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Conserved domains on  [gi|2088232038|ref|YP_010133395|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Exaiptasia diaphana]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009636)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-327 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 164761  Cd Length: 327  Bit Score: 533.16  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038   1 MIMETINIIFKILIIVIPLLVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAA 80
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  81 PVFSFTLALIAWGIIPYDKGVVISDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIIT 160
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYERGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 161 VILCVGSLNITEIVLTQSSGIWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNNGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 241 ILMSCLTTILFFGGWLSPIVFIKGGPAWFGFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVASLLFG 320
Cdd:MTH00216  241 ILMSCLTTILFLGGWLSPIKYFKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFG 320


                  ....*..
gi 2088232038 321 LNGLPPS 327
Cdd:MTH00216  321 FNGPPPI 327
 
Name Accession Description Interval E-value
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-327 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 533.16  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038   1 MIMETINIIFKILIIVIPLLVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAA 80
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  81 PVFSFTLALIAWGIIPYDKGVVISDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIIT 160
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYERGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 161 VILCVGSLNITEIVLTQSSGIWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNNGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 241 ILMSCLTTILFFGGWLSPIVFIKGGPAWFGFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVASLLFG 320
Cdd:MTH00216  241 ILMSCLTTILFLGGWLSPIKYFKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFG 320


                  ....*..
gi 2088232038 321 LNGLPPS 327
Cdd:MTH00216  321 FNGPPPI 327
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 18-315 1.26e-139

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 397.96  E-value: 1.26e-139
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  18 PLLVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWGIIPY 97
Cdd:COG1005    21 FLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPF 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  98 DKGVVISDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNITEIVLTQ 177
Cdd:COG1005   101 GPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQ 180

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 178 SSGIWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFFGGWLS 257
Cdd:COG1005   181 AGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLG 260

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2088232038 258 PIVFIKG----GPAWFGFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVA 315
Cdd:COG1005   261 PFPILPLgglpGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTA 322
NADHdh pfam00146
NADH dehydrogenase;
18-315 1.20e-133

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 381.82  E-value: 1.20e-133
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  18 PLLVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWGIIPY 97
Cdd:pfam00146   8 PLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPF 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  98 DKGVVISDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNITEIVLTQ 177
Cdd:pfam00146  88 GPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQ 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 178 sSGIWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFFGGWLS 257
Cdd:pfam00146 168 -AGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLG 246

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2088232038 258 PivFIKGGPAWFGFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVA 315
Cdd:pfam00146 247 P--FPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
19-308 2.93e-69

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 219.19  E-value: 2.93e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  19 LLVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWGIIPY- 97
Cdd:NF040610   23 VFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVAIPFg 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  98 -------DKGVVISDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNI 170
Cdd:NF040610  103 aviingvEYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAGSLNI 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 171 TEIVLTQSSgIWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIL 250
Cdd:NF040610  183 VEIVEAQSP-IWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLVVLL 261

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2088232038 251 FFGGW-------LSPIVFIKGGPAWFGFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSL 308
Cdd:NF040610  262 FLGGWnlpgfvtDIPVLGIILPTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
 
Name Accession Description Interval E-value
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-327 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 533.16  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038   1 MIMETINIIFKILIIVIPLLVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAA 80
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  81 PVFSFTLALIAWGIIPYDKGVVISDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIIT 160
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYERGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 161 VILCVGSLNITEIVLTQSSGIWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNNGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 241 ILMSCLTTILFFGGWLSPIVFIKGGPAWFGFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVASLLFG 320
Cdd:MTH00216  241 ILMSCLTTILFLGGWLSPIKYFKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFG 320


                  ....*..
gi 2088232038 321 LNGLPPS 327
Cdd:MTH00216  321 FNGPPPI 327
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 18-326 1.78e-170

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 476.14  E-value: 1.78e-170
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  18 PLLVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWGIIPY 97
Cdd:MTH00054   14 PLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPY 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  98 DKGVVISDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNITEIVLTQ 177
Cdd:MTH00054   94 GEGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQ 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 178 sSGIWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFFGGWLS 257
Cdd:MTH00054  174 -KNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLV 252

