|
Name |
Accession |
Description |
Interval |
E-value |
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
1-498 |
0e+00 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 953.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 1 MSYFPWLTILVVLPIFAGSLIFFLPHKGNKIVRWYTISICLLEFLLMTYAFCYHFQLEDPLIQLKEDYKWIDVFDFHWRL 80
Cdd:CHL00011 1 MNYFPWLTIIVVLPIFAGSLIFFLPHRGNKVIRWYTLCICLLELLLTTYAFCYHFQLDDPLIQLKEDYKWINFFDFHWRL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 81 GIDGLSLGSILLTGFITTLATLAAWPITRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRR 160
Cdd:CHL00011 81 GIDGLSIGPILLTGFITTLATLAAWPVTRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 161 LYSATKFILYTAGGSIFFLIGVLGMGLYGSNEPGLDLERLINQSYPETLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGE 240
Cdd:CHL00011 161 LYSATKFILYTAGGSIFLLIGVLGMGLYGSNEPTLNFETLANQSYPVALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 241 AHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGI 320
Cdd:CHL00011 241 AHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 321 GSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELVV 400
Cdd:CHL00011 321 GSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIV 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 401 FFGLITSPKFLLMPKTLITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNANFVDSGPRELFILICIFLPVIGIGIYPD 480
Cdd:CHL00011 401 FFGIITSQKYLLMPKILITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNSYFFDSGPRELFISICILLPVIGIGIYPD 480
|
490
....*....|....*...
gi 2172622115 481 FVLSLSADRVEALLSNYY 498
Cdd:CHL00011 481 FVLSLSVDKVEAILSNYF 498
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
1-493 |
0e+00 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 568.95 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 1 MSYFPWLTILVVLPIFAGSLIFFLPHKGN-KIVRWYTISICLLEFLLMTYAFCYHFQLEDPLIQLKEDYKWIDVFDFHWR 79
Cdd:PRK02546 3 LANFPWLTTIILFPIVAALLIPFIPDKGDgKTVRWYALIVGLIDFLITVYAFYTGYDFSNPGLQLVESYSWLPQLGLTWS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 80 LGIDGLSLGSILLTGFITTLATLAAWPITRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKR 159
Cdd:PRK02546 83 VGADGLSMPLILLTGFITTLAVLAAWPVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKK 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 160 RLYSATKFILYTAGGSIFFLIGVLGMGLYGSNePGLDLERLINQSYPETLEILLYFGFLIAYAVKLPIIPLHTWLPDTHG 239
Cdd:PRK02546 163 RQYAATKFILYTAGSSLFILLAALAMAFYGDT-PTFDMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHG 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 240 EAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIG 319
Cdd:PRK02546 242 EATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIG 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 320 IGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELV 399
Cdd:PRK02546 322 IGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELM 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 400 VFFGLITSPKFLLMPKTLITFVMAIGMILTPIYLLSMLRQMFYG---YKLfnVPNANFVDSGPRELFILICIFLPVIGIG 476
Cdd:PRK02546 402 VFVGFATSDAYTLPFRVVVVFLAAVGVILTPIYLLSMLREIFFGpenKEL--VSHEKLVDAEPREVFIIACLLVPIIGIG 479
|
490
....*....|....*..
gi 2172622115 477 IYPDFVLSLSADRVEAL 493
Cdd:PRK02546 480 LYPKLVTQSYDATTNQL 496
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
27-479 |
0e+00 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 552.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 27 KGNKIVRWYTISICLLEFLLMTYAFCYHFQLEDPLIQLKEDYKWIDVFDFHWRLGIDGLSLGSILLTGFITTLATLAAWP 106
Cdd:PRK12561 2 KEGKTVRWYALGVGLADFALMCYVFWQHYDPSSSSLQLVERYAWLPQIGLEWSLGVDGLSMPLVLLSGLITTLSIFASWK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 107 ITRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRLYSATKFILYTAGGSIFFLIGVLGMG 186
Cdd:PRK12561 82 VTRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 187 LYGSNePGLDLERLINQSYPETLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINM 266
Cdd:PRK12561 162 LSGDT-FTFDLAELGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 267 ELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLF 346
Cdd:PRK12561 241 QMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALF 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 347 FLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSPKFLLMPKTLITFVMAIGM 426
Cdd:PRK12561 321 FLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFLGITSSDVYSSTFRTITILLAAVGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2172622115 427 ILTPIYLLSMLRQMFYGYKLFNVP-NANFVDSGPRELFILICIFLPVIGIGIYP 479
Cdd:PRK12561 401 ILTPIYLLSMLRRVFYGPRSELLPaLAVVEDAKPRELFIALSLLVPIIGIGFYP 454
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
4-497 |
1.87e-160 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 464.17 E-value: 1.87e-160
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 4 FPWLTILVVLPIFAGSLIFFLPHKGNKIVRWYTISICLLEFLLMTYAFcYHFQLEDPLIQLKEDYKWIDVFDFHWRLGID 83
Cdd:COG1008 3 MPLLSLLILLPLLGALLLLLLPRRNARLARWVALAVSLLTLLLSLYLL-AGFDPGTGGFQFVESYPWIPSLGISYHLGVD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 84 GLSLGSILLTGFITTLATLAAWP-ITRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRLY 162
Cdd:COG1008 82 GISLPLVLLTALLTPLAILASWNeIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGERRIY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 163 SATKFILYTAGGSIFFLIGVLGMGLYgSNEPGLDLERLINQSYPETLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAH 242
Cdd:COG1008 162 AAIKFFLYTLAGSLLMLVAILALYFL-AGALTFDIAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 243 YSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGS 322
Cdd:COG1008 241 TAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 323 ITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFF 402
Cdd:COG1008 321 LNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 403 GLITSPkfllmpkTLITFVMAIGMILTPIYLLSMLRQMFYGYklFNVPNANFVDSGPRELFILICIFLPVIGIGIYPDFV 482
Cdd:COG1008 401 GAFQVN-------PWLAILAALGLILTAAYLLWMYQRVFFGP--LKEELAELPDLNPRELAVLAPLAALILLLGLYPQPL 471
|
490
....*....|....*
gi 2172622115 483 LSLSADRVEALLSNY 497
Cdd:COG1008 472 LDLIEPSVEALLARV 486
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
7-495 |
2.05e-135 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 400.08 E-value: 2.05e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 7 LTILVVLPIFAGSLIFFLPHKGNKIVRWYTISICLLEFLLMTYAFcYHFQLEDPLIQLKEDYKWIDVFDFHWRLGIDGLS 86
Cdd:TIGR01972 1 LSLLIFLPLIGALLILLLPSNKDGKARWIALVVALATLLLSLLLL-FQFDPTGSGFQFTEDIPWIPALGISYHLGVDGIS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 87 LGSILLTGFITTLATLAAWP-ITRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRLYSAT 165
Cdd:TIGR01972 80 LLLVLLTALLTLLAILASWEsIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAM 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 166 KFILYTAGGSIFFLIGVLGMGLYGSNEpgLDLERLINQSYPETLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYST 245
Cdd:TIGR01972 160 KFFLYTLAGSLLMLLAILGLYFLGGGT--FDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAG 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 246 CMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITN 325
Cdd:TIGR01972 238 SVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNE 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 326 IGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLI 405
Cdd:TIGR01972 318 LGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSF 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 406 TSpkfllmpKTLITFVMAIGMILTPIYLLSMLRQMFYGyKLFNVPNANFVDSGPRELFILICIFLPVIGIGIYPDFVLSL 485
Cdd:TIGR01972 398 KV-------NPVVAFLAALGIVLAAAYMLTLYKRVFFG-ELSNPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLLDL 469
|
490
....*....|
gi 2172622115 486 SADRVEALLS 495
Cdd:TIGR01972 470 TEPSVNNLLS 479
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
4-500 |
4.04e-131 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 389.56 E-value: 4.04e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 4 FPWLTILVVLPIFAGSLIFFLPHKGNKIVRWYTISICLLEFLLMTYAFCyHFQLEDPLIQLKEDYKWIDVFDFHWRLGID 83
Cdd:PRK05846 3 WPLLSLLIFLPLIGGLLVLLTERFGARLARWIALIGTLLTLLLSLVLWI-GFDSSNAGFQFVEKHPWIPRFGISYHLGVD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 84 GLSLGSILLTGFITTLATLAAW-PITRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRLY 162
Cdd:PRK05846 82 GISLLLVVLTALLTPLAVLASWeEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGGKNRIY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 163 SATKFILYTAGGSIFFLIGVLGMGLYGSNEPG-LDLERLINQSYPETLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEA 241
Cdd:PRK05846 162 AATKFFLYTLLGSLLMLVAIIYLVVVYYNATGtFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVQA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 242 HYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIG 321
Cdd:PRK05846 242 PTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIF 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 322 SITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELVVF 401
Cdd:PRK05846 322 AGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 402 FGLITSpkfllmpKTLITFVMAIGMILTPIYLLSMLRQMFYGYKlfNVPNANFVDSGPRELFILICIFLPVIGIGIYPDF 481
Cdd:PRK05846 402 LGSFQV-------NPVIAFIATTGLILAAVYSLWLYQRVMFGPV--KNEVAKLKDLNGRELLILLPLVALLLLLGVYPKP 472
|
490
....*....|....*....
gi 2172622115 482 VLSLSADRVEALLSNYYPK 500
Cdd:PRK05846 473 LLDVIHPSVENLLQWVAPS 491
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
7-495 |
2.35e-88 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 279.66 E-value: 2.35e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 7 LTILVVLPIFAGSLIFFLPHKGN-KIVRWYTISICLLEFLLmTYAFCYHFQLEDPLIQLKEDYKWIDVFDFHWRLGIDGL 85
Cdd:PRK06473 2 LSALIWIPLLGAILIGFWPSGINgKLARSVALVIASVLLLL-SLVLAFQFDPGNPNQQFTEFIPWIDSLGLSYHLGVDGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 86 SLGSILLTGFITTLATLAAWPITRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRLYSAT 165
Cdd:PRK06473 81 SLPLLVLNSLLTLIAIYSSDESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQRRGYAAT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 166 KFILYTAGGSIFFLIGVLGMGlYGSNEPGLDLERLINQSYPETLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYST 245
Cdd:PRK06473 161 KFLLYTAISGILILVSFLGLV-WLSGASSFDYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 246 CMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITN 325
Cdd:PRK06473 240 SVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATP 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 326 IGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIP---MPKIFTMFSSFSMASLALPGMSGFVAELVVFF 402
Cdd:PRK06473 320 LSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPergLPITGSLMILGVMASAGIPGMVGFIAEFLVFR 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 403 GlitspKFLLMPktLITFVMAIGMILTPIYLLSMLRQMFYGY---KLFNVPNANFVDSGPRELFILICIFLpvigiGIYP 479
Cdd:PRK06473 400 G-----SFPIFP--VQTLLCMIGTGLTAVYFLLLVNRVFFGRltaELSNLPRVLWSERLPALVLAVLIVVL-----GIQP 467
|
490
....*....|....*.
