|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 695.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 1 MLKVLAPTIMLFPTIWLTSPKWLWATTTAQSLLIAMVSLSWLNWTLDTGWTASNTYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 81 SQNHINPEPVNRQRLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 161 LLVALLLLQQSAGTLSMMMLPNTEMTLTNSWGHKIWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 241 GYGMMRIMVALNPLSQQLIYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAH 320
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 321 GLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITALFNWSPWTILLTGLG 400
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2231640575 401 TLITASYSLYMFLTSQRGQVPNHAVNLSPFHTREHLLITLHLIPMVLLIAKPELMWGWC 459
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 678.18 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 1 MLKVLAPTIMLFPTIWLTSPKWLWATTTAQSLLIAMVSLSWLNWTLDTgWTASNTYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSET-MNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 81 SQNHINPEPVNRQRLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00068 80 SQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 161 LLVALLLLQQSAGTLSMMMLPNTEMTLTNSWGHKIWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 241 GYGMMRIMVALNPLSQQLIYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAH 320
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 321 GLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITALFNWSPWTILLTGLG 400
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2231640575 401 TLITASYSLYMFLTSQRGQVPNHAVNLSPFHTREHLLITLHLIPMVLLIAKPELMWGW 458
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 669.60 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 1 MLKVLAPTIMLFPTIWLTSPKWLWATTTAQSLLIAMVSLSWLNWTLDTGwTASNTYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPT-KNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 81 SQNHINPEPVNRQRLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00124 80 SQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 161 LLVALLLLQQSAGTLSMMMLPNTEMTLTNSWGHKIWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 241 GYGMMRIMVALNPLSQQLIYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAH 320
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 321 GLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITALFNWSPWTILLTGLG 400
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2231640575 401 TLITASYSLYMFLTSQRGQVPNHAVNLSPFHTREHLLITLHLIPMVLLIAKPELMWGW 458
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-460 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 640.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 1 MLKVLAPTIMLFPTIWLTSPKWLWATTTAQSLLIAMVSLSWLNWTLDTGWTASNTYlATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLF-FSDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 81 SQNHINPEPVNRQRLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00110 80 SQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 161 LLVALLLLQQSAGTLSMMMLPNTEMTLTNSWGHKIWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 241 GYGMMRIMVALNPLSQQLIYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAH 320
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 321 GLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITALFNWSPWTILLTGLG 400
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 401 TLITASYSLYMFLTSQRGQVPNHAVNLSPFHTREHLLITLHLIPMVLLIAKPELMWGWCY 460
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-455 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 549.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 3 KVLAPTIMLFPTIWLTSPKWLWATTTAQSLLIAMVSLSWLNWTLDTGWTASNTYLATDPLSTPLLVLTCWLLPLMILASQ 82
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 83 NHINPEPVNRQRLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLL 162
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 163 VALLLLQQSAGTLSMMMLPNTEMTltnSWGHKIWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGY 242
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 243 GMMRIMVALNPLSQQLIYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGL 322
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 323 ASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITALFNWSPWTILLTGLGTL 402
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2231640575 403 ITASYSLYMFLTSQRGQVPNHAVNLSPFHTREHLLITLHLIPMVLLIAKPELM 455
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
1.16e-168 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 482.17 E-value: 1.16e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 1 MLKVLAPTIMLFPTIWLTSPKWLWATTTAQSLLIAMVSLSWLNWTLDTGWTASNTYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 81 SQNHINPEPVNRQRLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 161 LLVALLLLQQSAGTLSMMMLPNTEMTLTNSWGHKIWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 241 GYGMMRIMVALN-PLSQQLIYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVA 319
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 320 HGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITALFNWSPWTILLTGL 399
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 2231640575 400 GTLITASYSLYMFLTSQRGQVPNHAVNLSPFHTREHLLITLHLIPMVLLIAKPELM 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNII 456
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
49-459 |
7.52e-135 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 394.59 E-value: 7.52e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 49 GWTASNTYLATDPLSTPLLVLTCWLLPLMILASQNHINPEpvNRQRLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLI 128
Cdd:MTH00150 12 SYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLR--NKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 129 PTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSAGTLSMMMLPNTEMTLTNSWghkIWWAGCLVAFLVKM 208
Cdd:MTH00150 90 PTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLLVFLAFLVKL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 209 PLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMVALNPLSQQLIYPFMILALWGIIMTGLMCLRQTDLKSLIA 288
Cdd:MTH00150 167 PMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 289 YSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANL 368
Cdd:MTH00150 247 YSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINM 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 369 AMPPLPNLMGELMIITALFNWSPWTILLTGLGTLITASYSLYMFLTSQRGQVPNHAVNLSPFHTREHLLITLHLIPMVLL 448
Cdd:MTH00150 327 AAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLL 406
|
410
....*....|.
gi 2231640575 449 IAKPELMWGWC 459
Cdd:MTH00150 407 ILKSDLLFMWI 417
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
2.27e-127 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 376.42 E-value: 2.27e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 1 MLKVLAPTIMLFPTIWLTSPKWLwatttAQSLLIAMVSLSWLNWTLDTGWTASNTYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWL-----VQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 81 SQNHINPepVNRQRLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00163 76 SESVYKK--NNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 161 LLVALLLLQQSAGTLSMMMLPNtemtltNSWGHKIWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00163 154 LLVGIFYLYNNSGSLSFFLLNF------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 241 GYGMMRIMVALNPLSQQLIYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAH 320
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGH 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 321 GLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITALFNWSPWTILLTGLG 400
Cdd:MTH00163 308 GLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLL 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2231640575 401 TLITASYSLYMFLTSQRGQVPNHAVNLSPFHTREHLLITLHLIPMVLLIAKPELMWGW 458
Cdd:MTH00163 388 SFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-458 |
2.47e-118 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 353.66 E-value: 2.47e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 1 MLKVLAPTIMLFPtIWLTSPKWLWATTTAQSLLIAMVSLSWLnWTLDTGWTASNTYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00014 1 MLKLIMPLISLLL-LPLIKYPWSWALTFSTLLLLSLFTLLNL-YPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 81 SQNHINPEpvNRQRLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00014 79 SFKIFQNN--KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLP 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 161 LLVALLLLQQSAGTLSMMMLPnteMTLTNSWGHKIWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00014 157 LLMSILLIFYTNNSLSMLMSS---MEPPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 241 GYGMMRIMVALNPLSQQLIYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAH 320
