|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.98e-161 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 455.05 E-value: 1.98e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 1 MSPHTNVIIISSLIMGPLLTMSSSHWILAWTGLEINTLAIIPLIAKQHHPRAIEAATKYFLTQATASTLILFSSIMNAWT 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 81 LGQWDITQMSNDTPCMILTTALAIKLGIAPFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLMTTYQSLNTPLMLTMGLT 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 161 SALIGGWYGLNQTQLRKIMASSSIAHLGWMAAILTLSPKLTLLTFYTYIIMTSTTFLMIKTLETNMISVMMTSWTKLPTL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 241 NTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRVSYYTTITLPPNSTNYLQQWRHKSN 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 2235261857 321 KKLYLATMTTLSITLLPITPTLLTIP 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
6.18e-151 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 428.45 E-value: 6.18e-151
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 1 MSPHTNVIIISSLIMGPLLTMSSSHWILAWTGLEINTLAIIPLIAKQHHPRAIEAATKYFLTQATASTLILFSSIMNAWT 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 81 LGQWDITQMSNDTPCMILTTALAIKLGIAPFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLMTTyQSLNTPLMLTMGLT 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQI-APTNPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 161 SALIGGWYGLNQTQLRKIMASSSIAHLGWMAAILTLSPKLTLLTFYTYIIMTSTTFLMIKTLETNMISVMMTSWTKLPTL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 241 NTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRVSYYTTITLPPNSTNYLQQWRHKSN 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*.
gi 2235261857 321 KK-LYLATMTTLSITLLPITPTLLTI 345
Cdd:MTH00135 320 QLtLPLAISTTATLMLLPLTPAILAL 345
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
8.11e-144 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 410.08 E-value: 8.11e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 1 MSPHTNVIIISSLIMGPLLTMSSSHWILAWTGLEINTLAIIPLIAKQHHPRAIEAATKYFLTQATASTLILFSSIMNAWT 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 81 LGQWDITQMSNDTPCMILTTALAIKLGIAPFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLMTTYQSLNTPLMLTMGLT 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 161 SALIGGWYGLNQTQLRKIMASSSIAHLGWMAAILTLSPKLTLLTFYTYIIMTSTTFLMIKTLETNMISVMMTSWTKLPTL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 241 NTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRVSYYTTITLPPNSTNYLQQWRHKSN 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*
gi 2235261857 321 KKLYLATMTTLSITLLPITPTLLTI 345
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
1.51e-126 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 366.48 E-value: 1.51e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 1 MSPHTNVIIISSLIMGPLLTMSSSHWILAWTGLEINTLAIIPLIAKQHHPRAIEAATKYFLTQATASTLILFSSIMNAWT 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 81 LGQWDITQMSNDTPCMILTTALAIKLGIAPFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLMTTYQSLNTPLMLTMGLT 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 161 SALIGGWYGLNQTQLRKIMASSSIAHLGWMAAILTLSPKLTLLTFYTYIIMTSTTFLMIKTLETNMISVMMTSWTKLPTL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 241 NTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRVSYYTTITLPPNSTNYLQQWRHKSN 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....*.
gi 2235261857 321 KK-LYLATMTTLSITLLPITPTLLTI 345
Cdd:MTH00105 321 KPmTLLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.11e-106 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 315.37 E-value: 2.11e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 1 MSPHTNVIIISSLIMGPLLTMSSSHWILAWTGLEINTLAIIPLIAKQHHPRAIEAATKYFLTQATASTLILFSSIMNAWT 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 81 LGQWDITQMSNDTPCMILTTALAIKLGIAPFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLMTTYQSLNTPLMLTMGLT 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 161 SALIGGWYGLNQTQLRKIMASSSIAHLGWMAAILTLSPKLTLLTFYTYIIMTSTTFLMIKTLETNMISVMMTSWTKLPTL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 241 NTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRVSYYTTITLPPNSTNYLQQWRHKSN 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 2235261857 321 KKLYLATMTTLSITLLPITPTLLTIP 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
4-339 |
1.20e-90 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 275.27 E-value: 1.20e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 4 HTNVII--ISSLIMGPLLTMSSSHWILAWTGLEINTLAIIPLIAKQHHPRAIEAATKYFLTQATASTLILFSSIMNAWTL 81
Cdd:MTH00041 2 NRNVLIflITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 82 GQWDITQMSNDTPCMILTTALAIKLGIAPFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLMTTYQSLNTPLMLTMGLTS 161
Cdd:MTH00041 82 GSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILS 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 162 ALIGGWYGLNQTQLRKIMASSSIAHLGWMAAILTLSPKLTLLTFYTYIIMTSTTFLMIKTLETNMISVMMTSWTKLPTLN 241
Cdd:MTH00041 162 VLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 242 TMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRVSYYTTITLPPNSTNYLQQWRHKSNK 321
Cdd:MTH00041 242 FLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNI 321
|
330 340
....*....|....*....|....
