|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
7-578 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 596.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 7 SIC*FFFFFLFVYMMMNFFMMIYFIMNNLIYFLEWEIITLNSSSLVMSILLDWMSLLFMMFVCLISSMVIYYSKSYMQSE 86
Cdd:MTH00165 2 SMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 87 LNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYYQNLKSYNAGMLTALINRVGDVFILMVISWMLNY 166
Cdd:MTH00165 82 KNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNF 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 167 GSWNYIFYLGYMNNDKIMQIMGIMIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLMN*F 246
Cdd:MTH00165 162 GSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSF 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 247 FMKILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQLGLMMSILSMGFPDLAFFHMLTHAMFKAMLFMCAGVIIHMMND 326
Cdd:MTH00165 242 FSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSN 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 327 MQDIRWMGGISLYIPMTSLCLNISNLALCGIPFLSGFYSKDLILEMMSITNMNLLMFFLYYVSMGLTMFYTIRLILYIMI 406
Cdd:MTH00165 322 SQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMS 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 407 MDFNLISIYNLYDEDYIMLKGMMILLLMSVISGSLLNWLIFSYPYMIYLPFNMKMMVIYVIMVGGFMGFMISDMNIFFIN 486
Cdd:MTH00165 402 GDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNL 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 487 KYLMVYKMSSFLCLMWFMPNLSTYGVIYYFLNLGQKLMKNVDFGWSEFYSGQGLMSILKNYSIFYNIFYMNNLKIYLFSF 566
Cdd:MTH00165 482 KSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSF 561
|
570
....*....|..
gi 2206973352 567 IMWIFFLLMILL 578
Cdd:MTH00165 562 LLWMIILLLLFL 573
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
18-577 |
5.50e-169 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 491.67 E-value: 5.50e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 18 VYMMMNFFMMIYFIMNNLIYFLEWEIITLNSSSLVMSILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVL 97
Cdd:MTH00151 13 SYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVM 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 98 LFVFSMILLIISPNMISILLGWDGLGLISYCLVIYYQNLKSYNAGMLTALINRVGDVFILMVISWMLNYGSWNYIfylgY 177
Cdd:MTH00151 93 LFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSIL----S 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 178 MNNDKIMQIMGIMIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF-NILLMN*FFMKILLLLSM 256
Cdd:MTH00151 169 MWDFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFfPFLSSSSGFSSFLLFISL 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 257 LTMFMAGISANYEFDLKKIIALSTLSQLGLMMSILSMGFPDLAFFHMLTHAMFKAMLFMCAGVIIHMMNDMQDIRWMGGI 336
Cdd:MTH00151 249 LTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSL 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 337 SLYIPMTSLCLNISNLALCGIPFLSGFYSKDLILEMMSITNMNLLMFFLYYVSMGLTMFYTIRLILYIMIMDFNLISIYN 416
Cdd:MTH00151 329 FLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSS 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 417 LYDEDYIMLKGMMILLLMSVISGSLLNWLIFSYPYMIYLPFNMKMMVIYVIMVGGFMGFMISDMNIFFINKylmvYKMSS 496
Cdd:MTH00151 409 KSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKM----VKLSF 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 497 FLCLMWFMPNLSTYGVIYYFLNLGQKLMKNVDFGWSEFYSGQGLMSILKNYSIFYNIFYMNNLKIYLFSFIMWIFFLLMI 576
Cdd:MTH00151 485 FFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLVLFLVVI 564
|
.
gi 2206973352 577 L 577
Cdd:MTH00151 565 S 565
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
18-578 |
2.63e-149 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 441.90 E-value: 2.63e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 18 VYMMMNFFMMIYFIMNNLIYFLEWEIITLNSSSLVMSILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVL 97
Cdd:MTH00207 16 FMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 98 LFVFSMILLIISPNMISILLGWDGLGLISYCLVIYYQNLKSYNAGMLTALINRVGDVFILMVISWMLNYGSWNYIfylgY 177
Cdd:MTH00207 96 LFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWSIT----N 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 178 MNNDKIMQIMGIMIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF-NILLMN*FFMKILLLLSM 256
Cdd:MTH00207 172 MWQTDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFyPFLSSTYWFNPALLLTAS 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 257 LTMFMAGISANYEFDLKKIIALSTLSQLGLMMSILSMGFPDLAFFHMLTHAMFKAMLFMCAGVIIHMMNDMQDIRWMGGI 336
Cdd:MTH00207 252 LTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNL 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 337 SLYIPMTSLCLNISNLALCGIPFLSGFYSKDLILEMMSITNMNLLMFFLYYVSMGLTMFYTIRLILYIMIMDFNLISIYN 416
Cdd:MTH00207 332 TNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHH 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 417 LYDEDYIMLKGMMILLLMSVISGSLLNWLIFSYPYMIYLPFNMKMMVIYVIMVGGFMGFMISDMNIFFINKYLMVYKMSS 496
Cdd:MTH00207 412 LEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLLINNPLSHF 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 497 FLCLMWFMPNLSTYGVIYYFLNLGQKLMKNVDFGWSEFYSGQGlmsILKNYSIFYNIfYMNNLKIYLFSFIMWIFFLLMI 576
Cdd:MTH00207 492 ASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQG---TFKMFSRSSNN-VMKLQKNIPNNYLMMSFVLLTI 567
|
..
gi 2206973352 577 LL 578
Cdd:MTH00207 568 II 569
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
23-577 |
1.74e-145 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 431.76 E-value: 1.74e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 23 NFFMMIYFIMNNLIYFLEWEIITLNSSSLVMSILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVLLFVFS 102
Cdd:MTH00209 16 SFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILS 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 103 MILLIISPNMISILLGWDGLGLISYCLVIYYQNLKSYNAGMLTALINRVGDVFILMVISWMLNYGSWNyIFYLGYMNNdk 182
Cdd:MTH00209 96 MNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWN-IFYLNFNSN-- 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 183 IMQIMGIMIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF-NILLMN*FFMKILLLLSMLTMFM 261
Cdd:MTH00209 173 LGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFfPSLFSSPFFSMSLLLLGSLTTLM 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 262 AGISANYEFDLKKIIALSTLSQLGLMMSILSMGFPDLAFFHMLTHAMFKAMLFMCAGVIIHMMNDMQDIRWMGGISLYIP 341
Cdd:MTH00209 253 ASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMP 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 342 MTSLCLNISNLALCGIPFLSGFYSKDLILEMMSITNMNLLMFFLYYVSMGLTMFYTIRLILYIMIMDFNLISIYNLYDED 421
Cdd:MTH00209 333 ITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQN 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 422 YIMLKGMMILLLMSVISGSLLNWLIFSYPYMIYLPFNMKMMVIYVIMVGGFMGFMISDMNIFFINKylmvYKMSSFLCLM 501
Cdd:MTH00209 413 KLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIKG----YKVNYFLSQM 488
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2206973352 502 WFMPNLSTYGVIYYFLNLGQKLMKNVDFGWSEFYSGQGLMSILKNYSIFYNIFYMNNLKIYLFSFIMWIFFLLMIL 577
Cdd:MTH00209 489 WFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLGVILFM 564
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
18-578 |
3.80e-108 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 336.54 E-value: 3.80e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 18 VYMMMNFFMMIYFIM-----NNLIYFLEWEIITLNSSSLVMSILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRF 92
Cdd:MTH00211 33 KAVKLSFFISLIPLLifldqGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRF 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 93 IILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYYQNLKSYNAGMLTALI-NRVGDVFILMVISWML-NYGSWN 170
Cdd:MTH00211 113 FKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIyNRIGDIGLLLSMVWLLlNLNSWE 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 171 YifyLGYMNNDKIMQIMGIMIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN-ILLMN*FFMK 249
Cdd:MTH00211 193 I---SQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSpLFQNNQLILG 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 250 ILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQLGLMMSILSMGFPDLAFFHMLTHAMFKAMLFMCAGVIIHMMNDMQD 329
Cdd:MTH00211 270 AVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQD 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 330 IRWMGGISLYIPMTSLCLNISNLALCGIPFLSGFYSKDLILEMMSITNMNLLMFFLYYVSMGLTMFYTIRLILYIMIMDF 409
Cdd:MTH00211 350 IRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYP 429
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 410 NLISIYNLYDEDYIMLKGMMILLLMSVISGSLLNWLIFSYPYMI-YLPFNMKMMVIYVIMVGGFMGFMISdmnifFINKY 488
Cdd:MTH00211 430 RFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEIlSLPFLLKLMPLLVTIVGLLLGLELV-----NLTHK 504
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 489 LMVYKMSSFLCLMWFMPNLSTYGVIYYFLNLGQKL-MKNVDFGWSEFYSGQGLMSILKNYSIFYNIFYMNNLKIYLFSFI 567
Cdd:MTH00211 505 QLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLsTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLL 584
|
570
....*....|.
gi 2206973352 568 MWIFFLLMILL 578
Cdd:MTH00211 585 LSLLLILLLFL 595
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
2-580 |
1.99e-91 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 293.80 E-value: 1.99e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 2 NYKNNSIC*FFFFFLFVYMMMNFFMMIYF-IMNNLIYFLEWEIITLNSSSLvmSILLDWMSLLFMMFVCLISSMVIYYSK 80
Cdd:MTH00208 51 NYNNSNFSISLLKTLAFLSLINLLIWILLgCPNINISLSNWLSNTLFNFSL--SFIFDFYFILFFSVALFVTWSIIEFSH 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 81 SYMQSELNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYYQNLKSYNAGMLTALI-NRVGDVFILMV 159
Cdd:MTH00208 129 YYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIyNRIGDIGIILF 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 160 ISW-MLNYGSWNY--IFYLGyMNNDKIMQIMGIMIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLI 236
Cdd:MTH00208 209 LSLsLINFNSWNLneILSLN-NSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLI 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 237 RFNILLMN*-FFMKILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQLGLMMSILSMGFPDLAFFHMLTHAMFKAMLFM 315
Cdd:MTH00208 288 RTSPLISNSpWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFL 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 316 CAGVIIHMMNDMQDIRWMGGISLYIPMTSLCLNISNLALCGIPFLSGFYSKDLILEMMSITNMNLLMFFLYYVSMGLTMF 395
Cdd:MTH00208 368 CSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAV 447
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 396 YTIRLILYIMIMDFNLISIYNLYDEDYIMLKGMMILLLMSVISGSLLNWLIFSYPyMIYLPFNMKMMVIYVIMVGGFMGF 475
Cdd:MTH00208 448 YSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAAFSF 526
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 476 MIsdmnIFFINKYLMVYKMSSFLCLMWFMPNLSTYGVIYYFLNLGQKL-MKNVDFGWSEFYSGQGLMSILKNYSIFYNIF 554
Cdd:MTH00208 527 SF----LLSLSSNPINSNFFSFLSNQWFFVNISHSIIISFSFFTSLFGsTRTLDRGWSENIGPQGIGNTSSTLSKSYQLT 602
|
570 580
....*....|....*....|....*.