Cdd:MTH00014 234 GYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAH 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 321 GLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITALFNWSPWTILLTGLG 400
Cdd:MTH00014 314 GLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAIT 393
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2231640575 401 TLITASYSLYMFLTSQRGQVPNHAVNLSPFHTREHLLITLHLIPMVLLIAKPELMWGW 458
Cdd:MTH00014 394 SFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNW 451
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
60-454 |
3.67e-112 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 337.72 E-value: 3.67e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 60 DPLSTPLLVLTCWLLPLMILASQNHInpEPVNRQRLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGN 139
Cdd:MTH00205 56 DSLSLPLIMLSFWISLLMVLASYKVF--KSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGY 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 140 QNERLNAGTYFLFYTLAGSLPLLVALLLLQQSAGTLSMMMlpNTEMTlTNSWGHKIWWAGCLVAFLVKMPLYGVHLWLPK 219
Cdd:MTH00205 134 QPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFF--NFPLN-FSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPK 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 220 AHVEAPVAGSMVLAAVLLKLGGYGMMRIMVALNPLSQQLIYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVV 299
Cdd:MTH00205 211 AHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMV 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 300 GGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGE 379
Cdd:MTH00205 291 VGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASE 370
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2231640575 380 LMIITALFNWSPWTILLTGLGTLITASYSLYMFLTSQRGQVPNHAVNLSPFHTREHLLITLHLIPMVLLIAKPEL 454
Cdd:MTH00205 371 ILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKI 445
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
9-448 |
4.68e-90 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 282.35 E-value: 4.68e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 9 IMLFPTIWLTSPKWLWATTTAQSLLIAMV-------SLSWLNWTLDTGWTAS---NTYLATDPLSTPLLVLTCWLLPLMI 78
Cdd:COG1008 20 LLLLPRRNARLARWVALAVSLLTLLLSLYllagfdpGTGGFQFVESYPWIPSlgiSYHLGVDGISLPLVLLTALLTPLAI 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 79 LASQNHINpepvNRQRLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQNeRLNAGTYFLFYTLAGS 158
Cdd:COG1008 100 LASWNEIK----KRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGER-RIYAAIKFFLYTLAGS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 159 LPLLVALLLLQQSAGTLSMMMLPNTEMTLTNSWGhKIWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLK 238
Cdd:COG1008 175 LLMLVAILALYFLAGALTFDIAELAAAPLPLTAQ-LLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLK 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 239 LGGYGMMRIMVALNPL-SQQLIYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILM 317
Cdd:COG1008 254 MGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQM 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 318 VAHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITALFNWSPWTILLT 397
Cdd:COG1008 334 VSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILA 413
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2231640575 398 GLGTLITASYSLYMFltsQR---GQVPNHAVNLSPFHTREHLLITLHLIPMVLL 448
Cdd:COG1008 414 ALGLILTAAYLLWMY---QRvffGPLKEELAELPDLNPRELAVLAPLAALILLL 464
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
56-449 |
4.10e-85 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 269.76 E-value: 4.10e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 56 YLATDPLSTPLLVLTCWLLPLMILASQNHINpepvNRQRLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIIT 135
Cdd:PRK05846 77 HLGVDGISLLLVVLTALLTPLAVLASWEEIK----KRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 136 RWGNQNeRLNAGTYFLFYTLAGSLPL----LVALLLLQQSAGTLSMMMLPNTEMTLTnswGHKIWWAGCLVAFLVKMPLY 211
Cdd:PRK05846 153 VWGGKN-RIYAATKFFLYTLLGSLLMlvaiIYLVVVYYNATGTFDIADLLNLPLPPG---VQYWLFLAFFIAFAVKMPMF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 212 GVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMVALNPL-SQQLIYPFMILALWGIIMTGLMCLRQTDLKSLIAYS 290
Cdd:PRK05846 229 PLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 291 SVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAM 370
Cdd:PRK05846 309 SISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGL 388
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2231640575 371 PPLPNLMGELMIITALFNWSPWTILLTGLGTLITASYSLYMFLTSQRGQVPNHAVNLSPFHTREHLLitlhLIPMVLLI 449
Cdd:PRK05846 389 PGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLI----LLPLVALL 463
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-448 |
1.25e-77 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 249.86 E-value: 1.25e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 57 LATDPLSTPLLVLTCWLLPLMILASQNHINpepvNRQRLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITR 136
Cdd:TIGR01972 73 LGVDGISLLLVLLTALLTLLAILASWESIQ----KRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 137 WGNQNeRLNAGTYFLFYTLAGSLPLLVALLLLQ-QSAGTLSMMMLPNTEMTLtnsWGHKIWWAGCLVAFLVKMPLYGVHL 215
Cdd:TIGR01972 149 WGGPN-RIYAAMKFFLYTLAGSLLMLLAILGLYfLGGGTFDLLELLNLPLPF---GVQTWLFLAFFIAFAVKVPLFPLHT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 216 WLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMVALNP-LSQQLIYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGH 294
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 295 MGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLP 374
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2231640575 375 NLMGELMIITALFNWSPWTILLTGLGTLITASYSLYMFLTSQRGQVPNHAVNLSPF-HTREHLLITLHLIPMVLL 448
Cdd:TIGR01972 385 GFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAEFPDlNGREIAVLAPLVVLILFL 459
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
46-448 |
6.28e-75 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 243.05 E-value: 6.28e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 46 LDTGWTASNT--------YLATDPLSTPLLVLTCWLLPLMILASQNHINpepvNRQRLYITLLTSLQAFLIMAFGATEII 117
Cdd:MTH00204 60 NLIEWIISPTlnfqwgplVFAVDGVSLFFILLTTLLIPICILISWKSIK----FLFKEFLLCLLFLEVLLIGVFSVLDLL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 118 MFYIMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSAGTLSMMMLPNTEMTLTNswgHKIWW 197
Cdd:MTH00204 136 LFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLSI---QKWLL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 198 AGCLVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMVALNPLSQQLIYPFMI-LALWGIIMTGLM 276
Cdd:MTH00204 213 VGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVmLSVIAVIYGSLT 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 277 CLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLT 356
Cdd:MTH00204 293 TCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLF 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 357 AVWWFAANLANLAMPPLPNLMGELMIITALFNWSPWTILLTGLGTLITASYSLYMFLTSQRGQVPNHAVNLSPFHTREHL 436
Cdd:MTH00204 373 VIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELL 452
|
410
....*....|..
gi 2231640575 437 LITLHLIPMVLL 448
Cdd:MTH00204 453 AILPLIIAIFLL 464
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
15-412 |
7.84e-74 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 239.95 E-value: 7.84e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 15 IWLTSPKWLWATTTAQSLLIA-------MVSLSWLNWTLDTGWTASNTYLATDPLSTPLLVLTCWLLPLMILASQNHINp 87
Cdd:MTH00217 27 LKKIALEWSLLTLTATILLWAsfdgegqFQAIKKFEWIPGIEPVFGPVVFAVDGISIFFLILTALLTPICILISWNSIK- 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 88 epvNRQRLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLLVALLL 167
Cdd:MTH00217 106 ---FLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFT 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 168 LQQSAGTLSMMMLPNTEMtltNSWGHKIWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRI 247
Cdd:MTH00217 183 LYSYAGTTDYQALCCLKI---EKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRF 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 248 MVALNPLSQQLIYPF-MILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSA 326
Cdd:MTH00217 260 SWPLLPEASEYFSPLiQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSA 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 327 LFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITALFNWSPWTILLTGLGTLITAS 406
Cdd:MTH00217 340 LFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAG 419
|
....*.
