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Conserved domains on  [gi|2222306107|ref|YP_010338980|]
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ATP synthase F0 subunit 6 (mitochondrion) [Sahlingia subintegra]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 23-253 1.30e-50

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


:

Pssm-ID: 273458  Cd Length: 226  Bit Score: 165.07  E-value: 1.30e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  23 PFTTFIGYNLCINNASIFLLLSAVTAFSFCYISYYENCIIPNRWQFVFESLYGVVLSMVAENIGQKGEKYLPLIFTLFFL 102
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLSLILLLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 103 LLFCNVIGMIPYAFTVTSHIAFTFGLAFSLYIGINVIGIRTHGFQFLSVFLPKGVPFFIIPILVVIELISYVIKVFTLAI 182
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2222306107 183 RLFANMTSGHTLLKIIASFGWKISSLGGFlsifqLIPLAIIFGLSGLELGIAVLQAYVFALLTCIYLNDVL 253
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSLMSSAIF-----ALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
 
Name Accession Description Interval E-value
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 23-253 1.30e-50

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 165.07  E-value: 1.30e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  23 PFTTFIGYNLCINNASIFLLLSAVTAFSFCYISYYENCIIPNRWQFVFESLYGVVLSMVAENIGQKGEKYLPLIFTLFFL 102
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLSLILLLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 103 LLFCNVIGMIPYAFTVTSHIAFTFGLAFSLYIGINVIGIRTHGFQFLSVFLPKGVPFFIIPILVVIELISYVIKVFTLAI 182
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2222306107 183 RLFANMTSGHTLLKIIASFGWKISSLGGFlsifqLIPLAIIFGLSGLELGIAVLQAYVFALLTCIYLNDVL 253
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSLMSSAIF-----ALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 14-256 2.72e-46

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 154.78  E-value: 2.72e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  14 EQFEIIYYLPFTTFIGYNLCINNASIFLLLSAVTAFsfcYISYYENCIIPNRWQFVFESLYGVVLSMVAENIGQKGEKYL 93
Cdd:MTH00175    7 DQFNIIRLITIQAFLGDWLVTFTNSSMMMVLAVIIF---WLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYF 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  94 PLIFTLFFLLLFCNVIGMIPYAFTVTSHIAFTFGLAFSLYIGINVIGIRTHGFQFLSVFLPKGVPFFIIPILVVIELISY 173
Cdd:MTH00175   84 PFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSY 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 174 VIKVFTLAIRLFANMTSGHTLLKIIASFGWKISSLGgfLSIFQLIPLAIIFGLSGLELGIAVLQAYVFALLTCIYLNDVL 253
Cdd:MTH00175  164 LIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNG--LIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDTI 241


                  ...
gi 2222306107 254 DMH 256
Cdd:MTH00175  242 ALH 244
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 106-250 1.32e-41

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 139.84  E-value: 1.32e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 106 CNVIGMIPYAFTVTSHIAFTFGLAFSLYIGINVIGIRTHGFQFLSVFLPKGVPFFIIPILVVIELISYVIKVFTLAIRLF 185
Cdd:cd00310    18 SNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIRPLSLSVRLF 97

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2222306107 186 ANMTSGHTLLKIIASFGWKisslggFLSIFQLIPLAIIFGLSGLELGIAVLQAYVFALLTCIYLN 250
Cdd:cd00310    98 ANMFAGHLLLALLSGLVPS------LLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
41-250 3.88e-41

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 140.32  E-value: 3.88e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  41 LLLSAVTAFSFCYISYYENCIIPNRWQFVFESLYGVVLSMVAENIGQK-GEKYLPLIFTLFFLLLFCNVIGMI---PYAF 116
Cdd:pfam00119   5 LIVALILLLFLLLATRKTKKLVPGRLQNFVEMLVEFVDNIVKDNIGKKkGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 117 TVTSHIAFTFGLAFSLYIGINVIGIRTHGF-QFLSVFLPKGVPFFIIPILVVIELISYVIKVFTLAIRLFANMTSGHTLL 195
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHGLgGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2222306107 196 KIIASFGWKISSLGGFLSIfqlIPLAIIFGLSGLELGIAVLQAYVFALLTCIYLN 250
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGV---IPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 36-254 9.82e-40