gi 2206973352 555 YMNNLKIYLFSFIMWIFFLLMILLSI 580
Cdd:MTH00208 603 QTGYIKQYLLSSTLLFLLILTLSLII 628
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
20-577 |
5.41e-91 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 292.07 E-value: 5.41e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 20 MMMNFFM----MIYFIMNNLIYFL-EWEIITLNSSSLVMSILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFII 94
Cdd:MTH00004 40 VKLAFLIslipLTLFLNSGTESITtNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFK 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 95 LVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYYQNLKSYNAGMLTALI-NRVGDVFILMVISWM-LNYGSWNYi 172
Cdd:MTH00004 120 YLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIyNRIGDIGLILSMAWLaMTLNTWEI- 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 173 fyLGYMNNDKIMQIMGIMIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN-ILLMN*FFMKIL 251
Cdd:MTH00004 199 --QQLFSPTQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHpLLQNNQTALTIC 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 252 LLLSMLTMFMAGISANYEFDLKKIIALSTLSQLGLMMSILSMGFPDLAFFHMLTHAMFKAMLFMCAGVIIHMMNDMQDIR 331
Cdd:MTH00004 277 LCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIR 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 332 WMGGISLYIPMTSLCLNISNLALCGIPFLSGFYSKDLILEMMSITNMNLLMFFLYYVSMGLTMFYTIRLILYIMIMDFNL 411
Cdd:MTH00004 357 KMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRT 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 412 ISIYNLYDEDYIMLKGMMILLLMSVISGSLLNWLIF-SYPYMIYLPFNMKMMVIYVIMVGGFMGFMISDMNIFFI-NKYL 489
Cdd:MTH00004 437 PPTTPINENTPTIINPITRLALGSILAGLLISSTILpTKTPPMTMPTTTKLAALIVTILGILLALELSNMTTTLTpPKQN 516
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 490 MVYKMSSFLCLMWFMPNLSTygvIYYFLNLGQKLMKN-VDFGWSEFYSGQGLMSILKNYSIFYNIFYMNNLKIYLFSFIM 568
Cdd:MTH00004 517 TLHNFSNQLAFFNPLTHRLL---PMTLLKSSQKIATHlIDLSWLEKMGPKGLANLQLTASKTLTTLQKGLIKNYLTSFAL 593
|
....*....
gi 2206973352 569 WIFFLLMIL 577
Cdd:MTH00004 594 TILLLLLLT 602
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
24-449 |
3.23e-90 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 290.13 E-value: 3.23e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 24 FFMMIYFIMNNLIYFLEWEIITLNSSSLVMSILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVLLFVFSM 103
Cdd:COG1009 45 SLLLFPAVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAM 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 104 ILLIISPNMISILLGWDGLGLISYCLVIYYQNLKSYNAGMLTALI-NRVGDVFILMVISWMLNY-GSWNY--IFYLGYMN 179
Cdd:COG1009 125 LGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLvTRVGDLGLLLGILLLGAIaGTLNFseLLAAAPTI 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 180 NDKIMQIMGIMIIL-AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN-ILLMN*FFMKILLLLSML 257
Cdd:COG1009 205 LSSPLLTLILLLLLlGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSpLFALSPVWLTVVAIIGAI 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 258 TMFMAGISANYEFDLKKIIALSTLSQLGLMMSILSMGFPDLAFFHMLTHAMFKAMLFMCAGVIIHMMNDmQDIRWMGGIS 337
Cdd:COG1009 285 TALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATGT-RDIRKMGGLR 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 338 LYIPMTSLCLNISNLALCGIPFLSGFYSKDLILE-MMSITNMNLLMFFLYYVSMGLTMFYTIRLILYIMIMDFNLISIYN 416
Cdd:COG1009 364 KKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKH 443
|
410 420 430
....*....|....*....|....*....|...
gi 2206973352 417 LYDEDYIMLKGMMILLLMSVISGSLLNWLIFSY 449
Cdd:COG1009 444 PHESPWLMTLPLVVLAVLSLVLGLLLPGLLEGL 476
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
41-577 |
1.43e-84 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 275.25 E-value: 1.43e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 41 WEIITLNSSSLVMSILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVLLFVFSMILLIISPNMISILLGWD 120
Cdd:MTH00066 64 FHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWE 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 121 GLGLISYCLVIYYQNLKSYNAGMLTALI-NRVGDVFILMVISW-MLNYGSWNYIFYLGYMNNDkimQIMGIMIILAAMTK 198
Cdd:MTH00066 144 GVGIMSFLLIGWWHARADANTAALQAVLyNRVGDIGLILSMAWlAMNTNSWELQQIFLLNDNS---TLPLLGLILAAAGK 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 199 SAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILL-MN*FFMKILLLLSMLTMFMAGISANYEFDLKKIIA 277
Cdd:MTH00066 221 SAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLeNNQTALTICLCLGALTTLFTAACALTQNDIKKIVA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 278 LSTLSQLGLMMSILSMGFPDLAFFHMLTHAMFKAMLFMCAGVIIHMMNDMQDIRWMGGISLYIPMTSLCLNISNLALCGI 357
Cdd:MTH00066 301 FSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGT 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 358 PFLSGFYSKDLILEMMSITNMNLLMFFLYYVSMGLTMFYTIRLILYIMIMDFNLISIYNLYDEDYIMLKGMMILLLMSVI 437
Cdd:MTH00066 381 PFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSII 460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 438 SGSLLNWLIF-SYPYMIYLPFNMKMMVIYVIMVGGFMGFMISDMNiffiNKYLMVYKMSSFLCLMWFMPNLSTYGVIYYF 516
Cdd:MTH00066 461 AGLLIIFNILpMKPQILTMPTFMKLAALLVTLLGLLIALDLAKIT----SKTTPKTKMHSFSNLLAFFPTIIHRLSPKTN 536
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2206973352 517 LNLGQKLMKN-VDFGWSEFYSGQGLMSI-LKNYSIFYNIfYMNNLKIYLFSFIMWIFFLLMIL 577
Cdd:MTH00066 537 LNSGQNIATHlTDMTWYEKSGPKGLTNQqLPPIKTITNI-QTGLIKTYLTLFLITLLLMLILL 598
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
26-577 |
2.80e-78 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 258.63 E-value: 2.80e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 26 MMIYFIMNNLIYFLEWEIITLNSSSLVMSILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVLLFVFSMIL 105
Cdd:MTH00108 51 TMMFIHSGQEMIISNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLI 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 106 LIISPNMISILLGWDGLGLISYCLVIYYQNLKSYNAGMLTA-LINRVGDV-FILMVISWMLNYGSWNY--IFylgyMNND 181
Cdd:MTH00108 131 LVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAiLYNRIGDIgFILAMAWFLLNLNSWDLqqIF----MLNP 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 182 KIMQIMGIMIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLMN*FFMK--ILLLLSMLTM 259
Cdd:MTH00108 207 NNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQtlTLCLGAITTL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 260 FMAgISANYEFDLKKIIALSTLSQLGLMMSILSMGFPDLAFFHMLTHAMFKAMLFMCAGVIIHMMNDMQDIRWMGGISLY 339
Cdd:MTH00108 287 FTA-ICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKT 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 340 IPMTSLCLNISNLALCGIPFLSGFYSKDLILEMMSITNMNLLMFFLYYVSMGLTMFYTIRLILYIMIMDFNLISIYNLYD 419
Cdd:MTH00108 366 LPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINE 445
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 420 EDYIMLKGMMILLLMSVISGSLL--NWLIFSYPYMIyLPFNMKMMVIYVIMVGGFMGFMISDMNIFFINKYLMvyKMSSF 497
Cdd:MTH00108 446 NNPLLINPIKRLLLGSIFAGFLIsnNIPPTTIPQMT-MPLYLKLTALAVTILGFILALELNLLTNNLKFKYPS--NTFKF 522
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 498 LCLMWFMPNLSTYGVIYYFLNLGQKLMKN-VDFGWSEFYSGQGLMSILKNYSIfynifYMNN----LKIYLFSFIMWIFF 572
Cdd:MTH00108 523 SNMLGYFPTIMHRLPPYMNLTMSQKLASMlLDLIWLEKILPKTISLIQMKAST-----TISNqkglIKLYFLSFLITLTL 597
|
....*
gi 2206973352 573 LLMIL 577
Cdd:MTH00108 598 SLLLF 602
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
41-441 |
2.99e-78 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 258.75 E-value: 2.99e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 41 WEIITLNSSSLVMSILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVLLFVFSMILLIISPNMISILLGWD 120
Cdd:TIGR01974 65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 121 GLGLISYCLV-IYYQNLKSYNAGMLTALINRVGDVFILMVISWMLNY-GSWNY--IFYLGYMNNDKIMQIMGIMIILAAM 196
Cdd:TIGR01974 145 GVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYfGTLNFqeVFALAPGAFFSALTLICLLLFIGAM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 197 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN-ILLMN*FFMKILLLLSMLTMFMAGISANYEFDLKKI 275
Cdd:TIGR01974 225 GKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSpLFELSPTALYLVTIIGAITALFAATVALVQNDIKRI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 276 IALSTLSQLGLMMSILSMGFPDLAFFHMLTHAMFKAMLFMCAGVIIHMMNDMQDIRWMGGISLYIPMTSLCLNISNLALC 355
Cdd:TIGR01974 305 LAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALI 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 356 GIPFLSGFYSKDLILEMMSITNMNLLMFFLYYVSMGLTMFYTIRLILYIMIMDFNLISIYNLYDEDYIMLKGMMILLLMS 435
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGS 464
|
....*.
gi 2206973352 436 VISGSL 441
Cdd:TIGR01974 465 VFAGFF 470
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
41-402 |
8.15e-77 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 255.47 E-value: 8.15e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 41 WEIITLNSSSLVMSILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVLLFVFSMILLIISPNMISILLGWD 120
Cdd:PRK06590 66 WTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 121 GLGLISYCLVIYYQNLKSYNAGMLTALI-NRVGDVFILMVISWMLNY-GSWNY--IFYLGYMNNDKIMQIMGIMIIL--- 193
Cdd:PRK06590 146 GVGLCSYLLIGFWYKKPSAGAAAMKAFIvNRVGDVGLALGIFLLFAEfGSLNYdeVFAAAPQFFGLGWSALTLICLLlfi 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 194 AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN-ILLMN*FFMKILLLLSMLTMFMAGISANYEFDL 272
Cdd:PRK06590 226 GAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSpLFELSPEALLFVAIVGAVTALFAAFIGLVQTDI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 273 KKIIALSTLSQLGLMMSILSMGFPDLAFFHMLTHAMFKAMLFMCAGVIIHMMNDMQDIRWMGGISLYIPMTSLCLNISNL 352
Cdd:PRK06590 306 KRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTL 385
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 2206973352 353 ALCGIPFLSGFYSKDLILEmMSITNMNLLMFFLYYVSMGLTMFYTIRLIL 402
Cdd:PRK06590 386 ALIGIPPFAGFFSKDEILE-AAFANGHINLFVAGLVGAFLTAFYSFRLIF 434
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
82-404 |
1.30e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 246.67 E-value: 1.30e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 82 YMQSELNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYYQNLKSYNAGMLTALI-NRVGDVFILMVI 160
Cdd:MTH00137 111 YMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIyNRVGDIGLILAM 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 161 SWML-NYGSWNY--IFYLgymNNDKIMQIMGIMIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR 237
Cdd:MTH00137 191 AWMAtNLNSWEIqqIFAL---SKDFDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIR 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 238 FNILLM-N*FFMKILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQLGLMMSILSMGFPDLAFFHMLTHAMFKAMLFMC 316
Cdd:MTH00137 268 LSPLMEnNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLC 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 317 AGVIIHMMNDMQDIRWMGGISLYIPMTSLCLNISNLALCGIPFLSGFYSKDLILEMMSITNMNLLMFFLYYVSMGLTMFY 396
Cdd:MTH00137 348 SGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVY 427
|
....*...
