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Conserved domains on  [gi|2206977007|ref|YP_010295992|]
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NADH dehydrogenase subunit 2 (mitochondrion) [Bagrus docmak]

Protein Classification

NADH dehydrogenase subunit 2( domain architecture ID 11475913)

NADH dehydrogenase subunit 2 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), which functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND2 MTH00135
NADH dehydrogenase subunit 2; Provisional
 1-329 0e+00

NADH dehydrogenase subunit 2; Provisional


:

Pssm-ID: 177193 [Multi-domain]  Cd Length: 347  Bit Score: 522.83  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007   1 MSPYVLMILMSSLGLGTTLTFMSSHWLLAWMGLEINTLAILPLMTQHHHPRAVEATTKYFLAQAAAAATILFASTINAWT 80
Cdd:MTH00135    1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  81 MGEWNIHCLTHPIAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVAPSmHPQLLTMLGLL 160
Cdd:MTH00135   81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 161 SVFIGGWGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILALITYIIMTSATFLTFKLLHSTKINTLNMNWTKTPAI 240
Cdd:MTH00135  160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 241 TTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFYLRLCYSMALTTSPNTNNSLTPWRLNNT 320
Cdd:MTH00135  240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319


                  ....*....
gi 2206977007 321 QNMIPLAAS 329
Cdd:MTH00135  320 QLTLPLAIS 328
 
Name Accession Description Interval E-value
ND2 MTH00135
NADH dehydrogenase subunit 2; Provisional
 1-329 0e+00

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177193 [Multi-domain]  Cd Length: 347  Bit Score: 522.83  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007   1 MSPYVLMILMSSLGLGTTLTFMSSHWLLAWMGLEINTLAILPLMTQHHHPRAVEATTKYFLAQAAAAATILFASTINAWT 80
Cdd:MTH00135    1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  81 MGEWNIHCLTHPIAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVAPSmHPQLLTMLGLL 160
Cdd:MTH00135   81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 161 SVFIGGWGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILALITYIIMTSATFLTFKLLHSTKINTLNMNWTKTPAI 240
Cdd:MTH00135  160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 241 TTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFYLRLCYSMALTTSPNTNNSLTPWRLNNT 320
Cdd:MTH00135  240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319


                  ....*....
gi 2206977007 321 QNMIPLAAS 329
Cdd:MTH00135  320 QLTLPLAIS 328
NuoN COG1007
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ...
 4-300 1.98e-22

NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440631 [Multi-domain]  Cd Length: 473  Bit Score: 97.49  E-value: 1.98e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007   4 YVLMILMSslgLGTTLTFMSSHWLLAWMGLEINTLAILPL-MTQHHHPRAVEATTKYFLAQAAAAATILF--------AS 74
Cdd:COG1007   105 YALLLFAT---LGMMLMASANDLLTLFLGLELLSLSLYVLvAFRRDDRRSSEAALKYFLLGALSSGFLLYgisllygaTG 181

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  75 TIN----AWTMGEWNIHCLTHPIAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVA---- 146
Cdd:COG1007   182 SLNlagiAAALAAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLveaf 261

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 147 PSMHPQLLTMLGLLSV---FIGGWGGLNQTQLRKILAYSSIAHLGWMIVIV----QFKPQLTILALITYIIMTSATFLTF 219
Cdd:COG1007   262 PGLAADWQLLLAVLAVlsmTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLaagtPLGVSAALFYLLAYLFMNLGAFAVI 341

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 220 KLL-----HSTKINTLNMNWTKTPAITTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFYL 294
Cdd:COG1007   342 LLLsrkggEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYL 421


                  ....*.
gi 2206977007 295 RLCYSM 300
Cdd:COG1007   422 RVVKAM 427
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
 23-268 7.88e-20

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 88.14  E-value: 7.88e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  23 SSHWLLAWMGLEINTLAILPLMT-QHHHPRAVEATTKYFLAQAAAAATILFASTINAWTMGEWNIHCL-----------T 90
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  91 HPIAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIM-STWQKLAPFALIiQVAPSMHP------QLLTMLGLLSVF 163
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGYGLI-RRSLLYLPsspfiqQILLILAIISML 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 164 IGGWGGLNQTQLRKILAYSSIAHLGWMIVIV----QFKPQLTILALITYIIMTSATFLTFKLL-----HSTKINTLNMNW 234
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSViyrrvHTRNIRDYGGLA 239

                         250       260       270
                  ....*....|....*....|....*....|....
gi 2206977007 235 TKTPAITTIATLTLLSLGGLPPLTGFMPKWLILQ 268
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
NDH_I_N TIGR01770
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ...
 4-306 1.75e-16

proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]


Pssm-ID: 273795 [Multi-domain]  Cd Length: 468  Bit Score: 79.99  E-value: 1.75e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007   4 YVLMILMSSLGLGttLTFMSSHWLLAWMGLEINTLAILPLMT-QHHHPRAVEATTKYFLAQAAAAATILF-ASTINAWTm 81
Cdd:TIGR01770 104 FYILLLFALLGIF--LLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFgISLIYGFT- 180

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  82 GEWNIHCLTHP------------IAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVAPSM 149
Cdd:TIGR01770 181 GSLNFEDLLLFlsngmlnislllLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYI 260

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 150 H-------PQLLTMLGLLSVFIGGWGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILALI----TYIIMTSATFLT 218
Cdd:TIGR01770 261 LfgfseawQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLfyifIYALMSLGAFGV 340

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 219 FKLLHSTK------INTLNMNWTKTPAITTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYF 292
Cdd:TIGR01770 341 LSLLRSYKdewieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFY 420

                         330
                  ....*....|....
gi 2206977007 293 YLRLCYSMALTTSP 306
Cdd:TIGR01770 421 YLRVVKVMYFDKPE 434
 
Name Accession Description Interval E-value
ND2 MTH00135
NADH dehydrogenase subunit 2; Provisional
 1-329 0e+00