gi 2231640575 407 YSLYMF 412
Cdd:MTH00217 420 YSIYLY 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-401 |
5.16e-67 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 216.41 E-value: 5.16e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 113 ATEIIMFYIMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSAGTLSMMMLPNTEMTLTNSWG 192
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 193 HKIWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMVALNPLSQQLIYPFMILALWGIIM 272
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 273 TGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLA-NTSYERTHSRTMILARGMQM 351
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2231640575 352 IFPLTAVWWFAANLANLAMPPLPNLMGELMIITALFNWSPWTILLTGLGT 401
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
57-449 |
5.91e-63 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 212.09 E-value: 5.91e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 57 LATDPLSTPLLVLTCWLLPLMILASQNHINpepvNRQRLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITR 136
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWHSVK----YLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 137 WGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSAGTLSMMMLPNTEMTLTNSWGHKIWwAGCLVAFLVKMPLYGVHLW 216
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSEQTQKWIF-LGIFLAMAVKIPIFPFHIW 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 217 LPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMVALNPLSQQLIYPFMI-LALWGIIMTGLMCLRQTDLKSLIAYSSVGHM 295
Cdd:MTH00226 253 LPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIaMGIVGIVYGSFATCRQIDVKRLVAYSSVAHM 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 296 GLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPN 375
Cdd:MTH00226 333 GLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGN 412
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2231640575 376 LMGELMIITALFNWSPWTILLTGLGTLITASYSLYmFLTSQRGQVPNHAVNLSPFHTREHLLITLHLIPMVLLI 449
Cdd:MTH00226 413 FIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY-FANRVTFGAPGNLITFARDVNRREFYITASMVFFAFLI 485
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
57-449 |
1.73e-56 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 194.87 E-value: 1.73e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 57 LATDPLSTPLLVLTCWLLPLMILASQNhINPEPvnrqRLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITR 136
Cdd:PRK12561 55 LGVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 137 WGNQNeRLNAGTYFLFYTLAGSLPLLVALLLLQQSAGTLSMMMlpnTEMTLTNSWG--HKIWWAGCLVAFLVKMPLYGVH 214
Cdd:PRK12561 130 WGGQK-RLYAATKFILYTALASIFILVAGLALALSGDTFTFDL---AELGAKSYPLalELLLYAGFLIAFGVKLPIFPLH 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 215 LWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMVALNPLSQQLIYP-FMILALWGIIMTGLMCLRQTDLKSLIAYSSVG 293
Cdd:PRK12561 206 TWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPaLAILGVVNIIYGALNAFAQDNVKRRLAYSSVS 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 294 HMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPL 373
Cdd:PRK12561 286 HMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGM 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 374 PNLMGELMI---ITALFNWSPW----TILLTGLGTLITASYSLYM----FLTSQRGQVPNHAVnLSPFHTREhLLITLHL 442
Cdd:PRK12561 366 SGFVSELTVflgITSSDVYSSTfrtiTILLAAVGLILTPIYLLSMlrrvFYGPRSELLPALAV-VEDAKPRE-LFIALSL 443
|
....*..
gi 2231640575 443 IPMVLLI 449
Cdd:PRK12561 444 LVPIIGI 450
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
4-403 |
8.62e-48 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 169.94 E-value: 8.62e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 4 VLAPTIMLFPTiwltSPKWLWATTTAQSLLIAMVSLSWLNWTLDTG--------WTAS-NTYLATDPLSTPLLVLTCWLL 74
Cdd:COG0651 14 LAAALLLLLGR----RRRLQRALSLLASLALLALALALLLQVLAGGplvyalggWPAPfGIVLVADRLSALFLLLTALVA 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 75 PLMILASQNHINPEPvnRQRLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQnERLNAGTYFLFYT 154
Cdd:COG0651 90 LAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK-EALRAGLKYLILN 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 155 LAGSLPLLVALLLLQQSAGTLSMMMLPNTEMTLTNSWGHKIWWAgCLVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAA 234
Cdd:COG0651 167 LVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFAL-LLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSG 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 235 VLLKLGGYGMMRIMVALNPLSQQLI--YPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSG 312
Cdd:COG0651 246 LLTKVGVYAILRVLTLLFGADPALFlgTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAG 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 313 AIILMVAHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITALFNWSPW 392
Cdd:COG0651 326 ALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAW 405
|
410
....*....|....*
gi 2231640575 393 T----ILLTGLGTLI 403
Cdd:COG0651 406 LlaavLLLSSLLTLA 420
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
38-455 |
1.95e-45 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 165.65 E-value: 1.95e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 38 SLSWLNwTLDTGWTasntyLATDPLSTPLLVLTCWLLPLMILASQnhinpePVN-RQRLYITLLTSLQAFLIMAFGATEI 116
Cdd:PRK02546 70 SYSWLP-QLGLTWS-----VGADGLSMPLILLTGFITTLAVLAAW------PVTfKPKLFYFLMLAMYGGQIAVFAVQDM 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 117 IMFYIMFEATLIPTLIIITRWGNQNeRLNAGTYFLFYTLAGSLPLLVALLLLQQSAGTLS--MMMLPNTEMTLTNswgHK 194
Cdd:PRK02546 138 LLFFLAWELELIPVYLLLAIWGGKK-RQYAATKFILYTAGSSLFILLAALAMAFYGDTPTfdMTALAAKDFGLGF---QL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 195 IWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMVALNPLSQQLIYPFMI-LALWGIIMT 273
Cdd:PRK02546 214 LCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIvLGVVNIIYA 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 274 GLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERTHsrTMIL------AR 347
Cdd:PRK02546 294 ALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTH--TLMLdemggvGQ 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 348 GMQMIFPLtavwWFAANLANLAMPPLPNLMGELMIITALFNWSPWT-------ILLTGLGTLITASYSLYM----FLTSQ 416
Cdd:PRK02546 372 KMRKMFAM----WTACSLASLALPGMSGFVAELMVFVGFATSDAYTlpfrvvvVFLAAVGVILTPIYLLSMlreiFFGPE 447
|
410 420 430
....*....|....*....|....*....|....*....
gi 2231640575 417 RGQVPNHAvNLSPFHTREHLLITLHLIPMVLLIAKPELM 455
Cdd:PRK02546 448 NKELVSHE-KLVDAEPREVFIIACLLVPIIGIGLYPKLV 485
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
99-415 |
5.27e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 161.61 E-value: 5.27e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 99 LLTSLQAFLIMAFGATE-IIMFYIMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLLVALLllqqsagtLSM 177
Cdd:MTH00094 66 ILSNLLILICLLFFVSSnMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL--------KNF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 178 MMLPNTEMTLTNSWGHKIWWAGClvaFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMVALNPLsqq 257
Cdd:MTH00094 138 FFFSLCYFDFFLSWEMFFILSLS---FMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV--- 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 258 LIYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYER 337
Cdd:MTH00094 212 YNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHI 291
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2231640575 338 THSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITALFNWSPWTILLTGLGTLITASYSLYMFLTS 415
Cdd:MTH00094 292 SKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSS 369
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
57-411 |
4.40e-42 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 155.87 E-value: 4.40e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 57 LATDPLSTPLLVLTCWLLPLMILASQnhinpePVNRQ-RLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIIT 135
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 136 RWGNQnERLNAGTYFLFYTLAGSLPLLVallllqqsaGTLSMMMLPNTEMTLT-NSWGHK--------IWWAGCLVAFLV 206
Cdd:CHL00011 154 MWGGK-KRLYSATKFILYTAGGSIFLLI---------GVLGMGLYGSNEPTLNfETLANQsypvaleiLFYIGFLIAYAV 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 207 KMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMVALNPLSQQLIYPF-MILALWGIIMTGLMCLRQTDLKS 285
Cdd:CHL00011 224 KLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWlVIVGAIQIIYAASTSLGQRNLKK 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 286 LIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERThsRTMILAR--GMQMIFPLTAVWWFAA 363
Cdd:CHL00011 304 RIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSF 381
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2231640575 364 NLANLAMPPLPNLMGELM----IITALFNWSPWTILLT---GLGTLITASYSLYM 411
Cdd:CHL00011 382 SMASLALPGMSGFVAELIvffgIITSQKYLLMPKILITfvmAIGMILTPIYLLSM 436
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
54-458 |
6.95e-42 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 155.24 E-value: 6.95e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 54 NTYLATDPLSTPLLVLTCWLLPLMILASQnhinpEPVNRQRLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLII 133
Cdd:PRK06473 72 SYHLGVDGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 134 ITRWGNQNeRLNAGTYFLFYTLAGSLPLLVALLLLQQSAGTLSMMMLPNTEMTLTNSwGHKIWWAGCLVAFLVKMPLYGV 213
Cdd:PRK06473 147 IAIWGGQR-RGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 214 HLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMVALNPLSQQLIYPFM-ILALWGIIMTGLMCLRQTDLKSLIAYSSV 292
Cdd:PRK06473 225 HTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMVAYSSI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 293 GHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARGM---QMIFPLTAVWWFAANLANLA 369
Cdd:PRK06473 305 GHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAG 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 370 MPPLPNLMGELMIITALFNWSPWTILLTGLGTLITASYSLYMFLTSQRGQVPNHAVNLSPFHTREHLLITLHLIPMVLLI 449
Cdd:PRK06473 385 IPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPRVLWSERLPALVLAVLIVVLG 464
|
....*....