gi 2206973352 397 TIRLILYI 404
Cdd:MTH00137 428 SLRVVFFV 435
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
46-502 |
9.91e-68 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 230.73 E-value: 9.91e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 46 LNSSSLVMSILLDWMSLLFMMF--VCLISSMVIYYSKSYMQSELNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLG 123
Cdd:MTH00020 65 LDSDLLTVYFGLQFDGLVAIMLlvVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVG 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 124 LISYCLV-IYYQNLKSYNAGMLTALINRVGDV-FILMVISWMLNYGSWNY--IFYLGYMNNDKIMQIMGIMIILAAMTKS 199
Cdd:MTH00020 145 LCSYLLInFWLTRIEANKAAIKAMLVNRVGDIgLLLAMFLLWDRFGSLDFssVFNMVVSAPSSDITLICLFLFIGAVGKS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 200 AQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLMN*FFMKILL-LLSMLTMFMAGISANYEFDLKKIIAL 278
Cdd:MTH00020 225 AQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtIVGSLTVFFAATVGLVQNDLKKVIAY 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 279 STLSQLGLMMSILSMGFPDLAFFHMLTHAMFKAMLFMCAGVIIHMMNDMQDIRWMGGISLYIPMTSLCLNISNLALCGIP 358
Cdd:MTH00020 305 STCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFP 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 359 FLSGFYSKDLILEMMSITNMNLLMFFLYYVSMGLTMFYTIRLILYIMIMDFNL--ISIYNLYDEDYIMLKGMMILLLMSV 436
Cdd:MTH00020 385 YLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLkkAVFFHLHEGDWNLLLPLGILALGSI 464
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 437 ISGSLLNWLIFSYPYMIY--LPFNMKMMVIYVIMVGGFMGFMISDMNIFFINKYLMVYKMSS--FLCLMW 502
Cdd:MTH00020 465 FVGYLAKEMIWSFQITLPpiVPLSIKLLPVFLSLGGIGLVIILYFYSSKTFRVPFSFIGRNSytFLGSAW 534
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
18-492 |
1.78e-64 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 220.17 E-value: 1.78e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 18 VYMMMNFFMMIYFIMNNLIYFLEWEIITLnssslvmSILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVL 97
Cdd:MTH00095 11 FFFFLLLFILFLPFMKLNLFFLEWDFLSL-------KFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 98 LFVFSMILLIISPNMISILLGWDGLGLISYCLVIYYQNLKSYNAGMLTALINRVGDVFILMVISWMLNYGswnyifyLGY 177
Cdd:MTH00095 84 IFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSS-------YYF 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 178 MNNDKIMQIMGIMIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLMN*FFMKILLLLSML 257
Cdd:MTH00095 157 FSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLIGLF 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 258 TMFMAGISANYEFDLKKIIALSTLSQLGLMMSILSMGFPDLAFFHMLTHAMFKAMLFMCAGVIIHMMNDMQDIRWMGGIS 337
Cdd:MTH00095 237 TMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNG 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 338 LYIPMTSLCLNISNLALCGIPFLSGFYSKDLILEMMSITNMNLLMFFLYYVSMGLTMFYTIRLilyIMIMDFNLISIYNL 417
Cdd:MTH00095 317 NLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRL---WKSFFLSFSKVVNV 393
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2206973352 418 YDEDYIMLKGMMILLLMSVISGSLLNWLIFSYPYMiYLPFNMKMMVIYVIMVGGFMGFMISDMNIFFINKYLMVY 492
Cdd:MTH00095 394 YSSSVLMNFLSLMLVFFSVFFLWWLNFNLLNLPSL-FLYLDFYVPLFYLFMIMLFSFFFFKLLFKELKYKFFVDY 467
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
65-504 |
1.25e-62 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 217.18 E-value: 1.25e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 65 MMFVCL-ISSMVIYYSKSYMQSELNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLV-IYYQNLKSYNAG 142
Cdd:MTH00210 85 MLIVITsVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWLTRIKANKAA 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 143 MLTALINRVGDVFILMVISWMLN-YGSWNY-IFY--LGYMNNDKIMQIMGIMIILAAMTKSAQIPFSSWLPAAMAAPTPV 218
Cdd:MTH00210 165 IKAMLINRVGDIGLVLAMIMILKeFGTLEFsTISslLVTNINKESLTIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPV 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 219 SALVHSSTLVTAGVYLLIRFNILLMN*FFMKILL-LLSMLTMFMAGISANYEFDLKKIIALSTLSQLGLMMSILSMGFPD 297
Cdd:MTH00210 245 SALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVtILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYS 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 298 LAFFHMLTHAMFKAMLFMCAGVIIHMMNDMQDIRWMGGISLYIPMTSLCLNISNLALCGIPFLSGFYSKDLILEMMSITN 377
Cdd:MTH00210 325 TSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKY 404
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 378 MNLLMFFLYYVSMGLTMFYTIRLILYIMIMDFNL--ISIYNLYDEDYIMLKGMMILLLMSVISGSLLNWLIFSYPYMIYL 455
Cdd:MTH00210 405 YIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSkkEVFIGVHESSWNITFPLLLLAFGSIFVGYLGKEVVLSNVIPPIV 484
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 2206973352 456 PFNMKMMVIYVIMVGGFMGFMISDMNIFFINKYLMVYKMSSFLCLMWFM 504
Cdd:MTH00210 485 PNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISRRGVSIRLYHVIYTFL 533
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
50-400 |
2.70e-56 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 201.02 E-value: 2.70e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 50 SLVMSILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCL 129
Cdd:PRK07376 82 HLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLL 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 130 V-IYYQNLKSYNAGMLTALINRVGDVFILMVIsWMLNYGSWNYIFYLGYMNNDKIMQIMGIMIILAA----------MTK 198
Cdd:PRK07376 162 VgFWYDRKGAADAAQKAFVVNRVGDFGLLLGI-LGLFWATGSFDFDGIADRLSELVSSGAVSGWLALllcilvflgpMAK 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 199 SAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLMN*-FFMKILLLLSMLTMFMAGISANYEFDLKKIIA 277
Cdd:PRK07376 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFpAVMTVIAWTGAITAFLGASIALTQNDIKKGLA 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 278 LSTLSQLGLMMSILSMGFPDLAFFHMLTHAMFKAMLFMCAGVIIHMMNDM--------QDIRWMGGISLYIPMTSLCLNI 349
Cdd:PRK07376 321 YSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVvghdpvlaQDMRLMGGLRKYMPITAITFLI 400
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 2206973352 350 SNLALCGIPFLSGFYSKDLILEmmSITNMNLLMFFLYYVSMGLTMFYTIRL 400
Cdd:PRK07376 401 GCLAISGIPPFAGFWSKDEILG--AAFEANPALWFVGFLTAGMTAFYMFRM 449
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
53-372 |
1.09e-50 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 185.55 E-value: 1.09e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 53 MSILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIY 132
Cdd:MTH00032 74 IGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAF 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 133 YQNLKSYNAGMLTALI-NRVGDV-FILMVISWMLNYGSWNY-----------IFYLGYMNNDKIM------QIMGIMIIL 193
Cdd:MTH00032 154 WTTRIQANKAAIKAIVvNRVGDVgVILGMVLIYKTIGSLDFltfnggsvgsgIMDRGYYGGGAYEsplapfAIIGILLLI 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 194 AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR-FNILLMN*FFMKILLLLSMLTMFMAGISANYEFDL 272
Cdd:MTH00032 234 GCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRsFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 273 KKIIALSTLSQLGLMMSILSM-GFPDLAFFHMLTHAMFKAMLFMCAGVIIHMMN-DMQDIRWMGGISLYIPMTSLCLNIS 350
Cdd:MTH00032 314 KKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIG 393
|
330 340
....*....|....*....|..
gi 2206973352 351 NLALCGIPFLSGFYSKDLILEM 372
Cdd:MTH00032 394 SFSIMGLPYLTGFYSKDLILEL 415
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
57-402 |
1.50e-47 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 178.70 E-value: 1.50e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 57 LDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIyyQNL 136
Cdd:PRK12650 77 ADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIA--RSG 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 137 KSYNAG-MLTALINRVGDVFIL-----MV-------ISWMLNYGSWNyifylgymNNDKIMQIMGIMIILAAMTKSAQIP 203
Cdd:PRK12650 155 SGGEAGsIRTLILTFFGGLTLLaavaiAAtqtgttsLSGILHSDVWA--------EKPGLTTVVAVLIAVAAFTKSAQFP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 204 FSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLMN*FFMKILLLLS-MLTMFMAGISANYEFDLKKIIALSTLS 282
Cdd:PRK12650 227 FHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVgMITALMGAVFAVQKTDLKKLTAYSTVS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 283 QLGLMMSILSMGFP---DLAFFHMLTHAMFKAMLFMCAGVIIHMMNDmQDIRWMGGISLYIPMTSLCLNISNLALCGIPF 359
Cdd:PRK12650 307 QLGWIVATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDHQAGT-RDIRRLGSLWRRMPFTFVSVTIAALSMAAVPP 385
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 2206973352 360 LSGFYSKDLILEMMSITNMNLLMFFLYYVSMGL----TMFYTIRLIL 402
Cdd:PRK12650 386 LFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALgavfTFAYSARLVL 432
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
109-385 |
2.21e-45 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 162.10 E-value: 2.21e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 109 SPNMISILLGWDGLGLISYCLVIYY-QNLKSYNAGMLTALINRVGDVFILMVISWMLNYGSWNYIFYL----GYMNNDKI 183
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskalTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 184 MQIMGIMIILAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFNILLM--N*FFMKILLLLSMLTMF 260
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLpsSPFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 261 MAGISANYEFDLKKIIALSTLSQLGLMMSILSMGFP---DLAFFHMLTHAMFKAMLFMCAGVIIHMMNDMQDIRWMGGIS 337
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 2206973352 338 LYIPMTSLCLNISNLALCGIPFLSGFYSKDLILEMMSITNMNLLMFFL 385
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAG 287
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
57-404 |
1.22e-42 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 158.39 E-value: 1.22e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 57 LDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYYQNL 136
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 137 KSYNAGMLTALINRVGDVFILMVISWM-LNYGSWNY--IFYLGYMNNDKIMQIMGIMIILAAMTKSAQIPFSSWLPAAMA 213
Cdd:COG0651 154 EALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMadLAARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 214 -APTPVSALVhSSTLVTAGVYLLIRFNILL----MN*FFMKILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQLGLMM 288
Cdd:COG0651 234 aAPSPVSALL-SGLLTKVGVYAILRVLTLLfgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYIL 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 289 SILSMGFPDL---AFFHMLTHAMFKAMLFMCAGVIIHMMNDmQDIRWMGGISLYIPMTSLCLNISNLALCGIPFLSGFYS 365
Cdd:COG0651 313 LGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERATGT-RDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVS 391
|
330 340 350
....*....|....*....|....*....|....*....