gi 2172622115 480 DFVLSLSADRVEALLS 495
Cdd:PRK06473 468 SWLVRWTEPTATALLT 483
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
7-443 |
4.32e-77 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 250.40 E-value: 4.32e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 7 LTILVVLPIFAGSLIFFLPHKgNKIVRWYTISICL-LEFLLMTYAFCYHFQLEDPLIQLKEDYKWIDVFDFHWRLGIDGL 85
Cdd:PRK07363 2 LSVLLWLPILGAIIIGFFPGN-LPSARLRQITLVFaVLVLAWSLFLLTQFDLSDPGMQFQEYLPWNEPLGLSYSLGVDGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 86 SLGSILLTGFITTLATLAAWPITRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRLYSAT 165
Cdd:PRK07363 81 SLPLLVLNSLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEKRGYASI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 166 KFILYTAGGSIFFLIGVLGMGLYgSNEPGLDLERLINQSYPETLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYST 245
Cdd:PRK07363 161 KFLIYTAVSGLLVLAAFLGIVWL-SGSTSFDYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 246 CMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITN 325
Cdd:PRK07363 240 AILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQ 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 326 IGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIP---MPKIFTMFSSFSMASLALPGMSGFVAELVVFF 402
Cdd:PRK07363 320 LSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 2172622115 403 GlitspKFLLMPKTLITFVMAIGmiLTPIYLLSMLRQMFYG 443
Cdd:PRK07363 400 G-----SFSTFPIPTLLCIVASG--LTAVYFVILLNRTCFG 433
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-440 |
6.03e-58 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 198.06 E-value: 6.03e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 1 MSYFPWLtiLVVLPIFAGSLIFFLPHKGnKIVRWYTISICLLEFLLMTYAFCYHFQLEDPLIQLkedYKWIDVFDFHwrL 80
Cdd:COG0651 1 MSHLLIL--PVLLPLLAAALLLLLGRRR-RLQRALSLLASLALLALALALLLQVLAGGPLVYAL---GGWPAPFGIV--L 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 81 GIDGLSLGSILLTGFITTLATLAAWP---ITRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGG 157
Cdd:COG0651 73 VADRLSALFLLLTALVALAVLLYSIGymrHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGT 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 158 KRRLYSATKFILYTAGGSIFFLIGVLGM-GLYGSnepgLDLERLIN--QSYPETLEILLYFGFLIAYAVKLPIIPLHTWL 234
Cdd:COG0651 153 KEALRAGLKYLILNLVGSALFLLGVGLLyGATGT----LNMADLAArlAELDPGLLLAAFALLLVGFGIKAALFPLHFWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 235 PDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLF-SPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHM 313
Cdd:COG0651 229 PDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPALFlGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQI 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 314 GFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSG 393
Cdd:COG0651 309 GYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 2172622115 394 FVAELVVFFGLITSPKFLLMpktlitFVMAIGMILTPIYLLSMLRQM 440
Cdd:COG0651 389 FVSKWLLLQAALEAGAWLLA------AVLLLSSLLTLAYFVRIFGRA 429
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
6-485 |
1.08e-53 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 187.96 E-value: 1.08e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 6 WLTILVVLPIFAGSLIFFLPHKGNKIVRWYTISICLLEFLLMTYAFCYHFQleDPLIQLKEDYKWI--DVFDFHWR---L 80
Cdd:MTH00204 2 GLSLIFLILFMGIINVMGVPRENSVKLKKRALEWSLAILFSTLVLWGAFDG--EGQFQFINLIEWIisPTLNFQWGplvF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 81 GIDGLSLGSILLTGFITTLATLAAW-PITRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKR 159
Cdd:MTH00204 80 AVDGVSLFFILLTTLLIPICILISWkSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSRE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 160 -RLYSATKFILYTAGGSIFFLIGVLGmgLYgSNEPGLDLERLINQSYPETLEILLYFGFLIAYAVKLPIIPLHTWLPDTH 238
Cdd:MTH00204 160 eKVRASYYFFFYTFAGSVFMLLGIFQ--LY-SITGTTDYQILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAH 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 239 GEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFIII 318
Cdd:MTH00204 237 VEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 319 GIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAEl 398
Cdd:MTH00204 317 GLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGE- 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 399 vvFFGLITSPKFLLMPKTLITFvmaiGMILTPIYLLSMLRQMFYG----YKLFNvpnanfVDSGPRELFILICIFLPVIG 474
Cdd:MTH00204 396 --FFSLLAAFEYSLGLGVLVTS----GMVWSAAYSLYLYNRISFGggsnYLLFS------RDLNRRELLAILPLIIAIFL 463
|
490
....*....|.
gi 2172622115 475 IGIYPDFVLSL 485
Cdd:MTH00204 464 LGIVPFIIIDL 474
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
80-485 |
2.01e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 166.25 E-value: 2.01e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 80 LGIDGLSLGSILLTGFITTLATLAAW-PITRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGK 158
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWhSVKYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSR 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 159 R-RLYSATKFILYTAGGSIFFLIGVLGM-GLYGSNepglDLERLINQSY--PETLEILLYFGFLIAYAVKLPIIPLHTWL 234
Cdd:MTH00226 178 EeKMQAAYYFFFYTLIGSVLMLLCLFSLyNIHGTT----DYLTLASCSHvvSEQTQKWIFLGIFLAMAVKIPIFPFHIWL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 235 PDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMG 314
Cdd:MTH00226 254 PKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 315 FIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGF 394
Cdd:MTH00226 334 LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 395 VAElvvFFGLITSPKFllmpKTLITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNANfvDSGPRELFILICIFLPVIG 474
Cdd:MTH00226 414 IGE---YLSILSSFNW----NPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFAR--DVNRREFYITASMVFFAFL 484
|
410
....*....|.
gi 2172622115 475 IGIYPDFVLSL 485
Cdd:MTH00226 485 IGIYPIFILEV 495
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
80-484 |
8.63e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 158.29 E-value: 8.63e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 80 LGIDGLSLGSILLTGFITTLATLAAW-PITRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGK 158
Cdd:MTH00217 76 FAVDGISIFFLILTALLTPICILISWnSIKFLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSR 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 159 R-RLYSATKFILYTAGGSIFFLIGVLGmgLYgSNEPGLDLERLINQSYPETLEILLYFGFLIAYAVKLPIIPLHTWLPDT 237
Cdd:MTH00217 156 EeKVQASYYFFFYTFIGSVFMLLGIFT--LY-SYAGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQA 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 238 HGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFII 317
Cdd:MTH00217 233 HVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVT 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 318 IGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAE 397
Cdd:MTH00217 313 LGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGE 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 398 lvvFFGLITSPKFllmpkTLITFVMA-IGMILTPIYLLSMlrqmfYGYKLFNVPNANFV---DSGPRELFILICIFLPVI 473
Cdd:MTH00217 393 ---FLSLLAAFEY-----SYIVGVLAsLGMVLSAGYSIYL-----YNRVCFGAPSKYLYfsrDLNRREFYVLLPLVFLIY 459
|
410
....*....|.
gi 2172622115 474 GIGIYPDFVLS 484
Cdd:MTH00217 460 LMGIFPFIIID 470
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
80-482 |
3.09e-41 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 153.56 E-value: 3.09e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 80 LGIDGLSLGSILLT------GFITTLATLAAWPITRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLS 153
Cdd:MTH00206 55 LSYDPLSSPLVILScwllplMFLASQNHMKNEPINRQ-RIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLIT 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 154 MWG-GKRRLYSATKFILYTAGGSIFFLIGVLGMGLYGSNEPGLDLERLINQSYpetLEILLYFGFLIAYAVKLPIIPLHT 232
Cdd:MTH00206 134 RWGnQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSKLTTW---NNNLWWLACILAFLVKLPLYGVHL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 233 WLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPwLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSH 312
Cdd:MTH00206 211 WLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYF-FIILGLWGSIMTSSICLRQTDLKSLIAYSSVSH 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 313 MGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMS 392
Cdd:MTH00206 290 MSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFP 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 393 GFVAELVVFFGLITSPKFLLmpktlitFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPnaNFVDSGPRELFILICIFLPV 472
Cdd:MTH00206 370 NLFGELLIITSLFSWSNFTL-------PLLGLGFLFTAIYSLYMFVMTQHGKTPNHLL--SLSPSSTREHLLLFLHLFPV 440
|
410
....*....|
gi 2172622115 473 IGIGIYPDFV 482
Cdd:MTH00206 441 ILLILNPNLI 450
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
80-494 |
1.15e-39 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 149.64 E-value: 1.15e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 80 LGIDGLSLGSILLTGFITTLATLAAWPITR-NSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGK 158
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAIGYGEhRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 159 RRLYSATKFILYTAGGSIFFLIGVlGM--GLYGSnepgLDLErLINQSYPETLEILLYFGF-LIAYAVKLPIIPLHTWLP 235
Cdd:PRK08375 153 RALAAARKYLIVGLIGSTFLLIGV-GLlyGVTGT----LNMA-DLAGALAENPTVVTAFGFvLLALALKAAVFPLHTWLP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 236 DTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPW---LVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSH 312
Cdd:PRK08375 227 RAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLgwlLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQ 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 313 MGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPkifTMFSSFSMASLALPGM- 391
Cdd:PRK08375 307 MGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMP---LTAAAFAVASLSLIGVp 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 392 --SGFVAELVVFFGLITSPKFLLMpktlitFVMAIGMILTpiyLLSMLRQMFYGYKLFNVPNANFVDSGPRELFILICIF 469
Cdd:PRK08375 384 ptSGFVSKWYLVVGAVEAGQWLVL------AVLLASSLLA---LLYFLRIWYRAFFGPPPPGSEAPKQEAPLGMLAPSLA 454
|
410 420
....*....|....*....|....*..
gi 2172622115 470 LPVI--GIGIYPDFVLSLSADRVEALL 494
Cdd:PRK08375 455 LALLslLLGIYAGPLLQLADAAAAGLL 481
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
131-404 |
1.03e-37 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 139.76 E-value: 1.03e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 131 SRDLLLFFIMWELELIPVYLLLSMWGGK-RRLYSATKFILYTAGGSIFFLIGVLGMGLYGSNEPGLDLERLINQSYPETL 209
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSpRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 210 EILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLfSPWLVIIGAIQII 289
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFI-QQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 290 YAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTAS-DRMRLVYLEELGGIS 368
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSVIyRRVHTRNIRDYGGLA 239
|
250 260 270
....*....|....*....|....*....|....*.
gi 2172622115 369 IPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGL 404
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAA 275
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
95-437 |
6.45e-34 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 133.01 E-value: 6.45e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 95 FITTLATLAAwpitrnsrlfyFLMLAmysgqiglFSSRDLLLFFIMWELELIPVYLLLSMWGG-KRRLYSATKFILYTAG 173
Cdd:MTH00124 95 FLTTLILLQT-----------FLILA--------FSATELTLFYIMFEATLIPTLILITRWGNqPERLSAGTYFLFYTLI 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 174 GSIFFLIGVLGMGLYgSNEPGLDLERLINQSYPETL-EILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGI 252
Cdd:MTH00124 156 SSLPLLIAILYLHNQ-TGTLSLPMLQLTHPTLTNSWtNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAI 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 253 LLKMGAYGLIRINMELLPHAHYLFSPWLVII--GAIQiiyAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNG 330
Cdd:MTH00124 235 LLKLGGYGIIRITLLLPPLSNTLHYPFLTLAlwGALM---TSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSG 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 331 AILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELvvffgLITSPKF 410
Cdd:MTH00124 312 AMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGEL-----TIMTSLF 386
|
330 340
....*....|....*....|....*..
