPPHTTNQIKQWRINKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISY-SSLMLNYNKNKWNLKKKKNKF 311
|
330 340
....*....|....*....|....*
gi 1998563282 321 VNILVaILVTMSIILLPISPMILSI 345
Cdd:MTH00160 312 SLILN-FLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-310 |
1.31e-45 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 158.40 E-value: 1.31e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 7 LVFTLSLLLGTTITLSSNHWVMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALVLFSSmtnawhTGQWDI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 87 TQLTHPVSSLVLTSAIAMKLGLVPFHFWFPEVMQGSSLLTGLLLSTLMKLPPIALLFMTAQSLNSSLLVLMAILSAAVGG 166
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 167 WMGLNQTQVRKILAFSSISHLGWMAIIITYYPKLTLLNFYLYAVMTTAVFLALNSMKALSLPTLMTAWTKTPSLSAMLLL 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1998563282 247 TLLSLAGLPPLTGFLPKWLIIQELTKQDMAPAATIISLLSLLSLFFYLRLAYcTAITLPPHTTN 310
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS 305
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-339 |
2.59e-44 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 154.66 E-value: 2.59e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 5 AKLVFTLSLLLGTTITLSSNHWVMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALVLFSSMTNAWHTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 85 DitqlthpvSSLVLTSAIAMKLGLVPFHFWFPEVMQGSSLLTGLLLSTLMKLPPIALLFMTAQSLN-SSLLVLMAILSAA 163
Cdd:MTH00144 85 F--------SMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWlAYLLCVISVLSAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 164 VGGWMGLNQTQVRKILAFSSISHLGWMAIIITYYPKLTLLNFYLYAVMTTAVFLALNSMKALSLpTLMTAWTKTPSLSAM 243
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSM-KDLGSLKPSYKTGLS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 244 LLLTLLSLAGLPPLTGFLPKWLIIQELTKQDMAPAATIISLLSLLSLFFYLRLAYCTAITLpphtTNQIKQWRINKPVNI 323
Cdd:MTH00144 236 IISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSS----SKSKKSNSSKVLNSS 311
|
330
....*....|....*.
gi 1998563282 324 LVAILVTMSIILLPIS 339
Cdd:MTH00144 312 IISLNLLGGLLFLLLY 327
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-342 |
5.04e-37 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 135.57 E-value: 5.04e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 8 VFTLSLLLGTTITLSSNHWVMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALVLFSSMTNAWHTgqwdit 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL------ 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 88 qLTHPVSSLVLTSAIAMKLGLVPFHFWFPEVMQGSSLLTGLLLSTLMKLPPIALLfmTAQSLNSSLLVLMAILSAAVGGW 167
Cdd:MTH00197 76 -YLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLIL--AFNSSSFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 168 MGLNQTQVRKILAFSSISHLGWMAIIITYYPKLTLLNFYLYAVMTTAVFLALNSMKALSLPTLMTAWTKTPSLSAMLLLT 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 248 LLSLAGLPPLTGFLPKWLIIQELTKQDMAPAATIISLLSLLSLFFYLRLAYCTAItlppHTTNQIKQWRINKPVNILVAI 327
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI----LSNWMINFLMKINLLYSGLFI 308
|
330
....*....|....*
gi 1998563282 328 LVTMSIILLPISPMI 342
Cdd:MTH00197 309 LLMMMLPLLMIFTMI 323
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
9.17e-20 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 87.75 E-value: 9.17e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 23 SNHWVMAWTGLEINTLAILPLI-SKSHHPRAIEAATKYFLVQAAASALVLFSSMTNAWHTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 91 HPVSSLVLTSAIAMKLGLVPFHFWFPEVMQGSSLLTGLLLSTLM-KLPPIAL-----LFMTAQSLNSSLLVLMAILSAAV 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLvKAGGYGLirrslLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 165 GGWMGLNQTQVRKILAFSSISHLGWM--AIIITYYPKLTLLNFYL--YAVMTTAVFLALNS-----MKALSLPTLMTAWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMliALGAGTIYGIQAAIFHLltHGLFSAGLFLCAGSviyrrVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 1998563282 236 KTPSLSAMLLLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-298 |
1.54e-18 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 86.32 E-value: 1.54e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 8 VFTLSLLLGTTITLSSNHWVMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASALVLF-SSMTNAWhTGQWD 85
Cdd:COG1007 106 ALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYGA-TGSLN 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 86 ITQLTHPVSS-----------LVLT-SAIAMKLGLVPFHFWFPEVMQGSSLLTGLLLSTLMKLPPIALL-------FMTA 146
Cdd:COG1007 185 LAGIAAALAAgganspllllgLVLVlAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALlrllveaFPGL 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 147 QSLNSSLLVLMAILSAAVGGWMGLNQTQVRKILAFSSISHLGWMAIIITYYPKLTL--LNFYL--YAVMTTAVFLALNSM 222
Cdd:COG1007 265 AADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILLL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 223 K-----ALSLPTLMTAWTKTPSLSAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQDMAPAATIISLLSLLSLFFYLRLA 297
Cdd:COG1007 345 SrkggeAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVV 424
|
.