gi 2206973352 366 KDLILEMMSITNMNLLMFFLyYVSMGLTMFYTIRLILYI 404
Cdd:COG0651 392 KWLLLQAALEAGAWLLAAVL-LLSSLLTLAYFVRIFGRA 429
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
54-449 |
4.66e-42 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 161.94 E-value: 4.66e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 54 SILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYY 133
Cdd:TIGR00940 70 TLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 134 -QNLKSYNAGMLTALINRVGDVFILMVISWML----NYGSWNYIFYLGYMNNDKIMQIMGIMIILAAMTKSAQIPFSSWL 208
Cdd:TIGR00940 150 hHRAHSRYGAQKSLTITVFGGLAMLGGLILLGkitgSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 209 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFN-ILLMN*FFMKILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQLGLM 287
Cdd:TIGR00940 230 PDAMEAPTPVSAYLHSATMVKAGLYLLARFTpVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLI 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 288 MSILSMGFPDL----------------AFFHMLTHAMFKAMLFMCAGVIIHmMNDMQDIRWMGGISLYIPMTSLCLNISN 351
Cdd:TIGR00940 310 MVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDH-ETGTRDIRKLGGLFHIMPITFTLAMIAS 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 352 LALCGIPFLSGFYSKDLILE------MMSITNMNLLMFFLYYVSMGLTMFYTIRLILYIMIMDFNLISIYNL----YDED 421
Cdd:TIGR00940 389 AAMAGVPPFNGFLSKEMFFAeaitahLVNPFDTVTLGYLFPYVATVASVFTFVYSLRFIHGVFFGRPKPEDLprkpHEPP 468
|
410 420
....*....|....*....|....*...
gi 2206973352 422 YIMLKGMMILLLMSVISGSLLNWLIFSY 449
Cdd:TIGR00940 469 RWMLASPDILVLLVLVFGLFPAQLTGPI 496
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
24-483 |
6.44e-42 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 158.12 E-value: 6.44e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 24 FFMMIYFI-MNNLIYFLEWEIITLNSSSLVMSILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVLLFVFS 102
Cdd:MTH00063 9 LCLLIFFLfLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 103 MILLIISPNMISILLGWDGLGLISYCLVIYYQNLKSYNAGMLTALINRVGDVFILMVISWmlnygswNYIFYLGYMnndk 182
Cdd:MTH00063 89 MGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGL-------SCWGGSGSF---- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 183 imqIMGIMIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLMN*FFMKILLLLSMLTMFMA 262
Cdd:MTH00063 158 ---LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLLTIFIT 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 263 GISANYEFDLKKIIALSTLSQLGLMMSILSMGFPDLAFFHMLTHAMFKAMLFMCAGVIIHMMNDMQDIRWMGGISLYIPM 342
Cdd:MTH00063 235 GVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSILYGSW 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 343 TSLCLNISNLALCGIPFLSGFYSKDLILEMMSITNMNLLMFFLYYVSMGLTMFYTIRLILYI-MIMDFNLISIYNLYded 421
Cdd:MTH00063 315 NLFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCLILfGVKSSLSSGVRFLF--- 391
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2206973352 422 yiMLKGMMILLlmsvisGSLLNWLIFS-YPYMIYLPFNMKMMVIYVIMVGGFMGFMISDMNIF 483
Cdd:MTH00063 392 --FNSGLMVFL------WLFINYYVFLlLDEVVYLGVFISLVLLLVQLLGLLVGVLFYDSNLF 446
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-371 |
1.34e-41 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 160.08 E-value: 1.34e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 54 SILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYY 133
Cdd:PRK12647 59 SFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFN 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 134 QNLKSYNAGMLTALINRVGDVFILMVISWMLNYGSWNYIFYLGYMNND-----KIMQIMGIMIILAAMTKSAQIPFSSWL 208
Cdd:PRK12647 139 HEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLASGDvirehPLYLAILLLVLGGAFTKSAQFPFHFWL 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 209 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILL-MN*FFMKILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQLGLM 287
Cdd:PRK12647 219 PNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLgGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 288 MSILSMGFPDL---AFFHMLTHAMFKAMLFMCAGVIIHMMNdMQDIRWMGGISLYIPMTSLCLNISNLALCGIPFLSGFY 364
Cdd:PRK12647 299 VMLLGLGSELAikaAVLFLVAHSLYKGALFMVAGIIDHETG-TRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFL 377
|
....*..
gi 2206973352 365 SKDLILE 371
Cdd:PRK12647 378 AKELIYE 384
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-373 |
2.48e-41 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 160.36 E-value: 2.48e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 54 SILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYY 133
Cdd:PRK12648 71 SLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 134 QNLKSYNAGMLTALINRVGDVFILMVISWMLNY--GSWNY--IFYLGYM-NNDKIMQIMGIMIILAAMTKSAQIPFSSWL 208
Cdd:PRK12648 151 HHRADARRGARMALTVTGAGGLALLAGVLLLGHivGSYDLdvVLAAGDLiRAHPLYPPALVLILLGAFTKSAQFPFHFWL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 209 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILL--MN*FFMkILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQLGL 286
Cdd:PRK12648 231 PHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLagTEEWFW-IVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGL 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 287 MMSILSMGFPdLA----FFHMLTHAMFKAMLFMCAGVIIHMMNdMQDIRWMGGISLYIPMTSLCLNISNLALCGIPFLSG 362
Cdd:PRK12648 310 ITLLLGLGSP-LAavaaIFHIINHATFKASLFMAAGIIDHETG-TRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNG 387
|
330
....*....|.
gi 2206973352 363 FYSKdlilEMM 373
Cdd:PRK12648 388 FLSK----EMF 394
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
57-371 |
9.15e-41 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 157.99 E-value: 9.15e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 57 LDWMSLLFMMFVCLISSMVIYYSKSYMQSEL-NLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIY-YQ 134
Cdd:PRK12646 76 LDGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYwYN 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 135 NLKSYNAGMLTALINRVGDVFILMVISWMLNYGSWNYIFYL----GYMNNDKIMQIMGIMIILAAMTKSAQIPFSSWLPA 210
Cdd:PRK12646 156 NGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEIlgqaDHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPR 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 211 AMAAPTPVSALVHSSTLVTAGVYLLIRFNILL-MN*FFMKILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQLGLMMS 289
Cdd:PRK12646 236 AMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLgLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMA 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 290 ILSMG----------FPDL-------AFFHMLTHAMFKAMLFMCAGVIIHMMNdMQDIRWMGGISLYIPMTSLCLNISNL 352
Cdd:PRK12646 316 MVGIGggyaqhqqdaIASIyvfvlfaALFHLMNHAIFKCALFMGVGIIDHEAG-TRDIRILSGMRQLFPKMNLVMTIAAL 394
|
330
....*....|....*....
gi 2206973352 353 ALCGIPFLSGFYSKDLILE 371
Cdd:PRK12646 395 SMAGVPFLNGFLSKEMFLD 413
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
57-371 |
9.55e-38 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 149.30 E-value: 9.55e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 57 LDWMSLLFMMFVCLISSMVIYYSKSYMQS-ELNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYY-- 133
Cdd:PRK12644 72 LDALAALMSLLVLGVGALVLLYCARYFDDdEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYae 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 134 ---------QNLKSYNAGMLTALinrVGdVFILMVISwmlnyGSWNYIFYLGYMNNDKIMQIMGIMIILAAMTKSAQIPF 204
Cdd:PRK12644 152 raasrraalQALLVTTAGGLAML---VG-IIILGQAA-----GTYRLSELLADPPTGPAVSVAVVLILVGALSKSAIVPF 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 205 SSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR----FNILLmn*FFMKILLLLSMLTMFMAGISANYEFDLKKIIALST 280
Cdd:PRK12644 223 HFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARlapgFADVP---VWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGT 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 281 LSQLGLMMSILSMGFPD--LAFFHMLT-HAMFKAMLFMCAGVIIHMMNdMQDIRWMGGISLYIPMTSLCLNISNLALCGI 357
Cdd:PRK12644 300 VSQLGFLTVLVGIGTRDaaLAGLAMLLaHALFKAALFLVVGIIDHSTG-TRDIRKLSGLGRRQPVLAVVAALAAASMAGL 378
|
330
....*....|....
gi 2206973352 358 PFLSGFYSKDLILE 371
Cdd:PRK12644 379 PPLLGFVAKEAALE 392
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
396-577 |
3.02e-37 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 136.14 E-value: 3.02e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 396 YTIRLILYIMIMDFNLISIYNLYDEDYIMLKGMMILLLMSVISGSLLNWLIFSYPYMIYLPFNMKMMVIYVIMVGGFMGF 475
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 476 MISDMNIFFINKYLMvYKMSSFLCLMWFMPNLSTYGVIYYFLNLGQKLMKNVDFGWSEFYSGQGLMSILKNYSIFYNIFY 555
Cdd:pfam06455 81 ELSNLSNKQLKKSLN-FNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170 180
....*....|....*....|..
gi 2206973352 556 MNNLKIYLFSFIMWIFFLLMIL 577
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLLLLI 181
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
20-370 |
7.97e-37 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 145.80 E-value: 7.97e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 20 MMMNFFMMIYFIMNNLIYFLEWEIITLNSSSLVMSILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVLLF 99
Cdd:CHL00025 52 MIFSLNLSIQQINGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFF 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 100 VFSMILLIISPNMISILLGWDGLGLISYCLV-IYYQNLKSYNAGMLTALINRVGDVFILMVIS---WMLnyGSWNY---- 171
Cdd:CHL00025 132 NTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVGDFGLLLGILgfyWIT--GSFEFrdlf 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 172 -IFYLGYMNNDKIMQIMGIMIIL---AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR-FNILLMN*F 246
Cdd:CHL00025 210 eIFNNLIYNNEVNLLFATLCAFLlflGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlLPLFIVIPY 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 247 FMKILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQLGLMMSILSMGFPDLAFFHMLTHAMFKAMLFMCAGVIIHMM-- 324
Cdd:CHL00025 290 IMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMep 369
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 2206973352 325 ------NDMQDIRWMGGISLYIPMTSLCLNISNLALCGIPFLSGFYSKDLIL 370
Cdd:CHL00025 370 ivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL 421
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
57-380 |
1.56e-36 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 145.45 E-value: 1.56e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 57 LDWMSLLFMMFVCLISSMVIYYSKSYMQSEL-NLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYYQN 135
Cdd:PRK12645 76 VDGLSLLFALLITGIGSLVVLYSIYYLSKKKeQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYE 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 136 LKSYNAGMLTALINRV-------GDVFILMVISwmlnyGSWN---YIFYLGYMNNDKIMQIMGIMIILAAMTKSAQIPFS 205
Cdd:PRK12645 156 REASRYGAQKSMLITVfgglsmlGGFILLYIMT-----GSFSireMIANADEIQNSPLFIPAMILILLGAFTKSAQFPFY 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 206 SWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN-ILLMN*FFMKILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQL 284
Cdd:PRK12645 231 IWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTpIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 285 GLMMSILSMGFPDL----------------AFFHMLTHAMFKAMLFMCAGVIIHMMNdMQDIRWMGGISLYIPMTSLCLN 348
Cdd:PRK12645 311 GLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMIVGIVDHETG-TRDIRKLGGLMTIMPITFTIAL 389
|
330 340 350
....*....|....*....|....*....|...