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 136.74  E-value: 9.82e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  36 NASIFLLLSAVTAFSFCYISYYENCIIPNRWQFVFESLYGVVLSMVAENIGQKGEKYLPLIFTLFFLLLFCNVIGMIPYA 115
Cdd:COG0356     1 DTVLMSWLAMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 116 FTVTSHIAFTFGLAFSLYIGINVIGIRTHGF-QFLSVFLPKGVPfFIIPILVVIELISYVIKVFTLAIRLFANMTSGHTL 194
Cdd:COG0356    81 FPPTADINVTLALALIVFVLVHYYGIKKKGLgGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAGHII 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 195 LKIIASFgwkisslgGFLSIFQLIPLAIIFGLSGLELGIAVLQAYVFALLTCIYLNDVLD 254
Cdd:COG0356   160 LLLLAGL--------APFLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISLAVE 211
 
Name Accession Description Interval E-value
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 23-253 1.30e-50

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 165.07  E-value: 1.30e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  23 PFTTFIGYNLCINNASIFLLLSAVTAFSFCYISYYENCIIPNRWQFVFESLYGVVLSMVAENIGQKGEKYLPLIFTLFFL 102
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLSLILLLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 103 LLFCNVIGMIPYAFTVTSHIAFTFGLAFSLYIGINVIGIRTHGFQFLSVFLPKGVPFFIIPILVVIELISYVIKVFTLAI 182
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2222306107 183 RLFANMTSGHTLLKIIASFGWKISSLGGFlsifqLIPLAIIFGLSGLELGIAVLQAYVFALLTCIYLNDVL 253
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSLMSSAIF-----ALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 14-256 2.72e-46

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 154.78  E-value: 2.72e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  14 EQFEIIYYLPFTTFIGYNLCINNASIFLLLSAVTAFsfcYISYYENCIIPNRWQFVFESLYGVVLSMVAENIGQKGEKYL 93
Cdd:MTH00175    7 DQFNIIRLITIQAFLGDWLVTFTNSSMMMVLAVIIF---WLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYF 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  94 PLIFTLFFLLLFCNVIGMIPYAFTVTSHIAFTFGLAFSLYIGINVIGIRTHGFQFLSVFLPKGVPFFIIPILVVIELISY 173
Cdd:MTH00175   84 PFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSY 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 174 VIKVFTLAIRLFANMTSGHTLLKIIASFGWKISSLGgfLSIFQLIPLAIIFGLSGLELGIAVLQAYVFALLTCIYLNDVL 253
Cdd:MTH00175  164 LIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNG--LIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDTI 241


                  ...
gi 2222306107 254 DMH 256
Cdd:MTH00175  242 ALH 244
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 34-256 1.20e-42

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 144.80  E-value: 1.20e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  34 INNASIFLLLSAVTAFsfcyISYYENCIIPNRWQFVFESLYGVVLSMVAENIGQKGEKYLPLIFTLFFLLLFCNVIGMIP 113
Cdd:MTH00172   17 LTNSSIMMILVIIVVL----LLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFIISLFFFIVFLNLLGLFP 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 114 YAFTVTSHIAFTFGLAFSLYIGINVIGIRTHGFQFLSVFLPKGVPFFIIPILVVIELISYVIKVFTLAIRLFANMTSGHT 193
Cdd:MTH00172   93 YVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHL 172

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2222306107 194 LLKIIASFGWKISSLGGFLSIFqliPLAIIFGLSGLELGIAVLQAYVFALLTCIYLNDVLDMH 256
Cdd:MTH00172  173 LFAILAGFGFNMLCASGFLSLF---PLLIMVFITLLEIAVAVIQAYVFCLLTTIYLADTIVLH 232
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 106-250 1.32e-41

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 139.84  E-value: 1.32e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 106 CNVIGMIPYAFTVTSHIAFTFGLAFSLYIGINVIGIRTHGFQFLSVFLPKGVPFFIIPILVVIELISYVIKVFTLAIRLF 185
Cdd:cd00310    18 SNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIRPLSLSVRLF 97

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2222306107 186 ANMTSGHTLLKIIASFGWKisslggFLSIFQLIPLAIIFGLSGLELGIAVLQAYVFALLTCIYLN 250
Cdd:cd00310    98 ANMFAGHLLLALLSGLVPS------LLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
41-250 3.88e-41