gi 2172622115 411 LLMPKTLITFvmAIGMILTPIYLLSML 437
Cdd:MTH00124 387 NWSPTTIILT--GLATLITASYTLYMF 411
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
80-437 |
2.15e-33 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 131.58 E-value: 2.15e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 80 LGIDGLSLGSILLTGFITTLATLAAW------PITRNSrlFYFLMLAMYsgQIGL---FSSRDLLLFFIMWELELIPVYL 150
Cdd:MTH00068 56 FGIDQISSPLLILTCWLLPLMILASQnhlknePINRQR--TYISMLIIL--QLTLilaFSATELILFYIFFEATLIPTLI 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 151 LLSMWGG-KRRLYSATKFILYTAGGSIFFLIGVLGM-GLYGSNEPGLdLERLINQSYPETLEILLYFGFLIAYAVKLPII 228
Cdd:MTH00068 132 IITRWGNqEERLNAGTYFLFYTLAGSLPLLIALLILqNSLGSLSLIL-LELMSPMQLMTYTNKIWWLACLLAFMVKMPLY 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 229 PLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPwLVIIGAIQIIYAASTSLGQRNFKKRIAYS 308
Cdd:MTH00068 211 GLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKELSYP-FIILALWGVLMTSLICLRQTDLKSLIAYS 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 309 SVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLAL 388
Cdd:MTH00068 290 SVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMAL 369
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2172622115 389 PGMSGFVAELVVFFGLitspkFLLMPKTLItfVMAIGMILTPIYLLSML 437
Cdd:MTH00068 370 PPSPNLWGELTIMVSL-----FNWSNWTIL--ITGLGTLITAAYTLYMF 411
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
80-437 |
1.74e-32 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 129.31 E-value: 1.74e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 80 LGIDGLSLGSILLTGFITTLATLA------AWPITRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLS 153
Cdd:MTH00127 57 MATDPLSTPLLVLTCWLLPLMILAsqnhtaPEPINRQ-RMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIIT 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 154 MWGGK-RRLYSATKFILYTAGGSIFFLIGVLGMGLYGSNEPGLDLERLINQSYPETLEILLYFGFLIAYAVKLPIIPLHT 232
Cdd:MTH00127 136 RWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 233 WLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWlVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSH 312
Cdd:MTH00127 216 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPF-IILALWGIIMTGSICLRQTDLKSLIAYSSVSH 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 313 MGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMS 392
Cdd:MTH00127 295 MGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLP 374
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2172622115 393 GFVAELVvffglITSPKFLLMPKTLItfVMAIGMILTPIYLLSML 437
Cdd:MTH00127 375 NLMGELM-----IITSLFNWSPWTLA--LTGLGTLITAGYSLYMF 412
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
78-483 |
3.50e-32 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 128.17 E-value: 3.50e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 78 WRLGIDGLSLGSILLTGFITTLATLAAWPI-----TRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLL 152
Cdd:MTH00044 55 LSLATDSLSSPLIILSCWLAPLSLLASINHlsnnsPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILI 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 153 SMWGG-KRRLYSATKFILYTAGGSIFFLIGVLGMGLYGSNEPGLDLERLINQSYPETLEILLYFGFLIAYAVKLPIIPLH 231
Cdd:MTH00044 135 TRWGAqKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFH 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 232 TWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMellphahYLFSPWLVIIGAIQIIY----AASTS---LGQRNFKKR 304
Cdd:MTH00044 215 LWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLIN-------LFSLPSANNISFILIVFccwgALITSiicLRQTDLKAL 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 305 IAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMA 384
Cdd:MTH00044 288 IAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAA 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 385 SLALPGMSGFVAELVVFFGLITSPKFLLmpktlitFVMAIGMILTPIYLLSMLrQMFYGYKLFNVpNANFVDSGPRELFI 464
Cdd:MTH00044 368 NLGLPPLPNLIGELLIISSIISWSILSF-------PIIGLATVFGAIYSLLIY-QLTNSGSFPSW-ISNVSPISSREHLL 438
|
410
....*....|....*....
gi 2172622115 465 LICIFLPVIGIGIYPDFVL 483
Cdd:MTH00044 439 IFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
80-421 |
1.36e-31 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 125.72 E-value: 1.36e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 80 LGIDGLSLGSILLTGFITTLATLAAWP---ITRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWG 156
Cdd:MTH00150 20 FSVDSMSSLLISLSLWISGLMMLASQKsvkLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLILGWG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 157 GK-RRLYSATKFILYTAGGSIFFLIGVLGMGL-YGSNEPGLDLERLINQSYPETLEILLYFGFLiayaVKLPIIPLHTWL 234
Cdd:MTH00150 100 YQpERLQAGMYMMLYTVGASLPLLLVILWMSSsYGSSFMLLISSLRKLLSSMGLWGLLVFLAFL----VKLPMYPFHLWL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 235 PDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELlphaHYLFSPWLVIIGAIQI---IYAASTSLGQRNFKKRIAYSSVS 311
Cdd:MTH00150 176 PKAHVEAPVAGSMILAGILLKLGGYGILRMMMVF----SLSSSSFSIFLISLSLwggVLTSLICLRQSDVKSLIAYSSVG 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 312 HMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGM 391
Cdd:MTH00150 252 HMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPS 331
|
330 340 350
....*....|....*....|....*....|
gi 2172622115 392 SGFVAELVVFFGLITSPKFLLMPKTLITFV 421
Cdd:MTH00150 332 LNLLSEIMIFPSLISYSPWFFVPLGLMVFL 361
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
68-473 |
4.76e-28 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 116.02 E-value: 4.76e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 68 YKWIDVFDFHWRLGIDGLSLGSILLTGFITTLATLAAWPITRN---SRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELE 144
Cdd:MTH00163 40 SLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKnnySNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESS 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 145 LIPVYLLLSMWGGK-RRLYSATKFILYTAGGSIFFLIGVLgmgLYGSNEPGLDLERLINQSYpetLEILLYFGFLIAYAV 223
Cdd:MTH00163 120 LIPTLFLILGWGYQpERLQAGIYLLFYTLFASLPLLVGIF---YLYNNSGSLSFFLLNFFGS---LNFLWYLSMILAFLV 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 224 KLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKK 303
Cdd:MTH00163 194 KMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRV-MSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKS 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 304 RIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRM--RLVYLEElGGISIpMPKIFTMFSSF 381
Cdd:MTH00163 273 LIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLgsRSLLINK-GLLNF-MPSMSLWWFLL 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 382 SMASLALPGMSGFVAELVVFFGLITSPKFLLMPKTLITFVMAigmiLTPIYLLSMLRQMFYGYKLFNVPNANFvdsgpRE 461
Cdd:MTH00163 351 SSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSA----AYSLYLYSYSQHGKYYSGLYSCSSGKV-----RE 421
|
410
....*....|..
gi 2172622115 462 LFILICIFLPVI 473
Cdd:MTH00163 422 YLLLFLHWLPLN 433
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
7-484 |
5.39e-27 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 114.71 E-value: 5.39e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 7 LTILVVLPIFAGSLIFFLphkgnKIVRWYTISIclLEFLLMTYAFCYHFQLEDPliQLKEDYKWIDVFDFHWRLGIDGLS 86
Cdd:PRK08668 3 LTLLLLTPLIGSVLAYLL-----KKINEKIGVI--GNALPLLFLIKLYFTLKVG--TGEKLTLFFGGFKLTFTLTHLSWF 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 87 LGSILLTGFITTLATLAAWPiTRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRLYSATK 166
Cdd:PRK08668 74 FAMISLLVIFSVAFFMVSEK-TKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKKESRKASLKY 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 167 FILYTAGGSIFFLIGVLGMGLYGSNEPGLDLERLINQSYPETleILLYFGFLIAYAV-KLPIIPLHTWLPDTHGEAHYST 245
Cdd:PRK08668 153 FVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLINDTSTGF--ALIVFLFLLAFGVaKAGIFPLHVWAPDAYSEAPQSF 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 246 CMLLAGILLKMGAYGLIrINMELLP-----------HAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMG 314
Cdd:PRK08668 231 SAVLSGQLSKLGAYGFL-LVLYVLPgtklfsefgtyRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGG 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 315 FIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFsSFSMASLA-LPGMSG 393
Cdd:PRK08668 310 YILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMY-LVAIISLAgIPPMSG 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 394 FVAELVVFFGLITSPKFLLmpktliTFVMAIGMILTPIYLLSMLRQMFYGY---KLFNVPNANFVDSGPRELFILICIFL 470
Cdd:PRK08668 389 FASKWLIFEALISKGMPIT------AFMAFFGSIGSFLYVFRPLAGVFLGQlpsDHKDVKEAPLPMLIPMAILVLLNVVF 462
|
490
....*....|....
gi 2172622115 471 pvigiGIYPDFVLS 484
Cdd:PRK08668 463 -----GVAPGLVLQ 471
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
129-437 |
1.45e-26 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 111.91 E-value: 1.45e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 129 FSSRDLLLFFIMWELELIPVYLLLSMWGGK-RRLYSATKFILYTAGGSIFFLIgvlgMGLYGSNEPGlDLERLINQSYPE 207
Cdd:MTH00110 110 FTATELIMFYILFEATLIPTLIIITRWGNQtERLNAGLYFLFYTLVGSLPLLV----ALLYIQNNLG-SLNFLLLQLWAQ 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 208 TLE-----ILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLvI 282
Cdd:MTH00110 185 PLPnswsnNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAYPFL-M 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 283 IGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRM--RLVY 360
Cdd:MTH00110 264 LSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIhsRTMI 343
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2172622115 361 LEElgGISIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSPKFLLMpktlitfVMAIGMILTPIYLLSML 437
Cdd:MTH00110 344 LAR--GLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITII-------LMGLNMLITALYSLYML 411
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-412 |
1.90e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 111.97 E-value: 1.90e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 9 ILVVLPIFAGSLIFFLPhkgnKIVRWYTISICLLefllmtyAFCYHFQLedPLIQLKEDYKWIDVFDFHwrLGIDGLSLG 88
Cdd:PRK07234 7 VWIALPFLLGFAIYLLP----KLDRNLALGMAIV-------SAVYALGL--VASMVPLELTLLDNFGVT--LRADALSGY 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 89 SILLTGFITTLATLAAWPiTRNSRLFYFLmLAMYSGQIGL-FSSRDLLLFFIMWELELIPVYLLLSMWGGKRRLYSATKF 167
Cdd:PRK07234 72 FILTNALVTLAVIFYCWE-SAKTRFFYAQ-LLILHGSVNAaFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRY 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 168 ILYTAGGSIFFLIGVlgMGLYGSNEpGLDLERLINQSyPETLEiLLYFGFLiayaVKLPIIPLHTWLPDTHGEAHYSTCM 247
Cdd:PRK07234 150 LFYSNVAMLFYLIGA--VLVYQANG-TFAFSGLATAD-PEAFA-LIALGLL----VKGGIFVSGLWLPLTHSEAEPPVSA 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 248 LLAGILLKMGAYGLIRinmelLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMgfiiigiGSITNIG 327
Cdd:PRK07234 221 LLSGVVVKAGVFPLVR-----CALDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQL-------GFILAAP 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 328 LNGAILQiLSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPkiFTMfSSFSMAslALPGMSGFVAELVVFFGLITS 407
Cdd:PRK07234 289 LVGGLYA-LAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIP--LTM-ASFSIA--GFPLLAGFVSKVLTLKNLLPW 362
|
....*
gi 2172622115 408 PKFLL 412
Cdd:PRK07234 363 QAIAL 367
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
80-424 |
1.22e-25 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 109.30 E-value: 1.22e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 80 LGIDGLSLGSILLTGFITTLATLAAWPI---TRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWG 156
Cdd:MTH00205 53 FSFDSLSLPLIMLSFWISLLMVLASYKVfksNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 157 GK-RRLYSATKFILYTAGGSIFFLIGVLGMG-LYGSNEPGLDLERLINQSYPETLEILLYFGFLiayaVKLPIIPLHTWL 234
Cdd:MTH00205 133 YQpERLQASMYMMMYTLCASLPLLIGLFFLNsLNFSLSMFFNFPLNFSDFYLFLYWIFLMLAFL----VKLPMYFVHLWL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 235 PDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLphahYLFSPWLVIIGAIQIIYAASTS---LGQRNFKKRIAYSSVS 311
Cdd:MTH00205 209 PKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLY----KLNSNFSELFFSISLWGGVMTGmicLRQVDLKSLIAYSSVG 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 312 HMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGM 391
Cdd:MTH00205 285 HMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPS 364
|
330 340 350
....*....|....*....|....*....|...
gi 2172622115 392 SGFVAELVVFFGLITSPKFLLMPKTLITFVMAI 424
Cdd:MTH00205 365 LNLASEILLIMSLLSSSKISGIPLSLISFLSGA 397
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-407 |
1.56e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 109.68 E-value: 1.56e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 9 ILVVLPIFAGSLIFFLPHKGNKIVRWYTISICLLEFLLMTYAFCYHFQLEDPLIQLkedykwidVFDFHWRLGI----DG 84
Cdd:PRK12667 11 ILLVLFAFLLPLLSILLKGNRKIQKIYALLVSLITLILSILLFIQVYSSNKPIVYL--------FGGWPAPIGIvyevDL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 85 LSLGSILLTGFITTLATLAAWPITRNSRL---FYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRR- 160
Cdd:PRK12667 83 LGALLGLLTALVMFLILIYSYWYLEHESGpewYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDa 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 161 LYSATKFILYTA-GGSIFFLIGVLGMGLYGS-NEPGLDLE---RLINQSYPETLEILLYFG-----FLIAYAVKLPIIPL 230
Cdd:PRK12667 163 VEAAIKYALIGAvGTTLYFLALAFLYATFGTlNMADLSAKirgLSFPLTGGLAGNPPLALGvalalALWAFTIKAAIFPN 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 231 HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRI------NMELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKR 304
Cdd:PRK12667 243 HFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgISPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRL 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 305 IAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMA 384
Cdd:PRK12667 323 LAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALS 402
|
410 420
....*....|....*....|...
