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Conserved domains on  [gi|2206973349|ref|YP_010292393|]
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ATP synthase F0 subunit 6 (mitochondrion) [Nudaurelia wahlbergi]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 4.87e-78

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 233.91  E-value: 4.87e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349   1 MMNNLFSIFDPSTNiLNLQINWLSIFLSFLFLPYMFWLTPNRHIIIWKFIMMKLHNEFKILLKNNyFKGSTFIFISLFSF 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349  81 IFFNNFLGLFPYIFTSTSHLSLSLSMSLPLWLSFMLYGWLNNYQHMFIHMIPQSTPTILMPFMVLIETISNIIRPSTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2206973349 161 RLSANMIAGHLLMTLLSNMSSIISSYLIIILIFTQILLLTLESAVAMIQSYVITILSTLYSNEVN 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 4.87e-78

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 233.91  E-value: 4.87e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349   1 MMNNLFSIFDPSTNiLNLQINWLSIFLSFLFLPYMFWLTPNRHIIIWKFIMMKLHNEFKILLKNNyFKGSTFIFISLFSF 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349  81 IFFNNFLGLFPYIFTSTSHLSLSLSMSLPLWLSFMLYGWLNNYQHMFIHMIPQSTPTILMPFMVLIETISNIIRPSTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2206973349 161 RLSANMIAGHLLMTLLSNMSSIISSYLIIILIFTQILLLTLESAVAMIQSYVITILSTLYSNEVN 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-225 1.15e-28

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 107.29  E-value: 1.15e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349   5 LFSIFDPST-NILNLQINWLSIFLS----FLFLPYMFWLTPNRHIIIWKFIMMKLHNEFKILLKNNYFKgSTFIFISLFS 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSllifLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGK-FFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349  80 FIFFNNFLGLFPYIFTSTSHLSLSLSMSLPLWLSFMLYGWLNNYQHMFIHMIPQSTPTILMPFMVLIETISNIIRPSTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2206973349 160 VRLSANMIAGHLLMTLLSNMSSIISSYLIIILIFT-QILLLTLESAVAMIQSYVITILSTLYSNEVN 225
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMSSAIFALLLLiLVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 84-222 5.82e-27

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 100.94  E-value: 5.82e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349  84 NNFLGLFPYIFTSTSHLSLSLSMSLPLWLSFMLYGWLNNYQHMFIHMIPQSTPTILMPFMVLIETISNIIRPSTLAVRLS 163
Cdd:cd00310    18 SNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIRPLSLSVRLF 97

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2206973349 164 ANMIAGHLLMTLLSNMSSIISSYLIIILIFTQILLLTLESAVAMIQSYVITILSTLYSN 222
Cdd:cd00310    98 ANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
125-220 7.23e-15

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 70.60  E-value: 7.23e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349 125 HMFIHMIPQSTPTILMPFMVLIETISNIIRPSTLAVRLSANMIAGHLLMTLLSNMSSIISSYLIIILIFT---QILLLTL 201
Cdd:pfam00119 116 GYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIPpllGVAWTLF 195

                          90
                  ....*....|....*....
gi 2206973349 202 ESAVAMIQSYVITILSTLY 220
Cdd:pfam00119 196 ELLVAFIQAYVFTMLTAVY 214
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 138-220 2.64e-10

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 57.78  E-value: 2.64e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349 138 ILMPFMVLIETISNIIRPSTLAVRLSANMIAGHLLMTLLSNMssIISSYLIIILIFTQILLLTLESAVAMIQSYVITILS 217
Cdd:COG0356   125 WLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGL--APFLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLT 202


                  ...
gi 2206973349 218 TLY 220
Cdd:COG0356   203 AVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 4.87e-78

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 233.91  E-value: 4.87e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349   1 MMNNLFSIFDPSTNiLNLQINWLSIFLSFLFLPYMFWLTPNRHIIIWKFIMMKLHNEFKILLKNNyFKGSTFIFISLFSF 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349  81 IFFNNFLGLFPYIFTSTSHLSLSLSMSLPLWLSFMLYGWLNNYQHMFIHMIPQSTPTILMPFMVLIETISNIIRPSTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2206973349 161 RLSANMIAGHLLMTLLSNMSSIISSYLIIILIFTQILLLTLESAVAMIQSYVITILSTLYSNEVN 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-224 2.18e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 122.45  E-value: 2.18e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349   1 MMNNLFSIFDP--STNILNLQINWLSIFLSFLFLPYMFWLTPNRHIIIWKfIMMKLHNEFKILLKNNYFKGSTFIFISLF 78
Cdd:MTH00176    1 MLVDLFSSFDPpnKNIFSMISLSWITLLLFLLLMPSSVWFCPSKLQVFML-MFSTFLPEMILRSNGSYILGSASIIISLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349  79 SFIFFNNFLGLFPYIFTSTSHLSLSLSMSLPLWLSFMLYGWLNNYQHMFIHMIPQSTPTILMPFMVLIETISNIIRPSTL 158
Cdd:MTH00176   80 ILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTL 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2206973349 159 AVRLSANMIAGHLLMTLLSNMSSIIS---SYLIIILIFTQILLLTLESAVAMIQSYVITILSTLYSNEV 224
Cdd:MTH00176  160 AVRLAANLSAGHLLLGLLGAAMWGLLpvsPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEH 228
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-225 1.15e-28