gi 1998563282 298 Y 298
Cdd:COG1007 425 K 425
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
3.88e-18 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 84.31 E-value: 3.88e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 13 LLLGTTITLSSNHWVMAWTGLEINTLAILPLI-SKSHHPRAIEAATKYFLVQAAASALVLFS-------------SMTNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 79 WHTGQWDITQLTHPVSSLVLTSAIAMKLGLVPFHFWFPEVMQGSSLLTGLLLSTLMKLPPIALLFMTaqSLNSSLLVLMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSI--GLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 159 ILSAAVGGWMGLNQTQVRKILAFSSISHLGWMAIIITYYP----KLTLLNFYLYAVMTTAVF---LALNSMKALsLPTLM 231
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFsiiLALNVYKNL-IIEFS 238
|
250 260 270
....*....|....*....|....*....|....*.
gi 1998563282 232 TAWTKTPSLSAMLLLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00196 239 GLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL 274
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
4.37e-18 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 85.00 E-value: 4.37e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 14 LLGTTITLSSNHWVMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASALVLFSSMTNAWHTGQWDITQLTHP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 93 VSSLVLT------------SAIAMKLGLVPFHFWFPEVMQGSSLLTGLLLSTLMKLPPIAL---LFMTAQS----LNSSL 153
Cdd:TIGR01770 192 LSNGMLNisllllgivlilVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVflrLFLYILFgfseAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 154 LVLMAILSAAVGGWMGLNQTQVRKILAFSSISHLGW--MAIIITYYPKLTLLNFYL--YAVMTTAVFLALNSMKALSLP- 228
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYilIGLLAGTLEGIKAVLFYIfiYALMSLGAFGVLSLLRSYKDEw 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1998563282 229 ----TLMTAWTKT-PSLSAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQDMAPAATIISLLSLLSLFFYLRLA 297
Cdd:TIGR01770 352 ieyiSDFAGLFKTnPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
8-296 |
1.50e-17 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 83.33 E-value: 1.50e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 8 VFTLSLL--LGTTITLSSNHWVMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASALVLFSSMTNAWHTGQW 84
Cdd:PRK05777 105 FYLLVLFalLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSL 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 85 DITQLTHPVSS------------LVLTSAIAMKLGLVPFHFWFPEVMQGSSLLTGLLLSTLMKLPPIALL-------FMT 145
Cdd:PRK05777 185 SFAGIAKALADgsgnsllllfglVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLlrllvvaFGG 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 146 AQSLNSSLLVLMAILSAAVGGWMGLNQTQVRKILAFSSISHLGWM--AIIITYYPKLTLLNFYL--YAVMTTAVFLALNS 221
Cdd:PRK05777 265 LSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlvGLAAGTAEGYSAVLFYLlaYLFMTLGAFGVISL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 222 MK-----ALSLPTLMTAWTKTPSLSAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQDMAPAATIISLLSLLSLFFYLRL 296
Cdd:PRK05777 345 LRrkggeAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
8-267 |
1.62e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 80.06 E-value: 1.62e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 8 VFTLSLLLGTTITLSSNHWVMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASALVLFSSMTNAWHTGQWDI 86
Cdd:MTH00199 101 ILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSI 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 87 ----TQLTHPVSSLVLTSAIAMKLGLVPFHFWFPEVMQGSSLLTGLLLSTLMKLPPIALLFMTAQSLNssLLVLMAILSA 162
Cdd:MTH00199 181 qginSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN--VVLICAVLSI 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 163 AVGGWMGLNQTQVRKILAFSSISHLGW----MAIIITYYPKLTLLNFYLYAVMTTAVF---LALNSMKALsLPTLMTAWT 235
Cdd:MTH00199 259 IYGAIGALNQTKIKRLLAYSGIGHMGFilfgVAIGSFESIQASLIYMIIYVIMSICSFsiiLSLKLTKGL-IVEVSGLSR 337
|
250 260 270
....*....|....*....|....*....|..