gi 2231640575 450 AKPELMWGW 458
Cdd:PRK06473 465 IQPSWLVRW 473
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-110 |
3.94e-31 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 115.70 E-value: 3.94e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 1 MLKVLAPTIMLFPTIWLTSPKWLWATTTAQSLLIAMVSLSWLNWTLDTGWTASNTYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 2231640575 81 SQNHINPEPVNRQRLYITLLTSLQAFLIMA 110
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
57-407 |
9.21e-31 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 124.05 E-value: 9.21e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 57 LATDPLSTPLLVLTCWLLPLMILASQnhinpEPVNRQRLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITR 136
Cdd:PRK07363 75 LGVDGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAI 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 137 WGNQnERLNAGTYFLFYTLAGSLPLLVALLLLQQSAGTLSMMMLPNTEMTLTNSwGHKIWWAGCLVAFLVKMPLYGVHLW 216
Cdd:PRK07363 150 WGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 217 LPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMVALNPLSQQLIYPfmILALWG---IIMTGLMCLRQTDLKSLIAYSSVG 293
Cdd:PRK07363 228 LPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGtisVIYGALSAIAQKDIKRMVAYSSIG 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 294 HMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARG-MQMI--FPLTAVWWFAANLANLAM 370
Cdd:PRK07363 306 HMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGlMNPIrgLPLTSALLVLAGMASAGI 385
|
330 340 350
....*....|....*....|....*....|....*..
gi 2231640575 371 PPLPNLMGELMIITALFNWSPWTILLTGLGTLITASY 407
Cdd:PRK07363 386 PGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY 422
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
201-450 |
3.78e-28 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 116.57 E-value: 3.78e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 201 LVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMR--IMVALNPLSQQLIYPFMILALWGIIMTGLMCL 278
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRyyILIDAAIGSDFPGRLLLIFGLLSVLVAAFFLL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 279 RQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAV 358
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGW 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 359 WWFAANLANLAMPPLPNLMGELMIITALFNWSPWTILLTGLGTLITASYSLYMFLTSQrgqvpnhAVNLSPFHTREHLLI 438
Cdd:PRK06458 381 GLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVRRVAGM-------VFGEPPEAVNRGDLG 453
|
250
....*....|..
gi 2231640575 439 TLHLIPMVLLIA 450
Cdd:PRK06458 454 WLTTSPMFVHLV 465
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-407 |
2.27e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 114.21 E-value: 2.27e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 4 VLAPTIMLFPTiwltSPKWLWATTTAQSLLIAMVSLSWLNWTLDTGWTASNTY---------LATDPLSTPLLVLTCWLL 74
Cdd:PRK08375 15 LAAALIVLLPK----RRRLRWALALLVAALTFALAISLLPQVLDGGVIAYVVGgwppgigieLRADSLSALFLLVTSILA 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 75 PLMILASQnhinPEPVNRQRLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQnERLNAGTYFLFYT 154
Cdd:PRK08375 91 IAALLYAI----GYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR-RALAAARKYLIVG 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 155 LAGSLPLLVALLLLQQSAGTLSMMML-----PNTEMTLTnswghkiwWAGCLVAFLVKMPLYGVHLWLPKAHVEAPVAGS 229
Cdd:PRK08375 166 LIGSTFLLIGVGLLYGVTGTLNMADLagalaENPTVVTA--------FGFVLLALALKAAVFPLHTWLPRAYPAAPPVVT 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 230 MVLAAVLLKLGGYGMMRIMVAL----NPLSQQLIYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQ 305
Cdd:PRK08375 238 ALLSGLVTKVAVYALIRIYFTVfggdFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 306 TPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITA 385
Cdd:PRK08375 318 TPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVG 397
|
410 420
....*....|....*....|...
gi 2231640575 386 LFN-WSPWTILLTGLGTLITASY 407
Cdd:PRK08375 398 AVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-412 |
9.18e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 112.76 E-value: 9.18e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 57 LATDPLSTPLLVLTCWLLPLMILASQNHINPEPVNRqrLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITR 136
Cdd:PRK12667 78 YEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPE--WYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAY 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 137 WGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSAGTLSMMMLPNTEMTL-----TNSWGHKIWWAG-----CLVAFLV 206
Cdd:PRK12667 156 YRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLsfpltGGLAGNPPLALGvalalALWAFTI 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 207 KMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIM-------VALNPLSQQLIYPFMILALWGIIMTGLMCLR 279
Cdd:PRK12667 236 KAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 280 QTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVW 359
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFA 395
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 2231640575 360 WFAANLANLAMPPLPNLMGELMIITALFNWSPWTILLTGLgtLITASYSLYMF 412
Cdd:PRK12667 396 FLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLL--IASAISLVGYF 446
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
201-432 |
2.29e-18 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 87.12 E-value: 2.29e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 201 LVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRiMVALNPLSQQLIYPFMILALWGIIMTGLMC--- 277
Cdd:PRK08676 213 FIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILR-LSALLRQSGAAEQFSNVLIGLGIFSIAVAAfsm 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 278 LRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTA 357
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAA 371
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2231640575 358 VWWFAANLANLAMPPLPNLMGELMIITALFNWSPWTILLTgLGTLITASYSLYMFLTSQRGQVPNHAVNLSPFHT 432
Cdd:PRK08676 372 WGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAV-LLLLLLAASSFAIFLLKAFTRVSEGNADRPVFRT 445
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-410 |
7.66e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 85.79 E-value: 7.66e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 109 MAFGATEIIMFYIMFEATLIPTLIIITRwGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSAGTLSMMML-------- 180
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLavrldelp 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 181 PNTEMTLtnswghkiwWAGCLVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMVALNPlSQQLIY 260
Cdd:PRK12665 205 SGTRTAL---------FAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDT 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 261 PFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERTHS 340
Cdd:PRK12665 275 LLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGS 354
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2231640575 341 RTMILARGMQMIFPLTAVWWF--AANLAnlAMPPLPNLMGELMIITA-LFNWSPWTILLTGlGTLITASYSLY 410
Cdd:PRK12665 355 SSLRRLGGLAKASPLLAVLFFvpALNLG--GIPPFSGFIGKVALLEAgAEDGTWLAWALVA-GGVVTSLLTLY 424
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
111-386 |
2.61e-16 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 81.20 E-value: 2.61e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 111 FGATEIIMFYIMFEATLIPTLIIITRwGNQNERLNAGTYFLFYTLaGSLPLLVALLLLQQSAGTLSMMMLPNtEMTLTNS 190
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVLSAI-GAYAMLYAIFLIYAKTGTFDFADISQ-GLINDTS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 191 WGHKIWWAGCLVAF-LVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMrIMVALNPLSQQLI---------- 259
Cdd:PRK08668 192 TGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFL-LVLYVLPGTKLFSefgtyrgvpl 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 260 --YPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYER 337
Cdd:PRK08668 271 fnYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYR 350
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2231640575 338 THSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITAL 386
Cdd:PRK08668 351 TGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL 399
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
198-402 |
1.01e-15 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 79.25 E-value: 1.01e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 198 AGCLVAFLVKMPLYGVHLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRIMVALNPLSQQLIYPFMILALWGIIMTGLM 276
Cdd:PRK06525 211 LGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLM 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 277 CLRQTDLKSLIAYSSVGHMGLVVGGILIQ---TPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARGMQMIF 353
Cdd:PRK06525 290 YLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKL 369
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 2231640575 354 PLTAVWWFAANLANLAMPPLPNLMGELMIITALFNWSPWTILLTGLGTL 402
Cdd:PRK06525 370 PLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
96-440 |
2.58e-15 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 78.07 E-value: 2.58e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 96 YITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITrWGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSAGTL 175
Cdd:PRK12663 110 FPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 176 SMM-------MLPNTEMTLTNSwghkiwwAGCLVAFLVKMPLYGVHlWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIM 248
Cdd:PRK12663 189 NMAhiamrlnDMGDTATLTTIA-------LLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVF 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 249 VALNPLSQQLIYPFMILALWGIIMTGLM-CLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSAL 327
Cdd:PRK12663 261 TLLFPQERELLHPLLATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTAL 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 328 FCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITALFNWSPWTILLTGLGTLITASY 407
Cdd:PRK12663 341 FLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMY 420
|
330 340 350
....*....|....*....|....*....|....