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 107.29  E-value: 1.15e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349   5 LFSIFDPST-NILNLQINWLSIFLS----FLFLPYMFWLTPNRHIIIWKFIMMKLHNEFKILLKNNYFKgSTFIFISLFS 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSllifLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGK-FFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349  80 FIFFNNFLGLFPYIFTSTSHLSLSLSMSLPLWLSFMLYGWLNNYQHMFIHMIPQSTPTILMPFMVLIETISNIIRPSTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2206973349 160 VRLSANMIAGHLLMTLLSNMSSIISSYLIIILIFT-QILLLTLESAVAMIQSYVITILSTLYSNEVN 225
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMSSAIFALLLLiLVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 84-222 5.82e-27

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 100.94  E-value: 5.82e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349  84 NNFLGLFPYIFTSTSHLSLSLSMSLPLWLSFMLYGWLNNYQHMFIHMIPQSTPTILMPFMVLIETISNIIRPSTLAVRLS 163
Cdd:cd00310    18 SNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIRPLSLSVRLF 97

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2206973349 164 ANMIAGHLLMTLLSNMSSIISSYLIIILIFTQILLLTLESAVAMIQSYVITILSTLYSN 222
Cdd:cd00310    98 ANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-223 2.59e-25

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 98.87  E-value: 2.59e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349   1 MMNNLFSIFDpSTNILNLQINWLSIFLSFLFLPYM-FWLTPNRHIIIWKFIMMKLHNEFKILLKNNYFKGStFIFISLFS 79
Cdd:MTH00179    1 MMLSMFDQFE-SPSLLGIPLLALALLLPWLLFPSLtNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWA-VLFLSLML 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349  80 FIFFNNFLGLFPYIFTSTSHLSLSLSMSLPLWLSFMLYGWLNNYQHMFIHMIPQSTPTILMPFMVLIETISNIIRPSTLA 159
Cdd:MTH00179   79 FLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALG 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2206973349 160 VRLSANMIAGHLLMTLLSNMSSIISSYLIIILIFTQ---ILLLTLESAVAMIQSYVITILSTLYSNE 223
Cdd:MTH00179  159 VRLTANITAGHLLMHLISSAVFVLMNFMGMVALLTLlvlFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-223 9.85e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 94.80  E-value: 9.85e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349   1 MMNNLFSIFDPSTNILNLQIN----WLSIFLSFLFLPYMFWLTPNRHIIIWKFIMMKLHNEFKILLKNNyFKGSTFIFIS 76
Cdd:MTH00005    1 MLTDIFSSFDPATNSLFNNLSstafWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKH-LKGFSSLISA 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349  77 LFSFIFFNNFLGLFPYIFTSTSHLSLSLSMSLPLWLSFMLYGWLNNYQHMFIHMIPQSTPTILMPFMVLIETISNIIRPS 156
Cdd:MTH00005   80 LFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPI 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349 157 TLAVRLSANMIAGHLLMTLL---SNMSSIISSYLIIILIFTQILLLTLESAVAMIQSYVITILSTLYSNE 223
Cdd:MTH00005  160 TLSFRLAANMSAGHIVLSLIgiyAASALFSSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 1-220 1.25e-21

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 88.86  E-value: 1.25e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349   1 MMNNLFSIFDPSTnILNLQINWLSIFLSFLFLPYMFWLTPNRHIIIWKFI-------MMKLHNEfkillknnyfKGST-- 71
Cdd:MTH00101    1 MNENLFASFITPT-ILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLiqltskqMMTIHNT----------KGQTws 69

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349  72 FIFISLFSFIFFNNFLGLFPYIFTSTSHLSLSLSMSLPLWLSFMLYGWLNNYQHMFIHMIPQSTPTILMPFMVLIETISN 151
Cdd:MTH00101   70 LMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISL 149