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 140.32  E-value: 3.88e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  41 LLLSAVTAFSFCYISYYENCIIPNRWQFVFESLYGVVLSMVAENIGQK-GEKYLPLIFTLFFLLLFCNVIGMI---PYAF 116
Cdd:pfam00119   5 LIVALILLLFLLLATRKTKKLVPGRLQNFVEMLVEFVDNIVKDNIGKKkGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 117 TVTSHIAFTFGLAFSLYIGINVIGIRTHGF-QFLSVFLPKGVPFFIIPILVVIELISYVIKVFTLAIRLFANMTSGHTLL 195
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHGLgGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2222306107 196 KIIASFGWKISSLGGFLSIfqlIPLAIIFGLSGLELGIAVLQAYVFALLTCIYLN 250
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGV---IPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 36-254 9.82e-40

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 136.74  E-value: 9.82e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  36 NASIFLLLSAVTAFSFCYISYYENCIIPNRWQFVFESLYGVVLSMVAENIGQKGEKYLPLIFTLFFLLLFCNVIGMIPYA 115
Cdd:COG0356     1 DTVLMSWLAMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 116 FTVTSHIAFTFGLAFSLYIGINVIGIRTHGF-QFLSVFLPKGVPfFIIPILVVIELISYVIKVFTLAIRLFANMTSGHTL 194
Cdd:COG0356    81 FPPTADINVTLALALIVFVLVHYYGIKKKGLgGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAGHII 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 195 LKIIASFgwkisslgGFLSIFQLIPLAIIFGLSGLELGIAVLQAYVFALLTCIYLNDVLD 254
Cdd:COG0356   160 LLLLAGL--------APFLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISLAVE 211
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 26-256 2.14e-37

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 131.07  E-value: 2.14e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  26 TFIGYNLCINNASIFLLLSAVTAFSFCYISYYENCIIPNRWQFVFESLYGVVLSMVAENIGQKGEKYLPLIFTLFFLLLF 105
Cdd:PRK05815    6 IIGFGGFNFDSLLLSVLLGVLILLLFALVATRKLSGVPGGLQNFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLFLFILL 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 106 CNVIGMIP-YAFTVTSHIAFTFGLAFSLYIGINVIGIRTHGF-QFLSVFLPKgvpffIIPILVVIELISYVIKVFTLAIR 183
Cdd:PRK05815   86 MNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGIKKKGLgGYLKEFYLQ-----PHPLLLPIEIISEFSRPISLSLR 160

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2222306107 184 LFANMTSGHTLLKIIASFgwkisslGGFLSIFQLIPLAIIFGLSGLELGIAVLQAYVFALLTCIYLNDVLDMH 256
Cdd:PRK05815  161 LFGNMLAGELILALIALL-------GGAGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYISMAVEEE 226
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 2-256 1.34e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 116.96  E-value: 1.34e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107   2 MISNFFLFHSPLEQFEIIYYLPFTTFIGYNLCINNaSIFLLLSAVTAFSFCYISYYENCIIPNRWQFVFESLYGVVLSMV 81
Cdd:MTH00174    1 MVAAYFDQFNIIPIFSIWVYFLSFWINGEFFCFTN-TFFMMSFAVFLFYTIGAKGNNNTLVPNRILVGLELIYSHFYTVL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  82 AENIGQKGEKYLPLIFTLFFLLLFCNVIGMIPYAFTVTSHIAFTFGLAFSLYIGINVIGIRTHGFQFLSVFLPKGVPFFI 161
Cdd:MTH00174   80 KDNLGNKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLAL 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 162 IPILVVIELISYVIKVFTLAIRLFANMTSGHTLLKIIASFGWKISSLGGFLSIFqlIPLAIIFGLSGLELGIAVLQAYVF 241
Cdd:MTH00174  160 APLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIGSF--VPFAILIFVTILEMAVAIIQAYVF 237

                         250
                  ....*....|....*
gi 2222306107 242 ALLTCIYLNDVLDMH 256
Cdd:MTH00174  238 TLLTIVYLRDTVELH 252
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 31-252 4.01e-28

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 106.79  E-value: 4.01e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  31 NLCINNASIFLLLSavtafsFCYISYYencIIPNRWQFVFESLYGVVLSMVAENIGQKGEKYLPLIFTLFFLLLFCNVIG 110
Cdd:MTH00157   16 NLSLNWLSTFLGLL------FIPSSFW---LIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILFNNFLG 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 111 MIPYAFTVTSHIAFTFGLAFSLYIGINVIGIRTHGFQFLSVFLPKGVPFFIIPILVVIELISYVIKVFTLAIRLFANMTS 190
Cdd:MTH00157   87 LFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIA 166