gi 2235261857 322 KLY------LATMTTLSITLLPIT 339
Cdd:MTH00041 322 TVYgvilsiLSSISILGLLLIPLF 345
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
5-345 |
1.08e-63 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 205.44 E-value: 1.08e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 5 TNVIIISSLIMGPLLTMSSSHWILAWTGLEINTLAIIPLIAKQHHPRAIEAATKYFLTQATASTLILFSSIMNAWtlgqw 84
Cdd:MTH00160 6 SKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML----- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 85 dITQMSNDTPCMILTTALAIKLGIAPFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLMTTyqsLNTPLMLTMGLTSALI 164
Cdd:MTH00160 81 -NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIILSAII 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 165 GGWYGLNQTQLRKIMASSSIAHLGWMAAILTLSPKLTLLTFYTYIIMTSTTFLMIKTLETNMISVMMTSWTKLPTLNTMM 244
Cdd:MTH00160 157 GAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 245 MLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRVSYYTTITLPPNSTNYLQQwrHKSNKKLY 324
Cdd:MTH00160 237 FLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKK--KKNKFSLI 314
|
330 340
....*....|....*....|.
gi 2235261857 325 LATMTTLSITLLPITPTLLTI 345
Cdd:MTH00160 315 LNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
6-302 |
2.09e-59 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 194.33 E-value: 2.09e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 6 NVIIISSLIMGPLLTMSSSHWILAWTGLEINTLAIIPLIAKQHHPRAIEAATKYFLTQATASTLILFSSIMNAWTLGQWD 85
Cdd:MTH00144 6 NLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 86 ITQMsndtpcmiLTTALAIKLGIAPFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLMTTYQSLNTPLML-TMGLTSALI 164
Cdd:MTH00144 86 SMSL--------LLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLcVISVLSALV 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 165 GGWYGLNQTQLRKIMASSSIAHLGWMAAILTLSPKLTLLTFYTYIIMTSTTFLMIKTLETNMISvMMTSWTKLPTLNTMM 244
Cdd:MTH00144 158 GSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMK-DLGSLKPSYKTGLSI 236
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 2235261857 245 MLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRVSYYTTI 302
Cdd:MTH00144 237 ISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
11-337 |
4.33e-52 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 175.35 E-value: 4.33e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 11 SSLIMGPLLTMSSSHWILAWTGLEINTLAIIPLIAKQHHPRAIEAATKYFLTQATASTLILFSSIMnawtlgQWDITQMS 90
Cdd:MTH00011 13 STMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM------MWSFPSLL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 91 NDTPCMILTTALAIKLGIAPFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLMTTYQSLNTPLMLTMGLTSALIGGWYGL 170
Cdd:MTH00011 87 KNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGM 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 171 NQTQLRKIMASSSIAHLGWMAAILTLSPKLTLLTFYTYIIMTSTTFLMIKTLETNMISVMMTSWTKLPTLNTMMMLTLMS 250
Cdd:MTH00011 167 NQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLS 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 251 LAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRVsYYTTITLPPNSTNYlqQWRHKSNKKLYLATMTT 330
Cdd:MTH00011 247 LGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNL-IFNFMYLSPTFSSL--KSAPYEPKTKILISMCT 323
|
....*..