gi 2172622115 385 SLALPGMSGFVAELVVFFGLITS 407
Cdd:PRK12667 403 LVGIPPLNGFFSKLLLFNALLES 425
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
68-476 |
1.55e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 106.44 E-value: 1.55e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 68 YKWIDVFDFHWRLGIDGLSLGSILLTGFITTLATLAAW------PITRNSRLFYFLMLAMYSGQIGLFSSrDLLLFFIMW 141
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPkylainNIDSSSRFLFFFNLTILIGVLIALSS-DLFTMFVCY 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 142 ELELIPVYLLL-------SMWGGKRRLysatKFILYTAggSIFFLIGVlgmGLYGSNEPGLDLERLINQSYPETLEILLY 214
Cdd:PRK06589 146 ELLTISTAFLIghtrnniSLSGGYKYL----KILMISA--LLLFLPAV---ILIYTKTGNLDFVSGGLFSKNQSIILLLM 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 215 FGFLIAyavKLPIIPLHTWLPdTHGEAHYSTCMLL-AGILLKMGAYGLIRINMEL--LPHAHYLF--SPWLVIIGAIQII 289
Cdd:PRK06589 217 FIYGIA---KTAIFPVHSWLP-AAMVAHYPVSALLhAVIVVKTGLFCIYKILLYIfgLSYLQRIFaeFNWLIFIPIVSIF 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 290 YAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISI 369
Cdd:PRK06589 293 YSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSK 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 370 PMPKIFTMFSSFSMASLALPGMSGFVAELVVFfgLITSPKFLLMPKTLITFVMAIGMILTPIYLLSMLrqmFYGYKLFNV 449
Cdd:PRK06589 373 SFPLISFIISISSLSLIGIPIFSGFISKFLIL--LAASEQNQPWLSIIVMLVVIASSILSALYLLKIL---SSIYKPSLS 447
|
410 420
....*....|....*....|....*..
gi 2172622115 450 PNANFVDSGPRELFILICIFLPVIGIG 476
Cdd:PRK06589 448 ENSFITKSLPYLMQISVITCCCALTLF 474
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
80-423 |
2.73e-24 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 105.21 E-value: 2.73e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 80 LGIDGLSLGSILLTGFITTLATLAAWPITRNSR---LFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWG 156
Cdd:MTH00014 55 LSSDMLSAPLITLTLWITALMILASFKIFQNNKapkTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWG 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 157 GK-RRLYSATKFILYTAGGSIFFLIGVLGMGLYGSNepgldLERLINQSYPETLEI--LLYFGFLIAYAVKLPIIPLHTW 233
Cdd:MTH00014 135 YQpERLQASFYLMIYTVTASLPLLMSILLIFYTNNS-----LSMLMSSMEPPSIYLmnLWWLITILAFMVKMPLYTVHLW 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 234 LPDTHGEAHYSTCMLLAGILLKMGAYGLIRINmELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHM 313
Cdd:MTH00014 210 LPKAHVEAPVAGSMILAGILLKLGGYGLLRMS-SLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHM 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 314 GFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSG 393
Cdd:MTH00014 289 GLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSIN 368
|
330 340 350
....*....|....*....|....*....|
gi 2172622115 394 FVAELVVFFGLITSPKFLLMPKTLITFVMA 423
Cdd:MTH00014 369 LLSEIMLLTSILSSSLSTAILLAITSFLAA 398
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
6-443 |
9.47e-24 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 104.85 E-value: 9.47e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 6 WLTILVVLPIFAGSLIFFLPHK-GNKIVRWYTISICLLEFLLMTYAFcYHFQLEDPLIQLkedYKWIDVFDFHWRLG--I 82
Cdd:COG1009 3 LLWLIPLLPLLGALLAGLLGRRlGRRAAGWLAALAPLAAFVLSLLLF-PAVLGGEVVVEL---YTWIPVGSLGLDFGfrL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 83 DGLSLGSILLTGFITTLATLAA-------WPITRnsrlFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMW 155
Cdd:COG1009 79 DGLSLLMLLLVTGVGLLVHIYSigymsgdPGLAR----FFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFW 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 156 GGKRR-LYSATKFILYTAGGSIFFLIGVLGMGLY-GSnepgLDLERLINQS---YPETLEILLYFGFLIAYAVKLPIIPL 230
Cdd:COG1009 155 YEKPSaRRAARKAFLVTRVGDLGLLLGILLLGAIaGT----LNFSELLAAAptiLSSPLLTLILLLLLLGAFGKSAQFPL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 231 HTWLPDTHgEA--------HYSTcMLLAGILLkmgaygLIRIN--MELLPHAHYLfspwLVIIGAIQIIYAASTSLGQRN 300
Cdd:COG1009 231 HFWLPDAM-EGptpvsallHAAT-MVKAGVYL------LARLSplFALSPVWLTV----VAIIGAITALFAALIALAQTD 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 301 FKKRIAYSSVSHMgfiIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMF-- 378
Cdd:COG1009 299 IKRVLAYSTVSQL---GYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFli 375
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2172622115 379 SSFSMAslALPGMSGFVAELVVFFGLITSPKFllmpKTLITFVMAIGMILTPIYLLSMLRQMFYG 443
Cdd:COG1009 376 GALSLA--GIPPFAGFFSKEAILEAALEAGGL----GPLLLAVALLGAFLTAFYSFRLFFLVFFG 434
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
82-487 |
7.36e-22 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 98.26 E-value: 7.36e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 82 IDGLSLGSILLTGFITTLATLAAWPITRNSRL----FYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGG 157
Cdd:COG1007 68 VDGFALFFKLLILLAALLVLLLSRDYLERRGLlrgeFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRD 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 158 KRR-LYSATKFILYTAGGSIFFLIGV-LGMGLYGSnepgLDLERLINQ-SYPETLEILLYFGF---LIAYAVKLPIIPLH 231
Cdd:COG1007 148 DRRsSEAALKYFLLGALSSGFLLYGIsLLYGATGS----LNLAGIAAAlAAGGANSPLLLLGLvlvLAGLAFKLSAVPFH 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 232 TWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVS 311
Cdd:COG1007 224 MWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIA 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 312 HMGFIIIGIGSITNIGLNGAILQILSHGFIGATLF-FLAGTASDRMRLVYLEELGGISIPMPKIFTMFsSFSMASLA-LP 389
Cdd:COG1007 304 HAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLALAM-TIFLLSLAgIP 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 390 GMSGFVAELVVFFGLITSPKFLLmpktliTFVMAIGMILTPIYLLSMLRQMFygyklFNVPNANFVDSGPRELFILICIF 469
Cdd:COG1007 383 PTAGFFGKFYVFSAAVEAGLYWL------AVIAVLNSVISAYYYLRVVKAMY-----FDEPEEEAPISAPPGLRVALVIA 451
|
410
....*....|....*....
gi 2172622115 470 -LPVIGIGIYPDFVLSLSA 487
Cdd:COG1007 452 aLLVLLLGIFPGPLLDLAA 470
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
6-494 |
9.93e-22 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 98.10 E-value: 9.93e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 6 WLTIL-VVLPIFAGSLIFFLPHKgNKIVRWytISIC-LLEFLLMTYAFCYHFQLEDPLIqlkedykwIDVFDFHWRLGI- 82
Cdd:PRK12663 4 NLLILpMLLPLLCGLVLVFLRNR-DRLQRY--LAIGtLTILTLISLALLIYVQRHGPIT--------LDFGGWLPPFGIq 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 83 ---DGLSLGSILLTGFITTLATLAAWPITRNS--RLFYF-LMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWG 156
Cdd:PRK12663 73 ftgDSLSALMVTTASFVATAIMAYGFGDIEHSgrRYGFPpFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQ 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 157 GKRRLYSATKFILYTAGGSIFFLIGV-LGMGLYGSNEPGLDLERLINQSYPETLEILLYFgFLIAYAVKLPIIPLHtWLP 235
Cdd:PRK12663 153 EREQLRGAIKYVVLNLIGSWLFLLGIgLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALL-FLLAFGMKAALFPFM-WLP 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 236 DTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGF 315
Cdd:PRK12663 231 AAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGF 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 316 IIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFV 395
Cdd:PRK12663 311 ILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFW 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 396 AELVVFFGLITSPKFLLmpktliTFVMAIGMILTPIYLLSMLRQMFYGYKlfNVPNANFVDSGPRELFILICIFLPVIGI 475
Cdd:PRK12663 391 GKVLLVQGALDNGAYIL------LALMLITSLITMYSLFRIFFLAYWGDK--DGEEVNFKPIPLYRKLPLSILAVVVIAM 462
|
490
....*....|....*....
gi 2172622115 476 GIYPDFVLSLSADRVEALL 494
Cdd:PRK12663 463 GIAAEPLLNLTQDAAEGLL 481
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
114-484 |
6.41e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 92.47 E-value: 6.41e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 114 FYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGK-RRLYSATKFILYTAGGSIFFLIGV-LGMGLYGSN 191
Cdd:PRK08376 123 YYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTwEAIEAGIKYMFVGSLASSMVLLGIaLLYGQYGTL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 192 EPGLDLERLinQSYPETLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYS-TCMLLagILLKMGAYGLIRINMELL- 269
Cdd:PRK08376 203 NMAYLAVKM--SENPTVVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSiSAMLL--VIKQAGLYALARVLFSIYg 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 270 PHAHYLFSPWLVII-GAIQIIYAASTSLGQRNFKKRIAYSSVSHM------------GFIIIGIGSITNIGLNGAILQIL 336
Cdd:PRK08376 279 PAINLATVGWVIIIlGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIgymllglgvglaALGDPAMASYGEIALAGGIYHIV 358
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 337 SHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELvvffgLITSPKFLLMPkt 416
Cdd:PRK08376 359 NHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKW-----LIYESSALFNP-- 431
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2172622115 417 LITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNANfvDSGPRELFILICIFLPVIGIGIYPDFVLS 484
Cdd:PRK08376 432 ILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVMNVK--EPPKPMLVPMLILAIAIIGMGLFPWQISD 497
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
80-494 |
3.08e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 90.18 E-value: 3.08e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 80 LGIDGLSLGSILLTGFITTLATLAAWPITRNS------RLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLS 153
Cdd:PRK12662 72 LRVDILSATMLVLVNFIAVMSVLYGIYPNRKEisvnkiPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVA 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 154 MWGGKRRLYSATKFILYTAGGSIFFLIGV-LGMGLYGSNEPGLDLERLINQSYPETLEILLYFGFLiAYAVKLPIIPLHT 232
Cdd:PRK12662 152 MGRDKKALVAAFEYLIIGTIGATFYLIGIgFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLFIMV-GLFIKAALFPFHK 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 233 WLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYL----FSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYS 308
Cdd:PRK12662 231 WLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFttlpFNNVFMILAALAIVFGSVLAILSKDIKRIFAYS 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 309 SVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLAL 388
Cdd:PRK12662 311 SISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGM 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 389 PGMSGFVAELVVFFGLITSPKFLLMpktlitFVMAIGMILTPIYLLSMLRQMFY---------GYKLFNVPNanfvdsgP 459
Cdd:PRK12662 391 PPTSGFVAKWYILDAFIKSNAWIGL------VVLLVGSGLSVIYVWKIVEALYFesrmveskaNDKAFKTPN-------A 457
|
410 420 430
....*....|....*....|....*....|....*
gi 2172622115 460 RELFILICIFLPVIgIGIYPDFVLSLSADRVEALL 494
Cdd:PRK12662 458 MVLCIWIMAILSII-VGIYPIPLTLISEKIAFDLL 491
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
82-411 |
4.71e-19 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 89.81 E-value: 4.71e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 82 IDGLSLGSILLTGFITTLATLAAWPIT-----------RNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYL 150
Cdd:PRK08676 61 IDHLGIFVVLIASVVFILAALYARGYVdhllsngeldpENLKVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAM 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 151 LLSMWGGKRRLYSATKFILYTAGGSIFFLIGVLGMGLYGSNEPG---LDLERLINQS--YPETLEILLYFGFLIAYAVKL 225
Cdd:PRK08676 141 LIAILSARENIDAALKYIFIASTAMIFAFIGLIFLFSLTRQALGtgtLNWTELAAHAslLSPSVLGASFLFIFIGFLAKS 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 226 PIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELL-PHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKR 304
Cdd:PRK08676 221 GLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRqSGAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 305 IAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAG--------TASDRMRLVYLEE--------LGGIS 368
Cdd:PRK08676 301 IAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGilhrqyrsDRFDRIFDVFRLQpvaawgviLGSAA 380
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2172622115 369 IPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSPKFL 411
Cdd:PRK08676 381 IIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFA 423
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
8-486 |
1.07e-18 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 88.67 E-value: 1.07e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 8 TILVVLPIFAGSLIFFLPHKGNKIVRWYTISICLLEFLLMTYAFCYHFQLEDPLIQLKEDYK---WIDVFDFHWRlgidG 84
Cdd:PRK08377 6 SLLIALPLISAFFVPVIKGIGKSAVRYYLILITLLQTGIAGWVFMEVYTTGKPIIIMAGGWKppvGINLYIGPFA----A 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 85 LSLGSILLTGFITTLATLAAW---PITRNSRLFYFLMLamysGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRL 161
Cdd:PRK08377 82 LFVLIIAIVSFIMSIFSLKAVevePIDKYAMLFLLLML----GATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 162 YSATKFILYTAGGSIFFLIGVlgMGLYGSNEP--GLDLERLINQSYPETLEI---LLYFGFliayAVKLPIIPLHTWLPD 236
Cdd:PRK08377 158 EASMKYIVLGGIGSSFFLIGV--ALIYGATGTlnMAHIAQLAGTIDPTVAQVglaLLIFGL----AVEAELFPLNAWAPD 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 237 THGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVII-GAIQIIYAASTSLGQRNFKKRIAYSSVSHMGF 315
Cdd:PRK08377 232 AYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLVIImATLTVFFAELSALRQKNVKRMIAYSSIGQVGM 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 316 IIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFV 395
Cdd:PRK08377 312 IALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFW 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 396 AELVVFFGLITSPkfLLMPKTLITFvmaiGMILTPIYLLSMLRQMFYGyklfnvPNANFVDSGPRELFILICIFLPVIGI 475
Cdd:PRK08377 392 SKFRIILAGLSAG--YTWPVALVLG----ASVVEAVYYFRLIHTMWFK------GEGERIRENAAIGIILLLLAALIVVI 459
|
490
....*....|.