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2088232038 258 PIVF--IKGGPAWFGFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVASLLFGLNGLPP 326
Cdd:MTH00054  253 ISGPtsYFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPP 323
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 18-315 1.26e-139

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 397.96  E-value: 1.26e-139
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  18 PLLVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWGIIPY 97
Cdd:COG1005    21 FLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPF 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  98 DKGVVISDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNITEIVLTQ 177
Cdd:COG1005   101 GPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQ 180

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 178 SSGIWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFFGGWLS 257
Cdd:COG1005   181 AGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLG 260

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2088232038 258 PIVFIKG----GPAWFGFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVA 315
Cdd:COG1005   261 PFPILPLgglpGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTA 322
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 18-326 1.83e-136

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 390.92  E-value: 1.83e-136
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  18 PLLVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWGIIPY 97
Cdd:MTH00029   19 PLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIVTM 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  98 DKGVVISDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNITEIVLTQ 177
Cdd:MTH00029   99 DQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQ 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 178 SSgIWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFFGGWLS 257
Cdd:MTH00029  179 RS-VWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGGWLS 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 258 PIVFIKGGPAWFGF---------------KTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVASLLFGLN 322
Cdd:MTH00029  258 PLDGIPTPPEAFSIfeqiasskssfwfftKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGILIGFN 337


                  ....
gi 2088232038 323 GLPP 326
Cdd:MTH00029  338 GVPP 341
NADHdh pfam00146
NADH dehydrogenase;
18-315 1.20e-133

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 381.82  E-value: 1.20e-133
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  18 PLLVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWGIIPY 97
Cdd:pfam00146   8 PLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPF 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  98 DKGVVISDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNITEIVLTQ 177
Cdd:pfam00146  88 GPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQ 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 178 sSGIWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFFGGWLS 257
Cdd:pfam00146 168 -AGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLG 246

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2088232038 258 PivFIKGGPAWFGFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVA 315
Cdd:pfam00146 247 P--FPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
18-317 2.23e-128

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 369.52  E-value: 2.23e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  18 PLLVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWGIIPY 97
Cdd:PRK06076   22 VVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPF 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  98 DKGVVISDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNITEIVLTQ 177
Cdd:PRK06076  102 GPELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQ 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 178 SSGiWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFFGGWLS 257
Cdd:PRK06076  182 FLS-WNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGGWLP 260

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2088232038 258 PIVFIKG--GPAWFGFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVASL 317
Cdd:PRK06076  261 PFPLGGGipGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLLTAAV 322
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 18-327 1.05e-127

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 367.68  E-value: 1.05e-127
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  18 PLLVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWGIIPY 97
Cdd:MTH00111   17 PILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPM 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  98 DKgvVISDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNITEIVLTQ 177
Cdd:MTH00111   97 PF--PLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQ 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 178 SSgIWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFfggwLS 257
Cdd:MTH00111  175 EP-LWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILF----LN 249

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2088232038 258 PiVFIKGGPAWFGF----KTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVASLLFGLNGLPPS 327
Cdd:MTH00111  250 P-STLNLPPELFTInlmtKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQ 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 18-326 6.36e-127

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 365.85  E-value: 6.36e-127
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  18 PLLVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWGIIPY 97
Cdd:MTH00134   18 PVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPM 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  98 DKGVVisDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNITEIVLTQ 177
Cdd:MTH00134   98 PYPVT--DLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQ 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 178 SSgIWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFFGGWLS 257
Cdd:MTH00134  176 ES-IWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHI 254

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2088232038 258 PIvFIKGGPAWFGFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVASLLFGLNGLPP 326
Cdd:MTH00134  255 PT-LPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPP 322
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 18-326 1.87e-126

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 364.33  E-value: 1.87e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  18 PLLVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWgiIPY 97
Cdd:MTH00071   17 PVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIW--TPL 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  98 DKGVVISDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNITEIVLTQ 177
Cdd:MTH00071   95 PMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQ 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 178 SSgIWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFFGG--- 254
Cdd:MTH00071  175 EF-MWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGStyn 253

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2088232038 255 ----WLSPIVFIkggpawfgFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVASLLFGLNGLPP 326
Cdd:MTH00071  254 hlqpELSTMNLM--------IKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPP 321
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 18-327 1.32e-124