gi 2206973352 349 ISNLALCGIPFLSGFYSKDLILE-MMSITNMNL 380
Cdd:PRK12645 390 IGALSMAGLPPFNGFLSKEMFFEsMLNATEANL 422
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
55-370 |
7.22e-34 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 134.72 E-value: 7.22e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 55 ILLDWMSLLFMMFVCLISSMVIYYSKSYM-------QSELNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISY 127
Cdd:PRK06525 71 LVIDPVSVLIGFVVVLLGLLVTLYSTGYMspgnrehPVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 128 CLVIYYQNLKSYNAGMLTALINRVGDVFILMVISWMLNYGSWNYIFYLGYMNNDkIMQIMGIMIILAAMTKSAQIPFSSW 207
Cdd:PRK06525 151 ALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGS-LKYLVFLGILFAAWGKSAQLPFYSW 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 208 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRFnILLMN*F---FMKILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQL 284
Cdd:PRK06525 230 LPDAMEAPTPASAYLHAASMVKVGVYIFARA-IQSMGPIphvIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQL 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 285 GLMMSILSMGF--PDLAF----FHMLTHAMFKAMLFMCAGVIIHMMNdMQDIRWMGGISLYIPMTSLCLNISNLALCGIP 358
Cdd:PRK06525 309 GYMFFGLSLAIlgSRLALegsiAYIFNHAFAKSLFFLVAGALSYSCG-TRLLPRLRGVLKKLPLVGVGFCVAALAITGVP 387
|
330
....*....|..
gi 2206973352 359 FLSGFYSKDLIL 370
Cdd:PRK06525 388 PFNGFFSKFPIF 399
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
46-401 |
7.96e-34 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 137.27 E-value: 7.96e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 46 LNSSSLVMSILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLI 125
Cdd:PRK12649 67 LPSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSIT 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 126 SYCLVIYYQNLKSYNAGMLTALINRVGDVFILMVISWMLNYGSWNYIF--------YLGYMNNDKIMQIMGIMIILAAMT 197
Cdd:PRK12649 147 SFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIatilqdseLIENIKGHPLFLITLILIFIGAAA 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 198 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLMN*FFMKILLL-LSMLTMFMAGISANYEFDLKKII 276
Cdd:PRK12649 227 KSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSgTGMITMVLAGFLAFRQTDIKAIL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 277 ALSTLSQLGLMMSIL---SMGFPDLAF----FHMLTHAMFKAMLFMCAGVIIHMMNdMQDIRWMGGISLYIPMTSLCLNI 349
Cdd:PRK12649 307 AYSTISQLAYLMTMYgytTYHEPGLGVaaatFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASI 385
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2206973352 350 SNLALCGIPFLSGFYSKDLI----LEMMSITNMNLLMFFLYYVSMG--LTMFYTIRLI 401
Cdd:PRK12649 386 AALAMAGIPPLNGFLSKEMFyetsVEMGALIGGPFTIIIPAVAVLGgvFTFAYSIKLI 443
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-405 |
8.23e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 116.90 E-value: 8.23e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 57 LDWMSLLFMMFVCLISSMVIYYSKSYmqSELNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYYQNL 136
Cdd:PRK08375 75 ADSLSALFLLVTSILAIAALLYAIGY--GEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 137 KSYNA-------GMLTALINRVGDVFILMVIswmlnyGSWNYIFYLGYMNNDKIMQIMGIMIILAAMTKSAQIPFSSWLP 209
Cdd:PRK08375 153 RALAAarkylivGLIGSTFLLIGVGLLYGVT------GTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 210 AAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLMN*FFMK------ILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQ 283
Cdd:PRK08375 227 RAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFalglgwLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQ 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 284 LGLMMSILSMGFPDL---AFFHMLTHAMFKAMLFMCAGVIIHMMNdMQDIRWMGGISLYIPMTSLCLNISNLALCGIPFL 360
Cdd:PRK08375 307 MGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPT 385
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2206973352 361 SGFYSKDLILEMMSITNMNLLMFFLYYVSMgLTMFYTIRLILYIM 405
Cdd:PRK08375 386 SGFVSKWYLVVGAVEAGQWLVLAVLLASSL-LALLYFLRIWYRAF 429
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
53-371 |
2.79e-26 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 113.67 E-value: 2.79e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 53 MSILLDWMSLLFMMFVCLISSMVIYYSKSY---MQSELNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCL 129
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 130 VIY-YQNLKSYNAGMLTALINRVGDVFI-LMVISWMLNYGSWNYIFyLGYmnNDKIMQIMGIMIILAAMTKSAQIPFSSW 207
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLmLGIIVLFIQTGSFELSP-LGA--SAGILSLVFLLLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 208 LPAAM-AAPTPVSALVhSSTLVTAGVYLLIRF--NILLMN*FFMKILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQL 284
Cdd:PRK08667 228 LPYAHpASPSNVSALM-SGVMLKVAVYGLVRFlmDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENI 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 285 GLMMSILSM-------GFPDLAF-------FHMLTHAMFKAMLFMCAGVIIHMMNDmQDIRWMGGISLYIPMTSLCLNIS 350
Cdd:PRK08667 307 GIILMGIGLyvifgvyGLDTLALlalggalFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVG 385
|
330 340
....*....|....*....|.
gi 2206973352 351 NLALCGIPFLSGFYSKDLILE 371
Cdd:PRK08667 386 AVSIAALPPFNGFASELLLYE 406
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
60-318 |
3.70e-24 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 106.32 E-value: 3.70e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 60 MSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYYQNLKsy 139
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP-- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 140 nAGMLTA----LINRVGDVFILMVIS-WMLNYGSWnyIFYLGYMNNDKIMQIMG-----IMIILAAMTKSAQIPFSSWLP 209
Cdd:PRK08168 148 -FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSL--SLSALWAHLAAQGASPSlqaaaLLLVLAVILKTAQLPVHGWLI 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 210 AAMAAPTPVSALVHSStLVTAGVYLLIRFNILLMN*FFMK-ILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQLGLMM 288
Cdd:PRK08168 225 QVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARwLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFML 303
|
250 260 270
....*....|....*....|....*....|
gi 2206973352 289 SILSMGFPDLAFFHMLTHAMFKAMLFMCAG 318
Cdd:PRK08168 304 LECGLGLYELALLHLVAHSLYKAHAFLSAS 333
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-445 |
1.17e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 101.59 E-value: 1.17e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 57 LDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYYQNL 136
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDR 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 137 K-SYNAGMLTALINRVGD-VFILMVISWMLNYGSWN------------YIFYLGYMNNDKIMQIMGIMIILAAMT-KSAQ 201
Cdd:PRK12667 160 GdAVEAAIKYALIGAVGTtLYFLALAFLYATFGTLNmadlsakirglsFPLTGGLAGNPPLALGVALALALWAFTiKAAI 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 202 IPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFNILLMN*F---------FMKILLLLSMLTMFMAGISANYEFD 271
Cdd:PRK12667 240 FPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFGISpslidfraaLSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 272 LKKIIALSTLSQLGLMMSILSMGFP---DLAFFHMLTHAMFKAMLFMCAGVIIHMMNDmQDIRWMGGISLYIPMTSLCLN 348
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAAGT-RDIDELAGLGRKMPIASFAFL 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 349 ISNLALCGIPFLSGFYSKDLILEMMSITNMNLLMFFLyYVSMGLTMFYTIRLIlYIMIMDFNLISIYNLYDEDYIMLKGM 428
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVL-LIASAISLVGYFRAW-YSLFFGKPKSGEEVEHKESPSMSVVI 475
|
410
....*....|....*..
gi 2206973352 429 MILLLMSVISGSLLNWL 445
Cdd:PRK12667 476 LVLALAVLILGILALFL 492
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-371 |
2.37e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 100.41 E-value: 2.37e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 54 SILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELnlnrFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYY 133
Cdd:PRK07234 62 TLRADALSGYFILTNALVTLAVIFYCWESAKTRF----FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYP 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 134 QNLKSYNAGMLTALINRVGDVFILMVIswMLNYGSWNYIFYLGYMNNDKIMQIMGIMIILAamtKSAQIPFSSWLPAAMA 213
Cdd:PRK07234 138 RTDRAIWVGLRYLFYSNVAMLFYLIGA--VLVYQANGTFAFSGLATADPEAFALIALGLLV---KGGIFVSGLWLPLTHS 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 214 APTPVSALVHSSTLVTAGVYLLIRFNILLMN*FfmKILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQLGLMMSILSM 293
Cdd:PRK07234 213 EAEPPVSALLSGVVVKAGVFPLVRCALDVPGLD--LIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV 290
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2206973352 294 GfpdlAFFHmLTHAMFKAMLFMCAGViIHMMNDMQDIRWMGGISLYIPMTslclnISNLALCGIPFLSGFYSKDLILE 371
Cdd:PRK07234 291 G----GLYA-LAHGLVKSTLFLCAGA-LPSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLTLK 357
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
51-370 |
7.91e-21 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 96.50 E-value: 7.91e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 51 LVMSILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVL--LFVFSMILLIISPNMISILLGWDGLGLISYC 128
Cdd:PRK06521 72 LPFHLRLDALSAFFLLVISLLGAAASLYSLGYFREYEGKGPGAMGFFynLFLASMVLVLLADDAFSFLVAWETMSLSSWF 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 129 LVIYYQNLKS-YNAGMLTALINRVGDVFILMVIsWMLNYGSWNYIFylGYMNNDKIMQIMGIMIILAAM----TKSAQIP 203
Cdd:PRK06521 152 LVIANHREAEiRRAGFLYLLMAHAGALAILLAF-GLLARESGSYDF--AAMRAAHLSPFWASLVFLLALfgfgAKAGLVP 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 204 FSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFNILLM---N*FFMKILLLLSMLTMFMAGISANYEFDLKKIIALS 279
Cdd:PRK06521 229 LHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLgapGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYS 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 280 T-------LSQLGLMMSILSMGFPDLA-------FFHMLTHAMFKAMLFMCAGVIIHMMNDmQDIRWMGGISLYIPMTSL 345
Cdd:PRK06521 308 TienigiiFVGLGLAMVFIAYGMPLLAalaltaaLYHLLNHALFKSLLFLGAGAVLHATGT-RDMEKLGGLIRRMPWTAW 386
|
330 340
....*....|....*....|....*
gi 2206973352 346 CLNISNLALCGIPFLSGFYSKDLIL 370
Cdd:PRK06521 387 AFLIGCLAISALPPLNGFVSEWLLL 411
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-449 |
7.07e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 93.24 E-value: 7.07e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 57 LDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYYQNL 136
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 137 -KSYNAGMLTALINRVGDVFILMVISWML-NYGSWN--YIFYLGYMNNDKIMQIMGIMIILAAMTKSAQIPFSSWLPAAM 212
Cdd:PRK08376 168 wEAIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNmaYLAVKMSENPTVVAKIALALFIAGLAMKSGAVPVHMWLPDAY 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 213 -AAPTPVSALVHSSTLvtAGVYLLIRFNILL----MN*FFMK-ILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQLGL 286
Cdd:PRK08376 248 pAAPSSISAMLLVIKQ--AGLYALARVLFSIygpaINLATVGwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGY 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 287 MM-----SILSMGFPDL----------AFFHMLTHAMFKAMLFMCAGVIIHMMNdMQDIRWMGGISLYIPMTSLCLNISN 351
Cdd:PRK08376 326 MLlglgvGLAALGDPAMasygeialagGIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLARTMPKTTIAFLIGA 404
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 352 LALCGIPFLSGFYSKDLILEMMSITNMnllmfFLYYVSMGLTMFYTIRL--ILYIMIMDFNLISIYNLYDEDYIMLKGMM 429
Cdd:PRK08376 405 AAIVGLPPFNGFASKWLIYESSALFNP-----ILGVIAMIGSVLTLASFvkVFHTAFFGPPSEKVMNVKEPPKPMLVPML 479
|
410 420
....*....|....*....|
gi 2206973352 430 ILLLMSVISGsLLNWLIFSY 449
Cdd:PRK08376 480 ILAIAIIGMG-LFPWQISDK 498
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-457 |
3.84e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 90.65 E-value: 3.84e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 57 LDWMSLLFMMFVCLISSMVIYYSKSYMQSEL--NLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYYQ 134
Cdd:PRK06589 81 LEPLGLIFLLLIGFLWICALLYTPKYLAINNidSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTR 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 135 NLKSYNAGmLTALINRVGDVFILMVISWMLNYGSWNYIFYLGYMNNDKIMQIMGIMIILAAMTKSAQIPFSSWLPAAMAA 214
Cdd:PRK06589 161 NNISLSGG-YKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 215 PTPVSALVHSSTLVTAGVYLLIR-----FNILLMN*FFMK--ILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQLGLM 287
Cdd:PRK06589 240 HYPVSALLHAVIVVKTGLFCIYKillyiFGLSYLQRIFAEfnWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLA 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 288 M---SILSMGFPDLAFFHMLTHAMFKAMLFMCAGVIIHMMNDmQDIRWMGGISLYIPMTSLCLNISNLALCGIPFLSGFY 364
Cdd:PRK06589 320 LlsaFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKE-DQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFI 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 365 SKDLILEMMSITNMNLLMFFLYYVSMGLTMFYTIRLILYIMIMDFnlisiyNLYDEDYIMLKGMMILLLMSVISgSLLNW 444
Cdd:PRK06589 399 SKFLILLAASEQNQPWLSIIVMLVVIASSILSALYLLKILSSIYK------PSLSENSFITKSLPYLMQISVIT-CCCAL 471
|
410
....*....|...