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2222306107 191 GHTLLKIIASFGWKISSLGGFLSIFQLIPLAIifglsgLELGIAVLQAYVFALLTCIYLNDV 252
Cdd:MTH00157  167 GHLLLTLLGNTGPSLSSMILSILILIQILLLI------LESAVAIIQSYVFSVLSTLYSSEV 222
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 42-249 5.79e-28

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 106.60  E-value: 5.79e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  42 LLSAVTAFSFCYISYYENcIIPNRWQFVFESLYGVVLSMVAENIGQKGEKYLPLIFTLFFLLLFCNVIGMIPYAFTVTSH 121
Cdd:MTH00035   23 LLSSVIALSWLFFINPTN-WLPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVFILILSINVLGLFPYAFTSTSH 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 122 IAFTFGLAFSLYIGINVIGIRTHGFQFLSVFLPKGVPFFIIPILVVIELISYVIKVFTLAIRLFANMTSGHTLLKIIASF 201
Cdd:MTH00035  102 ISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLRLAANLTAGHLLIFLLSTA 181

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 2222306107 202 GWKISSlggfLSIFQLIPLAIIFGLSGLELGIAVLQAYVFALLTCIYL 249
Cdd:MTH00035  182 IWELSN----SPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYL 225
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 38-250 5.81e-28

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 106.57  E-value: 5.81e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  38 SIFLLLSAVTAFSFCYISYYeNCIIPNRWQFVFESLYGVVLSMVAENIGQKGEKYLPLIFTLFFLLLFCNVIGMIPYAFT 117
Cdd:MTH00179   16 GIPLLALALLLPWLLFPSLT-NRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFLLTLNLLGLLPYTFT 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 118 VTSHIAFTFGLAFSLYIGINVIGIRTHGFQFLSVFLPKGVPFFIIPILVVIELISYVIKVFTLAIRLFANMTSGHTLLKI 197
Cdd:MTH00179   95 PTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVRLTANITAGHLLMHL 174

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2222306107 198 IASfgwKISSLGGFLSIFQLIPLAIIFGLSGLELGIAVLQAYVFALLTCIYLN 250
Cdd:MTH00179  175 ISS---AVFVLMNFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQ 224
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 62-251 1.00e-26

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 103.11  E-value: 1.00e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  62 IPNRWQFVFESLYGVVLSMVAENIGQKGEKYLPLIFTLFFLLLFCNVIGMIPYAFTVTSHIAFTFGLAFSLYIGINVIGI 141
Cdd:MTH00101   38 INNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGF 117

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 142 RTHGFQFLSVFLPKGVPFFIIPILVVIELISYVIKVFTLAIRLFANMTSGHTLLKIIASFGWKISSLGGFLSifqLIPLA 221
Cdd:MTH00101  118 RNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMSISTTTA---LITFI 194

                         170       180       190
                  ....*....|....*....|....*....|
gi 2222306107 222 IIFGLSGLELGIAVLQAYVFALLTCIYLND 251
Cdd:MTH00101  195 ILILLTILEFAVALIQAYVFTLLVSLYLHD 224
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 107-249 2.14e-25

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 99.95  E-value: 2.14e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 107 NVIGMIPYAFTVTSHIAFTFGLAFSLYIGINVIGIRTHGFQFLSVFLPKGVPFFIIPILVVIELISYVIKVFTLAIRLFA 186
Cdd:MTH00132   84 NMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVRLTA 163

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2222306107 187 NMTSGHTLLKIIASFGWKISSLGGFLSIFQLIplaIIFGLSGLELGIAVLQAYVFALLTCIYL 249
Cdd:MTH00132  164 NLTAGHLLIQLIATAAFVLLPLMPTVAILTAT---LLFLLTLLEVAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 61-253 5.54e-25

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 98.95  E-value: 5.54e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  61 IIPNRWQFVFESLYGVVLSMVAENIGQKGEKYLPLIFTLFFLLLFCNVIGMIPYAFTVTSHIAFTFGLAFSLYIGINVIG 140
Cdd:MTH00176   40 FCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSG 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 141 IRTHGFQFLSVFLPKGVPFFIIPILVVIELISYVIKVFTLAIRLFANMTSGHTLLKIIASFGWKISSLGGFLSIFQLIPL 220
Cdd:MTH00176  120 FINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLAVRLAANLSAGHLLLGLLGAAMWGLLPVSPLIGFLLLIVQ 199