gi 2231640575 408 SLY-MFLTSQRGQVPNHAVNLSPFHTREHLLITL 440
Cdd:PRK12663 421 SLFrIFFLAYWGDKDGEEVNFKPIPLYRKLPLSI 454
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
202-387 |
2.98e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 78.23 E-value: 2.98e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 202 VAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMVALnpLSQQLIYPFMIL------ALWGIIMTgl 275
Cdd:PRK08667 213 LGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDV--LSPELWWGVLILlagsisALLGVIYA-- 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 276 mcLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSG----AIILMVA-------HGLASSALFCLANTSYERTHSRTMI 344
Cdd:PRK08667 289 --LKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGldtlALLALGGalfhslnHALFKSLLFLTAGSVVHATGTRNIE 366
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2231640575 345 LARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITALF 387
Cdd:PRK08667 367 KMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-410 |
4.64e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 76.91 E-value: 4.64e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 91 NRQRLYITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITrWGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQ 170
Cdd:PRK07234 91 AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 171 SAGTLSMMMLPNTEMTLTnswghkiwwAGCLVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMVA 250
Cdd:PRK07234 170 ANGTFAFSGLATADPEAF---------ALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 251 LNPLSQQLIYPFMILALWGIIMTglmcLRQTDLKSLIAYSSVGHMGLVVGGILIqtpwgfsgAIILMVAHGLASSALFCL 330
Cdd:PRK07234 241 VPGLDLIVRIFGVGTALLGVLFA----LLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLC 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 331 ANTSYERTHS--RTMILARGMQMifPLTavwwfaanLANLAMPPLPNLMG---ELMIITALFNWSPWTILLTGLGTLITA 405
Cdd:PRK07234 309 AGALPSRNFTelISQMLGIGKWI--PLT--------MASFSIAGFPLLAGfvsKVLTLKNLLPWQAIALNLAAVGTAASF 378
|
....*
gi 2231640575 406 SYSLY 410
Cdd:PRK07234 379 WKFIF 383
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
98-409 |
5.62e-15 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 77.39 E-value: 5.62e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 98 TLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQNERLNAGTyfLFYTLAGSLPLLVALLLLQQSAGTLSM 177
Cdd:PRK12650 114 LLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQTGTTSL 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 178 mmlpnTEMTLTNSWGHKIWWAGcLVAFLVKMPLYG------VHLWLPKAHVEA-PV-----AGSMVLAAVLLKLGGYGMM 245
Cdd:PRK12650 192 -----SGILHSDVWAEKPGLTT-VVAVLIAVAAFTksaqfpFHFWLPEAMAAItPVsaflhAAAVVKAGIYLLLRFSPVF 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 246 RIMVALNPLsqqLIYPFMILAlwgiIMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASS 325
Cdd:PRK12650 266 HDVAVWNWL---LIIVGMITA----LMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKS 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 326 ALFCLANTSYERTHSRTM--ILARGMQMIFPLTAVWWFAANLAnlAMPPLPNLMGELMIITALF-----NWSPWTILLT- 397
Cdd:PRK12650 339 SLFMLIGVVDHQAGTRDIrrLGSLWRRMPFTFVSVTIAALSMA--AVPPLFGFVSKEGMLTAFLeapggNAGVVLLLVGa 416
|
330
....*....|..
gi 2231640575 398 GLGTLITASYSL 409
Cdd:PRK12650 417 ALGAVFTFAYSA 428
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
4-460 |
1.48e-14 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 75.54 E-value: 1.48e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 4 VLAPTIMLFPTIWLTSPKWLWATTTAQSLLIAMVSLsWLNWTLDTGWTASNTYLAtDPLSTPLLVLTCWLLPLMILASQN 83
Cdd:COG1007 15 LGALVLLLLDLFLPRRSRRLLAGLALLGLLLALALL-LLALGGGTGTAFGGMFVV-DGFALFFKLLILLAALLVLLLSRD 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 84 HINPEPVNRQRLYITLLTSLQAFLIMAfGATEIIMFYIMFEATLIPTLIIITRWGNQNERLNAGT-YFLF---------- 152
Cdd:COG1007 93 YLERRGLLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLgalssgflly 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 153 -----YTLAGSLPLLVALLLLQQSAGTLSMMMLPnteMTLTnswghkiwwagcLVAFLVKMPLYGVHLWLPKAHVEAPVA 227
Cdd:COG1007 172 gisllYGATGSLNLAGIAAALAAGGANSPLLLLG---LVLV------------LAGLAFKLSAVPFHMWTPDVYEGAPTP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 228 GSMVLAAVLlKLGGYGM-MRIMV-ALNPLSQQLIYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQ 305
Cdd:COG1007 237 VTAFLATAP-KIAAFAAlLRLLVeAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAG 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 306 TPWGFSGAIILMVAHGLASSALF-CLANTSYERTHSRTMILARGMQMIFPLTAVwWFAANLANLA-MPPLPNLMGELMII 383
Cdd:COG1007 316 TPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLAL-AMTIFLLSLAgIPPTAGFFGKFYVF 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 384 TALFNWSPWTILLTG-LGTLITASYSL----YMFLtsqRGQVPNHAVNLSPFHTrehLLITLHLIPMVLLIAKPELMWGW 458
Cdd:COG1007 395 SAAVEAGLYWLAVIAvLNSVISAYYYLrvvkAMYF---DEPEEEAPISAPPGLR---VALVIAALLVLLLGIFPGPLLDL 468
|
..