gi 2235261857 331 LSITLLP 337
Cdd:MTH00011 324 LSLGLIP 330
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
11-302 |
1.06e-40 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 145.20 E-value: 1.06e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 11 SSLIMGPLLTMSSSHWILAWTGLEINTLAIIPLIAKQHHPRAIEAATKYFLTQATASTLILFSSIMNAWTLgqwditqMS 90
Cdd:MTH00197 5 FIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL-------YL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 91 NDTPCMILTTALAIKLGIAPFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLMTTYQSLNtpLMLTMGLTSALIGGWYGL 170
Cdd:MTH00197 78 SLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFM--GLLICSVLSSLIGGIGGM 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 171 NQTQLRKIMASSSIAHLGWMAAILTLSPKLTLLTFYTYIIMTSTTFLMIKTLETNMISVMMTSWTKLPTLNTMMMLTLMS 250
Cdd:MTH00197 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLS 235
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 2235261857 251 LAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRVSYYTTI 302
Cdd:MTH00197 236 LGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI 287
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
22-299 |
5.23e-31 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 122.15 E-value: 5.23e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 22 SSSHWILAWTGLEINTLAIIPLIA-KQHHPRAIEAATKYFLTQATASTLILF--------------SSIMNAwtlgqwdI 86
Cdd:COG1007 120 SANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgisllygatgslnlAGIAAA-------L 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 87 TQMSNDTPCMIL-----TTALAIKLGIAPFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLM----TTYQSLNTPLMLTM 157
Cdd:COG1007 193 AAGGANSPLLLLglvlvLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLrllvEAFPGLAADWQLLL 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 158 GLTSAL---IGGWYGLNQTQLRKIMASSSIAHLGWM-AAILTLSPK-LTLLTFY--TYIIMTSTTFLMIKTLETNMI-SV 229
Cdd:COG1007 273 AVLAVLsmtVGNLAALAQTNVKRMLAYSSIAHAGYLlLGLAAGTPLgVSAALFYllAYLFMNLGAFAVILLLSRKGGeAE 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2235261857 230 MMTSWTKL----PTLNTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRVSYY 299
Cdd:COG1007 353 EIEDLAGLarrsPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVKA 426
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-280 |
2.17e-28 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 111.64 E-value: 2.17e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 23 SSHWILAWTGLEINTLAIIPLIA-KQHHPRAIEAATKYFLTQATASTLILFSSIMNAWTLGQWDITQMSNDTPCMI---- 97
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 98 -------LTTALAIKLGIAPFHFWLPEVLQGT-TTMTALILTTWQKLAPL-----SLLMTTYQSLNTPLMLTMGLTSALI 164
Cdd:pfam00361 81 llllfllILVGFLFKSAQVPFHTWLPDAYEGApTPVSALLAATLVKAGGYglirrSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 165 GGWYGLNQTQLRKIMASSSIAHLGWMAAILTL----SPKLTLLTFYTYIIMTSTTFLMIKTLETNMISV-----MMTSWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAgtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTrnirdYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 2235261857 236 KLPTLNTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMAT 280
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVL 285
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
2.29e-28 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 113.20 E-value: 2.29e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 13 LIMGPLLTMSSSHWILAWTGLEINTLAIIPLIA-KQHHPRAIEAATKYFLTQATASTLILFS-------------SIMNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIAqNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 79 WTLGQWDITQMSNDTPCMILTTALAIKLGIAPFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLMTTyqSLNTPLMLTMG 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSI--GLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 159 LTSALIGGWYGLNQTQLRKIMASSSIAHLGWMAAILTL----SPKLTLLTFYTYIIMTSTTFLMIKTLET--NMISVMMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIgsfeSIQASLVYLFIYIIMSICVFSIILALNVykNLIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2235261857 233 SWTKLPTLNTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRV 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
5.38e-28 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 113.76 E-value: 5.38e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 14 IMGPLLTMSSSHWILAWTGLEINTLAIIPLIA-KQHHPRAIEAATKYFLTQATASTLILFSSIM---NAWTLGQWDITQM 89
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLlygATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 90 SNDTP---------CMILTTALAIKLGIAPFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLM----TTYQSLNT---PL 153