gi 2172622115 476 GIYPDFVLSLS 486
Cdd:PRK08377 460 GIYPTPFWEVV 470
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
7-478 |
2.84e-18 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 87.29 E-value: 2.84e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 7 LTILVVLPIFAGSLIFFLPHKGnkIVRWYTISICLLEFLLMtyAFCYHFQLEDPLIqlkedykwidvFDFHWRLGIDGLS 86
Cdd:PRK06458 7 FALLLLIPLLASLLLFALRKRR--LVATLNVLGITLTLILA--LWLVFTVPDAGEI-----------FAAGLWFFIDDLN 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 87 LGSILLTGFITTLATL----------AAWPITRNSRLFYFLMLamysgQIGLFSsrdLLLFF------IMW---ELELIP 147
Cdd:PRK06458 72 VFFLALIGVVGFLTSLysigymrhevEHGELSPVTLRLYYGMY-----QLFLFT---MLLALtsnnlgLMWvaiEATTLS 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 148 VYLLLSMWGGKRRLYSATKFILYTAGGSIFFLIG----------VLGMGLYGSnepgldLERLINQSYPETLEILLYFGF 217
Cdd:PRK06458 144 SALLVGIYRTRASLEAAWKYIIICSVGVAFALFGtilvyanaatVMGDGEMAI------LWTELLKHASLLDPTLMKLAF 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 218 ---LIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLF-SPWLVIIGAIQIIYAAS 293
Cdd:PRK06458 218 vflLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFpGRLLLIFGLLSVLVAAF 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 294 TSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPK 373
Cdd:PRK06458 298 FLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPL 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 374 IFTMFSSFSMASLALPGMSGFVAELVVFFGLITSPKFLLMPKTLITFVMAIGMiltpiyLLSMLRQMFYGYKLFNVPNAn 453
Cdd:PRK06458 378 TGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAA------LVRRVAGMVFGEPPEAVNRG- 450
|
490 500
....*....|....*....|....*
gi 2172622115 454 fvDSGPRELFILICIFLPVIGIGIY 478
Cdd:PRK06458 451 --DLGWLTTSPMFVHLVLVLVLGLY 473
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
68-487 |
2.86e-18 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 87.18 E-value: 2.86e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 68 YKWIDVFDFHWRLGIDGLSLGS--ILLTGFITTLATLAAWPITRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELEL 145
Cdd:PRK05777 57 GAAGGGTAFGGMLVVDGFALFLkgLILLASLLALLLARPYLEDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLS 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 146 IPVYLLLSMWGGKRR-LYSATKFILYTAGGSIFFLIGVlgMGLYGSNEpGLDLERLINQ-SYPETLEILLYFGF---LIA 220
Cdd:PRK05777 137 LPLYALAALRRDRRRsLEAAIKYFVLGALASGFLLYGM--SLLYGATG-SLSFAGIAKAlADGSGNSLLLLFGLvflLVG 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 221 YAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILlKMGAYG-LIRINMELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQR 299
Cdd:PRK05777 214 LAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAvLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQT 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 300 NFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLF-FLAGTASDRMRLVYLEELGGISIPMPKIFTMF 378
Cdd:PRK05777 293 NIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAFgVISLLRRKGGEAESISDFAGLSKRSPLLAAVM 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 379 SSFsMASLA-LPGMSGFVAELVVFFGLITSPKFLLmpktliTFVMAIGMILTPIYLLSMLRQMFygyklFNVPNANFVD- 456
Cdd:PRK05777 373 TIF-MLSLAgIPPTAGFWGKFYVFEAAVEAGLWWL------AVIGVLNSAIGAFYYLRVIKLMY-----FDEPPRDAPVn 440
|
410 420 430
....*....|....*....|....*....|..
gi 2172622115 457 -SGPRELFILICIFLPVIGIGIYPDFVLSLSA 487
Cdd:PRK05777 441 wPLSAGGAVLSVSALLVLVLGIFPQPLLDLAA 472
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
106-443 |
8.70e-16 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 79.63 E-value: 8.70e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 106 PITRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRLYSATKFILYTAGGSIFFLIGVLGM 185
Cdd:PRK06525 107 PVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATL 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 186 GLYGSnepglDLERLINQSYPETLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRIN 265
Cdd:PRK06525 187 FLQTG-----TFALSALSGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAI 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 266 MELLPHAHYLFSpWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSH---MGFIIIGIGSITNIGLNGAILQILSHGFIG 342
Cdd:PRK06525 262 QSMGPIPHVIGY-VGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQlgyMFFGLSLAILGSRLALEGSIAYIFNHAFAK 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 343 ATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFG--LITSPKFLLMPKTLITF 420
Cdd:PRK06525 341 SLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAgfELSVEYWILLPAMVLLL 420
|
330 340
....*....|....*....|...
gi 2172622115 421 VMAIGMIltpIYLLSMLRQMFYG 443
Cdd:PRK06525 421 IESVASF---AWFLRWFGRVVFG 440
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
70-443 |
5.73e-15 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 77.87 E-value: 5.73e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 70 WIDVFDFHWRLGIDGLSLGSILLTGFITTLATLAAWPITRNS-----RLFYFLMLAMYSgQIGLFSSRDLLLFFIMWELE 144
Cdd:PRK12646 64 WMKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRkdnlpRFYFYLTLFMFS-MIGIVLSDNTILMYVFWELT 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 145 LIPVYLLLSMW-GGKRRLYSATKFILYTAGGSIFFLIG-VLGMGLYGSNepglDLERLINQSYP---ETLEILLYFGFLI 219
Cdd:PRK12646 143 SVSSFLLISYWyNNGDSQFGAIQSFMITVFGGLALLVGfIMLYIMTGTN----NITEILGQADHiknHGLFIPMIFMFLL 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 220 AYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSpwLVIIGAIQIIYAASTSLGQR 299
Cdd:PRK12646 219 GAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYI--VTFVGLITMLFGSITALKQW 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 300 NFKKRIAYSSVSHMGFIIIG--------------IGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELG 365
Cdd:PRK12646 297 DLKGILAYSTISQLGMIMAMvgigggyaqhqqdaIASIYVFVLFAALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILS 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 366 GISIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITS---PKFLLMPKTLITFVMAIGMILTPIYLLSMLRQMFY 442
Cdd:PRK12646 377 GMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTgqlSQFSLISMIIIVFIGVIASIFTFTYALYMVKEVFW 456
|
.
gi 2172622115 443 G 443
Cdd:PRK12646 457 G 457
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
64-432 |
7.15e-15 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 77.39 E-value: 7.15e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 64 LKEDYKWIDVF-----DFHWRLGIDGLSLGSILLTGFI--TTLATLAAW-PITRNSRLFYFLMLAMYSGQIGLFSSRDLL 135
Cdd:PRK12650 54 LTWSVTWIPDLlgngvDVNLALRADALSLFFALLALVIgaVVFIYSARYlPRKKGNTSFYLLMTAFMAAMLLLVLADDVV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 136 LFFIMWELELIPVYLLLSMWGGKRRLySATKFILYTAGGSIFFLIGV-LGMGLYGSNEpgLDlERLINQSYPETLEILLY 214
Cdd:PRK12650 134 VLFVAWELVSLASFFLIARSGSGGEA-GSIRTLILTFFGGLTLLAAVaIAATQTGTTS--LS-GILHSDVWAEKPGLTTV 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 215 FGFLIAYAV--KLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRIN--MELLPHAHYLfspwLVIIGAIQIIY 290
Cdd:PRK12650 210 VAVLIAVAAftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSpvFHDVAVWNWL----LIIVGMITALM 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 291 AASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIP 370
Cdd:PRK12650 286 GAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRR 365
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2172622115 371 MPKIFTM--FSSFSMAslALPGMSGFVAELvvffGLITSpkFLLMP-----KTLITFVMAIGMILTPIY 432
Cdd:PRK12650 366 MPFTFVSvtIAALSMA--AVPPLFGFVSKE----GMLTA--FLEAPggnagVVLLLVGAALGAVFTFAY 426
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
211-409 |
1.55e-14 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 76.08 E-value: 1.55e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 211 ILLYFGFliayAVKLPIIPLHTWLPDTHGEA--HYSTcmLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQI 288
Cdd:PRK06521 214 LLALFGF----GAKAGLVPLHVWLPRAHPAApsHVSA--LMSGVMLKVAIYGILRVVFDLLGAPGWWWGVLVLALGAISA 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 289 IYAASTSLGQRNFKKRIAYSSVSH-----------MGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMR 357
Cdd:PRK06521 288 VLGVLYALAEHDLKRLLAYSTIENigiifvglglaMVFIAYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATG 367
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 2172622115 358 LVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSPK 409
Cdd:PRK06521 368 TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSSPG 419
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-479 |
6.04e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 73.83 E-value: 6.04e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 90 ILLTGFITTLATLAAWP---ITRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRLYSATK 166
Cdd:PRK07691 83 VLTSSIITFLVILYSFQtigIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIK 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 167 FILYTAGGSIFFLIGV---------LGMGlygsnepglDLERLINQSYPETLEIL--LYFGFLIAYAVKLPIIPLHTWLP 235
Cdd:PRK07691 163 YVLINVVSSAFFVVAVailysvvgtLNMA---------DISVKIAELSAGQTGLItvVAILFLFVFATKAGLFPLYFWLP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 236 DTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGF 315
Cdd:PRK07691 234 GSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGV 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 316 IIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFsSFSMASLA-LPGMSGF 394
Cdd:PRK07691 314 ILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMF-FIAALSLAgIPPLSGF 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 395 VAELVVFFGLITSPKFLLmpktlitfvMAIGMILTPIYLLSMLR---QMFYGYKLFNVPNANFVDSG---PRELFILICI 468
Cdd:PRK07691 393 YGKFFIVEGTFEAGFYVS---------GIIVLLSSLLVLYSVIKiflKGFWGEPKGYDLNNKVPVKKlllPAVVLVAITI 463
|
410
....*....|.