gi 2206973352 445 LIFSYPYMIYLPF 457
Cdd:PRK06589 472 TLFYFIQILIREF 484
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
51-365 |
2.11e-18 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 88.81 E-value: 2.11e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 51 LVMSILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLV 130
Cdd:PRK07390 81 LSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLV 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 131 --IYYQNLksynagMLTA-----LINRVGDVFILMVISWMLNY-GSWNYIFYLGYMNNDKIMQIMGIMIILA----AMTK 198
Cdd:PRK07390 161 gfWYAQPL------VVTAardafLTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAATANLDPLTATLLGLAliagPTGK 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 199 SAQIPFSSWLPAAMAAPTPVSALvHSSTLVTAGVYLLIRFN-ILLMN*FFMKILLLLSMLTMFMAGISANYEFDLKKIIA 277
Cdd:PRK07390 235 CAQFPLHLWLDEAMEGPNPASIL-RNSVVVATGAWVLIKLQpVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALS 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 278 LSTLSQLGLMMSILSMGFPDLAFFHMLTHAMFKAMLFMCAGVIIhMMNDMQDIRWMGGISLYIPMTSLCLNISNLALCGI 357
Cdd:PRK07390 314 YSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSII-LTTITQDLTELGGLWSRMPATTLAFLVGSAGLVAL 392
|
....*...
gi 2206973352 358 PFLSGFYS 365
Cdd:PRK07390 393 LPLGGFWA 400
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
63-370 |
2.66e-18 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 87.90 E-value: 2.66e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 63 LFMMFVCLISSMVIYYSKSYMQSElNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYYQNLKSYNAG 142
Cdd:PRK08377 82 LFVLIIAIVSFIMSIFSLKAVEVE-PIDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEAS 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 143 MLTALINRVGDVFILMVISwmLNYGSWN-----YIFYLGYMNNDKIMQIMGIMIILAAMTKSAQIPFSSWLPAA-MAAPT 216
Cdd:PRK08377 161 MKYIVLGGIGSSFFLIGVA--LIYGATGtlnmaHIAQLAGTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAyQAAPH 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 217 PVSALVhSSTLVTAGVYLLIRFNILLMN*F----FMKILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQLGLMMSILS 292
Cdd:PRK08377 239 PITVMF-SAFVVKAGLYAMARILYLMQNANgwssVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALA 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 293 MGFP---DLAFFHMLTHAMFKAMLFMCAGVIIHMMNDMQdIRWMGGISLYIPMTSLCLNISNLALCGIPFLSGFYSKDLI 369
Cdd:PRK08377 318 LGTQagvDAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRI 396
|
.
gi 2206973352 370 L 370
Cdd:PRK08377 397 I 397
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
44-439 |
7.74e-16 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 80.81 E-value: 7.74e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 44 ITLNSSSLVMSILLDWMSLLFMMFVCLISSMVIYYSKSYMQSelNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLG 123
Cdd:PRK08668 54 LTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTK--NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMT 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 124 LISYcLVIYYQNLKSYNAGMLTALINRVGDVFILMVISWMLN-YGSWNYIFYLGYMNNDKIMQIMGIMIIL---AAMTKS 199
Cdd:PRK08668 132 FSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFADISQGLINDTSTGFALIVFLFllaFGVAKA 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 200 AQIPFSSWLPAAMA-APTPVSAlVHSSTLVTAGVYLLIRFNILLMN*-------------FFMKILLLLSMLTMFMAGIS 265
Cdd:PRK08668 211 GIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLVLYVLPGTklfsefgtyrgvpLFNYILAWLGNISIIVGTLM 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 266 ANYEFDLKKIIALSTLSQLGLMMSILSMGFP---DLAFFHMLTHAMFKAMLFMCAGVIIHMMNDmQDIRWMGGISLYIPM 342
Cdd:PRK08668 290 AILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIYRTGT-TKISEMGGLIEKMPF 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 343 TSLCLNISNLALCGIPFLSGFYSKDLILEMMSITNMNLLMFFLYYVSMGLTMfYTIRlILYIMIMDFNLISIYNLYDEDY 422
Cdd:PRK08668 369 TFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFL-YVFR-PLAGVFLGQLPSDHKDVKEAPL 446
|
410
....*....|....*..
gi 2206973352 423 IMLKGMMILLLMSVISG 439
Cdd:PRK08668 447 PMLIPMAILVLLNVVFG 463
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
203-401 |
2.59e-15 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 78.58 E-value: 2.59e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 203 PFSSWLP-AAMAAPTPVSALvHSSTLVTAGVYLLIRFNILLMN---*FFMKILLLLSMLTMFMAGISANYEFDLKKIIAL 278
Cdd:COG1008 227 PFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFALPLFPeasAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 279 STLSQLGLM------MSILSMGFpdlAFFHMLTHAMFKAMLFMCAGVIIHMMNDmQDIRWMGGISLYIPMTSLCLNISNL 352
Cdd:COG1008 306 SSVSHMGFVllgifaLNPLGLQG---AVLQMVSHGLITAALFLLVGVLYDRTHT-RDIADLGGLAKRMPVLAALFLLAAL 381
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 2206973352 353 ALCGIPFLSGFYSKDLILemMSITNMNLLMFFLYYVSMGLTMFYTIRLI 401
Cdd:COG1008 382 ASLGLPGTSGFVGEFLVL--LGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
193-321 |
1.50e-14 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 76.23 E-value: 1.50e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 193 LAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFNILLMN*FFMKILLLLSMLTMFM-AGISAnYEFD 271
Cdd:PRK08601 212 LAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASISVLIgTGISL-VQVD 289
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 2206973352 272 LKKIIALSTLSQLGLMMSILSMGFPDLAFFHMLTHAMFKAMLFMCAGVII 321
Cdd:PRK08601 290 YKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
54-366 |
8.79e-14 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 73.61 E-value: 8.79e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 54 SILLDWMSLLFMMFVCLISSMVIYYSKSYMQSE-LNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLV-I 131
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLERRgLLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaF 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 132 YYQNLKSYNAGMLTALINRVGDVFILMVISWMLNY-GSWNY---IFYLGYMNNDKIMQIMGIMIILAAMT-KSAQIPFSS 206
Cdd:COG1007 145 RRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGAtGSLNLagiAAALAAGGANSPLLLLGLVLVLAGLAfKLSAVPFHM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 207 WLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIRFNILLM---N*FFMKILLLLSMLTMFMAGISANYEFDLKKIIALSTL 281
Cdd:COG1007 225 WTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLLVEAFpglAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 282 SQLGLMMSILSMGFPD---LAFFHMLTHAMFKAMLFMCAGVIIHMMNDMQDIRWMGGISLYIPMTSLCLNISNLALCGIP 358
Cdd:COG1007 303 AHAGYLLLGLAAGTPLgvsAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIP 382
|
....*...
gi 2206973352 359 FLSGFYSK 366
Cdd:COG1007 383 PTAGFFGK 390
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
113-400 |
2.34e-13 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 72.62 E-value: 2.34e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 113 ISILLGWDGLGLISYCLVIYYQNLKSYNAGMLTALINRVGDVFILMVISWMLNY-GSWNYIFYLGYMNndkimqIMGIMI 191
Cdd:PRK12668 116 LTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAEtGSFAFGAIAGLGG------TAAWLI 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 192 ILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFnillmn*fFMKILLLLSM-LTMFMAGIS-ANYE 269
Cdd:PRK12668 190 LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARA--------FPGTELLIYIgAAMAVYGVFfALLE 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 270 FDLKKIIALSTLSQLGLMMSILSMGFP---DLAFFHMLTHAMFKAMLFMCAGVIIHMMNDMqDIRWMGGISLYIPMTSLC 346
Cdd:PRK12668 262 NDLRRLLSYHIVSQVGYMVAGIGIGTAlaiNGAVAHAFNHILYKGLLFMSAGAVLYRTGTE-KLTELGGLYRSMPLTALF 340
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 2206973352 347 LNISNLALCGIPFLSGFYSKDLILEMMSITNMNLLMFFLYYVSMGLTMFYTIRL 400
Cdd:PRK12668 341 CLVGALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLLLLLASAGTFLHFGIKL 394
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
202-363 |
1.49e-12 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 70.24 E-value: 1.49e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 202 IPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNILLMN--*FFMKILLLLSMLTMFMAGISANYEFDLKKIIAL 278
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSLLGGNapLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 279 STLSQLGLMMSILSMGFPDLA--------------FFHMLTHAMFKAMLFMCAGVIIHMMNdMQDIRWMGGISLYIPMTS 344
Cdd:PRK08042 276 HTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFRTG-HRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*....