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177193 [Multi-domain]  Cd Length: 347  Bit Score: 522.83  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007   1 MSPYVLMILMSSLGLGTTLTFMSSHWLLAWMGLEINTLAILPLMTQHHHPRAVEATTKYFLAQAAAAATILFASTINAWT 80
Cdd:MTH00135    1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  81 MGEWNIHCLTHPIAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVAPSmHPQLLTMLGLL 160
Cdd:MTH00135   81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 161 SVFIGGWGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILALITYIIMTSATFLTFKLLHSTKINTLNMNWTKTPAI 240
Cdd:MTH00135  160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 241 TTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFYLRLCYSMALTTSPNTNNSLTPWRLNNT 320
Cdd:MTH00135  240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319


                  ....*....
gi 2206977007 321 QNMIPLAAS 329
Cdd:MTH00135  320 QLTLPLAIS 328
ND2 MTH00070
NADH dehydrogenase subunit 2; Provisional
 1-324 1.89e-136

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177142 [Multi-domain]  Cd Length: 346  Bit Score: 391.59  E-value: 1.89e-136
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007   1 MSPYVLMILMSSLGLGTTLTFMSSHWLLAWMGLEINTLAILPLMTQHHHPRAVEATTKYFLAQAAAAATILFASTINAWT 80
Cdd:MTH00070    1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  81 MGEWNIHCLTHPIAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVAPSMHPQLLTMLGLL 160
Cdd:MTH00070   81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 161 SVFIGGWGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILALITYIIMTSATFLTFKLLHSTKINTLNMNWTKTPAI 240
Cdd:MTH00070  161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 241 TTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFYLRLCYSMALTTSPNTNNSLTPWRLNNT 320
Cdd:MTH00070  241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320


                  ....
gi 2206977007 321 QNMI 324
Cdd:MTH00070  321 TNNL 324
ND2 MTH00112
NADH dehydrogenase subunit 2; Provisional
 1-322 5.87e-119

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214423 [Multi-domain]  Cd Length: 346  Bit Score: 347.20  E-value: 5.87e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007   1 MSPYVLMILMSSLGLGTTLTFMSSHWLLAWMGLEINTLAILPLMTQHHHPRAVEATTKYFLAQAAAAATILFASTINAWT 80
Cdd:MTH00112    1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  81 MGEWNIHCLTHPIAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVAPSMHPQLLTMLGLL 160
Cdd:MTH00112   81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 161 SVFIGGWGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILALITYIIMTSATFLTFKLLHSTKINTLNMNWTKTPAI 240
Cdd:MTH00112  161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 241 TTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFYLRLCYSMALTTSPNTNNSLTPWRLNNT 320
Cdd:MTH00112  241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320


                  ..
gi 2206977007 321 QN 322
Cdd:MTH00112  321 KN 322
ND2 MTH00105
NADH dehydrogenase subunit 2; Provisional
 1-327 3.19e-114

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177167 [Multi-domain]  Cd Length: 347  Bit Score: 335.28  E-value: 3.19e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007   1 MSPYVLMILMSSLGLGTTLTFMSSHWLLAWMGLEINTLAILPLMTQHHHPRAVEATTKYFLAQAAAAATILFASTINAWT 80
Cdd:MTH00105    1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  81 MGEWNIHCLTHPIAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVAPSMHPQLLTMLGLL 160
Cdd:MTH00105   81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 161 SVFIGGWGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILALITYIIMTSATFLTFKLLHSTKINTLNMNWTKTPAI 240
Cdd:MTH00105  161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 241 TTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFYLRLCYSMALTTSPNTNNSLTPWRLNNT 320
Cdd:MTH00105  241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320


                  ....*..
gi 2206977007 321 QNMIPLA 327
Cdd:MTH00105  321 KPMTLLP 327
ND2 MTH00200
NADH dehydrogenase subunit 2; Provisional
 1-324 2.12e-103

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177246 [Multi-domain]  Cd Length: 347  Bit Score: 307.67  E-value: 2.12e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007   1 MSPYVLMILMSSLGLGTTLTFMSSHWLLAWMGLEINTLAILPLMTQHHHPRAVEATTKYFLAQAAAAATILFASTINAWT 80
Cdd:MTH00200    1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  81 MGEWNIHCLTHPIAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVAPSMHPQLLTMLGLL 160
Cdd:MTH00200   81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 161 SVFIGGWGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILALITYIIMTSATFLTFKLLHSTKINTLNMNWTKTPAI 240
Cdd:MTH00200  161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 241 TTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFYLRLCYSMALTTSPNTNNSLTPWRLNNT 320
Cdd:MTH00200  241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320


                  ....
gi 2206977007 321 QNMI 324
Cdd:MTH00200  321 SNLL 324
ND2 MTH00041
NADH dehydrogenase subunit 2; Validated
 1-329 3.02e-80

NADH dehydrogenase subunit 2; Validated


Pssm-ID: 177116 [Multi-domain]  Cd Length: 349  Bit Score: 248.69  E-value: 3.02e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007   1 MSPYVLMILMSSLGLGTTLTFMSSHWLLAWMGLEINTLAILPLMTQHHHPRAVEATTKYFLAQAAAAATILFASTINAWT 80
Cdd:MTH00041    1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  81 MGEWNIHCLTHPIAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVAPSMHPQLLTMLGLL 160
Cdd:MTH00041   81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 161 SVFIGGWGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILALITYIIMTSATFLTFKLLHSTKINTLNMNWTKTPAI 240
Cdd:MTH00041  161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 241 TTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFYLRLCYSMALTTSPNTNNSLTPWRLNNT 320
Cdd:MTH00041  241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320


                  ....*....
gi 2206977007 321 QNMIPLAAS 329
Cdd:MTH00041  321 ITVYGVILS 329
ND2 MTH00160
NADH dehydrogenase subunit 2; Provisional
 1-312 4.00e-49