gi 2172622115 469 FLPVIGIGIYP 479
Cdd:PRK07691 464 LYGLGAEPLYP 474
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
79-407 |
6.82e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 74.00 E-value: 6.82e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 79 RLGIDGLSLGSILLTGFITtlATLAAWPITRNSRLFYFLMLAMYSGQIGLF--------SSRDLLLFFIMWEL-ELIPVY 149
Cdd:PRK08667 72 TFHIDRLAAFFIILIGLVS--LCVAIYSLGYNEHMSSNERANLLSALTALFilsmlgvvASANTFSFLFFWEImALSSFF 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 150 LLLSMWGGKRRLYSATKFILYTAGGSIFFLIGVLGMGLY-GSNEPGLDlerlinqSYPETLEILLYFGFLIAYAVKLPII 228
Cdd:PRK08667 150 LVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQtGSFELSPL-------GASAGILSLVFLLLFLGFGIKAGII 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 229 PLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELL-PHAHYLFSpwLVIIGAIQIIYAASTSLGQRNFKKRIAY 307
Cdd:PRK08667 223 PFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLsPELWWGVL--ILLAGSISALLGVIYALKEHDLKGLLAY 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 308 SSVSHM-----------GFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFT 376
Cdd:PRK08667 301 SSIENIgiilmgiglyvIFGVYGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSA 380
|
330 340 350
....*....|....*....|....*....|.
gi 2172622115 377 MFSSFSMASLALPGMSGFVAELVVFFGLITS 407
Cdd:PRK08667 381 LFLVGAVSIAALPPFNGFASELLLYESFFQS 411
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-445 |
1.07e-13 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 73.71 E-value: 1.07e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 1 MSYFPWLTILVVLPIFAGSLIFFLPHKGNKIVRWYTISICLLEFLLMTYAFCYhfQLEDPLIQlkEDYKWIDVFDFHWRL 80
Cdd:PRK12649 1 MDSFNAIVLAIFLPFILAWTVPVLEKVLKQRIGWFAAAIAFTSFALIAQVAPE--VIHGTIIT--GSISWLPSAGVEFSI 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 81 GIDGLSL---------GSILLT---GFITTLATLaawpitrnSRLFYFLMLAMYSgQIGLFSSRDLLLFFIMWELELIPV 148
Cdd:PRK12649 77 YADGLAVligliasgiGVIIMSysnGYMSHKEDL--------PRYYQYLLLFMGS-MIGMVFSGNTIQLFIFWELTSITS 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 149 YLLLSMWGGK-RRLYSATKFILYTAGGSIFFLIGVLGM----GLYGSNEPGLDLERLINQSYPETLEILLYFgFLIAYAV 223
Cdd:PRK12649 148 FMLIGYWRHRpESVYGATKSLLITAGGGLFMFAGFLLLhvitGTYDIATILQDSELIENIKGHPLFLITLIL-IFIGAAA 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 224 KLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInmellphaHYLFS---PWLVII---GAIQIIYAASTSLG 297
Cdd:PRK12649 227 KSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARI--------HPIFSgteAWFILVsgtGMITMVLAGFLAFR 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 298 QRNFKKRIAYSSVSH----MGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPK 373
Cdd:PRK12649 299 QTDIKAILAYSTISQlaylMTMYGYTTYHEPGLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPI 378
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2172622115 374 IFTMFSSFSMASLALPGMSGFVAELVVFFGLITSPKFLLMPKTLITFVMAI-GMILTPIYLLSMLRQMFYGYK 445
Cdd:PRK12649 379 TFIVASIAALAMAGIPPLNGFLSKEMFYETSVEMGALIGGPFTIIIPAVAVlGGVFTFAYSIKLIDGIFLGER 451
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
116-398 |
1.56e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 72.69 E-value: 1.56e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 116 FLMLAMysGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRLYSATKFILYTAGGSIFFLIGvLGMgLYGSN---- 191
Cdd:PRK12665 117 YLILVA--GVSNAFLAGDLFNLYVGFEILLVASYVLLTLGATAARVRAGVTYVMVSMVSSLLFLIG-IAL-VYAATgtln 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 192 --EPGLDLERLinqsyPETLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELL 269
Cdd:PRK12665 193 maDLAVRLDEL-----PSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLF 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 270 PHAHylFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLA 349
Cdd:PRK12665 268 PGGG--LDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVV 345
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2172622115 350 GTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAEL 398
Cdd:PRK12665 346 GLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKV 394
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
7-443 |
2.61e-13 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 72.31 E-value: 2.61e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 7 LTILVVLPiFAGSLI--FFLPHKGNKIVRWYTISICLLEFLLMTYAFCYHFQLEDPLIQLKEDYKWIDV--FDFHWRLGI 82
Cdd:TIGR01974 3 IFLIVFLP-LIGFLIagLFGRRIGERVSGIIGIGSVGLSAALSAFVFVDFFLNGEGEAFTQSLFPWISVggFQVDFGLRL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 83 DGLSLGSILLTGFITTLATLAAWPITR----NSRLFYFLMLAMYSgQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGK 158
Cdd:TIGR01974 82 DGLSLTMLVVVTGVGSLVHIYSIGYMAhdegYSRFFAYLNLFTFS-MLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 159 RRLYSAT-KFILYTAGGSIFFLIGVLGMGLYGSNEPGLDLERLINQSYPETLEILLYFGFLIAYAvKLPIIPLHTWLPD- 236
Cdd:TIGR01974 161 PSANNAAiKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPGAFFSALTLICLLLFIGAMG-KSAQLPLHTWLPDa 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 237 ----THGEA--HYSTcMLLAGILLKMGAYGLirinMELLPHAHYlfspWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSV 310
Cdd:TIGR01974 240 megpTPVSAliHAAT-MVTAGVYLVARTSPL----FELSPTALY----LVTIIGAITALFAATVALVQNDIKRILAYSTM 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 311 SHMGFIIIGIGSITNiglNGAILQILSHGFIGATLFFLAGTASDRMRL-VYLEELGGISIPMPKIFTMFSSFSMASLALP 389
Cdd:TIGR01974 311 SQLGYMFLALGVGAY---AAAIFHLMTHAFFKALLFLGAGSVIHAMHHeQDIRKMGGLRKKMPVTYITFLIGSLALIGFP 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2172622115 390 GMSGFVAElvvffGLITSPKFLLMPKTLITFVMAIGMILTPIYLLSMLRQMFYG 443
Cdd:TIGR01974 388 GFAGFFSK-----DLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHG 436
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
129-442 |
2.85e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 68.39 E-value: 2.85e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 129 FSSRDLLLFFIMWELELIPVYLLLSMWGGK-RRLYSATKFILYTAGGSIFFLIGVLGMGLYGSNepgldlerlinQSYPE 207
Cdd:MTH00094 79 FVSSNMLMLYMFFELSMFPILIMILGYGSQiEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSL-----------CYFDF 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 208 TLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLphahYLFSPWLVIIGAIQ 287
Cdd:MTH00094 148 FLSWEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLN----FVYNNFWIIFSLLG 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 288 IIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAG--TASDRMRLVY-LEEL 364
Cdd:MTH00094 224 MILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGefYHISKSRLIYfMNSF 303
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2172622115 365 GGISIPMpkiFTMFSSFSMASLALPGMSGFVAELVVFFGLITSPKFLLMpktLITFVMAIGMILTPIYLLSMLRQMFY 442
Cdd:MTH00094 304 FSSSMFF---GLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFF---FIFFYFLVSFYYSLFLIVSSFMGKKF 375
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
114-483 |
4.60e-12 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 68.05 E-value: 4.60e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 114 FYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRR-LYSATKFILYTAGGSIFFLIGV-LGMGLYGSn 191
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFsTEAGLKYFILGAFSSGLLLFGIsLIYGFTGS- 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 192 epgLDLERLINQSYPETLEI-LLYFG---FLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINME 267
Cdd:TIGR01770 183 ---LNFEDLLLFLSNGMLNIsLLLLGivlILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLY 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 268 LLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLF- 346
Cdd:TIGR01770 260 ILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFg 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 347 -FLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSPKFLLmpktliTFVMAIG 425
Cdd:TIGR01770 340 vLSLLRSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWL------AVIAVLT 413
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 426 MILTPIYLLSMLRQMFygyklFNVPNANFVDSGPR--ELFILICIFLPVIGIGIYPDFVL 483
Cdd:TIGR01770 414 SVIGAFYYLRVVKVMY-----FDKPERRIPSNPQSkaQSLLLSISALFILFLGLFPSLIL 468
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
64-396 |
5.49e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 68.41 E-value: 5.49e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 64 LKEDYKWIDVFDFHWRLGIDGLSLGSILLTGFITTLATLAAWPITRNSR---LFYFLMLAMYSGQIGLFSSRDLLLFFIM 140
Cdd:PRK12647 44 VRGGYAWVPSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPdlgRFYSYILLFMASMLGLVLSDNLITLFVF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 141 WELELIPVYLLLSMWGGK---RRlySATKFILYTAGGSIFFLIGVLGMGLY-GSNEPG--LDLERLINQSyPETLEILLY 214
Cdd:PRK12647 124 WELTSITSFLLIGFNHEReaaRR--AALQALLVTGGGGLALLAGLILLGNVtGTYSLSelLASGDVIREH-PLYLAILLL 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 215 FgfLIAYAVKLPIIPLHTWLPD-----THGEAH-YSTCMLLAGIllkmgaYGLIRINMELlpHAHYLFSPWLVIIGAIQI 288
Cdd:PRK12647 201 V--LGGAFTKSAQFPFHFWLPNameapTPVSAYlHSATMVKAGI------YLLARLNPVL--GGTPLWQTILPLFGGLTM 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 289 IYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGIS 368
Cdd:PRK12647 271 LTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLR 350
|
330 340 350
....*....|....*....|....*....|
gi 2172622115 369 IPMPKIFT--MFSSFSMAslALPGMSGFVA 396
Cdd:PRK12647 351 RAMPITAAaaLLAALSMA--GLPPLFGFLA 378
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
171-429 |
9.74e-12 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 67.16 E-value: 9.74e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 171 TAGGSIFFLIGVLGMGL-----------YGSnepgLDLERLINQSYPETLEILLYFGFLIAYAVKLPIIPLHTWLPDTHG 239
Cdd:PRK08042 133 SKEGKLWFALGRLGTLLlaiacwllwqrYGT----LDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHA 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 240 EAHYSTCMLLAGILLKMGAYGLIRINMeLLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIG 319
Cdd:PRK08042 209 NASAPAAALFSTVVMKIGLLGILTLSL-LGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLG 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 320 I-----------GSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLAL 388
Cdd:PRK08042 288 LgagvtgialeqPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAAL 367
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 2172622115 389 PGMSGFVAELVV---FFGLITSPKFLlmpKTLITFVMAIGMILT 429
Cdd:PRK08042 368 PPLNGFAGEWVIyqsFFKLSNSGAFV---ARLLGPLLAVGLAIT 408
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
83-437 |
9.95e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 67.18 E-value: 9.95e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 83 DGLSLGSILLTGFITTLATLAAwpITRNSR-------LFYFLMLamysGQIGLFSSRDLLLFFIMWELELIPVYLLLSMW 155
Cdd:PRK12666 79 DRLSALMLLLTALLALAALLYA--LAGWDRagphfhaLFQFQLM----GLNGAFLTGDLFNLFVFFEVLLAASYGLLLHG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 156 GGKRRLYSATKFILYTAGGSIFFLIGVlGMgLYGS----NEPglDLERLINQSYPETLeILLYFG---FLIAYAVKLPII 228
Cdd:PRK12666 153 SGRARVRAGLHYVAINLVASSLFLIGV-GL-IYGVtgtlNMA--DLAQRIAQLPAADR-ALLEAGaalLLVVFLIKAAMW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 229 PLHTWLPDTHGEAHYSTCMLLAgILLKMGAYGLIRINMELLPHA----HYLFSPWLVIIGAIQIIYAASTSLGQRNFKKR 304
