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Conserved domains on  [gi|2206973351|ref|YP_010292395|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Nudaurelia wahlbergi]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 12-116 3.97e-33

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 111.41  E-value: 3.97e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  12 TIFISNIIMILSIMMSKKSFMDREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIYLFKTTNFIIWM 91
Cdd:MTH00161    9 ILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWL 88

                          90       100
                  ....*....|....*....|....*
gi 2206973351  92 KT*FFFMIILLLGIYHEWNQNMLMW 116
Cdd:MTH00161   89 ITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 12-116 3.97e-33

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 111.41  E-value: 3.97e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  12 TIFISNIIMILSIMMSKKSFMDREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIYLFKTTNFIIWM 91
Cdd:MTH00161    9 ILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWL 88

                          90       100
                  ....*....|....*....|....*
gi 2206973351  92 KT*FFFMIILLLGIYHEWNQNMLMW 116
Cdd:MTH00161   89 ITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-114 2.77e-19

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 75.92  E-value: 2.77e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  20 MILSIMMSKKSFmDREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIYLFKtTNFIIWMKT*FFFMI 99
Cdd:pfam00507   1 LLLSRLLGPKRP-NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*
gi 2206973351 100 ILLLGIYHEWNQNML 114
Cdd:pfam00507  79 ILLVGLVYAWKKGAL 93
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 13-116 9.50e-17

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 70.15  E-value: 9.50e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  13 IFISNIIMILSIMMSKKSfMDREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIYLFKTTNFIIWMk 92
Cdd:COG0838    16 LGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWFGLI- 93

                          90       100
                  ....*....|....*....|....
gi 2206973351  93 T*FFFMIILLLGIYHEWNQNMLMW 116
Cdd:COG0838    94 EMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 12-116 3.97e-33

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 111.41  E-value: 3.97e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  12 TIFISNIIMILSIMMSKKSFMDREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIYLFKTTNFIIWM 91
Cdd:MTH00161    9 ILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWL 88

                          90       100
                  ....*....|....*....|....*
gi 2206973351  92 KT*FFFMIILLLGIYHEWNQNMLMW 116
Cdd:MTH00161   89 ITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 13-117 1.12e-31

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 108.02  E-value: 1.12e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  13 IFISNIIMILSIMMSKKSFMDREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIYLFKTTNFIIWMK 92
Cdd:MTH00148   12 LILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFSVWSLT 91

                          90       100
                  ....*....|....*....|....*
gi 2206973351  93 T*FFFMIILLLGIYHEWNQNMLMWT 117
Cdd:MTH00148   92 SLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 13-116 3.57e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 99.30  E-value: 3.57e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  13 IFISNIIMILSIMMSKKSFMDREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIYLFKTTNFIIWMK 92
Cdd:MTH00202   12 ILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGLL 91

                          90       100
                  ....*....|....*....|....
gi 2206973351  93 T*FFFMIILLLGIYHEWNQNMLMW 116
Cdd:MTH00202   92 GGTIFLLILIGGLIHEWKEGSLDW 115
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 18-117 3.34e-24

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 89.15  E-value: 3.34e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  18 IIMILSIMMSKKSFMDREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIYLFKTTNFIIWMKT*FFF 97
Cdd:MTH00012   17 LVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVYTSILF 96

                          90       100
                  ....*....|....*....|
gi 2206973351  98 MIILLLGIYHEWNQNMLMWT 117
Cdd:MTH00012   97 LLILVIGLIHEWREGSLDWS 116
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 35-117 3.89e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 83.84  E-value: 3.89e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  35 EKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIYLFKTTNFIIWMKT*FFFMIILLLGIYHEWNQNML 114
Cdd:MTH00106   32 EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALSLAYEWTQKGL 111


                  ...
gi 2206973351 115 MWT 117
Cdd:MTH00106  112 EWT 114
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 15-116 3.30e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 78.81  E-value: 3.30e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  15 ISNIIMI---LSIMMSKKSFM------DREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIY---LF 82
Cdd:MTH00136    4 ITTILTItiaLSLILAIVSFWlpqmtpDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWgdqLP 83

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2206973351  83 KTTNFIIWMKT*fffMIILLLGIYHEWNQNMLMW 116
Cdd:MTH00136   84 SPLLTFFWATAV---LILLTLGLIYEWLQGGLEW 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 13-118 4.24e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 78.48  E-value: 4.24e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  13 IFISNIIMILSIMMSKKSFM-----DREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIYLFKTTNF 87
Cdd:MTH00042    6 FFLLIILILTSLLLLAGHFLpsrspDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLITNP 85

                          90       100       110
                  ....*....|....*....|....*....|.
gi 2206973351  88 IIWMKT*FFFMIILLLGIYHEWNQNMLMWTN 118
Cdd:MTH00042   86 STLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-114 2.77e-19

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 75.92  E-value: 2.77e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  20 MILSIMMSKKSFmDREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIYLFKtTNFIIWMKT*FFFMI 99
Cdd:pfam00507   1 LLLSRLLGPKRP-NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*
gi 2206973351 100 ILLLGIYHEWNQNML 114
Cdd:pfam00507  79 ILLVGLVYAWKKGAL 93
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 14-116 6.66e-19

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 75.32  E-value: 6.66e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  14 FISNIIMILSIMMSKKSFMDREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIYLFKTTNFIIWMKt 93
Cdd:MTH00203   12 LLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSLSLLLA- 90

                          90       100
                  ....*....|....*....|...
gi 2206973351  94 *FFFMIILLLGIYHEWNQNMLMW 116
Cdd:MTH00203   91 -FLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 18-116 3.60e-18

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 73.49  E-value: 3.60e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  18 IIMILSIMMSKKSFM------DREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPI---IYLFKTTNFI 88
Cdd:MTH00069    8 ISTILSLILITISFWlplnnpDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwaSQLNTPTNTL 87