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214442 [Multi-domain]  Cd Length: 335  Bit Score: 167.69  E-value: 4.00e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007   1 MSPYVLMILMSSLGLGTTLTFMSSHWLLAWMGLEINTLAILPLMTQHHHPRAVEATTKYFLAQAAAAATILFASTINAWT 80
Cdd:MTH00160    2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  81 MGEWNIhclthpIAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVapsMHPQLLTMLGLL 160
Cdd:MTH00160   82 LMLFNN------ISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 161 SVFIGGWGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILALITYIIMTSATFLTFKLLHSTKINTLNMNWTKTPAI 240
Cdd:MTH00160  153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2206977007 241 TTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFYLRLCYSMALTTSPNTNNSL 312
Cdd:MTH00160  233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNL 304
ND2 MTH00144
NADH dehydrogenase subunit 2; Provisional
 1-305 2.38e-45

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214432 [Multi-domain]  Cd Length: 328  Bit Score: 157.74  E-value: 2.38e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007   1 MSPYVLMILMSSLgLGTTLTFMSSHWLLAWMGLEINTLAILPLMTQHHHPRAVEATTKYFLAQAAAAATILFASTINAWT 80
Cdd:MTH00144    2 SSPSNLLFLFLMV-MGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  81 MGEWNIhclthpiaITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVAPSMHPQ-LLTMLGL 159
Cdd:MTH00144   81 SFSWFS--------MSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAyLLCVISV 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 160 LSVFIGGWGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILALITYIImtSATFLTFKLLHSTKINTLNMNWTKTPA 239
Cdd:MTH00144  153 LSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIV--SSGFLFFSLWSGDSGSMKDLGSLKPSY 230

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2206977007 240 ITTIATLTLLSLGG-LPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFYLRLCYSMALTTS 305
Cdd:MTH00144  231 KTGLSIISLLLSLGgLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSS 297
ND2 MTH00011
NADH dehydrogenase subunit 2; Validated
 1-299 1.57e-43

NADH dehydrogenase subunit 2; Validated


Pssm-ID: 164587 [Multi-domain]  Cd Length: 330  Bit Score: 153.01  E-value: 1.57e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007   1 MSPYvLMILMSSLGLGTTLTFMSSHWLLAWMGLEINTLAILPLMTQHHHPRAVEATTKYFLAQAAAAATILFASTINawt 80
Cdd:MTH00011    4 TFPT-MFLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMM--- 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  81 mgeWNIHCLTHPIAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVAPSMHPQLLTMLGLL 160
Cdd:MTH00011   80 ---WSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 161 SVFIGGWGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILALITYIIMTSATFLTFKLLHSTKINTLNMNWTKTPAI 240
Cdd:MTH00011  157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2206977007 241 TTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFYLRLCYS 299
Cdd:MTH00011  237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFN 295
ND2 MTH00197
NADH dehydrogenase subunit 2; Provisional
 7-299 1.66e-37

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177244 [Multi-domain]  Cd Length: 323  Bit Score: 136.73  E-value: 1.66e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007   7 MILMSSLGLGTTLTFMSSHWLLAWMGLEINTLAILPLMTQHHHPRAVEATTKYFLAQAAAAATILFASTINAWTMGEWNI 86
Cdd:MTH00197    1 FLFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNLYLSLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  87 HCLthpiaitLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPfaLIIQVAPSMHPQLLTMLGLLSVFIGG 166
Cdd:MTH00197   81 SVV-------LVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGG 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 167 WGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILALITYIIMTSATFLTFKLLHSTKINTLNMNWTKTPAITTIATL 246
Cdd:MTH00197  152 IGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGL 231

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2206977007 247 TLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFYLRLCYS 299
Cdd:MTH00197  232 SFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYK 284
ND2 MTH00196
NADH dehydrogenase subunit 2; Provisional
 15-296 1.23e-23

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214453 [Multi-domain]  Cd Length: 365  Bit Score: 100.10  E-value: 1.23e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  15 LGTTLTFMSSHWLLAWMGLEINTLAILPLMTQHHHP-RAVEATTKYFLAQAAAAATILFASTINAWTMGEWNIHCL---- 89
Cdd:MTH00196    4 LGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSgYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYInlvl 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  90 ---------THPIAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVAPsmHPQLLTMLGLL 160
Cdd:MTH00196   84 nsgqsfssvSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGL--NVNILLIGGLF 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 161 SVFIGGWGGLNQTQLRKILAYSSIAHLG---WMIVIVQFKP-QLTILALITYIIMTSATFlTFKLLHSTKINT------L 230
Cdd:MTH00196  162 SLFVGAIGALNQTKIKRLLAYSGIGHMGfvlWGIEIGSFESiQASLVYLFIYIIMSICVF-SIILALNVYKNLiiefsgL 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2206977007 231 NMNwtkTPAITTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFYLRL 296
Cdd:MTH00196  241 SRR---LPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
NuoN COG1007
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ...
 4-300 1.98e-22

NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440631 [Multi-domain]  Cd Length: 473  Bit Score: 97.49  E-value: 1.98e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007   4 YVLMILMSslgLGTTLTFMSSHWLLAWMGLEINTLAILPL-MTQHHHPRAVEATTKYFLAQAAAAATILF--------AS 74
Cdd:COG1007   105 YALLLFAT---LGMMLMASANDLLTLFLGLELLSLSLYVLvAFRRDDRRSSEAALKYFLLGALSSGFLLYgisllygaTG 181

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  75 TIN----AWTMGEWNIHCLTHPIAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVA---- 146
Cdd:COG1007   182 SLNlagiAAALAAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLveaf 261

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 147 PSMHPQLLTMLGLLSV---FIGGWGGLNQTQLRKILAYSSIAHLGWMIVIV----QFKPQLTILALITYIIMTSATFLTF 219
Cdd:COG1007   262 PGLAADWQLLLAVLAVlsmTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLaagtPLGVSAALFYLLAYLFMNLGAFAVI 341

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 220 KLL-----HSTKINTLNMNWTKTPAITTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFYL 294
Cdd:COG1007   342 LLLsrkggEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYL 421