Cdd:PRK12666 228 PLNFWLPPAYAAASAPVAALFA-IMTKVGIYAILRLSTLLFGPEagasAGFGQDWLLPGGLATLAFGAIGVLAAQRLRRL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 305 IAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLA-------GTASDR----MRLVYL----EELGGISI 369
Cdd:PRK12666 307 AAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLAdlverqrGAAADRlavtPELYDLdeeeEEEVGVAI 386
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2172622115 370 PMPKIFTMFsSFSMASLALPGM---SGFVAelvvffglitspKFLLMPKTLITFVMAIGMILTPIYLLSML 437
Cdd:PRK12666 387 PATMALLGL-LFFICALALAGLpplSGFLG------------KFALLQALLNPPGAGAAWWLWALVLLSGL 444
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
38-397 |
1.63e-11 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 66.52 E-value: 1.63e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 38 SICLLEFLLMTYAFCYHFQLEDPLIQLkEDYKWID--VFDFHWRLGIDGLSLGSILLTGFITTLATLAAWPITRNS---- 111
Cdd:MTH00032 33 TICMGSSTLIALFLAYEVLINDAVVHI-ELYKWIEseIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDphvp 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 112 ------RLFYFLMLAmysgqigLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRL-YSATKFILYTAGGSIFFLIGV-- 182
Cdd:MTH00032 112 rflcylSLFTFLMMV-------LVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQAnKAAIKAIVVNRVGDVGVILGMvl 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 183 ------------LGMGLYGSnePGLDLERLINQSYPETLEILLYFG--FLIAYAVKLPIIPLHTWLPDTHGEAHYSTCML 248
Cdd:MTH00032 185 iyktigsldfltFNGGSVGS--GIMDRGYYGGGAYESPLAPFAIIGilLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALI 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 249 LAGILLKMGAYGLIRiNMELLPHAHYLFSpWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIgl 328
Cdd:MTH00032 263 HAATMVTAGVFLMIR-SFPLFEKAPLTLL-IITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSH-- 338
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2172622115 329 NGAILQILSHGFIGATLFFLAGTASDRMRLVY--LEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAE 397
Cdd:MTH00032 339 NVGLFHLVNHAFFKALLFLSAGSVIHSTTVDEqdMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSK 409
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
12-396 |
4.85e-11 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 64.92 E-value: 4.85e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 12 VLPIFAGSLIFFLPHKgnkIVRWYTISICLLEFLLMtyafcyhFQLEDpliqlkEDYKWIDVFDFHWRLG-IDGLSLGSI 90
Cdd:PRK12668 10 LVFIAGALLVPFLPGR---ARKALLLLAPVLAVLAV-------LTVPE------GTYLTVTFLGFDLVLGrVDKLSRVFG 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 91 LLTGFITTLATLAAWPITRNSRLfyflMLAMY--SGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRLYSATKFI 168
Cdd:PRK12668 74 LIFGIMAFIGVIYALHVKDPGQH----VAALLyvGSALGAVFAGDLLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 169 LYTAGGSIFFLIGVLgmgLYGSNEPGLDLERLinQSYPETLEILLYFGFLIAYAVklpiIPLHTWLPDTHGEAHYSTCML 248
Cdd:PRK12668 150 LVHVLGGVLLLAGIL---LHYAETGSFAFGAI--AGLGGTAAWLILIGFGVNAAF----PPLHAWLPDAYPEATVTGSVF 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 249 LAGILLKMGAYGLIRInmellphahYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGL 328
Cdd:PRK12668 221 LSAFTTKTAVYALARA---------FPGTELLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAI 291
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 329 NGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPK--IFTMFSSFSMAslALPGMSGFVA 396
Cdd:PRK12668 292 NGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTELGGLYRSMPLtaLFCLVGALSIS--AFPLFSGFVS 359
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
112-311 |
4.59e-09 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 58.83 E-value: 4.59e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 112 RLFYFLMLAMysgqIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRL-YSATKFILYTAGGSIFFLIgVLGMGLYGS 190
Cdd:MTH00208 142 RLLIIFLLNM----LILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDAnSSALQAVIYNRIGDIGIIL-FLSLSLINF 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 191 NEPGLDLERLINQSYPETLEILLyFGFLIAYAVKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLIR 263
Cdd:MTH00208 217 NSWNLNEILSLNNSNSFLINILL-FGILLAAAGKSAQFGLHPWLPAamegpTPVSAllHSST-MVVAGVFL------LIR 288
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2172622115 264 INmELLPHaHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVS 311
Cdd:MTH00208 289 TS-PLISN-SPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTS 334
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
9-394 |
1.21e-07 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 54.31 E-value: 1.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 9 ILVVLPIFAGSLI--FFLPHKGNKIVRWYTiSICLLEFLLMTYAFCYHFQLEDPLIQLKEdYKWID--VFDFHWRLGIDG 84
Cdd:MTH00020 3 LLVLFLPLLGALLsgLFGRKIGEKGAGILT-SSCLIISLSWSFLIFYEILFNSSTTYIKL-WRWLDsdLLTVYFGLQFDG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 85 LSLGSILLTGFITTLATLAAWPITRNS----------RLFYFLMLAmysgqigLFSSRDLLLFFIMWELELIPVYLLLSM 154
Cdd:MTH00020 81 LVAIMLLVVTTVSTLVHIFSTAYMRGDphiprfmsylSLFTFLMVV-------LVTSDNYLQLFIGWEGVGLCSYLLINF 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 155 WGGKRRL-YSATKFILYTAGGSIFFLIGVLGM-GLYGSnepgLDLERLIN--QSYPETLEILLYFGFLIAYAVKLPIIPL 230
Cdd:MTH00020 154 WLTRIEAnKAAIKAMLVNRVGDIGLLLAMFLLwDRFGS----LDFSSVFNmvVSAPSSDITLICLFLFIGAVGKSAQLGL 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 231 HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRIN--MELLPHAHYLfspwLVIIGAIQIIYAASTSLGQRNFKKRIAYS 308
Cdd:MTH00020 230 HTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSplFEQAPLALII----VTIVGSLTVFFAATVGLVQNDLKKVIAYS 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 309 SVSHMGFIIIGIGSITNIGlngAILQILSHGFIGATLFFLAGTA----SDRMRlvyLEELGGISIPMPKIFTMFSSFSMA 384
Cdd:MTH00020 306 TCSQLGYMVVACGLSHYSI---SLFHLMNHAFFKALLFLSAGSVihalSDEQD---MRKMGGLISFLPLTYIFFLIGSLS 379
|
410
....*....|
gi 2172622115 385 SLALPGMSGF 394
Cdd:MTH00020 380 LMGFPYLTGF 389
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
109-394 |
2.31e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 50.34 E-value: 2.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 109 RNSRLFYFLMLAMYSgQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRLYSAT-KFILYTAGGSIFFLIGvLGMGL 187
Cdd:MTH00211 108 NINRFFKYLLLFLIF-MLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAAlQAVIYNRIGDIGLLLS-MVWLL 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 188 YGSNEPGLDLERLINQSypetlEILLYFGFLIAYAVKLPIIPLHTWLPDTHgEA--------HYSTcMLLAGILLkmgay 259
Cdd:MTH00211 186 LNLNSWEISQLFILNLD-----LTLFLLGLLLAAMGKSAQFGFHPWLPSAM-EGptpvsallHSST-MVVAGVFL----- 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 260 gLIRINMELLPHahYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGlngAILQILSHG 339
Cdd:MTH00211 254 -LIRLSPLFQNN--QLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQL---AFLHICTHA 327
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 2172622115 340 FIGATLFFLAGTA-SDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGF 394
Cdd:MTH00211 328 FFKAMLFMCSGSIiHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGF 383
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
7-394 |
3.32e-06 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 49.77 E-value: 3.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 7 LTILVVLPiFAGSLI--FFLPHKGNKIVRWYTISICLLEFLLMTYAFCYHFQLEDPLIQLKEdYKWIDV--FDFHWRLGI 82
Cdd:PRK06590 5 LWLIVLLP-LIGALIlgLFGRRIGEKWAHLVGTGLVGLSALLSLVVFFDFLLGGGRAFSQTL-WTWISVgdFDVDFGLRV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 83 DGLSLGSILLTGFITTLATLAAWPITRN----SRLFYFLML---AMysgqIGLFSSRDLLLFFIMWELELIPVYLLLSMW 155
Cdd:PRK06590 83 DGLSATMLVVVTGVSFLVHIYSIGYMAHdegyRRFFAYLNLftfSM----LMLVLSDNLLQLFFGWEGVGLCSYLLIGFW 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 156 GGKRRLYSATK--FILyTAGGSIFFLIGVLGMGLY-GSNEPGlDLERLINQSYPETLEILLYFGFL--IAYAVKLPIIPL 230
Cdd:PRK06590 159 YKKPSAGAAAMkaFIV-NRVGDVGLALGIFLLFAEfGSLNYD-EVFAAAPQFFGLGWSALTLICLLlfIGAMGKSAQFPL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 231 HTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLIRIN--MELLPHAHYlfspWLVIIGAIQIIYAASTSLGQRNF 301
Cdd:PRK06590 237 HTWLPDamegpTPVSAliHAAT-MVTAGVYL------VARMSplFELSPEALL----FVAIVGAVTALFAAFIGLVQTDI 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 302 KKRIAYSSVS---HMGFIIIGIGSitniglNGAILQILSHGFIGATLFFLAGTASDRMRL-VYLEELGGISIPMPKIFTM 377
Cdd:PRK06590 306 KRVLAYSTMSqlgYMFLALGVGAY------AAAIFHLMTHAFFKALLFLGAGSVIHAMHHeQDIRKMGGLRKKMPVTYAT 379
|
410
....*....|....*..
gi 2172622115 378 FSSFSMASLALPGMSGF 394
Cdd:PRK06590 380 FLIGTLALIGIPPFAGF 396
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
66-432 |
4.12e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 49.54 E-value: 4.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 66 EDYKWIDVFDFHWRLGIDGLSLGSILLTGFITTLATL--AAWPITRNSRLFYF--LMLAMYSGQIGLFSSRDLLLFFIMW 141
Cdd:PRK12644 56 EVVPWIPSLGLDLAFRLDALAALMSLLVLGVGALVLLycARYFDDDEPRLGRFaaELVAFAGAMFGLVTSDNLLLLYVFW 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 142 ELELIPVYLLLSMWGGK---RRlySATKFILYTAGGSIFFLIGVLGMG-LYGSNEpgldLERLINQSYPETLEILLYFGF 217
Cdd:PRK12644 136 ELTTVLSFLLIGHYAERaasRR--AALQALLVTTAGGLAMLVGIIILGqAAGTYR----LSELLADPPTGPAVSVAVVLI 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 218 LIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRinmeLLPHAHYLfSPWLVII---GAIQIIYAAST 294
Cdd:PRK12644 210 LVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVAR----LAPGFADV-PVWRPTVlvlGLATMLLGGWR 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 295 SLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKI 374
Cdd:PRK12644 285 ALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVL 364
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2172622115 375 FtMFSSFSMASLA-LPGMSGFVAELVVFFGLITSPKfLLMPKTLITFVMAIGMILTPIY 432
Cdd:PRK12644 365 A-VVAALAAASMAgLPPLLGFVAKEAALEAVLHDGA-LGPAGPVVLAGIVLGSILTVAY 421
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
112-313 |
3.88e-05 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 46.17 E-value: 3.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 112 RLFYFLMLaMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMW-GGKRRLYSATKFILYTAGGSIFFLIGVLGM----G 186
Cdd:PRK07376 123 RFFAYLSL-FSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWyDRKGAADAAQKAFVVNRVGDFGLLLGILGLfwatG 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 187 LYGSNEPGLDLERLINQ-SYPETLEILLYFGFLIAYAVKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMGA 258
Cdd:PRK07376 202 SFDFDGIADRLSELVSSgAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGVFLVARM 280
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2172622115 259 YGLirinMELLPHAHYLfspwLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHM 313
Cdd:PRK07376 281 YPV----FEQFPAVMTV----IAWTGAITAFLGASIALTQNDIKKGLAYSTISQL 327
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
116-313 |
7.63e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 44.96 E-value: 7.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 116 FLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRLYSATK-FILYTAGGSIFFLIGVLGMGLYGSNepg 194
Cdd:MTH00200 8 LFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKyFIIQATASALLLFGGLLNAWTSGQW--- 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 195 ldlerlinqSYPETLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHY 274
Cdd:MTH00200 85 ---------GISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILL 155
|
170 180 190
....*....|....*....|....*....|....*....