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 359.67  E-value: 1.32e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  18 PLLVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWGIIPY 97
Cdd:MTH00040   16 PVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPV 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  98 DKGVVisDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNITEIVLTQ 177
Cdd:MTH00040   96 PTPTL--NVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQ 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 178 SsGIWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFFGGWLS 257
Cdd:MTH00040  174 N-GSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGGGSP 252

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 258 PIVFIKGGPAWFGFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVASLLFGLNGLPPS 327
Cdd:MTH00040  253 FNEIFPINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPPN 322
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 18-326 6.18e-124

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 357.78  E-value: 6.18e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  18 PLLVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWGIIPY 97
Cdd:MTH00104   12 PILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMWIPLPM 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  98 DKGVVisDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNITEIVLTQ 177
Cdd:MTH00104   92 PYPLI--NMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQ 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 178 SSgIWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFFGGWLS 257
Cdd:MTH00104  170 EH-LWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGAFHN 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2088232038 258 PIvFIKGGPAWFGFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVASLLFGLNGLPP 326
Cdd:MTH00104  249 PY-MPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPP 316
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 18-326 1.36e-118

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 344.20  E-value: 1.36e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  18 PLLVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWGIIPY 97
Cdd:MTH00218   14 PVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPL 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  98 DKGvvISDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNITEIVLTQ 177
Cdd:MTH00218   94 PFS--LINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQ 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 178 SsGIWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFFGGWLS 257
Cdd:MTH00218  172 E-TIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLT 250

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2088232038 258 PIvfikggpaWFGFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVASLLFGLNGLPP 326
Cdd:MTH00218  251 TI--------NLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 20-318 4.46e-118

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 342.62  E-value: 4.46e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  20 LVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWGIIPYDk 99
Cdd:MTH00143   15 LLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSY- 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 100 gVVISDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNITEIVLTQSS 179
Cdd:MTH00143   94 -FSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFS 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 180 gIWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFFGGWlspI 259
Cdd:MTH00143  173 -VWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGS---S 248

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2088232038 260 VFIKGGPAWFGFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVASLL 318
Cdd:MTH00143  249 VLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 20-319 2.25e-112

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 328.27  E-value: 2.25e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  20 LVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWGIIPYDK 99
Cdd:MTH00193   16 LVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYLF 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 100 GvvISDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNITEIVLTQSS 179
Cdd:MTH00193   96 N--LISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKY 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 180 gIWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFFGGWLSPI 259
Cdd:MTH00193  174 -IWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSL 252

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 260 VFIkggpawfgFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVASLLF 319
Cdd:MTH00193  253 LFY--------LKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKI 304
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 19-319 7.21e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 321.60  E-value: 7.21e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  19 LLVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWGIIPYd 98
Cdd:MTH00225   14 LLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLYPS- 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  99 kGVVISDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNITEIVLTQS 178
Cdd:MTH00225   93 -MFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQK 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 179 SgIWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFFGG--WL 256
Cdd:MTH00225  172 Y-FWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGGffVT 250

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2088232038 257 SPIVFIkggpawfgFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVASLLF 319
Cdd:MTH00225  251 IDLFLI--------LKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 18-323 1.88e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 315.53  E-value: 1.88e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  18 PLLVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWGIIPY 97
Cdd:MTH00195   14 PVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPS 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  98 DKGVviSDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNITEIVLTQ 177
Cdd:MTH00195   94 PFGF--SSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQ 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 178 SSgIWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFFGGWLS 257
Cdd:MTH00195  172 GF-SWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGGGGT 250

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2088232038 258 PIVFikggpawfgFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVASLLFGLNG 323
Cdd:MTH00195  251 IIVA---------LKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 20-319 4.04e-93

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 279.36  E-value: 4.04e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  20 LVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWGIIPYDK 99
Cdd:MTH00010   17 LLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKH 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 100 GVVIsdLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNITEIVLTQSS 179
Cdd:MTH00010   97 PSFF--LKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQYS 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 180 GIWFFFPlfPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMsCLTTILFFGGWLSPI 259
Cdd:MTH00010  175 WILLMII--PLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIM-SLFTSVFFTSFIPSI 251