                  ....*.
gi 2206977007 295 RLCYSM 300
Cdd:COG1007   422 RVVKAM 427
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
 23-268 7.88e-20

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 88.14  E-value: 7.88e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  23 SSHWLLAWMGLEINTLAILPLMT-QHHHPRAVEATTKYFLAQAAAAATILFASTINAWTMGEWNIHCL-----------T 90
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  91 HPIAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIM-STWQKLAPFALIiQVAPSMHP------QLLTMLGLLSVF 163
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGYGLI-RRSLLYLPsspfiqQILLILAIISML 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 164 IGGWGGLNQTQLRKILAYSSIAHLGWMIVIV----QFKPQLTILALITYIIMTSATFLTFKLL-----HSTKINTLNMNW 234
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSViyrrvHTRNIRDYGGLA 239

                         250       260       270
                  ....*....|....*....|....*....|....
gi 2206977007 235 TKTPAITTIATLTLLSLGGLPPLTGFMPKWLILQ 268
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
ND2 MTH00199
NADH dehydrogenase subunit 2; Provisional
 8-296 1.60e-18

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177245 [Multi-domain]  Cd Length: 460  Bit Score: 86.22  E-value: 1.60e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007   8 ILMSSLGLGTTLTFMSSHWLLAWMGLEINTLAILPLMT-QHHHPRAVEATTKYFLAQAAAAATILFASTINAWTMGEWNI 86
Cdd:MTH00199  101 ILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSI 180

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  87 H----CLTHPIAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVAPSMhpQLLTMLGLLSV 162
Cdd:MTH00199  181 QginsILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVT--NVVLICAVLSI 258

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 163 FIGGWGGLNQTQLRKILAYSSIAHLGWMI---VIVQFKP-QLTILALITYIIMTSATFLTFKLLHSTK--INTLNMNWTK 236
Cdd:MTH00199  259 IYGAIGALNQTKIKRLLAYSGIGHMGFILfgvAIGSFESiQASLIYMIIYVIMSICSFSIILSLKLTKglIVEVSGLSRK 338

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 237 TPAITTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFYLRL 296
Cdd:MTH00199  339 NPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
PRK05777 PRK05777
NADH-quinone oxidoreductase subunit NuoN;
4-300 1.11e-16

NADH-quinone oxidoreductase subunit NuoN;


Pssm-ID: 235603 [Multi-domain]  Cd Length: 476  Bit Score: 80.64  E-value: 1.11e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007   4 YVLMILMSslgLGTTLTFMSSHWLLAWMGLEINTLAILPL-MTQHHHPRAVEATTKYFLAQAAAAATILF--------AS 74
Cdd:PRK05777  106 YLLVLFAL---LGMMVMVSANDLLTLFLGLELLSLPLYALaALRRDRRRSLEAAIKYFVLGALASGFLLYgmsllygaTG 182

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  75 TINAWTMGEWNIHCLTHP----IAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVA---- 146
Cdd:PRK05777  183 SLSFAGIAKALADGSGNSllllFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLvvaf 262

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 147 PSMHP---QLLTMLGLLSVFIGGWGGLNQTQLRKILAYSSIAHLGWMIV----IVQFKPQLTILALITYIIMTSATF--- 216
Cdd:PRK05777  263 GGLSEdwqQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVglaaGTAEGYSAVLFYLLAYLFMTLGAFgvi 342

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 217 --LTFKLLHSTKINTLN-MNWTKtPAITTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFY 293
Cdd:PRK05777  343 slLRRKGGEAESISDFAgLSKRS-PLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYY 421


                  ....*..
gi 2206977007 294 LRLCYSM 300
Cdd:PRK05777  422 LRVIKLM 428
NDH_I_N TIGR01770
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ...
 4-306 1.75e-16

proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]


Pssm-ID: 273795 [Multi-domain]  Cd Length: 468  Bit Score: 79.99  E-value: 1.75e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007   4 YVLMILMSSLGLGttLTFMSSHWLLAWMGLEINTLAILPLMT-QHHHPRAVEATTKYFLAQAAAAATILF-ASTINAWTm 81
Cdd:TIGR01770 104 FYILLLFALLGIF--LLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFgISLIYGFT- 180

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  82 GEWNIHCLTHP------------IAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVAPSM 149
Cdd:TIGR01770 181 GSLNFEDLLLFlsngmlnislllLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYI 260

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 150 H-------PQLLTMLGLLSVFIGGWGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILALI----TYIIMTSATFLT 218
Cdd:TIGR01770 261 LfgfseawQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLfyifIYALMSLGAFGV 340

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 219 FKLLHSTK------INTLNMNWTKTPAITTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYF 292
Cdd:TIGR01770 341 LSLLRSYKdewieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFY 420

                         330
                  ....*....|....
gi 2206977007 293 YLRLCYSMALTTSP 306
Cdd:TIGR01770 421 YLRVVKVMYFDKPE 434
HyfB COG0651
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ...
 15-301 1.78e-16

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 440416 [Multi-domain]  Cd Length: 430  Bit Score: 79.81  E-value: 1.78e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  15 LGTTLTFMSSHWLLAWMGLEINTLAILPLMTQHHHPRAVEATTKYFLAQAAAAATILFASTINAWTMGEWNIHCLTHPI- 93
Cdd:COG0651   118 AGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLa 197

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  94 ---------AITLTMMALALKVGLAPMHFWMPP-----------VMQGLDLTTGL--IMSTWQKLAPFALIIQVAPsmhp 151
Cdd:COG0651   198 eldpglllaAFALLLVGFGIKAALFPLHFWLPDaypaapspvsaLLSGLLTKVGVyaILRVLTLLFGADPALFLGT---- 273

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 152 qLLTMLGLLSVFIGGWGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILALITYII----MTSATFLT----FKLLH 223
Cdd:COG0651   274 -LLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLnhalAKALLFLAagaiERATG 352

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2206977007 224 STKINTLNMNWTKTPAITTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFYLRLCYSMA 301
Cdd:COG0651   353 TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
ND2 MTH00198
NADH dehydrogenase subunit 2; Provisional
 13-238 6.44e-13

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214454 [Multi-domain]  Cd Length: 607  Bit Score: 69.50  E-value: 6.44e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  13 LGLGTTLTFMSSHWLLAWMGLEINTLAILPLMTQHHHPRAV---------EATTKYFLAQAAAAATILFA---------- 73
Cdd:MTH00198  197 VGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGcalyfgftgn 276

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  74 ----STINAWTMGEWNIHCLTHPIAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVApsM 149
Cdd:MTH00198  277 egmlGTILSATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSLV--I 354

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 150 HPQLLTMLGLLSVFIGGWGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILALITYIImtsaTFLTFKLLHSTKINT 229
Cdd:MTH00198  355 TSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAV----TYLVSALASFTVICT 430


                  ....*....
gi 2206977007 230 LNMNWTKTP 238
Cdd:MTH00198  431 LEEFGTRTP 439
NDH_I_M TIGR01972
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ...
 99-298 5.15e-09

proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273903 [Multi-domain]  Cd Length: 481  Bit Score: 57.26  E-value: 5.15e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  99 MMALALKVGLAPMHFWMPPVM-QGLDLTTGLIMSTWQKLAPFALI---IQVAPSMHPQ---LLTMLGLLSVFIGGWGGLN 171
Cdd:TIGR01972 210 FIAFAVKVPLFPLHTWLPDAHvEAPTAGSVILAGVLLKMGTYGFLrfnLPLFPDASLYfapVLAALGVIAIIYGALIALA 289

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 172 QTQLRKILAYSSIAHLGWMIV-IVQFKPQLTILALITYI---IMTSATFL----TFKLLHSTKINTLNMNWTKTPAITTI 243
Cdd:TIGR01972 290 QTDIKRLIAYSSISHMGFVLLgIFSFNELGISGAVFQMIshgLITAALFLlvgvLYERAHTRDIAKYGGLANKMPVLAAF 369

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2206977007 244 ATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLT---ATTMALSALLSLYFYLRLCY 298
Cdd:TIGR01972 370 FMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAflaALGIVLAAAYMLTLYKRVFF 427
PRK08376 PRK08376
putative monovalent cation/H+ antiporter subunit D; Reviewed
 33-300 8.48e-08

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236252 [Multi-domain]  Cd Length: 521  Bit Score: 53.56  E-value: 8.48e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  33 LEINTLAILPLMTQHHH-PRAVEATTKYFLAQAAAAATILFASTI-----NAWTMGEWNIHCLTHP-----IAITLTMMA 101
Cdd:PRK08376  150 LEIMSIASYALVAFRNDtWEAIEAGIKYMFVGSLASSMVLLGIALlygqyGTLNMAYLAVKMSENPtvvakIALALFIAG 229

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 102 LALKVGLAPMHFWMPPV--MQGLDLTTGLIMSTWQKLAPFALII------QVAPSMHPQLLTMLGLLSVFIGGWGGLNQT 173
Cdd:PRK08376  230 LAMKSGAVPVHMWLPDAypAAPSSISAMLLVIKQAGLYALARVLfsiygpAINLATVGWVIIILGCLTMFVGVAMAVVQK 309

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 174 QLRKILAYSSIAHLGWMI------VIVQFKPQLT----------ILALITYIIMTSATFLTF-KLLHSTKINTLNM--NW 234
Cdd:PRK08376  310 DVKRLLAYHSVSQIGYMLlglgvgLAALGDPAMAsygeialaggIYHIVNHALYKALLFLTAgAVIYETGTRNLNElgGL 389

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2206977007 235 TKTPAITTIATLTLLSLGG-LPPLTGFMPKWLILQELATQNLPLTATTMALSAlLSLYFYLRLCYSM 300
Cdd:PRK08376  390 ARTMPKTTIAFLIGAAAIVgLPPFNGFASKWLIYESSALFNPILGVIAMIGSV-LTLASFVKVFHTA 455
PRK08375 PRK08375
putative monovalent cation/H+ antiporter subunit D; Reviewed
 33-298 8.84e-08

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236251 [Multi-domain]  Cd Length: 487  Bit Score: 53.34  E-value: 8.84e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  33 LEINTLAILPLMTQHHHPRAVEATTKYFLAQAAAAATILFASTINAWTMGEWNIHCLT------HPIAITLTMM--ALAL 104
Cdd:PRK08375  135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAgalaenPTVVTAFGFVllALAL 214

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 105 KVGLAPMHFWMPPVMQGL-DLTTGLIMSTWQKLAPFALI----------IQVAPSMHPqLLTMLGLLSVFIGGWGGLNQT 173
Cdd:PRK08375  215 KAAVFPLHTWLPRAYPAApPVVTALLSGLVTKVAVYALIriyftvfggdFRFALGLGW-LLAVLALLSMLVGSLAALGQD 293

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 174 QLRKILAYSSIAHLGWMIVIVQFKPQLTILALITYI----IMTSATFLT----FKLLHSTKINTLNMNWTKTPAITTIAT 245
Cdd:PRK08375  294 DVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLlhhaLMKGALFLAagaiEVTYGTRRLSELSGLGRRMPLTAAAFA 373

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2206977007 246 LTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFYLRLCY 298
Cdd:PRK08375  374 VASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
NADH_dehy_S2_C pfam06444
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ...
 291-327 1.29e-07

NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.