gi 2172622115 275 LFSPWLVIIGAIQiiyaastSLGQRNFKKRIAYSSVSHM 313
Cdd:MTH00200 156 LLGLLSVLVGGWG-------GLNQTQLRKILAYSSIAHL 187
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
111-308 |
8.85e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 44.77 E-value: 8.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 111 SRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRLYSATKFILYTAGGSIFFLIGVlgmGLYGS 190
Cdd:PRK06591 114 KSLFYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAI---GFLLS 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 191 NEPGLDL----ERLINQSYPETLEILLYFgFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIR--- 263
Cdd:PRK06591 191 ITGSLNMtdiaAYLQEHTNSRIITIAIGF-FLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKfty 269
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2172622115 264 --INMELLPHAHYLFspwLVIIGAIQIIYAASTSLGQRNFKKRIAYS 308
Cdd:PRK06591 270 iiIGYETIKTAITNF---IRPIALATLIIAPYFAYQAKNFKNIIIYS 313
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
113-394 |
1.16e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 44.61 E-value: 1.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 113 LFYFLMlamysgqIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRL-YSATKFILYTAGGSIFFLIGVLGM-GLYGS 190
Cdd:MTH00210 119 LFTFLM-------IVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKAnKAAIKAMLINRVGDIGLVLAMIMIlKEFGT 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 191 NEPGLDLERLINQSYPETLEILLYFGFLIAYAvKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRiNMELLP 270
Cdd:MTH00210 192 LEFSTISSLLVTNINKESLTIICLLLFIGAVG-KSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIR-SGPLFE 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 271 HAHyLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGlngAILQILSHGFIGATLFFLAG 350
Cdd:MTH00210 270 GSP-LALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYST---SLFHLMNHAFFKALLFLSAG 345
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2172622115 351 TA----SDR--MRlvyleELGGISIPMPKIFTMFSSFSMASLALPGMSGF 394
Cdd:MTH00210 346 SVihavSDEqdMR-----KMGGLIKSIPFTYVMILIGSLSLMGFPYLTGF 390
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
211-310 |
2.28e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 43.63 E-value: 2.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 211 ILLYFGFLIayavKLPIIPLH--TWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQI 288
Cdd:PRK06459 162 ILASFGFII----KMGMMPFLvsEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFGLTILAIGAFSI 237
|
90 100
....*....|....*....|..
gi 2172622115 289 IYAASTSLGQRNFKKRIAYSSV 310
Cdd:PRK06459 238 LFGALYAYVSENVKGLLAFSTI 259
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
114-475 |
4.99e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 42.18 E-value: 4.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 114 FYFLMLAMYSGQIGLFSSrDLLLFFIMWELELIPVYLLLSMWGGKRRLYSATKFILYTAGGSIFFLIGVLGMglygsnep 193
Cdd:MTH00144 7 LLFLFLMVMGTLLSLSSS-HWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIM-------- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 194 gldlerlinqsYPETLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGI--LLKMGAYGLIRINMELLPH 271
Cdd:MTH00144 78 -----------YNLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWqkVAPLFLLSNFLDLYWLAYL 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 272 ahylfspwLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIgatLFFLAGT 351
Cdd:MTH00144 147 --------LCVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFL---FFSLWSG 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 352 ASDRMRLVyleelggISIPMPKIFTMFSSFSMASLA-LPGMSGFVAELVVFFGLITSPKFLLMpktlitFVMAIGMILTP 430
Cdd:MTH00144 216 DSGSMKDL-------GSLKPSYKTGLSIISLLLSLGgLPPFLGFCSKLLVLISSMESSPLLLI------LLLLLGSLISL 282
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 2172622115 431 IYLLSMLRQMF-YGYKLFNVPNANFVdsgprelfILICIFLPVIGI 475
Cdd:MTH00144 283 FFYLSVFFSSFlSSSKSKKSNSSKVL--------NSSIISLNLLGG 320
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
5-496 |
6.06e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 42.33 E-value: 6.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 5 PWLTILVVLPIFAgSLIFFLPHKGNKIVRWYTI--SICLLEFLLMTYAFCYHFQledpliqlkeDYKWIDVFDFHWRLGI 82
Cdd:PRK06277 2 NLLPLMVVFPMIC-AIIFNLLHGKDKLIKYLTFivAILLPILPFLASYGYYYFG----------GHGLVNGYHSGITYLF 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 83 DGLSLGSILLTGFITTLATLAAWPITRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRLY 162
Cdd:PRK06277 71 NPAKQIIIFVLSLIASLVLITGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEEAYK 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 163 SATKF-ILYTAGGSIFfligVLGMGLYGSNEPGLDLERLINQSYPETLEILLYFGFLI-----AYAVKLPiiPLHTWLPD 236
Cdd:PRK06277 151 AALKYmILGNVAGSIL----LLGIGFLLASTGTLNITDIHNALLVNPTSPVIYGGLLLlifglLYGSGLP--PFHTIKSD 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 237 THGEAH-YSTCMLLAGILLKMGAYGLIRINM----ELLPHAHYLfspwLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVS 311
Cdd:PRK06277 225 IYAKAKpFGSALLQTFSKFVLVALMLVIFKLfgglSYFPSAQGV----LIALSVLAMVFGVVMALLQTDYKRLLAYHAIS 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 312 HMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGM 391
Cdd:PRK06277 301 QGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPF 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 392 SGFVAELVvffgLITSPKFLLMPKtlitfvMAIGMILTPIYLLSMLRQMFYGYKLFNVPNANFVDSGP---RELFILICI 468
Cdd:PRK06277 381 NGFQSKLM----LAQAAMQANMPE------LAIIMIIVSIGTFVSMMKAFYLIYLKPKPEELEYKNKKvpkYAVFSLAVL 450
|
490 500
....*....|....*....|....*...
gi 2172622115 469 FLPVIGIGIYPDFVLSLSADRVEALLSN 496
Cdd:PRK06277 451 TILCIILGLFPDLVTNYLYPFANEIGRN 478
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
115-313 |
1.00e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 41.20 E-value: 1.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 115 YFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRLYSATKFILYTAGGSIFFLIGVLGMglygsnepg 194
Cdd:MTH00197 1 FLFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLS--------- 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 195 ldlerlinqSYPETLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAgILLKMGAYGLIRINMELlphahy 274
Cdd:MTH00197 72 ---------FSNLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLA-TWQKLAPLLILAFNSSS------ 135
|
170 180 190
....*....|....*....|....*....|....*....
gi 2172622115 275 lfSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHM 313
Cdd:MTH00197 136 --FMGLLICSVLSSLIGGIGGMNQSNIRQLLAYSSIGHT 172
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
5-443 |
1.09e-03 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 41.83 E-value: 1.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 5 PWLTILVVLPIFAGSLIFFLPHKGNKI-VRWYtisICLLEFLLMTYAFCYHFQLEDPLIqLKEDYKWIDVFDFHWRLGID 83
Cdd:PRK12645 2 SLLHIAILLPFIFALLIPFLYKYFKRIhTGWF---VLPVPVVLFIYFLSLIPTTMSGNT-VMKTLPWIPSLGINFTLYVD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 84 GLSL-GSILLTGfITTLATLaaWPI----TRNSRL--FY-FLMLAMySGQIGLFSSRDLLLFFIMWELELIPVYLLLSMW 155
Cdd:PRK12645 78 GLSLlFALLITG-IGSLVVL--YSIyylsKKKEQLgnFYvYLLLFM-GAMLGVVLSDNLIVLYLFWELTSISSFLLISYW 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 156 GGKRR-LYSATKFILYTAGGSIFFLIGVLGMGLYG---SNEPGLDLERLINQSYPETLEILLyfgFLIAYAVKLPIIPLH 231
Cdd:PRK12645 154 YEREAsRYGAQKSMLITVFGGLSMLGGFILLYIMTgsfSIREMIANADEIQNSPLFIPAMIL---ILLGAFTKSAQFPFY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 232 TWLPD-----THGEAH-YSTCMLLAGIllkmgaYGLIRinmellphahylFSP---------WLV-IIGAIQIIYAASTS 295
Cdd:PRK12645 231 IWLPDameapTPVSAYlHSATMVKAGI------YLVAR------------FTPifagsqvwfWTVtLVGLITLFWGSLNA 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 296 LGQRNFKKRIAYSSVSHM-------------GFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLE 362
Cdd:PRK12645 293 VKQTDLKGILAFSTVSQLglimsllgigaasLHYQGDDSKIYAAAITAAIFHLINHATFKGSLFMIVGIVDHETGTRDIR 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 363 ELGGISIPMPKIFT--MFSSFSMAslALPGMSGFVAELVVFFGLITSPKFLLMPKT----LITFVMAIGMILTPIYLLSM 436
Cdd:PRK12645 373 KLGGLMTIMPITFTiaLIGALSMA--GLPPFNGFLSKEMFFESMLNATEANLFSLDtwgvLFPVIAWVASVFTFVYSIIF 450
|
....*..
gi 2172622115 437 LRQMFYG 443
Cdd:PRK12645 451 IFKTFFG 457
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
211-348 |
1.13e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 41.45 E-value: 1.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 211 ILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQIIy 290
Cdd:MTH00062 165 LIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVFFLI- 243
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 2172622115 291 aasTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFL 348
Cdd:MTH00062 244 ---TACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLL 298
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
218-432 |
3.16e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 40.13 E-value: 3.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 218 LIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELlpHAHYLFSPWLVIIGAIQIIYAASTSLG 297
Cdd:MTH00207 186 MIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFL--SSTYWFNPALLLTASLTMLMAGLSAMT 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 298 QRNFKKRIAYSSVSHMGFIIIGIGSITNiglNGAILQILSHGFIGATLFFLAGT-ASDRMRLVYLEELGGISIPMPkiFT 376
Cdd:MTH00207 264 ECDMKKIIALSTLSQLGVMMASLGLGMP---KLALFHLITHALFKALLFVCAGSlIHSHHHSQDLRTMGNLTNQMP--LT 338
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2172622115 377 MfSSFSMASLAL---PGMSGF-----VAELVVFFGLITSPKFLLMPKTLITFVMAIGMILTPIY 432
Cdd:MTH00207 339 T-SCLLIANLALcgsPFLSGFyskdlILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLW 401
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
113-311 |
8.76e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 38.74 E-value: 8.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 113 LFYFLmLAMysgqIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRLYSAT-KFILYTAGGSIFFLigvLGMGLYGSN 191
Cdd:MTH00066 119 LLIFL-IAM----MILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAAlQAVLYNRVGDIGLI---LSMAWLAMN 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172622115 192 EPGLDLERLINQSYPETLEILlyfGFLIAYAVKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLIRI 264
Cdd:MTH00066 191 TNSWELQQIFLLNDNSTLPLL---GLILAAAGKSAQFGLHPWLPAamegpTPVSAllHSST-MVVAGIFL------LIRF 260
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2172622115 265 NmELLPHAHYLFSPWLVIiGAIQIIYAASTSLGQRNFKKRIAYSSVS 311
Cdd:MTH00066 261 H-PLLENNQTALTICLCL-GALTTLFTAACALTQNDIKKIVAFSTSS 305
|
|
| |