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 260 VFIkggPAWFGFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVASLLF 319
Cdd:MTH00010  252 FIS---DLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMF 308
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
19-308 2.93e-69

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 219.19  E-value: 2.93e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  19 LLVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWGIIPY- 97
Cdd:NF040610   23 VFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVAIPFg 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  98 -------DKGVVISDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNI 170
Cdd:NF040610  103 aviingvEYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAGSLNI 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 171 TEIVLTQSSgIWFFFPLFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIL 250
Cdd:NF040610  183 VEIVEAQSP-IWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLVVLL 261

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2088232038 251 FFGGW-------LSPIVFIKGGPAWFGFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSL 308
Cdd:NF040610  262 FLGGWnlpgfvtDIPVLGIILPTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 19-319 3.01e-64

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 204.75  E-value: 3.01e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  19 LLVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWGIIPYd 98
Cdd:MTH00090    9 ILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPY- 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  99 kGVVISDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLniteiVLTQS 178
Cdd:MTH00090   88 -FFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSF-----SFVSS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 179 SGIWFFFPLFPaammFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFFGgwlsp 258
Cdd:MTH00090  162 FSLSLFVIYLP----FLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK----- 232

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2088232038 259 ivfikggpawFGFKTSFIIL-LFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILVASLLF 319
Cdd:MTH00090  233 ----------FSFLMLFLIFsLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ndhA CHL00032
NADH dehydrogenase subunit 1
 30-317 2.49e-63

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 204.80  E-value: 2.49e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  30 ERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKELVIPHYANLFIYVAAPVFSFTLALIAWGIIPYDKGVVISDLKIG 109
Cdd:CHL00032   51 EREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPFGYHLVLADLSIG 130

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 110 ILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNITEIVLTQSS-GIWFFF--- 185
Cdd:CHL00032  131 VFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKyGFWGWNlwr 210

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 186 -PLfpAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFFGGWLSPIVFIKg 264
Cdd:CHL00032  211 qPI--GFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSIPYIF- 287

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2088232038 265 GPAWFGFKTSFIIL--------------LFVWV----RASFPRMRYDQLMALLWKSYLPLSLAFVILVASL 317
Cdd:CHL00032  288 IPELFEINKTGGVFgttigifitlaktyLFLFIsittRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSF 358
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 20-314 3.11e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 166.25  E-value: 3.11e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  20 LVAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPLADGIKLFTKelviphyANLFIYVAAPVFS----FTLALIA-WGI 94
Cdd:MTH00058   15 LLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVK-------FKVYGFQSRSWFSlfgvFLLVLLVvFYC 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  95 IPYDKGVVISDLKIGILFTLAVSSISVYAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNITEIv 174
Cdd:MTH00058   88 FIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDF- 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 175 ltqSSGIWFFFPLFPAA-MMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFFG 253
Cdd:MTH00058  167 ---YYSGWLSVLLFPLIyILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFG 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2088232038 254 GWLSPIVFIkggpawfgfktsFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILV 314
Cdd:MTH00058  244 GGFVSIMLL------------FHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVI 292
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
31-314 9.56e-37

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 133.77  E-value: 9.56e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038  31 RKVLGYMQARKGPnvvgvyGLLQPLADGIKLFTKELVIPHYANlFIYVAAPVFSFTLALIAWGIIP---YDKGVVISDLK 107
Cdd:COG0650    26 RKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVALAAMLLAALLVPvltTGPPLSFSGDL 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 108 IGILFTLAVSSIsvyAILMSGWASQSKYAFLGAIRAAAQMISYEVSIGLIIITVILCVGSLNITEIVLTQSSGIWFFFP- 186
Cdd:COG0650    99 IVLVYLLALARF---FLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAAHGPLLLSp 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232038 187 -LFPAAMMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFFGGWLSPIVFIkgG 265
Cdd:COG0650   176 sLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLFLPWGIALTLLL--A 253

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 2088232038 266 PAWFGFKTSFIILLFVWVRASFPRMRYDQLMALLWKSYLPLSLAFVILV 314
Cdd:COG0650   254 LLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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