Pssm-ID: 461914 [Multi-domain]  Cd Length: 51  Bit Score: 47.64  E-value: 1.29e-07
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 2206977007 291 YFYLRLCYSMALTTSPNTNNSLTPWRLNNTQNMIPLA 327
Cdd:pfam06444   1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLP 37
PRK12667 PRK12667
putative monovalent cation/H+ antiporter subunit D; Reviewed
 93-300 6.58e-07

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237167 [Multi-domain]  Cd Length: 520  Bit Score: 50.74  E-value: 6.58e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  93 IAITLTMMALALKVGLAPMHFWMP--------PV---MQGLDLTTG---------LIMSTWQKLAPFALIIQVapsmhpq 152
Cdd:PRK12667  224 VALALALWAFTIKAAIFPNHFWLPdahpaapsPVsamLSGLVVNVGayaiirflyTIFGISPSLIDFRAALSP------- 296

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 153 LLTMLGLLSVFIGGWGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILALITYII----------MTSATFLtfKLL 222
Cdd:PRK12667  297 ILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIInhaiaksllfLASGVFI--HAA 374

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2206977007 223 HSTKINTLNMNWTKTPAITTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFYLRLCYSM 300
Cdd:PRK12667  375 GTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSL 452
PRK08668 PRK08668
NADH dehydrogenase subunit M; Validated
 4-298 3.99e-06

NADH dehydrogenase subunit M; Validated


Pssm-ID: 236332 [Multi-domain]  Cd Length: 610  Bit Score: 48.45  E-value: 3.99e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007   4 YVLMILMSSLGLgttltFMSSHWLLAWMGLEINTLAILpLMTQHHHPRAVEATTKYFLAQAAAAATILFASTINAWTMGE 83
Cdd:PRK08668  103 FALMSLAGVLGV-----FLANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGT 176

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  84 WNIH-CLTHPIAITLTMMALAL----------KVGLAPMHFWMPPVMQGLDLTTGLIMS-TWQKLAPFALIIQVAPSMHP 151
Cdd:PRK08668  177 FDFAdISQGLINDTSTGFALIVflfllafgvaKAGIFPLHVWAPDAYSEAPQSFSAVLSgQLSKLGAYGFLLVLYVLPGT 256

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 152 QLLT----------------MLGLLSVFIGGWGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILALITYII----M 211
Cdd:PRK08668  257 KLFSefgtyrgvplfnyilaWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFnhalF 336

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 212 TSATFLTFKLL----HSTKINTLNMNWTKTPAITTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSAL 287
Cdd:PRK08668  337 KGLFFLIFAAViyrtGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSI 416

                         330
                  ....*....|.
gi 2206977007 288 LSLYFYLRLCY 298
Cdd:PRK08668  417 GSFLYVFRPLA 427
ND5 MTH00032
NADH dehydrogenase subunit 5; Provisional
 111-268 9.16e-06

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214407 [Multi-domain]  Cd Length: 669  Bit Score: 47.26  E-value: 9.16e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 111 MHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVAPSMHPQLLTML-----GLLSVFIGGWGGLNQTQLRKILAYSSIA 185
Cdd:MTH00032  244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLiitifGALTAFFAATVGLVQNDLKKVIAYSTCS 323

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 186 HLGWMIVIVQFK--PQLTILALITYIIMTSATFLTF-KLLHSTKINTLNMNWT-----KTPAITTIATLTLLSLGGLPPL 257
Cdd:MTH00032  324 QLGYMVLIIGIEgsHNVGLFHLVNHAFFKALLFLSAgSVIHSTTVDEQDMRKMgglihSIPFTYTMMLIGSFSIMGLPYL 403

                         170
                  ....*....|.
gi 2206977007 258 TGFMPKWLILQ 268
Cdd:MTH00032  404 TGFYSKDLILE 414
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
 111-193 1.02e-05

NADH dehydrogenase subunit 5; Reviewed


Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 47.38  E-value: 1.02e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 111 MHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVAP-----SMHPQLLTMLGLLSVFIGGWGGLNQTQLRKILAYSSIA 185
Cdd:MTH00020  229 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPlfeqaPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCS 308


                  ....*...
gi 2206977007 186 HLGWMIVI 193
Cdd:MTH00020  309 QLGYMVVA 316
PRK12644 PRK12644
putative monovalent cation/H+ antiporter subunit A; Reviewed
 92-194 1.75e-05

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237154 [Multi-domain]  Cd Length: 965  Bit Score: 46.46  E-value: 1.75e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  92 PIAITLTMMALALKVGLAPMHFWMPPVMQ-----------------GLDLTTglimstwqKLAP-FAliiqVAPSMHPQL 153
Cdd:PRK12644  203 SVAVVLILVGALSKSAIVPFHFWLPGAMAaptpvsaylhaaamvkaGIYLVA--------RLAPgFA----DVPVWRPTV 270

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 2206977007 154 LTmLGLLSVFIGGWGGLNQTQLRKILAYSSIAHLGWMIVIV 194
Cdd:PRK12644  271 LV-LGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLV 310
PRK06458 PRK06458
hydrogenase 4 subunit F; Validated
 19-192 3.84e-05

hydrogenase 4 subunit F; Validated


Pssm-ID: 235805 [Multi-domain]  Cd Length: 490  Bit Score: 45.31  E-value: 3.84e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  19 LTFMSSHWLLAWMGLEINTLAILPLMTQHHHPRAVEATTKYFLA-----QAAAAATILF---ASTINA-------WTmge 83
Cdd:PRK06458  123 LALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIIcsvgvAFALFGTILVyanAATVMGdgemailWT--- 199

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  84 wniHCLTHPIAITLTMMALAL---------KVGLAPMHFWMP-----------PVMQGLDLTTGLIMstwqkLAPFALII 143
Cdd:PRK06458  200 ---ELLKHASLLDPTLMKLAFvflligfgtKVGLFPMHAWLPdahseapspvsALLSGVLLNVALYA-----VLRYYILI 271

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2206977007 144 QVAPSMHP--QLLTMLGLLSVFIGGWGGLNQTQLRKILAYSSIAHLGWMIV 192
Cdd:PRK06458  272 DAAIGSDFpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAF 322
ND5 MTH00210
NADH dehydrogenase subunit 5; Provisional
 111-193 9.18e-05

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177253 [Multi-domain]  Cd Length: 616  Bit Score: 44.23  E-value: 9.18e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 111 MHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVAP-----SMHPQLLTMLGLLSVFIGGWGGLNQTQLRKILAYSSIA 185
Cdd:MTH00210  230 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPlfegsPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCS 309