                         170       180       190
                  ....*....|....*....|....*....|...
gi 2222306107 221 AIIFglsGLELGIAVLQAYVFALLTCIYLNDVL 253
Cdd:MTH00176  200 ILYF---MFEIAVCMIQAYVFTLLLSLYLDEHP 229
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 107-249 1.92e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 97.20  E-value: 1.92e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 107 NVIGMIPYAFTVTSHIAFTFGLAFSLYIGINVIGIRTHGFQFLSVFLPKGVPFFIIPILVVIELISYVIKVFTLAIRLFA 186
Cdd:MTH00120   84 NLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTA 163

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2222306107 187 NMTSGHTLLKIIASFGWKISSLGGFLSIfqlIPLAIIFGLSGLELGIAVLQAYVFALLTCIYL 249
Cdd:MTH00120  164 NLTAGHLLIQLISTATLNLLPTMPTLSL---LTLIILLLLTILELAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 24-251 3.29e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 96.86  E-value: 3.29e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  24 FTTFIGYNLCINNASIFLLLSAVTAFSFCYISYYencIIPNRWQFVFESLYGVVLSMVAENIGQKGEKYLPLIFTLFFLL 103
Cdd:MTH00173    6 FSSFDDHNSSFSSLSFLMWLLSLMSLFFFSSSVW---VSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFLFL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 104 LFCNVIGMIPYAFTVTSHIAFTFGLAFSLYIGINVIGIRTHGFQFLSVFLPKGVPFFIIPILVVIELISYVIKVFTLAIR 183
Cdd:MTH00173   83 ISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTVR 162

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2222306107 184 LFANMTSGHTLLKIIASFGWKISSLGGFLSIfqLIPLAIIFGLSGLELGIAVLQAYVFALLTCIYLND 251
Cdd:MTH00173  163 LLANISAGHIVLTLIGNYLSSSLFSSSVVSL--LLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 85-249 3.71e-23

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 93.88  E-value: 3.71e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  85 IGQKGEKYLPLIFTLFFLLLFCNVIGMIPYAFTVTSHIAFTFGLAFSLYIGINVIGIRTHGFQFLSVFLPKGVPFFIIPI 164
Cdd:MTH00073   62 LNTPGHKWALILTSLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPI 141

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 165 LVVIELISYVIKVFTLAIRLFANMTSGHTLLKIIASFGWKISSLGGFLSIFQLIplaIIFGLSGLELGIAVLQAYVFALL 244
Cdd:MTH00073  142 LIIIETISLFIRPLALGVRLTANLTAGHLLIQLISTATLVLLPLMPTVSILTMI---VLFLLTLLEIAVAMIQAYVFVLL 218


                  ....*
gi 2222306107 245 TCIYL 249
Cdd:MTH00073  219 LSLYL 223
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 107-251 9.97e-20

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 84.78  E-value: 9.97e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 107 NVIGMIPYAFTVTSHIAFTFGLAFSLYIGINVIGIRTHGFQFLSVFLPKGVPFFIIPILVVIELISYVIKVFTLAIRLFA 186
Cdd:MTH00005   88 NLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFRLAA 167

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2222306107 187 NMTSGHTLLKIIASFgwkiSSLGGFLSIFQLIPLAII-FGLSGLELGIAVLQAYVFALLTCIYLND 251
Cdd:MTH00005  168 NMSAGHIVLSLIGIY----AASALFSSISSTILLILTqMGYILFEVGICLIQAYIFCLLLSLYSDD 229
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 69-249 4.27e-17

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 79.40  E-value: 4.27e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  69 VFESLYGVVLSMVA-ENIGQKGEKYLPLIFTLFFLLLFCNVIGMIPYAFTVTSHIAFTFGLAFSLYIGINVIGIRTHGFQ 147
Cdd:PRK13419  146 AMEALVEFIRLDVAkSNIGHGYEKFLPYLLTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFITQYAAIKAHGIK 225

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 148 FLSVFLPKGVPFFIIPILVVIELISYVIKVFTLAIRLFANMTSGHTllkIIASFGWKISSLGGF-LSIFQLIPLAIIFGL 226
Cdd:PRK13419  226 GYLAHLTGGTHWSLWIIMIPIEFIGLFTKPFALTVRLFANMTAGHI---VILSLIFISFILKSYiVAVAVSVPFAIFIYL 302

                         170       180
                  ....*....|....*....|...
gi 2222306107 227 sgLELGIAVLQAYVFALLTCIYL 249
Cdd:PRK13419  303 --LELFVAFLQAYIFTMLSALFI 323
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 80-256 1.01e-08