Cdd:PRK05777 193 LADGSgnsllllfgLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLrllvVAFGGLSEdwqQV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 154 MLTMGLTSALIGGWYGLNQTQLRKIMASSSIAHLGWM-AAILTLSPK-LTLLTFY--TYIIMTSTTFLMIKTLETNMISV 229
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlVGLAAGTAEgYSAVLFYllAYLFMTLGAFGVISLLRRKGGEA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2235261857 230 -MMTSWTKL----PTLNTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRV 296
Cdd:PRK05777 353 eSISDFAGLskrsPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-343 |
2.22e-26 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 108.88 E-value: 2.22e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 14 IMGPLLTMSSSHWILAWTGLEINTLAIIPLIA-KQHHPRAIEAATKYFLTQATASTLILF--------SSIMNAWTLGQW 84
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFgisliygfTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 85 DITQMSNDTPCMI----LTTALAIKLGIAPFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLMTTYQSL-------NTPL 153
Cdd:TIGR01770 192 LSNGMLNISLLLLgivlILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIlfgfseaWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 154 MLTMGLTSALIGGWYGLNQTQLRKIMASSSIAHLGWMAAILTLSPKLTL--LTFY--TYIIMTSTTFLMIKTL------E 223
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYifIYALMSLGAFGVLSLLrsykdeW 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 224 TNMISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRVSYYttIT 303
Cdd:TIGR01770 352 IEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVVKV--MY 429
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2235261857 304 LPPNSTNYLQQWRHKSNKKLYLatMTTLSITLLPITPTLL 343
Cdd:TIGR01770 430 FDKPERRIPSNPQSKAQSLLLS--ISALFILFLGLFPSLI 467
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-296 |
4.78e-26 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 107.54 E-value: 4.78e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 13 LIMGPLLTMSSSHWILAWTGLEINTLAIIPLIAKQHHPRAIEAATKYFLTQATASTLILFSSIMNAWTLGQWDITQMSND 92
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 93 TP----------CMILTTALAIKLGIAPFHFWLPE-----------VLQGTTTMTAL--ILTTWQKLAPLSLLMTTyqsl 149
Cdd:COG0651 196 LAeldpglllaaFALLLVGFGIKAALFPLHFWLPDaypaapspvsaLLSGLLTKVGVyaILRVLTLLFGADPALFL---- 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 150 nTPLMLTMGLTSALIGGWYGLNQTQLRKIMASSSIAHLGWMAAILTLSPKLTLLTFYTYII----MTSTTFL----MIKT 221
Cdd:COG0651 272 -GTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLnhalAKALLFLaagaIERA 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2235261857 222 LETNMISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRV 296
Cdd:COG0651 351 TGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
8-296 |
1.78e-25 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 106.25 E-value: 1.78e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 8 IIISSLIMGPLLTMSSSHWILAWTGLEINTLAIIPLIA-KQHHPRAIEAATKYFLTQATASTLILFSSIMNAWTLGQWDI 86
Cdd:MTH00199 101 ILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSI 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 87 ----TQMSNDTPCMILTTALAIKLGIAPFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLMTTyqSLNTPLMLTMGLTSA 162
Cdd:MTH00199 181 qginSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQI--GPVTNVVLICAVLSI 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 163 LIGGWYGLNQTQLRKIMASSSIAHLG---WMAAILTL-SPKLTLLTFYTYIIMTSTTFLMIKTLE--TNMISVMMTSWTK 236
Cdd:MTH00199 259 IYGAIGALNQTKIKRLLAYSGIGHMGfilFGVAIGSFeSIQASLIYMIIYVIMSICSFSIILSLKltKGLIVEVSGLSRK 338
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 237 LPTLNTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRV 296
Cdd:MTH00199 339 NPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-296 |
1.72e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 80.29 E-value: 1.72e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 15 MGPLLTMSSSHWILAWTGLEINTLAIIPLIAKQHHPRAI---------EAATKYFLTQATASTLILFS------------ 73
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGcalyfgftgneg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 74 ---SIMNAwTLGQWDITQMSNDTPCMILTTALAIKLGIAPFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLmtTYQSLN 150
Cdd:MTH00198 279 mlgTILSA-TLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILL--TSLVIT 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 151 TPLMLTMGLTSALIGGWYGLNQTQLRKIMASSSIAHLGWMAAILTLSPKLTLLTFYTYIIMTSTT----FLMIKTLET-- 224
Cdd:MTH00198 356 SKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSalasFTVICTLEEfg 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 225 --------------------NMISVMMTSWTKlPTLNTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHM-------FI 277
Cdd:MTH00198 436 trtptsrqrdgsfgnynlvrRLVDLTILSRGQ-PYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFssslsiyYL 514
|
330
....*....|....*....