                  ....*...
gi 2206977007 186 HLGWMIVI 193
Cdd:MTH00210  310 QLGYMVMV 317
ndhB CHL00049
NADH dehydrogenase subunit 2
 93-296 2.41e-04

NADH dehydrogenase subunit 2


Pssm-ID: 176990 [Multi-domain]  Cd Length: 494  Bit Score: 42.68  E-value: 2.41e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  93 IAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQ----VAPSMHPQ---LLTMLGLLSVFIG 165
Cdd:CHL00049  215 IALIFITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRifdiPFYFSSNEwhlLLEILAILSMILG 294

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 166 GWGGLNQTQLRKILAYSSIAHLGW-MIVIVQFKPQLTILALITY----IIMTSATFLTFkLLHSTKINTLNMN-----WT 235
Cdd:CHL00049  295 NLIAITQTSMKRMLAYSSIGQIGYvIIGIIVGDSNDGYASMITYmlfyIFMNLGTFACI-VLFGLRTGTDNIRdyaglYT 373

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2206977007 236 KTPAITTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFYLRL 296
Cdd:CHL00049  374 KDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKI 434
NuoM COG1008
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ...
 99-298 3.48e-04

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440632 [Multi-domain]  Cd Length: 488  Bit Score: 42.38  E-value: 3.48e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  99 MMALALKVGLAPMHFWMPPV-MQGLDLTTGLIMSTWQKLAPFALI---IQVAPSMHPQLLTM---LGLLSVFIGGWGGLN 171
Cdd:COG1008   216 FIAFAVKVPMFPFHTWLPDAhVEAPTAGSVLLAGVLLKMGGYGLLrfaLPLFPEASAYFAPLlaaLGVIGIIYGALVALA 295

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 172 QTQLRKILAYSSIAHLGWMIV-IVQFKPQ-LT--ILALITYIIMTSATFLTFKLL----HSTKINTLNMNWTKTPAITTI 243
Cdd:COG1008   296 QTDLKRLIAYSSVSHMGFVLLgIFALNPLgLQgaVLQMVSHGLITAALFLLVGVLydrtHTRDIADLGGLAKRMPVLAAL 375

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2206977007 244 ATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLT---ATTMALSALLSLYFYLRLCY 298
Cdd:COG1008   376 FLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAilaALGLILTAAYLLWMYQRVFF 433
PRK02504 PRK02504
NAD(P)H-quinone oxidoreductase subunit N;
93-263 6.13e-04

NAD(P)H-quinone oxidoreductase subunit N;


Pssm-ID: 235044 [Multi-domain]  Cd Length: 513  Bit Score: 41.58  E-value: 6.13e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  93 IAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQ----VAPSMHPQ---LLTMLGLLSVFIG 165
Cdd:PRK02504  211 LALVFVIAGIAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALAIRllvtAFPSFDEQwklLFTALAILSMVLG 290

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 166 GWGGLNQTQLRKILAYSSIAHLGW-MIVIV---QFKPQLTILALITYIIMTSATFLTFKLLH----STKINTLNMNWTKT 237
Cdd:PRK02504  291 NVVALAQTSMKRMLAYSSIGQAGFvMIGLVagtEAGYASMVFYLLAYLFMNLGAFACVILFSlrtgTDQISDYAGLYQKD 370

                         170       180
                  ....*....|....*....|....*.
gi 2206977007 238 PAITTIATLTLLSLGGLPPLTGFMPK 263
Cdd:PRK02504  371 PLLTLGLSLCLLSLGGIPPLAGFFGK 396
PRK07376 PRK07376
NADH-quinone oxidoreductase subunit L;
110-191 1.26e-03

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236005 [Multi-domain]  Cd Length: 673  Bit Score: 40.78  E-value: 1.26e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 110 PMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVAP--SMHPQLLTML---GLLSVFIGGWGGLNQTQLRKILAYSSI 184
Cdd:PRK07376  245 PLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPvfEQFPAVMTVIawtGAITAFLGASIALTQNDIKKGLAYSTI 324


                  ....*..
gi 2206977007 185 AHLGWMI 191
Cdd:PRK07376  325 SQLGYMV 331
PRK12662 PRK12662
putative monovalent cation/H+ antiporter subunit D; Reviewed
 154-310 2.19e-03

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 183662 [Multi-domain]  Cd Length: 492  Bit Score: 39.72  E-value: 2.19e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 154 LTMLGLLSVFIGGWGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILALITYII----MTSATFLTFKLLH----ST 225
Cdd:PRK12662  282 FMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVnhsiVKSALFMVSGSISyhfgTT 361

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 226 KINTLNMNWTKTPAITTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMALSALLSLYFYLRLCYSMALTTS 305
Cdd:PRK12662  362 KLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKIVEALYFESR 441


                  ....*
gi 2206977007 306 PNTNN 310
Cdd:PRK12662  442 MVESK 446
PRK07234 PRK07234
putative monovalent cation/H+ antiporter subunit D; Reviewed
 6-288 2.90e-03

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235978 [Multi-domain]  Cd Length: 470  Bit Score: 39.16  E-value: 2.90e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007   6 LMILMSSLGLgttlTFMSSHWLLAWMGLEINTLAILPLMTQHHHPRAVEATTKYFLAQAAAAATILFASTINAWTMGEWN 85
Cdd:PRK07234  100 LLILHGSVNA----AFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFA 175

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  86 IHCLTH--PIAITLTMMALALKVGLAPMHFWMPPVMQGLDLTTGLIMS-TWQKLAPFALI-IQVAPSMHPQLLTMLGLLS 161
Cdd:PRK07234  176 FSGLATadPEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSgVVVKAGVFPLVrCALDVPGLDLIVRIFGVGT 255