gi 2206973352 345 LCLNISNLALCGIPFLSGF 363
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGF 373
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-370 |
1.68e-12 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 69.97 E-value: 1.68e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 57 LDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLnrFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYYQNL 136
Cdd:TIGR01972 75 VDGISLLLVLLTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGP 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 137 KSYNAGMLTALINRVGDVFILMVISWM--LNYGSWNYIFYLGYMNNDKIMQIMGIMIILAAMTKSAQIPFSSWLPAAMA- 213
Cdd:TIGR01972 153 NRIYAAMKFFLYTLAGSLLMLLAILGLyfLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVe 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 214 APTPVSALVhSSTLVTAGVYLLIRFNILLM---N*FFMKILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQLGL-MMS 289
Cdd:TIGR01972 233 APTAGSVIL-AGVLLKMGTYGFLRFNLPLFpdaSLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFvLLG 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 290 ILSMGFPDL--AFFHMLTHAMFKAMLFMCAGVIIHMMNDmQDIRWMGGISLYIPMTSLCLNISNLALCGIPFLSGFYSKD 367
Cdd:TIGR01972 312 IFSFNELGIsgAVFQMISHGLITAALFLLVGVLYERAHT-RDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
...
gi 2206973352 368 LIL 370
Cdd:TIGR01972 391 LIL 393
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
197-371 |
3.72e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 68.82 E-value: 3.72e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 197 TKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFNILLMN---*FFMKILLLLSMLTMFMAGISANYEFDL 272
Cdd:PRK07691 221 TKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFShdtSFTHYLILILALLTIIFGVIGAVAYFDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 273 KKIIALSTLSQLGLMMSILSMGFPDL---AFFHMLTHAMFKAMLFMCAGVIIHMMNDmQDIRWMGGISLYIPMTSLCLNI 349
Cdd:PRK07691 300 KKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIKITGT-TDLKKMGGLIKRYPVLGWMFFI 378
|
170 180
....*....|....*....|..
gi 2206973352 350 SNLALCGIPFLSGFYSKDLILE 371
Cdd:PRK07691 379 AALSLAGIPPLSGFYGKFFIVE 400
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
197-370 |
7.17e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 67.65 E-value: 7.17e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 197 TKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNIL----LMN*FFMKILLLLSMLTMFMAGISANYEFD 271
Cdd:PRK06458 226 TKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILidaaIGSDFPGRLLLIFGLLSVLVAAFFLLRQRD 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 272 LKKIIALSTLSQLGLMMSILSMGFPdLAFF----HMLTHAMFKAMLFMCAGVIIhMMNDMQDIRWMGGISLYIPMTSLCL 347
Cdd:PRK06458 305 IKRLFAYSSIEHMGLIAFALGIGGP-LGIFaallHMLNHSLTKSAIFFASGNVL-QKYGTRDINVIRGLLKVSPLTGWGL 382
|
170 180
....*....|....*....|...
gi 2206973352 348 NISNLALCGIPFLSGFYSKDLIL 370
Cdd:PRK06458 383 MLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
198-391 |
8.32e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 67.47 E-value: 8.32e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 198 KSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNILLMN*----FFMKILLLLSMLTMFMAGISANYEFDL 272
Cdd:PRK08676 219 KSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQSgaaeQFSNVLIGLGIFSIAVAAFSMLSQRNL 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 273 KKIIALSTLSQLGLMMSILSMGFPDLAF---FHMLTHAMFKAMLFMCAGvIIHMMNDMQDIRWMGGISLYIPMTSLCLNI 349
Cdd:PRK08676 298 KKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQPVAAWGVIL 376
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2206973352 350 SNLALCGIPFLSGFYSKDLILEMMS-----ITNMNLLMFFLYYVSMG 391
Cdd:PRK08676 377 GSAAIIGMPPFPLFLSKFFILLQLGgisvwLVLAVLLLLLLAASSFA 423
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
193-403 |
2.02e-10 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 63.43 E-value: 2.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 193 LAAMTKSAQIPFSsWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLMN*---FFMKILLLLSMLTMFMAGISANYE 269
Cdd:PRK12663 215 LAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQereLLHPLLATMAAITMVIGALGALAY 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 270 FDLKKIIALSTLSQLGLMMSILSMGFPDL---AFFHMLTHAMFKAMLFMCAGVIIHMMNDMQdIRWMGGISLYIPMTSLC 346
Cdd:PRK12663 294 KDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVRLTGYRS-LQYLGGLYRKEPLFGAL 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 2206973352 347 LNISNLALCGIPFLSGFYSKDLILEmMSITNMNLLMFFLYYVSMGLTMFYTIRLILY 403
Cdd:PRK12663 373 FLILIFAIGGLPPFSGFWGKVLLVQ-GALDNGAYILLALMLITSLITMYSLFRIFFL 428
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
198-371 |
3.60e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 59.21 E-value: 3.60e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 198 KSAQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFNILLMN*FFM-KILLLLSMLTMFMAGISANYEFDLKKI 275
Cdd:PRK12665 222 KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLdTLLMVVALLTMVVGILGAIAQSDIKRL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 276 IALSTLSQLGLMMSILSMGFP---DLAFFHMLTHAMFKAMLFMCAGvIIHMMNDMQDIRWMGGISLYIPMTSLCLNISNL 352
Cdd:PRK12665 301 LSFTLVSHIGYMVFGIALSTVaglSGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPAL 379
|
170
....*....|....*....
gi 2206973352 353 ALCGIPFLSGFYSKDLILE 371
Cdd:PRK12665 380 NLGGIPPFSGFIGKVALLE 398
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
202-370 |
1.89e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 57.13 E-value: 1.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 202 IPFSSWLPAAMA-APTPVSALvHSSTLVTAGVYLLIRFNILLM---N*FFMKILLLLSMLTMFMAGISANYEFDLKKIIA 277
Cdd:PRK05846 228 FPLHTWLPDAHVqAPTAGSVL-LAGILLKMGAYGLLRFSLPLFpdaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIA 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 278 LSTLSQLG-LMMSILSMGFPDL--AFFHMLTHAMFKAMLFMCAGVIIHMMNDmQDIRWMGGISLYIPMTSLCLNISNLAL 354
Cdd:PRK05846 307 YSSISHMGfVTLGIFAGNQLGIqgAIFQMISHGLSSAALFLLVGVLYDRLHT-RDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
170
....*....|....*.
gi 2206973352 355 CGIPFLSGFYSKDLIL 370
Cdd:PRK05846 386 LGLPGTSGFVGEFLIL 401
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-439 |
2.73e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 56.67 E-value: 2.73e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 57 LDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLN---RFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYY 133
Cdd:PRK12662 74 VDILSATMLVLVNFIAVMSVLYGIYPNRKEISVNkipSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMG 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 134 QNLKSYNAGMLTALINRVGDVFILMVISWM------LNYGSWNYIFYLGYMNNdkIMQIMGIMIILAAMTKSAQIPFSSW 207
Cdd:PRK12662 154 RDKKALVAAFEYLIIGTIGATFYLIGIGFLyaitgtLNMGDMFLIIQDLPTNR--AIQIGVLFIMVGLFIKAALFPFHKW 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 208 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRF-------NILLMN*FFMKILLLLSMLTMFMAGISANYEFDLKKIIALST 280
Cdd:PRK12662 232 LIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSS 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 281 LSQLG---LMMSILSMGFPDLAFFHMLTHAMFKAMLFMCAGVIIHMMnDMQDIRWMGGISLYIPMTSLCLNISNLALCGI 357
Cdd:PRK12662 312 ISHIGyiiLAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLEDCLNLWKSMPKITLAFVLLSLSLIGM 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 358 PFLSGFYSKDLILEMMSITNMNLLMFFLyYVSMGLTMFYTIRLILYIMIMDFNLISIYN--LYDEDYIMLKGMMILLLMS 435
Cdd:PRK12662 391 PPTSGFVAKWYILDAFIKSNAWIGLVVL-LVGSGLSVIYVWKIVEALYFESRMVESKANdkAFKTPNAMVLCIWIMAILS 469
|
....
gi 2206973352 436 VISG 439
Cdd:PRK12662 470 IIVG 473
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
198-365 |
8.84e-08 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 55.04 E-value: 8.84e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 198 KSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNILLM---N*FFMKILLLLSMLTMFMAGISANYEFDLK 273
Cdd:PRK12561 198 KLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNVQMLpdaHVYFAPALAILGVVNIIYGALNAFAQDNVK 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 274 KIIALSTLSQLG-LMMSILSmgFPDL----AFFHMLTHAMFKAMLFMCAGVIIHMMNDMQdIRWMGGISLYIPMTSLCLN 348
Cdd:PRK12561 277 RRLAYSSVSHMGfVLLGIAA--FTDLgisgAMLQMISHGLIAAALFFLTGVTYERTHTLS-IPNMGGLAKVMPKTFALFT 353
|
170
....*....|....*..
gi 2206973352 349 ISNLALCGIPFLSGFYS 365
Cdd:PRK12561 354 ASSMASLALPGMSGFVS 370
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
57-419 |
1.72e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 53.80 E-value: 1.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 57 LDWMSLLFMMFVCLISSMVIYYSKSYMQSE-LNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIY-YQ 134
Cdd:TIGR01770 68 VDNFALLIKLILLLSTLLTFFFALSYLSKEkINKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLkRK 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 135 NLKSYNAGMLTALINRVGDVFILMVISWMLNY-GSWNY----IFYLGYMNNDKIMQIMGIMIILAAMTKSAQIPFSSWLP 209
Cdd:TIGR01770 148 SRFSTEAGLKYFILGAFSSGLLLFGISLIYGFtGSLNFedllLFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVP 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 210 AAM-AAPTPVSALVHSSTLVtAGVYLLIRFNILLMN*FFM---KILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQLG 285
Cdd:TIGR01770 228 DVYeGAPTPVTAFFSIVPKI-AIFAVFLRLFLYILFGFSEawqIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVG 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 286 LMMSILSMGFPDLaFFHMLTHAMFKAMLFMCAGVIIHMMNDMQD-----IRWMGGISLYIPMTSLCLNISNLALCGIPFL 360
Cdd:TIGR01770 307 YILIGLLAGTLEG-IKAVLFYIFIYALMSLGAFGVLSLLRSYKDewieyISDFAGLFKTNPILAILILIFMFSLAGIPPL 385
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2206973352 361 SGFYSKDLILEMMSITNMNLLMFFLyYVSMGLTMFYTIRLILYIMIMDFNLISIYNLYD 419
Cdd:TIGR01770 386 AGFFGKFYVFFALLKSGLYWLAVIA-VLTSVIGAFYYLRVVKVMYFDKPERRIPSNPQS 443
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
58-446 |
1.83e-07 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 53.85 E-value: 1.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 58 DWMSLLFMMFVCLISSMVIYYSKSYMQ-SELNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYY-QN 135
Cdd:CHL00049 78 NNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKD 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 136 LKSYNAGMLTALINRVGDVFILMVISWM--LNYGSWNYIFYLGYMNNDKIMQIMGIMIILAAMT-----KSAQIPFSSWL 208
Cdd:CHL00049 158 VRSNEATMKYLLMGGASSSILVYGFSWLygLSGGEIELQEIVNGLINTQMYNSPGISIALIFITvgigfKLSLAPFHQWT 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 209 PAAM-AAPTPVSALVhSSTLVTAGVYLLIR-FNILL--MN*FFMKILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQL 284
Cdd:CHL00049 238 PDVYeGSPTPVVAFL-SVTSKVAASALATRiFDIPFyfSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQI 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 285 GLMMSILSMGFPDLAFFHMLTHAMFkaMLFMCAG-----VIIHMMNDMQDIRWMGGISLYIPMTSLCLNISNLALCGIPF 359
Cdd:CHL00049 317 GYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGtfaciVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPP 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 360 LSGFYSKDLILEMMSITNMNLLMFFLYYVSMgLTMFYTIRLILYIMIMDFNLISIY-------NLYDEDYIMLkGMMILL 432
Cdd:CHL00049 395 LAGFFGKLYLFWCGWQAGLYFLVSIGLLTSV-ISIYYYLKIIKLLMTGRNQEITPYvrnyrrsPLRSNNSIEL-SMIVCV 472
|
410
....*....|....