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2206973349 152 IIRPSTLAVRLSANMIAGHLLMTLLSN--MSSIISSYLIIILIFTQILLLT-LESAVAMIQSYVITILSTLY 220
Cdd:MTH00101  150 FIQPMALAVRLTANITAGHLLIHLIGGatLALMSISTTTALITFIILILLTiLEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-223 4.86e-21

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 87.61  E-value: 4.86e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349   1 MMNNLFSIFDPSTNILNLQ--INWLSIFLSFLFLPYMFWLTPNRHIIIWKFIMMKLHNEFKILLKNNyFKGSTFIFISLF 78
Cdd:MTH00173    1 MMVDLFSSFDDHNSSFSSLsfLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLN-LGGFSLLLSSLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349  79 SFIFFNNFLGLFPYIFTSTSHLSLSLSMSLPLWLSFMLYGWLNNYQHMFIHMIPQSTPTILMPFMVLIETISNIIRPSTL 158
Cdd:MTH00173   80 LFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTL 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2206973349 159 AVRLSANMIAGHLLMTLLSNMSSIISSYLIIILIFT----QILLLTLESAVAMIQSYVITILSTLYSNE 223
Cdd:MTH00173  160 TVRLLANISAGHIVLTLIGNYLSSSLFSSSVVSLLLvlliQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 85-223 6.06e-21

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 87.19  E-value: 6.06e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349  85 NFLGLFPYIFTSTSHLSLSLSMSLPLWLSFMLYGWLNNYQHMFIHMIPQSTPTILMPFMVLIETISNIIRPSTLAVRLSA 164
Cdd:MTH00120   84 NLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTA 163

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2206973349 165 NMIAGHLLMTLLSNMSSIISSYLIIILIFTQILLL---TLESAVAMIQSYVITILSTLYSNE 223
Cdd:MTH00120  164 NLTAGHLLIQLISTATLNLLPTMPTLSLLTLIILLlltILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 85-223 8.89e-21

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 86.85  E-value: 8.89e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349  85 NFLGLFPYIFTSTSHLSLSLSMSLPLWLSFMLYGWLNNYQHMFIHMIPQSTPTILMPFMVLIETISNIIRPSTLAVRLSA 164
Cdd:MTH00132   84 NMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVRLTA 163

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2206973349 165 NMIAGHLLMTLLSNMSSIISSYLIIILIFTQILLL---TLESAVAMIQSYVITILSTLYSNE 223
Cdd:MTH00132  164 NLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFlltLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 85-223 1.31e-19

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 83.48  E-value: 1.31e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349  85 NFLGLFPYIFTSTSHLSLSLSMSLPLWLSFMLYGWLNNYQHMFIHMIPQSTPTILMPFMVLIETISNIIRPSTLAVRLSA 164
Cdd:MTH00073   84 NLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGVRLTA 163

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2206973349 165 NMIAGHLLMTLLSN--MSSIISSYLIIILIFTQILLLT-LESAVAMIQSYVITILSTLYSNE 223
Cdd:MTH00073  164 NLTAGHLLIQLISTatLVLLPLMPTVSILTMIVLFLLTlLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-220 1.03e-18

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 81.17  E-value: 1.03e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349   3 NNLFSIFDPST-NILNLQINWLSIFLSFLFLPYMFWLTPNRHIIIWKFImmkLHNEFKILLKNNYFKGS--TFIFISLFS 79
Cdd:MTH00035    5 NSIFGQFSPDTiLFIPLTLLSSVIALSWLFFINPTNWLPSRSQSIWLTF---RQEILKLIFQNTNPNTApwAGLLTTVFI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349  80 FIFFNNFLGLFPYIFTSTSHLSLSLSMSLPLWLSFMLYGWLNNYQHMFIHMIPQSTPTILMPFMVLIETISNIIRPSTLA 159
Cdd:MTH00035   82 LILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALG 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2206973349 160 VRLSANMIAGHLLMTLLSNM--SSIISSYLIIILIFTQILLLTLESAVAMIQSYVITILSTLY 220
Cdd:MTH00035  162 LRLAANLTAGHLLIFLLSTAiwELSNSPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFY 224
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 85-220 1.78e-15

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 72.73  E-value: 1.78e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349  85 NFLGLFPYIFTSTSHLSLSLSMSLPLWLSFMLYGWLNNYQHMFIHMIPQSTPTILMPFMVLIETISNIIRPSTLAVRLSA 164
Cdd:MTH00175   97 NILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAA 176

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349 165 NMIAGHLLMTLLS----NMSSIISSYLIIILIFTQILLLTLESAVAMIQSYVITILSTLY 220
Cdd:MTH00175  177 NISAGHLLFAILSgfafNMLSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIY 236
ATP-synt_A pfam00119
ATP synthase A chain;
125-220 7.23e-15