gi 1998563282 236 KTPSLSAMLLLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00199 338 KNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-210 |
7.63e-13 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 69.50 E-value: 7.63e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 3 PQAKLVFTLSLLLGTTITLSSNHWVMAWTGLEINTLAILPLISKSHHPRAI---------EAATKYFLVQAAASALVLFS 73
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 74 SMTNAWHTGQ--------------WDITQLTHPVSSLVLTSAIAMKLGLVPFHFWFPEVMQGSSLLTGLLLSTLMKLppI 139
Cdd:MTH00198 267 CALYFGFTGNegmlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--T 344
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1998563282 140 ALLFMTAQSLNSSLLVLMAILSAAVGGWMGLNQTQVRKILAFSSISHLGWMAIIITYYPKLTLLNFYLYAV 210
Cdd:MTH00198 345 VYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAV 415
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
9-282 |
1.65e-12 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 67.86 E-value: 1.65e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 9 FTLSLLLGTTITLSSNHWVMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALVLFSSMTNAWHTGQWDITQ 88
Cdd:COG0651 112 LFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMAD 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 89 LTHPVSSL----------VLTSAIAMKLGLVPFHFWFPEVMQGSSLLTGLLLSTLM-KLPPIAL-----LFMTAQSLN-- 150
Cdd:COG0651 192 LAARLAELdpglllaafaLLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVYAIlrvltLLFGADPALfl 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 151 SSLLVLMAILSAAVGGWMGLNQTQVRKILAFSSISHLGWMAIIITYYPKLTLLNFYLY----AVMTTAVFLA----LNSM 222
Cdd:COG0651 272 GTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHllnhALAKALLFLAagaiERAT 351
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 223 KALSLPTLMTAWTKTPSLSAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQDMAPAATII 282
Cdd:COG0651 352 GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVL 411
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
7-208 |
6.69e-09 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 56.94 E-value: 6.69e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 7 LVFTLSLLLGTTITLSSNHWVMAWTGLEINTLAILPLISKSHHP-RAIEAATKYFLVQAAASALVL--FSSM--TNAWHT 81
Cdd:CHL00049 114 LLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVygFSWLygLSGGEI 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 82 GQWDI------TQLTHPVSSLV----LTSAIAMKLGLVPFHFWFPEVMQGSSLLTGLLLSTLMKLPPIAL-------LFM 144
Cdd:CHL00049 194 ELQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALatrifdiPFY 273
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1998563282 145 TAQSLNSSLLVLMAILSAAVGGWMGLNQTQVRKILAFSSISHLGWMAI-IIT------YYPKLTLLNFYLY 208
Cdd:CHL00049 274 FSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIgIIVgdsndgYASMITYMLFYIF 344
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
2.92e-08 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 49.56 E-value: 2.92e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1998563282 291 FFYLRLAYCTAITLPPHTTNQIKQWRINKPVNI-LVAILVTMSIILLPISP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTlLLPTLTTLSILLLPLTP 51
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-192 |
1.96e-07 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 52.36 E-value: 1.96e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 50 PRAIEAATKYFLVQAAASALVLF-SSMTNAWHTGQwdiTQLTH----------PVSSLVLT---SAIAMKLGLVPFHFWF 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLSAialalitspsLGLALALVfviAGIAFKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 116 PEVMQGSSLLTGLLLSTLMKLPPIAL---LFMTAQSLNSS----LLVLMAILSAAVGGWMGLNQTQVRKILAFSSISHLG 188
Cdd:PRK02504 234 PDVYEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAG 313
|
....