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 162 VFIGGWGGLNQTQLRKILAYSSIAHLGWMIVivqfKPQLTILALITYIIMTSATFLTFKLLHSTKINtlnmNWTKTPAIT 241
Cdd:PRK07234  256 ALLGVLFALLEKDLKRMLAFSTISQLGFILA----APLVGGLYALAHGLVKSTLFLCAGALPSRNFT----ELISQMLGI 327

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 2206977007 242 TIATLTLLSLGGLP---PLTGFMPKWLILQELatqnLPLTATTMALSALL 288
Cdd:PRK07234  328 GKWIPLTMASFSIAgfpLLAGFVSKVLTLKNL----LPWQAIALNLAAVG 373
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
 153-192 2.91e-03

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 39.37  E-value: 2.91e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 2206977007 153 LLTMLGLLSVFIGGWGGLNQTQLRKILAYSSIAHLGWMIV 192
Cdd:COG1009   277 VVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFL 316
PRK07363 PRK07363
NADH-quinone oxidoreductase subunit M;
90-210 4.31e-03

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 180945 [Multi-domain]  Cd Length: 501  Bit Score: 38.92  E-value: 4.31e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  90 THPIAITLTMMALALKVGLAPMHFWMPPV-MQGLDLTTGLIMSTWQKLAPFALI---IQVAP---SMHPQLLTMLGLLSV 162
Cdd:PRK07363  203 TQLILLTGLLLGFGIKIPLVPLHTWLPDAyTEASPAVAILLGGVLAKLGTYGLLrfgLQLFPqtwSLVAPGLAIIGTISV 282

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2206977007 163 FIGGWGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILALITYII 210
Cdd:PRK07363  283 IYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMI 330
PRK12650 PRK12650
DUF4040 family protein;
89-191 6.63e-03

DUF4040 family protein;


Pssm-ID: 237158 [Multi-domain]  Cd Length: 962  Bit Score: 38.49  E-value: 6.63e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  89 LTHPIAITLTMMALAlKVGLAPMHFWMPPVMQGLDLTTGLIMSTWQKLAPFALIIQVAPSMHPQ-----LLTMLGLLSVF 163
Cdd:PRK12650  206 LTTVVAVLIAVAAFT-KSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVavwnwLLIIVGMITAL 284

                          90       100
                  ....*....|....*....|....*...
gi 2206977007 164 IGGWGGLNQTQLRKILAYSSIAHLGWMI 191
Cdd:PRK12650  285 MGAVFAVQKTDLKKLTAYSTVSQLGWIV 312
PRK06591 PRK06591
putative monovalent cation/H+ antiporter subunit D; Reviewed
 33-309 7.64e-03

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235837 [Multi-domain]  Cd Length: 432  Bit Score: 37.84  E-value: 7.64e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  33 LEINTLAILPLMTQHHHPRAVEATTKYFLAQAAAAATILFASTINAWTMGEWNI-----------HCLTHPIAITLTMMA 101
Cdd:PRK06591  144 IEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMtdiaaylqehtNSRIITIAIGFFLIG 223

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 102 LALKVGLAPMHFWMppvMQGLDLTTGLIMSTwqkLAPFALIIQV---------------APSMHPQLLTMLGLLSVFIGG 166
Cdd:PRK06591  224 AILKTAFFPMHFWM---MRAYNNTASVILVY---LAGISTIIGIyiiykftyiiigyetIKTAITNFIRPIALATLIIAP 297

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 167 WGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILA--LITYIIMTSATFLtfkllhstkINTLNMNWTKTP--AITT 242
Cdd:PRK06591  298 YFAYQAKNFKNIIIYSCFTQIGYVFLLYVTENGIIILPslLLADSINKIALFL---------IDAYNESYKREPnkVLII 368

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2206977007 243 IATLTLLSLGGLPpltGFMPKWLILQELATQNLPLTATTMALSALLSLYFYLRLCYSMALTTSPNTN 309
Cdd:PRK06591  369 IAIICSCGLPISP---LFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYKMVLLLFPTKQESHS 432
PRK07691 PRK07691
putative monovalent cation/H+ antiporter subunit D; Reviewed
 97-210 8.07e-03

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 181085 [Multi-domain]  Cd Length: 496  Bit Score: 38.01  E-value: 8.07e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  97 LTMMALALKVGLAPMHFWMP-----PVMQGLDLTTGL--------IMSTwqklapFALIIQVAPSMHPQLLTMLGLLSVF 163
Cdd:PRK07691  214 LFLFVFATKAGLFPLYFWLPgsyyaPPIAIAALFGALltkvgvyaIART------FTLFFSHDTSFTHYLILILALLTII 287

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 2206977007 164 IGGWGGLNQTQLRKILAYSSIAHLGWMIVIVQFKPQLTILALITYII 210
Cdd:PRK07691  288 FGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLI 334
PRK06589 PRK06589
putative monovalent cation/H+ antiporter subunit D; Reviewed
 93-309 9.56e-03

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235835 [Multi-domain]  Cd Length: 489  Bit Score: 37.87  E-value: 9.56e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007  93 IAITLTMMALALKVGLAPMHFWMPPVMQG-----------LDLTTGLIMSTWQKLAPFALIIQVAPSMHPQLLTMLGLLS 161
Cdd:PRK06589  211 IILLLMFIYGIAKTAIFPVHSWLPAAMVAhypvsallhavIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLIFIPIVS 290

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 162 VFIGGWGGLNQTQLRKILAYSSIAHLGWMI----VIVQFKPQLTILALITYIIMTSATFLTFKLLHSTK----INTLNMN 233
Cdd:PRK06589  291 IFYSSLKALKTDNIKKILAYSTISQLSLALlsafILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKkedqVDKLHGT 370

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2206977007 234 WTKTPAITTIATLTLLSLGGLPPLTGFMPKWLILQELATQNLPLTATTMAL-----SALLSLYFYLRLCYSMALTTSPNT 308
Cdd:PRK06589  371 SKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLvviasSILSALYLLKILSSIYKPSLSENS 450


                  .
gi 2206977007 309 N 309
Cdd:PRK06589  451 F 451
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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