gi 2231640575 459 CY 460
Cdd:COG1007 469 AA 470
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-402 |
6.35e-14 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 74.19 E-value: 6.35e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 214 HLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRimvaLNPLSQQLIYPFMILALWG---IIMTGLMCLRQTDLKSLIAY 289
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGgltMLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 290 SSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTavwWFAANLANLA 369
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPIT---AAAALLAALS 366
|
170 180 190
....*....|....*....|....*....|....*.
gi 2231640575 370 M---PPLPNLMGELMIITALFNWSPWTILLTGLGTL 402
Cdd:PRK12647 367 MaglPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
106-407 |
2.91e-13 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 71.72 E-value: 2.91e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 106 FLIMAFGATEIIM------FYIMFEATLIpTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSAGTLSMMM 179
Cdd:PRK08377 114 FLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAH 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 180 LPNTEMTLtNSWGHKIWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMVALNPLS--QQ 257
Cdd:PRK08377 193 IAQLAGTI-DPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANgwSS 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 258 LIYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYER 337
Cdd:PRK08377 272 VLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGIT 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2231640575 338 THSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITALFNWS-PWTILLTGLGTLITASY 407
Cdd:PRK08377 352 LGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGyTWPVALVLGASVVEAVY 422
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-407 |
1.05e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 69.74 E-value: 1.05e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 96 YITLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSAGTL 175
Cdd:PRK08376 123 YYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 176 SMMMLPnTEMTLTNSWGHKIWWAGCLVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLaaVLLKLGG-YGMMRIM-----V 249
Cdd:PRK08376 203 NMAYLA-VKMSENPTVVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLfsiygP 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 250 ALNPLSQQLIypFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMG---------LVVGGILIQTPWGF---SGAIILM 317
Cdd:PRK08376 280 AINLATVGWV--IIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEialAGGIYHI 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 318 VAHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITALFNWSPWTILLT 397
Cdd:PRK08376 358 VNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIA 437
|
330
....*....|.
gi 2231640575 398 GLGT-LITASY 407
Cdd:PRK08376 438 MIGSvLTLASF 448
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
205-413 |
6.11e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 64.45 E-value: 6.11e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 205 LVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMVALNPLS--QQLIYPFMIL---ALWGIIMTGLMCLR 279
Cdd:PRK06589 221 IAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSylQRIFAEFNWLifiPIVSIFYSSLKALK 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 280 QTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVW 359
Cdd:PRK06589 301 TDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFI 380
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 2231640575 360 WFAANLANLAMPPLPNLMGELMIITALFNWS-PWTILLTGLGTLITASY-SLYMFL 413
Cdd:PRK06589 381 ISISSLSLIGIPIFSGFISKFLILLAASEQNqPWLSIIVMLVVIASSILsALYLLK 436
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
91-449 |
8.53e-11 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 64.39 E-value: 8.53e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 91 NRQRLYITLLTSLQAFLIMAFGATEIIMfYIMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQ 170
Cdd:PRK12646 108 NLPRFYFYLTLFMFSMIGIVLSDNTILM-YVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYI 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 171 SAGTLSMMMLPNTEMTLTNSwghkIWWAGCLVAFLV----KMPLYGVHLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMM 245
Cdd:PRK12646 187 MTGTNNITEILGQADHIKNH----GLFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLF 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 246 RIMVALNpLSQQLIYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVV-----GGILIQTPWG----------F 310
Cdd:PRK12646 262 RFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMamvgiGGGYAQHQQDaiasiyvfvlF 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 311 SGAIILMvAHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITALFNWS 390
Cdd:PRK12646 341 AALFHLM-NHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTG 419
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2231640575 391 P-------WTILLTGLG---TLITASYSLYMFLTSQRGQVPNHAVNLSPFHtrEHLLITLHLIPMVLLI 449
Cdd:PRK12646 420 QlsqfsliSMIIIVFIGviaSIFTFTYALYMVKEVFWGKYDSKVFTKKNIH--EPWLFSLPSLILMVLV 486
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
214-448 |
1.25e-10 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 63.63 E-value: 1.25e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 214 HLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRI--MVALNPLSQQLIypfMILALWGIIMTGLMCLRQTDLKSLIAYS 290
Cdd:COG1009 231 HFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLspLFALSPVWLTVV---AIIGAITALFAALIALAQTDIKRVLAYS 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 291 SVGHMGLVVGGILIQtpwGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAM 370
Cdd:COG1009 307 TVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGI 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 371 PPLPNLMGELMIITALFNWSPWTILLTGLGTL---ITASYSLYM----FLTSQRGQVPNHAVNlSPFhtrehllitLHLI 443
Cdd:COG1009 384 PPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLfflvFFGKPRPKTPKHPHE-SPW---------LMTL 453
|
....*
gi 2231640575 444 PMVLL 448
Cdd:COG1009 454 PLVVL 458
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-450 |
1.39e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 63.04 E-value: 1.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 57 LATDPLSTPLLVLTCWLLPLMILASQNHINPEpvnRQRLYI-TLLTSLQAFLIMAFGATEIIMFYIMFEATLIPTLIIIT 135
Cdd:PRK07691 73 FVADMFAALLVLTSSIITFLVILYSFQTIGIE---RERYYYyPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIV 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 136 RWGNQNERLNAGTYFLFYTLAgSLPLLVALLLLQQSAGTLSMMMLPN--TEMTLTNSWGHKIWWAGCLVAFLVKMPLYGV 213
Cdd:PRK07691 150 IGGTKIQLRESIKYVLINVVS-SAFFVVAVAILYSVVGTLNMADISVkiAELSAGQTGLITVVAILFLFVFATKAGLFPL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 214 HLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMVALNPLSQQLIYPFM-ILALWGIIMTGLMCLRQTDLKSLIAYSSV 292
Cdd:PRK07691 229 YFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLIlILALLTIIFGVIGAVAYFDIKKIIIYNIM 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 293 GHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPP 372
Cdd:PRK07691 309 IAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPP 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 373 LPNLMGELMIITALFN----WSPWTILLTGLGTLitasYS-LYMFLTSQRGQVPNHAVNlspfhtrEHLLITLHLIPMVL 447
Cdd:PRK07691 389 LSGFYGKFFIVEGTFEagfyVSGIIVLLSSLLVL----YSvIKIFLKGFWGEPKGYDLN-------NKVPVKKLLLPAVV 457
|
...