gi 1998563282 189 WMAI 192
Cdd:PRK02504 314 FVMI 317
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
7.70e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 50.48 E-value: 7.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 33 LEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASALVLFS---------SMTNAWHTGQWDITQLTHPVSSLVL-TSA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENPTVVAKIALALfIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 102 IAMKLGLVPFHFWFPEVMQGSSLLTGLLLSTLMKLPPIAL------LFMTAQSLNSS--LLVLMAILSAAVGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAAPSSISAMLLVIKQAGLYALarvlfsIYGPAINLATVgwVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 174 QVRKILAFSSISHLGWM----AIIITYYpKLTLLNFYLYAVMTTAVFLALNS--MKAL---------------SLPTLMT 232
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMllglGVGLAAL-GDPAMASYGEIALAGGIYHIVNHalYKALlfltagaviyetgtrNLNELGG 388
|
250 260 270
....*....|....*....|....*....|....
gi 1998563282 233 AWTKTPSLSAMLLLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 389 LARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-192 |
9.74e-07 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 50.08 E-value: 9.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 49 HPRAIEAATKYFLVQAAASALVLFSSMTNAWHTGQW--DITQLTHPVSSLVLTSAI--------AMKLGLVPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAAPLPLTAQLLLflaffiafAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 119 -MQGSSLLTGLLLSTLMKLPPIAL------LFMTAQSLNSSLLVLMAILSAAVGGWMGLNQTQVRKILAFSSISHLGWMA 191
Cdd:COG1008 236 hVEAPTAGSVLLAGVLLKMGGYGLlrfalpLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVL 315
|
.
gi 1998563282 192 I 192
Cdd:COG1008 316 L 316
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-194 |
2.20e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 49.17 E-value: 2.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 50 PRAIEAATKYFLVQAAASALVLFSSMTNAW-HTGQWDITQL-THPVSSLVLT-------SAIAMKLGLVPFHFWFPEVM- 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFlGGGTFDLLELlNLPLPFGVQTwlflaffIAFAVKVPLFPLHTWLPDAHv 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 120 QGSSLLTGLLLSTLMKLPPIAL------LFMTAQSLNSSLLVLMAILSAAVGGWMGLNQTQVRKILAFSSISHLGWMAII 193
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFlrfnlpLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLG 311
|
.
gi 1998563282 194 I 194
Cdd:TIGR01972 312 I 312
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-194 |
5.53e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 47.83 E-value: 5.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 13 LLLGTTITLSSNHWVMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAA------SALVLFSSMTNAWHTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 87 TQLTHPVS----SLVLTSAIAM------KLGLVPFHFWFPEVMQGSSLLTGLLLSTLMK-------LPPIALLFMT-AQS 148
Cdd:PRK08676 191 TELAAHASllspSVLGASFLFIfigflaKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLnigiygiLRLSALLRQSgAAE 270
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1998563282 149 LNSSLLVLMAILSAAVGGWMGLNQTQVRKILAFSSISHLGWMAIII 194
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGI 316
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-275 |
1.73e-04 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 43.45 E-value: 1.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 2 NPQAKLVFTLSLLLGTTITLSSNHWVMAWTGLEINTLAILPLISKSHHpRAIEAATKYFLVQAAASALVLFSSMTNAWHT 81
Cdd:PRK08668 96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKT 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 82 GQWDITQLTHPVSS-----------LVLTSAIAMKLGLVPFHFWFPEV------------------MQGSSLLTGLLLST 132
Cdd:PRK08668 175 GTFDFADISQGLINdtstgfalivfLFLLAFGVAKAGIFPLHVWAPDAyseapqsfsavlsgqlskLGAYGFLLVLYVLP 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 133 LMKLPPIALLFMTAQSLNSSLLVLMAIlSAAVGGWMGLNQTQVRKILAFSSISHLGWMAIIITYypkLTLLNFY--LYAV 210