                          90       100
                  ....*....|....*....|....*...
gi 2206973351  89 IWmkt*FFFMIILLLGIYHEWNQNMLMW 116
Cdd:MTH00069   88 FW---STLILILLTLGLIYEWIQGGLEW 112
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 15-117 1.21e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 72.22  E-value: 1.21e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  15 ISNIIMILSIMMSKKSfMDREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIYLFKTTNFIIWMKT* 94
Cdd:MTH00113   13 LSTILTTLNFWLTQTK-PDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLTTPTTTLTWA 91

                          90       100
                  ....*....|....*....|...
gi 2206973351  95 FFFMIILLLGIYHEWNQNMLMWT 117
Cdd:MTH00113   92 TIILTLLTLGLIYEWLQGGLEWA 114
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 13-116 9.50e-17

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 70.15  E-value: 9.50e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  13 IFISNIIMILSIMMSKKSfMDREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIYLFKTTNFIIWMk 92
Cdd:COG0838    16 LGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWFGLI- 93

                          90       100
                  ....*....|....*....|....
gi 2206973351  93 T*FFFMIILLLGIYHEWNQNMLMW 116
Cdd:COG0838    94 EMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 12-116 4.06e-14

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 63.19  E-value: 4.06e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  12 TIFISNIIMILSIMMSKKSfMDREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIYLFKTTN-FIIW 90
Cdd:MTH00055   15 SIGLSTVISGASYIVGVKQ-PDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGlFGFW 93

                          90       100
                  ....*....|....*....|....*.
gi 2206973351  91 mkT*FFFMIILLLGIYHEWNQNMLMW 116
Cdd:MTH00055   94 --VMYLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 12-116 9.74e-14

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 62.39  E-value: 9.74e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  12 TIFISNIIMILSIMMSKKSfMDREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIYLFKTTN-FIIW 90
Cdd:MTH00018   10 SVVLSALFSGASYFLGVKQ-PDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIApFGFW 88

                          90       100
                  ....*....|....*....|....*.
gi 2206973351  91 mkT*FFFMIILLLGIYHEWNQNMLMW 116
Cdd:MTH00018   89 --TMVGFLFILTLGLIYEWIKGGLEW 112
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 33-117 1.04e-12

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 59.88  E-value: 1.04e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  33 DREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIYLFKTTNFIIWMkT*FFFMIILLLGIYHEWNQN 112
Cdd:PRK06602   38 DREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGWLGFV-EAMIFILVLLVGLVYLWRKG 116


                  ....*
gi 2206973351 113 MLMWT 117
Cdd:PRK06602  117 ALDWE 121
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 33-116 3.84e-11

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 55.71  E-value: 3.84e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  33 DREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIYLFKTTN-FIIWMkt*FFFMIILLLGIYHEWNQ 111
Cdd:MTH00030   40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNlFSFWI--VYTFLIVLAIGLAYEWIK 117


                  ....*
gi 2206973351 112 NMLMW 116
Cdd:MTH00030  118 GGLEW 122
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
33-116 1.33e-05

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 41.27  E-value: 1.33e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  33 DREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIYLFKTTNFIIWMKt*FFFMIILLLGIYHEWNQN 112
Cdd:PRK07756   39 SAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGLFALIE-MLIFVVMLLVGLAYAWKKK 117


                  ....
gi 2206973351 113 MLMW 116
Cdd:PRK07756  118 VLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
18-116 1.59e-04

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 38.49  E-value: 1.59e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  18 IIMILSIMMSKKSFMDRE--KCSPFECGFNP-KSLARIpfSLHFFLITIIFLIFDVEIALIFPIIYLFKTTNfIIWMKT* 94
Cdd:PRK08489   27 TTRLARFISRKLAQKNTEklKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFPWAVDFKLLG-LFGLIEM 103

                          90       100
                  ....*....|....*....|..
gi 2206973351  95 FFFMIILLLGIYHEWNQNMLMW 116
Cdd:PRK08489  104 LLFIVLLTIGFIYAWKKGALEW 125
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 33-116 2.04e-04

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 38.25  E-value: 2.04e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  33 DREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIYLFKTTNFIIWMKT*FFFMIILLLGIYHEWNQN 112
Cdd:PRK06432   60 DQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIPFIET-LIFLAMPLFAVYYAFKMG 138


                  ....
gi 2206973351 113 MLMW 116
Cdd:PRK06432  139 YMRW 142
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 12-118 1.19e-03

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 35.64  E-value: 1.19e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  12 TIFISNIIMILSIMMSKKSFmDREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIalifpIIYLFKTTNFIIWM 91
Cdd:MTH00092   11 TLLLLMLLYLLNFFLSVKKF-DLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEI-----VMFLGLLVSDFSSL 84

                          90       100
                  ....*....|....*....|....*..
gi 2206973351  92 KT*FFFMIILLLGIYHEWNQNMLMWTN 118
Cdd:MTH00092   85 ISFFMLMIFIFFGFYMEWWYGKLIWVI 111
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 13-118 8.79e-03

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 33.33  E-value: 8.79e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973351  13 IFISNIIMILSIMMSKKSFMDREKCSPFECGFNPKSLARIPFSLHFFLITIIFLIFDVEIALIFPIIYLfkttnfIIWMK 92
Cdd:MTH00060   14 LFLVIYFFHSGLWNNKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPFQ------GLLFY 87

                          90       100
                  ....*....|....*....|....*....
gi 2206973351  93 T*---FFFMIILLLGIYHEWNQNMLMWTN 118
Cdd:MTH00060   88 NFwyyYFFLLLLFLGFVVELFSGYVRWVY 116
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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