gi 2206973352 433 LMSVISGSLLNWLI 446
Cdd:CHL00049 473 IASTIPGISMNPII 486
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
54-366 |
2.40e-07 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 53.29 E-value: 2.40e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 54 SILLDWMSLLFMMFVCLISSMVIYYSKSYMQSElNLNRFIILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIY- 132
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYLEDR-GRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 133 YQNLKSYNAGMLTALINRVGDVFILMVISWMLNY-GSWNY---IFYLGYMNNDKIMQIMGIMIILAAMT-KSAQIPFSSW 207
Cdd:PRK05777 147 RDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGAtGSLSFagiAKALADGSGNSLLLLFGLVFLLVGLAfKLSAVPFHMW 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 208 LPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFNILL---MN*FFMKILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQ 283
Cdd:PRK05777 227 TPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVAfggLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAH 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 284 LGLMMSILSMGFPD---LAFFHMLTHAMFKAMLFMCAGVIIHMMNDMQDIRWMGGISLYIPMTSLCLNISNLALCGIPFL 360
Cdd:PRK05777 306 AGYLLVGLAAGTAEgysAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPT 385
|
....*.
gi 2206973352 361 SGFYSK 366
Cdd:PRK05777 386 AGFWGK 391
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
226-391 |
3.30e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 53.11 E-value: 3.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 226 TLVTAGVYLLIRFNILLMN*FFMKILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQLGLMMSILSMGFP---DLAFFH 302
Cdd:PRK06277 244 VLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPlgiVAGIFH 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 303 MLTHAMFKAMLFMCAGvIIHMMNDMQDIRWMGGISLYIPMTSLCLNISNLALCGIPFLSGFYSKDLILEMMSITNMNLLM 382
Cdd:PRK06277 324 AINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELA 402
|
....*....
gi 2206973352 383 FFLYYVSMG 391
Cdd:PRK06277 403 IIMIIVSIG 411
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
193-370 |
1.04e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 51.39 E-value: 1.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 193 LAAMTKSAQIPFSSWLPAA-MAAPTPVSALVHSSTLVtaGVYLLIRFNILL-------MN*FFMKILLLLSMLTMFMAGI 264
Cdd:PRK12666 218 VVFLIKAAMWPLNFWLPPAyAAASAPVAALFAIMTKV--GIYAILRLSTLLfgpeagaSAGFGQDWLLPGGLATLAFGAI 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 265 SANYEFDLKKIIALSTLSQLGLMMSILSMGFPDL---AFFHMLTHAMFKAMLFMCAGVI------------IHMMNDMQD 329
Cdd:PRK12666 296 GVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAAtaaALYYLVHSTLAAAALFLLADLVerqrgaaadrlaVTPELYDLD 375
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 2206973352 330 IRWMGGISLYIPMT----SLCLNISNLALCGIPFLSGFYSKDLIL 370
Cdd:PRK12666 376 EEEEEEVGVAIPATmallGLLFFICALALAGLPPLSGFLGKFALL 420
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
193-406 |
1.35e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 50.59 E-value: 1.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 193 LAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIrfniLLMN*FFMKILLLLSMLTMFMAGISANYEFDL 272
Cdd:MTH00112 100 LALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLL----MTSNSLNPTLLLTLAILSTLIGGWGGLNQTQL 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 273 KKIIALSTLSQLGLMMSILSMGfPDLAFFHMLTHAMFKAMLFMcagvIIHMMNdMQDIRWMGGISLYIPMTSLCLNISNL 352
Cdd:MTH00112 176 RKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL----TLNTTS-TKTLKDMMTSWTKSPTLNTTLMLTLL 249
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 2206973352 353 ALCGIPFLSGFYSKDLILEMMSITNMNLLMFFLYYVSMgLTMFYTIRLILYIMI 406
Cdd:MTH00112 250 SLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSL-LSLFFYLRLTYISTI 302
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
198-366 |
4.99e-05 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 46.20 E-value: 4.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 198 KSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFNILLMN*F---FMKILLLLSMLTMFMAGISANYEFDLK 273
Cdd:PRK02504 223 KISAVPFHQWTPDVYeGSPTPVVAFL-SVGSKAAGFALAIRLLVTAFPSFdeqWKLLFTALAILSMVLGNVVALAQTSMK 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 274 KIIALSTLSQLGLMMSILSMGFPD---LAFFHMLTHAMFKAMLFMCagVIIHMMNDMQD-IRWMGGISLYIPMTSLCLNI 349
Cdd:PRK02504 302 RMLAYSSIGQAGFVMIGLVAGTEAgyaSMVFYLLAYLFMNLGAFAC--VILFSLRTGTDqISDYAGLYQKDPLLTLGLSL 379
|
170
....*....|....*..
gi 2206973352 350 SNLALCGIPFLSGFYSK 366
Cdd:PRK02504 380 CLLSLGGIPPLAGFFGK 396
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
44-92 |
1.04e-04 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 40.10 E-value: 1.04e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 2206973352 44 ITLNSSSLVMSILLDWMSLLFMMFVCLISSMVIYYSKSYMQSELNLNRF 92
Cdd:pfam00662 2 LSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
240-447 |
1.13e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 44.43 E-value: 1.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 240 ILLMN*FFMKILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQLGLMMSILSMGFPDLAFFHMLTHAMFKAMLFMCAGV 319
Cdd:MTH00160 135 ILLSYLINNNFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKF 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 320 IIHMMNDMQDirwmggISLYIPMTSLCLNISNLALCGIPFLSGFYSKDLILEMMSITNMNLLMFFLYYVSMgLTMFYTIR 399
Cdd:MTH00160 215 NIFFLNQLFN------SNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSL-ITLYFYLR 287
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2206973352 400 LILYIMIMDFNLISIYNLYDEDYIMLKgMMILLLMSVISGSLLNWLIF 447
Cdd:MTH00160 288 ISYSSLMLNYNKNKWNLKKKKNKFSLI-LNFLSFISLFGLILSSLLFL 334
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
151-363 |
1.31e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 44.66 E-value: 1.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 151 VGDVFILMVISWMLNY-GSWNYIFYLGYMNNDKIMQIMGIMIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVT 229
Cdd:MTH00217 171 IGSVFMLLGIFTLYSYaGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLK 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 230 AGVYLLIRFNILLM---N*FFMKILLLLSMLTMFMAGISANYEFDLKKIIALSTLSQLGLM-MSILSMGFPDL--AFFHM 303
Cdd:MTH00217 251 LGGYGFIRFSWPLLpeaSEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVtLGIFSHTIQGLvaAIFLM 330
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 304 LTHAMFKAMLFMcAGVIIHMMNDMQDIRWMGGISLYIPMTSLCLNISNLALCGIPFLSGF 363
Cdd:MTH00217 331 LAHGLVSSALFI-AVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNF 389
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
93-458 |
2.12e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 43.95 E-value: 2.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 93 IILVLLFVFSMILLIISPNMISILLGWDGLGLISYCLVIYYQNLKSYNAGMLTALINRVGDVFILMVISWMLNYGSWNYI 172
Cdd:PRK12664 66 MLCYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVGASGQAQNGQYTGY 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 173 FYLGYMnndkimqimgimiiLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSstLVTAGVYLLIrfniLLMN*FFMKILL 252
Cdd:PRK12664 146 CKLLFM--------------LGLLINCACFPASSWVVDAYPAASNFGIIVLS--LFTTKVAALV----LLLFFSGEEILL 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 253 LLSMLTMFMAGISANYEFDLKKIIALSTLSQLGLMMSILSMGFP-----DLAFFHMLTHAMFKAMLFMCAGVIIHMMNDM 327
Cdd:PRK12664 206 FLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSsgvaiGILILQIVLSVVYQTLLFMVADSVINRTRKF 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 328 qDIRWMGGIsLYIPMTSLCLNISNLALCGIPFLSGFYSKDLILEMMSITNMNLLMFFLYYVSMGLTMFYT--IRLILYIM 405
Cdd:PRK12664 286 -NLNRVGGL-FKMSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYKKLFLICSLLLFASvgLKFFWYAF 363
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2206973352 406 ImdfNLISIYNLYDEDYIMLK-GMMILLLMSVISGSLLNW-LIFSYPYMIYLPFN 458
Cdd:PRK12664 364 I---SKSKSKPEAEKVYIGSKlSMIILVLICVVLGMFNSYlLFYNLPSFVYTLKS 415
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
202-369 |
3.32e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 43.54 E-value: 3.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 202 IPFSSWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFNILLMN---*FFMKILLLLSMLTMFMAGISANYEFDLKKIIA 277
Cdd:PRK06473 222 VPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVGLFPeawVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVA 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 278 LSTLSQLGLMMSILSMGFP---DLAFFHMLTHAMFKAMLFMCAGVIIHMM--NDMQDIRWMGGISLYIPMTSLCLNISNL 352
Cdd:PRK06473 301 YSSIGHMGYILLAAAAATPlsiLAAVFQMISHGLISALLFLLVGVVYKKTgsRDVDVLRGLLNPERGLPITGSLMILGVM 380
|
170
....*....|....*..
gi 2206973352 353 ALCGIPFLSGFYSKDLI 369
Cdd:PRK06473 381 ASAGIPGMVGFIAEFLV 397
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
202-371 |
4.82e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 42.78 E-value: 4.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 202 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLMN*FFMKI---LLLLSMLTMFMAGISANYEFDLKKIIAL 278
Cdd:PRK07363 222 VPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVapgLAIIGTISVIYGALSAIAQKDIKRMVAY 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206973352 279 STLSQLGLMMSILSMGFPDL---AFFHMLTHAMFKAMLFMCAGvIIHMMNDMQDIRWMGGISLYI---PMTSLCLNISNL 352
Cdd:PRK07363 302 SSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMNPIrglPLTSALLVLAGM 380
|
170
....*....|....*....
gi 2206973352 353 ALCGIPFLSGFYSKDLILE 371
Cdd:PRK07363 381 ASAGIPGLVGFVAEFIVFQ 399
|
|
| |