gi 2231640575 448 LIA 450
Cdd:PRK07691 458 LVA 460
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-397 |
7.68e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 60.90 E-value: 7.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 201 LVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMvaLNPLSQQLIYP-------FMILALWGIIMT 273
Cdd:PRK12662 216 MVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIV--YDVFKANFVFTtlpfnnvFMILAALAIVFG 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 274 GLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARGMQMIF 353
Cdd:PRK12662 294 SVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSM 373
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 2231640575 354 PLTAVWWFAANLANLAMPPLPNLMGELMIITALFNWSPWTILLT 397
Cdd:PRK12662 374 PKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVV 417
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
170-388 |
8.85e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 61.00 E-value: 8.85e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 170 QSAGTLSMMMLpnTEMTLTNSWGHKIWWAGcLVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMV 249
Cdd:PRK08042 159 QRYGTLDLRLL--DMRMQQLPLGSDIWLLG-VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSL 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 250 ALNPLSQQLIYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLV-------VGGILIQTP----WGFSGAIILMV 318
Cdd:PRK08042 236 LGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgagVTGIALEQPaliaLGLVGGLYHLL 315
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 319 AHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITALFN 388
Cdd:PRK08042 316 NHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-403 |
1.89e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 59.48 E-value: 1.89e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 201 LVAFLVKMPLYGVHLWLPKAHVEA--PVAGsmvLAAVLLKLGGYGMMRI--------MVALNPLSQQLIYPfmiLALWGI 270
Cdd:PRK12666 217 LVVFLIKAAMWPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLstllfgpeAGASAGFGQDWLLP---GGLATL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 271 IMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTsYERTHSRTM-ILARGM 349
Cdd:PRK12666 291 AFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADL-VERQRGAAAdRLAVTP 369
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2231640575 350 QMIFP-----------------LTAVWWFAANLANLAMPPLPNLMGELMIITALFN----WSPW----TILLTGLGTLI 403
Cdd:PRK12666 370 ELYDLdeeeeeevgvaipatmaLLGLLFFICALALAGLPPLSGFLGKFALLQALLNppgaGAAWwlwaLVLLSGLAALI 448
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
201-328 |
2.50e-09 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 59.06 E-value: 2.50e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 201 LVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLlKLGGYGM-MRI-MVALNPLSQQLIYPFMILALWGIIMTGLMCL 278
Cdd:PRK05777 211 LVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLlVVAFGGLSEDWQQVLAIIAIASMLVGNLAAL 289
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 2231640575 279 RQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALF 328
Cdd:PRK05777 290 SQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
208-387 |
2.76e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 59.52 E-value: 2.76e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 208 MPLygvHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMVALNPlSQQLIYPFMILALWGI--IMTGLMCLRQTDLKS 285
Cdd:PRK06521 227 VPL---HVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLG-APGWWWGVLVLALGAIsaVLGVLYALAEHDLKR 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 286 LIAYSSVGHMGLVVGGI---LI--------QTPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMI----LARGMq 350
Cdd:PRK06521 303 LLAYSTIENIGIIFVGLglaMVfiaygmplLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEklggLIRRM- 381
|
170 180 190
....*....|....*....|....*....|....*..
gi 2231640575 351 mifPLTAVWWFAANLANLAMPPLPNLMGELMIITALF 387
Cdd:PRK06521 382 ---PWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLL 415
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
201-456 |
3.07e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 58.81 E-value: 3.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 201 LVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMV-ALNPLSQQLIYPFMILALWGIIMTGLMCLR 279
Cdd:TIGR01770 210 LVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLyILFGFSEAWQIFLAIIAFLSMLIGNFGALA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 280 QTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALF-CLANT-SYERTHSRTMILARGMQMIFPLTA 357
Cdd:TIGR01770 290 QKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgVLSLLrSYKDEWIEYISDFAGLFKTNPILA 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 358 VwWFAANLANLA-MPPLPNLMGELMIITALFNWSPWTI-LLTGLGTLITASYSL----YMFLTSqrgqvPNHAVNLSPFH 431
Cdd:TIGR01770 370 I-LILIFMFSLAgIPPLAGFFGKFYVFFALLKSGLYWLaVIAVLTSVIGAFYYLrvvkVMYFDK-----PERRIPSNPQS 443
|
250 260
....*....|....*....|....*
gi 2231640575 432 TREHLLITLHLIPMVLLIAKPELMW 456
Cdd:TIGR01770 444 KAQSLLLSISALFILFLGLFPSLIL 468
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
73-345 |
1.58e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 56.47 E-value: 1.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 73 LLPLMI-LASQNHINPEPVNRQRLYITLltSLqAFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQNERLNAGTYFL 151
Cdd:MTH00062 52 LLVLFLgLYSQVMFYNLLSGVSRFFLFL--SL-IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 152 FYTLAGSLPLLVALLLLQQSAGTLSMmmlpnTEMTLTNSWGHKIWWAGCLVaFLVKMPLYGVHLWLPKAHVEAPVAGSMV 231
Cdd:MTH00062 129 GYLLLTSLPLLLCLLYLSLVNGSFNF-----SDWGSDDSVSLIVYYVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIF 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 232 LAAVLLKLGGYGMMRIMVALNPLSqqlIYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFS 311
Cdd:MTH00062 203 LSGYIMKLGLLGVYRFCGFIFSGS---FLGYLFLCCLFSVFFLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSIN 279
|
250 260 270
....*....|....*....|....*....|....
gi 2231640575 312 GAIILMVAHGLASSALFCLANTSYERTHSRTMIL 345
Cdd:MTH00062 280 LSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVL 313
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
94-409 |
3.73e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 55.99 E-value: 3.73e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 94 RLYITLLTSLQAFLIMAFGATEIIMFyIMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSAG 173
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 174 TLSMMMLPNTEMTLTNSWGHKIWWAGCLVAFL------VKMPLYgvhLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMR 246
Cdd:PRK12649 191 TYDIATILQDSELIENIKGHPLFLITLILIFIgaaaksAQGPFY---IWLPNA-MEAPTPVSAFLhSATMVKAGVYLVAR 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 247 ImvalNPLSQQLIYPFMILALWGII---MTGLMCLRQTDLKSLIAYSSVGHMGLVV---GGILIQTP-WGFSGAIILMVA 319
Cdd:PRK12649 267 I----HPIFSGTEAWFILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISQLAYLMtmyGYTTYHEPgLGVAAATFHLLN 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 320 HGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITALFNWS-----PWTI 394
Cdd:PRK12649 343 HATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYETSVEMGaliggPFTI 422
|
330
....*....|....*...