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 70.60  E-value: 7.23e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349 125 HMFIHMIPQSTPTILMPFMVLIETISNIIRPSTLAVRLSANMIAGHLLMTLLSNMSSIISSYLIIILIFT---QILLLTL 201
Cdd:pfam00119 116 GYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIPpllGVAWTLF 195

                          90
                  ....*....|....*....
gi 2206973349 202 ESAVAMIQSYVITILSTLY 220
Cdd:pfam00119 196 ELLVAFIQAYVFTMLTAVY 214
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 85-220 3.06e-14

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 69.30  E-value: 3.06e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349  85 NFLGLFPYIFTSTSHLSLSLSMSLPLWLSFMLYGWLNNYQHMFIHMIPQSTPTILMPFMVLIETISNIIRPSTLAVRLSA 164
Cdd:MTH00172   86 NLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAA 165

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2206973349 165 NMIAGHLLMTLLSNMSSIISSYLIIILIF---TQILLLTLESAVAMIQSYVITILSTLY 220
Cdd:MTH00172  166 NLSAGHLLFAILAGFGFNMLCASGFLSLFpllIMVFITLLEIAVAVIQAYVFCLLTTIY 224
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 138-220 2.64e-10

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 57.78  E-value: 2.64e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349 138 ILMPFMVLIETISNIIRPSTLAVRLSANMIAGHLLMTLLSNMssIISSYLIIILIFTQILLLTLESAVAMIQSYVITILS 217
Cdd:COG0356   125 WLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGL--APFLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLT 202


                  ...
gi 2206973349 218 TLY 220
Cdd:COG0356   203 AVY 205
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 85-220 1.01e-09

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 56.87  E-value: 1.01e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349  85 NFLGLFPYIFTSTSHLSLSLSMSLPLWLSFMLYGWLNNYQHMFIHMIPQSTPTILMPFMVLIETISNIIRPSTLAVRLSA 164
Cdd:MTH00174  105 NGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAA 184

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349 165 NMIAGHLLMTLLSNMSSIISSYLIIILIFTQ----ILLLTLESAVAMIQSYVITILSTLY 220
Cdd:MTH00174  185 NISSGHLLFSIIASFAWKMINTGILIGSFVPfailIFVTILEMAVAIIQAYVFTLLTIVY 244
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 140-220 3.92e-08

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 52.10  E-value: 3.92e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349 140 MPFMVLIETISNIIRPSTLAVRLSANMIAGHLLMTLLSNMSSIISSYLIIILIFTqILLLTLESAVAMIQSYVITILSTL 219
Cdd:PRK05815  139 HPLLLPIEIISEFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLALAPLILP-VAWTIFEIFVGTLQAYIFMMLTIV 217


                  .
gi 2206973349 220 Y 220
Cdd:PRK05815  218 Y 218
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 114-220 1.34e-04

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 42.18  E-value: 1.34e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349 114 FMLYGWLNNYQ--HMFIHMIPQSTPTILMPFMVLIETI-SNIIRPSTLAVRLSANMIAGH-LLMTLLSNMSSIISSYLII 189
Cdd:PRK13417  234 FLIYGAGFSYQgpKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHvIILALMGFIFQFQSWGIVP 313

                          90       100       110
                  ....*....|....*....|....*....|.
gi 2206973349 190 ILIFTQILLLTLESAVAMIQSYVITILSTLY 220
Cdd:PRK13417  314 VSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 135-220 1.69e-04

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 41.65  E-value: 1.69e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349 135 TPTILMPFMVLIETISNIIRPSTLAVRLSANMIAGH---LLMTLLSNMSSIISSYLIIILIFTqILLLTLESAVAMIQSY 211
Cdd:PRK13419  235 THWSLWIIMIPIEFIGLFTKPFALTVRLFANMTAGHiviLSLIFISFILKSYIVAVAVSVPFA-IFIYLLELFVAFLQAY 313


                  ....*....
gi 2206973349 212 VITILSTLY 220
Cdd:PRK13419  314 IFTMLSALF 322
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 127-223 3.33e-04

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 40.35  E-value: 3.33e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973349 127 FIHMIPQSTPTILMPF-MVLIETISNIIRPSTLAVRLSANMIAGHLLMTLLSNMssiissylIIILIFTQILLLTLESAV 205
Cdd:MTH00087  106 FSVYLSKGSDSFLKTFsMLFVEIVSELSRPLALTLRLTVNLMVGHLISSLLNFL--------GEKYVWLSILAIMMECFV 177

                          90
                  ....*....|....*...
gi 2206973349 206 AMIQSYVITILSTLYSNE 223
Cdd:MTH00087  178 AFIQSYIFSRLIYLYLNE 195
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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