Cdd:PRK08668 255 GTKLFSEFGTYRGVPLFNYILAWLGNI-SIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGL---GTSLGFAggLFHV 330
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1998563282 211 MTTAVFLALN--SMKALSLPTLMTAWT-------KTPSLSAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQDM 275
Cdd:PRK08668 331 FNHALFKGLFflIFAAVIYRTGTTKISemgglieKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGM 404
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-190 |
2.78e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 42.76 E-value: 2.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 55 AATKYFLVQAAASALVLFSSMTNAWHTG--QWDITQL---THPVSS-LVLTSAI----AMKLGLVPFHFWFPEV-MQGSS 123
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTqLLLLAPIlvgfGIKIPLVPFHTWLPDAhVEAST 237
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1998563282 124 LLTGLLLSTLMKLPPIALL------FMTAQSLNSSLLVLMAILSAAVGGWMGLNQTQVRKILAFSSISHLGWM 190
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYI 310
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-194 |
4.69e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 41.94 E-value: 4.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 55 AATKYFLVQAAASALVLFSSMTNAWHTGQ--WDITQLTHPVSSLVLT--------SAIAMKLGLVPFHFWFPEVM-QGSS 123
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAKSYPLALElllyagflIAFGVKLPIFPLHTWLPDAHgEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1998563282 124 LLTGLLLSTLMKLPPIALLFMTAQSLN------SSLLVLMAILSAAVGGWMGLNQTQVRKILAFSSISHLGWMAIII 194
Cdd:PRK12561 218 PVSMILAGVLLKMGGYALIRFNVQMLPdahvyfAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGI 294
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
9-192 |
9.13e-04 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 41.07 E-value: 9.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 9 FTLSLLLgttiTLSSNHWVMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALVLFSS----------MTNA 78
Cdd:PRK06458 117 FLFTMLL----ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTilvyanaatvMGDG 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 79 WHTGQW-DITQLTHPVSSLVLTSAIAM-------KLGLVPFHFWFPEVMQGSSLLTGLLLSTLmkLPPIALL------FM 144
Cdd:PRK06458 193 EMAILWtELLKHASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDAHSEAPSPVSALLSGV--LLNVALYavlryyIL 270
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1998563282 145 TAQSLNS----SLLVLMAILSAAVGGWMGLNQTQVRKILAFSSISHLGWMAI 192
Cdd:PRK06458 271 IDAAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAF 322
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
7-190 |
9.83e-04 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 40.91 E-value: 9.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 7 LVFTLSLLLgttITLSSNHWVMaWTGLEINTLAILPLISKSHH-PRAIEAATKYFLVQAAASALVLFSSMTNAWHTGQWD 85
Cdd:COG1009 118 LLFMAAMLG---LVLSDNLLLL-FVFWELVGLCSYLLIGFWYEkPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLN 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 86 ITQLTHPVSSLVLTSAI----------AM-KLGLVPFHFWFPEVMQGSSlltglllstlmklPPIALL----------FM 144
Cdd:COG1009 194 FSELLAAAPTILSSPLLtlillllllgAFgKSAQFPLHFWLPDAMEGPT-------------PVSALLhaatmvkagvYL 260
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1998563282 145 TAQ-----SLNSSLLVLMAILSAA---VGGWMGLNQTQVRKILAFSSISHLGWM 190
Cdd:COG1009 261 LARlsplfALSPVWLTVVAIIGAItalFAALIALAQTDIKRVLAYSTVSQLGYM 314
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
9-194 |
1.17e-03 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 40.80 E-value: 1.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 9 FTLSLLLgttITLSSNHWVM--AWtglEINTLAILPLISKSHhPRAIEAATKYFLVQAAASALVLFSSMTNAWHTGQWDI 86
Cdd:PRK12650 119 FMAAMLL---LVLADDVVVLfvAW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSL 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 87 TQLTHPVS---SLVLTSAIAM--------KLGLVPFHFWFPEVMQGSSLLTGLLLSTLMKLPPIALL--FMTAQSLN--- 150
Cdd:PRK12650 192 SGILHSDVwaeKPGLTTVVAVliavaaftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLlrFSPVFHDVavw 271
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1998563282 151 SSLLVLMAILSAAVGGWMGLNQTQVRKILAFSSISHLGWMAIII 194
Cdd:PRK12650 272 NWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATI 315
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-194 |
1.33e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 40.68 E-value: 1.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 80 HTGQWDITQL-THPVSSLVLTSAIAM-------KLGLVPFHFWFPEVMQGSSLLTGLLLSTLMKLPPIALLFMTAQSLNS 151
Cdd:PRK12644 183 AAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFAD 262
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1998563282 152 S-----LLVLMAILSAAVGGWMGLNQTQVRKILAFSSISHLGWMAIII 194
Cdd:PRK12644 263 VpvwrpTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLV 310
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-194 |
1.71e-03 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 40.19 E-value: 1.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 50 PRAIEAATKYFLVQAAASALVLFSSMTNAWH----TGQWDITQL-THPVSSLVLTS-------AIAMKLGLVPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLlNLPLPPGVQYWlflaffiAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 118 VM-QGSSLLTGLLLSTLMKLPPIALL------FMTAQSLNSSLLVLMAILSAAVGGWMGLNQTQVRKILAFSSISHLGWM 190
Cdd:PRK05846 237 AHvQAPTAGSVLLAGILLKMGAYGLLrfslplFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFV 316
|
....
gi 1998563282 191 AIII 194
Cdd:PRK05846 317 TLGI 320
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
2.21e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 39.86 E-value: 2.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALVLFS-SMTNAwHTGQWDITQLTH--PVSSLVLT------SAIA 103
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMADLAGalAENPTVVTafgfvlLALA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 104 MKLGLVPFHFWFPEVMQGSSLLTGLLLS-TLMKLPPIALL----------FMTAQSLNSSLLVLmAILSAAVGGWMGLNQ 172
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAAPPVVTALLSgLVTKVAVYALIriyftvfggdFRFALGLGWLLAVL-ALLSMLVGSLAALGQ 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 173 TQVRKILAFSSISHLGWMAIIITYYPKLTLLN--FYL--YAVMTTAVFLA------------LNSMKAL--SLPTLMTAW 234
Cdd:PRK08375 293 DDVKRVLAYSTVSQMGYILLGLALLTPLALAAglLHLlhHALMKGALFLAagaievtygtrrLSELSGLgrRMPLTAAAF 372
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1998563282 235 TktpslsamllLTLLSLAGLPPLTGFLPKWLIIQELTKQDMAPAATIISLLSLLSLFFYLRLAY 298
Cdd:PRK08375 373 A----------VASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
92-268 |
2.36e-03 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 39.55 E-value: 2.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 92 PVSSLVLTSAIAMKLGLVPFhFWFPEVMQGSSLLTGLLLSTLMKLPPI-------ALLFMTAQSLNSSLLVLMAILSAAV 164
Cdd:PRK12663 207 TTIALLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTKVGIyalirvfTLLFPQERELLHPLLATMAAITMVI 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 165 GGWMGLNQTQVRKILAFSSISHLGWM--AIIITYYPKLTLLNFYLYAVMT--TAVFLALNSMKAL----SLPTLMTAWTK 236
Cdd:PRK12663 286 GALGALAYKDIRRIAGYQVISSIGFIllGLALGTPAGINGAIFYLVHDMVvkTALFLIAGSLVRLtgyrSLQYLGGLYRK 365
|
170 180 190
....*....|....*....|....*....|..
gi 1998563282 237 TPSLSAMLLLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12663 366 EPLFGALFLILIFAIGGLPPFSGFWGKVLLVQ 397
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-196 |
9.08e-03 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 37.65 E-value: 9.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALVLFSSMTNAWHTGQWDIT---QLTHPVSSLV---LTSAIAMKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSalsGLHGSLKYLVflgILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563282 107 GLVPFHFWFPEVMQGSSLLTGLLLSTLMKLPPIALLFMTAQSLNSS------LLVLMAILSAAVGGWMGLNQTQVRKILA 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIphvigyVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170
....*....|....*.
gi 1998563282 181 FSSISHLGWMAIIITY 196
Cdd:PRK06525 302 YSTITQLGYMFFGLSL 317
|
|
|