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Conserved domains on  [gi|2206973313|ref|YP_010292360|]
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NADH dehydrogenase subunit 6 (mitochondrion) [Heniocha dyops]

Protein Classification

NADH dehydrogenase subunit 6( domain architecture ID 10009599)

NADH dehydrogenase subunit 6 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND6 MTH00166
NADH dehydrogenase subunit 6; Provisional
 3-177 2.08e-26

NADH dehydrogenase subunit 6; Provisional


:

Pssm-ID: 214445  Cd Length: 160  Bit Score: 97.95  E-value: 2.08e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973313   3 KILISSLISFSSLMMYFLMHPLSMGLMILIQTFLICLLSGMIIKTYWFSYILFLTFLGGLLVLFIYVSSIASNELFSFNF 82
Cdd:MTH00166    1 KMMLMMLLLILSIIFLFLNHPLSMGLILIIQTILISLLLGLMMKSFWFSYILFLIFLGGMLVLFIYITSLASNEKFKFSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973313  83 KMKLFLIMCLIFMICLLILFNHNLKWINLNMNNPEMINYKEymnlflnnnkinlnkLYNKQTFMLTFLMIIYLFIALITM 162
Cdd:MTH00166   81 KLLILFLLMLLLMLNNFIKNSEMSNFNNNFNFFENSFSLSK---------------LYNFPTMLITLFMIIYLLLTLIVV 145

                         170
                  ....*....|....*
gi 2206973313 163 VKITNIFYGPLRSNF 177
Cdd:MTH00166  146 VKITNIFKGPLRSKN 160
 
Name Accession Description Interval E-value
ND6 MTH00166
NADH dehydrogenase subunit 6; Provisional
 3-177 2.08e-26

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214445  Cd Length: 160  Bit Score: 97.95  E-value: 2.08e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973313   3 KILISSLISFSSLMMYFLMHPLSMGLMILIQTFLICLLSGMIIKTYWFSYILFLTFLGGLLVLFIYVSSIASNELFSFNF 82
Cdd:MTH00166    1 KMMLMMLLLILSIIFLFLNHPLSMGLILIIQTILISLLLGLMMKSFWFSYILFLIFLGGMLVLFIYITSLASNEKFKFSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973313  83 KMKLFLIMCLIFMICLLILFNHNLKWINLNMNNPEMINYKEymnlflnnnkinlnkLYNKQTFMLTFLMIIYLFIALITM 162
Cdd:MTH00166   81 KLLILFLLMLLLMLNNFIKNSEMSNFNNNFNFFENSFSLSK---------------LYNFPTMLITLFMIIYLLLTLIVV 145

                         170
                  ....*....|....*
gi 2206973313 163 VKITNIFYGPLRSNF 177
Cdd:MTH00166  146 VKITNIFKGPLRSKN 160
 
Name Accession Description Interval E-value
ND6 MTH00166
NADH dehydrogenase subunit 6; Provisional
 3-177 2.08e-26

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214445  Cd Length: 160  Bit Score: 97.95  E-value: 2.08e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973313   3 KILISSLISFSSLMMYFLMHPLSMGLMILIQTFLICLLSGMIIKTYWFSYILFLTFLGGLLVLFIYVSSIASNELFSFNF 82
Cdd:MTH00166    1 KMMLMMLLLILSIIFLFLNHPLSMGLILIIQTILISLLLGLMMKSFWFSYILFLIFLGGMLVLFIYITSLASNEKFKFSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973313  83 KMKLFLIMCLIFMICLLILFNHNLKWINLNMNNPEMINYKEymnlflnnnkinlnkLYNKQTFMLTFLMIIYLFIALITM 162
Cdd:MTH00166   81 KLLILFLLMLLLMLNNFIKNSEMSNFNNNFNFFENSFSLSK---------------LYNFPTMLITLFMIIYLLLTLIVV 145

                         170
                  ....*....|....*
gi 2206973313 163 VKITNIFYGPLRSNF 177
Cdd:MTH00166  146 VKITNIFKGPLRSKN 160
ND6 MTH00212
NADH dehydrogenase subunit 6; Provisional
 1-174 2.32e-06

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214460  Cd Length: 160  Bit Score: 45.38  E-value: 2.32e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973313   1 MTKILISSLISFSSLMMYFLMHPLSMGLMILIQTFLICLLSGMIIKTyWFSYILFLTFLGGLLVLFIYVSSIASNELFSF 80
Cdd:MTH00212    1 MLLSLLLSLLLLLMLLFPLSAHPLTLGVSLLLSSLLSCLIITMESNS-WYGYILFLIYIGGLLVLFGYMVALSPNEHLFF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973313  81 NFKMKLFLIMCLIFMICLLILFNHNLKWINLNMNNPEminykeymnlflnnnkINLNKLYNKQTFMLTFLMIIYLFIALI 160
Cdd:MTH00212   80 KKYFKGFGMILISLNLYLLLMTLGSSNFSPMLNLKLE----------------LNVSKILSNNNIPILLFLGLILLIALL 143

                         170
                  ....*....|....
gi 2206973313 161 TMVKITNIFYGPLR 174
Cdd:MTH00212  144 MVVKICQYYKGPLR 157
ND6 MTH00152
NADH dehydrogenase subunit 6; Provisional
 1-102 1.58e-04

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214437  Cd Length: 163  Bit Score: 40.26  E-value: 1.58e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973313   1 MTKILISSLISFSSLMMYFLMHPLSMGLMILIQTFLICLLSGMIIkTYWFSYILFLTFLGGLLVLFIYVSSIASNELFSF 80
Cdd:MTH00152    1 MSLMILLSVCFSLFLLLPLSKQPLSLGLVLLLLSLFVCVEIGLTL-SSWYGYLLFLVYVGGLLVMFAYVVSLSPNPLFGS 79

                          90       100
                  ....*....|....*....|..
gi 2206973313  81 NFKMKLFLIMCLIFMICLLILF 102
Cdd:MTH00152   80 NFKFVFFSLTLFGFLGLFFFFL 101
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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