gi 2231640575 395 LLTG---LGTLITASYSL 409
Cdd:PRK12649 423 IIPAvavLGGVFTFAYSI 440
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
263-385 |
2.96e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 49.64 E-value: 2.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 263 MILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRT 342
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 2231640575 343 MILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITA 385
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQA 392
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
201-410 |
1.20e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 48.00 E-value: 1.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 201 LVAFLVKMPLYGVHLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRIMVALNPLSQQLiYPFMILALWGIIMTGLMCLR 279
Cdd:PRK12644 210 LVGALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLAPGFADVPVWR-PTVLVLGLATMLLGGWRALR 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 280 QTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVw 359
Cdd:PRK12644 288 QHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAV- 366
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 360 wfAANLANLAMPPLPNLMG----ELMIIT-----ALFNWSPWTILLTGLGTLITASYSLY 410
Cdd:PRK12644 367 --VAALAAASMAGLPPLLGfvakEAALEAvlhdgALGPAGPVVLAGIVLGSILTVAYSLR 424
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
202-328 |
1.88e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 46.56 E-value: 1.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 202 VAFLVKMPLYGVHLWLPKAHVEAPVagsmVLAAVLLKLGGYGMMRIMVALNPLsqqlIYPFMILALWGIIMTGLMCLRQT 281
Cdd:MTH00196 103 VALLFKLSVAPFHMWAPDVYEGAPT----KTTALLAIVPKLGIFSILVSIGLN----VNILLIGGLFSLFVGAIGALNQT 174
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 2231640575 282 DLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALF 328
Cdd:MTH00196 175 KIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
201-415 |
9.23e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 44.39 E-value: 9.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 201 LVAFLVKMPLYGVHLWLPkaHVEAPVagSMVLAAVLLKLGGYGMMRIMVALNPLSQQLIYPFMilALWGIIMTGLMCLRQ 280
Cdd:MTH00011 95 LVSLMLKLGMAPCHFWFP--SVMSSI--SWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSM--AAMSALAGGLGGMNQ 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 281 TDLKSLIAYSSVGHMGLvvggILIQTPWGFSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARgmqmIFPLTAVWW 360
Cdd:MTH00011 169 TQLRPLLAYSSIGHMGW----MTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISS----MSQTTSMSL 240
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 2231640575 361 FAANLANLAMPPLPNLMGELMIITALFNWSPWTILLTGL-GTLITASYSLYMFLTS 415
Cdd:MTH00011 241 FIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIvGSLMNLFYYLNLIFNF 296
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
201-415 |
9.75e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 44.11 E-value: 9.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 201 LVAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLlKLGGYGMMRIMVALNplsqQLIYPFMILALWGIIMTGLMCLRQ 280
Cdd:MTH00144 91 LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLLSNFLDLY----WLAYLLCVISVLSALVGSIGGLNQ 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 281 TDLKSLIAYSSVGHMGLVVGGILiqtpWGFSGAIILMVAHGLASSALFCLanTSYERTHSRTMILARGMQMIFPLTAVWW 360
Cdd:MTH00144 166 TQVRALLAYSSISHTGWMLVAIL----HGSWLMWMYFLIYIVSSGFLFFS--LWSGDSGSMKDLGSLKPSYKTGLSIISL 239
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 2231640575 361 FaanLANLAMPPLPNLMGELMIITALFNWSPW-TILLTGLGTLITASYSLYMFLTS 415
Cdd:MTH00144 240 L---LSLGGLPPFLGFCSKLLVLISSMESSPLlLILLLLLGSLISLFFYLSVFFSS 292
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
204-427 |
3.99e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 42.86 E-value: 3.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 204 FLVKMPLYGVHL--WLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRIMVALNPLSQQLI-YPFMILALWGIIMTGLMCLRQ 280
Cdd:PRK06459 168 FIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFgLTILAIGAFSILFGALYAYVS 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 281 TDLKSLIAYSSVGHMG--LVVGGILIQTPWGFS--------GAIILMVAHGLASSALFCLANTSYERTHSRTMILARGMQ 350
Cdd:PRK06459 248 ENVKGLLAFSTIENNGaiLVALGLYMVTKQLITsiehfsliTVILYSFAHSVAKTGLFLSSGLQEKQSITYSKKIRNRWI 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 351 MIfpltAVWWFAANLANLamPPLPNLMGELMIITALFNWSPWTILLTGLGTLI------------TASYSLYMFLTSQRG 418
Cdd:PRK06459 328 EL----GLTLLASSLSGL--LPNIGGVASWLLLESLFMFAYVLHNVISILFIVtgaiiamgeglaTALLIKYITYTSLFR 401
|
....*....
gi 2231640575 419 QVPNHAVNL 427
Cdd:PRK06459 402 NTKEQLSKI 410
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
197-412 |
6.61e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 42.32 E-value: 6.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 197 WAGCLVAFLVKM---------PLygvHLWLPKAhVEAPV-------AGSMVLAAVLLklggygmmrimVA-LNPLSQQLI 259
Cdd:PRK07376 224 WLALLLCILVFLgpmaksaqfPL---HVWLPDA-MEGPTpisalihAATMVAAGVFL-----------VArMYPVFEQFP 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 260 YPFMILALWGIIMTGL---MCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPwgfSGAIILMVAHGLASSALFcLANTS-- 334
Cdd:PRK07376 289 AVMTVIAWTGAITAFLgasIALTQNDIKKGLAYSTISQLGYMVMAMGCGAY---SAGLFHLMTHAYFKAMLF-LGSGSvi 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 335 --------YERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMPPLPNLMGELMIITALFNWSPwtiLLTGLGTLITAS 406
Cdd:PRK07376 365 hgmeevvgHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANP---ALWFVGFLTAGM 441
|
....*.
gi 2231640575 407 YSLYMF 412
Cdd:PRK07376 442 TAFYMF 447
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
245-320 |
7.72e-04 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 41.96 E-value: 7.72e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2231640575 245 MRIMV-ALNPLSQQLIYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAH 320
Cdd:PRK02504 261 IRLLVtAFPSFDEQWKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTEAGYASMVFYLLAY 337
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
202-318 |
1.77e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 40.77 E-value: 1.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 202 VAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVllklGGYGMMRIMVALNPLSQQLIypfmILALWGIIMTGLMCLRQT 281
Cdd:MTH00199 198 ISLLFKLSAAPFHMWAPDVYEGAPTITTALLATV----PKIGVFSILVQIGPVTNVVL----ICAVLSIIYGAIGALNQT 269
|
90 100 110
....*....|....*....|....*....|....*..
gi 2231640575 282 DLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMV 318
Cdd:MTH00199 270 KIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMI 306
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
214-392 |
4.66e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 39.51 E-value: 4.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 214 HLWLPKAhVEAPVAGSMVLAAVLLKLGGYGMMRIM--VALNPLSQQLIypfMILALWGIIMTGLMCLRQTDLKSLIAYSS 291
Cdd:PRK07390 241 HLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQpvLALSPVALTVL---IVIGTVTAIGASLVAIAQIDIKRALSYST 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 292 VGHMGLVVGGILIQTPwgfSGAIILMVAHGLASSALFCLANTSYERTHSRTMILARGMQMIFPLTAVWWFAANLANLAMP 371
Cdd:PRK07390 317 SAYLGLVFIAVGLQQP---DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALL 393
|
170 180
....*....|....*....|.
gi 2231640575 372 PLPNLMGELMIITALFNWSPW 392
Cdd:PRK07390 394 PLGGFWALLRLADGLWAVSPW 414
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
198-403 |
6.40e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 38.91 E-value: 6.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 198 AGCLVAF--LVKMPLYGVHLWLPKAhVEAPVAGSMVLAAVLLKLGGYGMMRIMvalnPLSQQLIYPFMILALWGIIMT-- 273
Cdd:PRK08168 202 AALLLVLavILKTAQLPVHGWLIQV-MEAPTPVSALLHAGVVNLGGFVLIRFA----PLLEQAPPARWLLVLVGLATAvl 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 274 -GLMCLRQTDLKSLIAYSSVGHMGLvvggILIQTPWG-FSGAIILMVAHGLASSALFCLANTSYERTHSRTM-------- 343
Cdd:PRK08168 277 aGLVMLTRISIKVRLAWSTVAQMGF----MLLECGLGlYELALLHLVAHSLYKAHAFLSASEAVRDTRLRRLqgpqsaag 352
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2231640575 344 ---ILARGMQMIFPLTAV--WWFAANLANLAMPPLPNLMGELMIITALFNWSPWTILLTGLGTLI 403
Cdd:PRK08168 353 vvsLLLAPLLSAALVLLLqsLLPLGAWPWWWSAVLALAWAPLLWQPCASGASTLSGLGLGLLLVA 417
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
202-328 |
6.47e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 39.07 E-value: 6.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231640575 202 VAFLVKMPLYGVHLWLPKAHVEAPVAgSMVLAAVLLKLGGYGMMRIMVALNPLsqqliypFMILALWGIIMTGLMCLRQT 281
Cdd:MTH00198 307 VAILFKLAAAPFHMWTPDVYEGAPTP-TTALIAIIPKFTVYILLTSLVITSKL-------LLSVAIISLVVGAFGALNQT 378
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 2231640575 282 DLKSLIAYSSVGHMGLVVGGILIQTPWGFSGAIILMVAHGLASSALF 328
Cdd:MTH00198 379 RIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALASF 425
|
|
| |