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 54.90  E-value: 1.01e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  80 MVAENIGQKGEKYLPLIFTLFFLLLFCNVIGMIP-----------------------------------YAFTVTSHIAF 124
Cdd:PRK13417  145 IVDESMHGHGHSYYHYIFTLFFFILFCNLMGLVPsvgeltvvasdygglvalgvmdhtphalptfakvwSGITVTGDISV 224

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 125 TFGLAFSLYIGINVIGIRTHGFQFLSVFLPKGVPFFIIPILVVIELI-SYVIKVFTLAIRLFANMTSGHTLLKIIASFGW 203
Cdd:PRK13417  225 TMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVIILALMGFIF 304

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2222306107 204 KISSLGgflsifqLIPLAIIFG--LSGLELGIAVLQAYVFALLTCIYLNDVLDMH 256
Cdd:PRK13417  305 QFQSWG-------IVPVSVIGSglIYVLEIFVAFLQAYIFVLLTSLFVGLSMHRH 352
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 61-249 2.33e-08

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 53.21  E-value: 2.33e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  61 IIPNRWQFVFESLYGVVLSMVAENIGQKGEKYLPLIFTLFFLLLFCNVIGMIPYAFTVTSHIAFTFGLAFSLYIGINVIG 140
Cdd:PRK13420   43 LDPGRFQVALEGVVSTIEDAIKEVLPRHARLVLPFVGTLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFG 122

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 141 IRTHGFQ-FLSVFLpkgVPFfiiPILVVIELISYVIKVFTLAIRLFANMTSghtlLKIIASFgwkISSLGGFLSIFQLIP 219
Cdd:PRK13420  123 IRAEGLReYLKHYL---SPS---PFLLPFHLISEITRTLALAVRLFGNIMS----LELAALL---VLLVAGFLVPVPILM 189

                         170       180       190
                  ....*....|....*....|....*....|
gi 2222306107 220 LAIIfglsglelgIAVLQAYVFALLTCIYL 249
Cdd:PRK13420  190 LHII---------EALVQAYIFGMLALIYI 210
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 61-249 3.26e-07

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 49.69  E-value: 3.26e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107  61 IIPNRWQFVFESLYGVVLSMVAENIGQKGEKYLPLIFTLFFLLLFCNVIGMIPYAFTVTSHIAFTFGLAFSLYIGINVIG 140
Cdd:PRK13421   46 LAPGRLQSVLELVVTTIDAQIRDTMQTDPAPYRALIGTLFLFVLVANWSSLVPGVEPPTAHLETDAALALIVFLATIYYG 125

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 141 IRTHGFQ-FLSVFLPKGvpffiiPILVVIELISYVIKVFTLAIRLFANMTSGHTLLKIIAsfgwkisSLGGFlsifqLIP 219
Cdd:PRK13421  126 VRARGVRgYLATFAEPT------WVMIPLNLVEQLTRTFSLIVRLFGNVMSGVFVIGIVL-------SLAGL-----LVP 187

                         170       180       190
                  ....*....|....*....|....*....|
gi 2222306107 220 LAiifgLSGLELGIAVLQAYVFALLTCIYL 249
Cdd:PRK13421  188 IP----LMALDLLTGAVQAYIFAVLAMVFI 213
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 112-191 5.60e-05

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 42.56  E-value: 5.60e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 112 IPYAFTVTSHIAFTFGLAFSLYIGINVIGIRTHGFQFLSVFLPKGVPFFIIPILVVIELISYVIKVFTLAIRLFANMTSG 191
Cdd:MTH00050   42 LPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLG 121
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 106-250 1.84e-04

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 41.12  E-value: 1.84e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222306107 106 CNVIGMIPYAFTVTSHIAFTFGLAFSLYIGINVIGIRTHgfQFLSVFLPKGVPFFIIP-ILVVIELISYVIKVFTLAIRL 184
Cdd:MTH00087   65 FCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKS--EKFSVYLSKGSDSFLKTfSMLFVEIVSELSRPLALTLRL 142

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2222306107 185 FANMTSGHTLLKIIASFGWKISslggFLSIFQLIplaiifglsgLELGIAVLQAYVFALLTCIYLN 250
Cdd:MTH00087  143 TVNLMVGHLISSLLNFLGEKYV----WLSILAIM----------MECFVAFIQSYIFSRLIYLYLN 194
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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