gi 2235261857 278 MATSMALISLLSLFFYLRV 296
Cdd:MTH00198 515 VALFAIICTCISAFYYIRI 533
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-296 |
3.24e-14 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 73.19 E-value: 3.24e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 38 LAIIP---LIAKQHHPRAIEAATKYFLTQATASTLILFSSIMNAWTLGQW--DITQMSNDTPCMILTT--------ALAI 104
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAAPLPLTAQLllflaffiAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 105 KLGIAPFHFWLPEVLQGTTTMTALILttwqklAPLSLLMTTY-------------QSLNTPLMLTMGLTSALIGGWYGLN 171
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLL------AGVLLKMGGYgllrfalplfpeaSAYFAPLLAALGVIGIIYGALVALA 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 172 QTQLRKIMASSSIAHLGWM-AAILTLSPK-LTLLTFY--TYIIMTSTTFLMIKTLE----TNMISVMMTSWTKLPTLNTM 243
Cdd:COG1008 296 QTDLKRLIAYSSVSHMGFVlLGIFALNPLgLQGAVLQmvSHGLITAALFLLVGVLYdrthTRDIADLGGLAKRMPVLAAL 375
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 2235261857 244 MMLTLMSLAGLPPLTGFIPKWLILQELTKQH---MFIMATSMALISLLSLFFYLRV 296
Cdd:COG1008 376 FLLAALASLGLPGTSGFVGEFLVLLGAFQVNpwlAILAALGLILTAAYLLWMYQRV 431
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-299 |
9.08e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 71.83 E-value: 9.08e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 33 LEINTLAIIPLIAKQHHPRAIEAATKYFLTQATASTLILFSSIM---NAWTLGQWDITQMSN-----DTPCMILTTALAI 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLlygVTGTLNMADLAGALAenptvVTAFGFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 105 KLGIAPFHFWLPEVLQGTTT-MTALILTTWQKLAPLSLL----------MTTYQSLNTPLMLTMGLtSALIGGWYGLNQT 173
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAAPPvVTALLSGLVTKVAVYALIriyftvfggdFRFALGLGWLLAVLALL-SMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 174 QLRKIMASSSIAHLGWM---AAILTlSPKLTLLTFYT--YIIMTSTTFLMIKTLETNMISVMMTSWTKL----PTLNTMM 244
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYIllgLALLT-PLALAAGLLHLlhHALMKGALFLAAGAIEVTYGTRRLSELSGLgrrmPLTAAAF 372
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 2235261857 245 MLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRVSYY 299
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-346 |
2.78e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 70.39 E-value: 2.78e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 48 HHPRAIEAATKYFLTQATASTL------ILFSSI-------MNAWTLGQWdITQMSNDTPCMILTTALA---------IK 105
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLyflalaFLYATFgtlnmadLSAKIRGLS-FPLTGGLAGNPPLALGVAlalalwaftIK 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 106 LGIAPFHFWLPEVLQGTTTMTALIL-----------------TTWQKLAPLSLLMTTYQslntPLMLTMGLTSALIGGWY 168
Cdd:PRK12667 237 AAIFPNHFWLPDAHPAAPSPVSAMLsglvvnvgayaiirflyTIFGISPSLIDFRAALS----PILIILGAVSAIIGALM 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 169 GLNQTQLRKIMASSSIAHLGWMAAILTLSPKLTLLTFYTYII----------MTSTTFlmIKTLETNMISVMMTSWTKLP 238
Cdd:PRK12667 313 MVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIInhaiaksllfLASGVF--IHAAGTRDIDELAGLGRKMP 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 239 TLNTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRVsYYTTITLPPNSTnylqqwRHK 318
Cdd:PRK12667 391 IASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRA-WYSLFFGKPKSG------EEV 463
|
330 340
....*....|....*....|....*...
gi 2235261857 319 SNKKLYLATMTTLSITLLPITPTLLTIP 346
Cdd:PRK12667 464 EHKESPSMSVVILVLALAVLILGILALF 491
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-298 |
2.29e-12 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 67.66 E-value: 2.29e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 50 PRAIEAATKYFLTQATASTLILFSSIMNAW-TLGQWDITQMSNDTPCMILTT--------ALAIKLGIAPFHFWLPEVLQ 120
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFlGGGTFDLLELLNLPLPFGVQTwlflaffiAFAVKVPLFPLHTWLPDAHV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 121 GTTTMTALILT-TWQKLAP-------LSLLMTTYQSLnTPLMLTMGLTSALIGGWYGLNQTQLRKIMASSSIAHLGWMA- 191
Cdd:TIGR01972 232 EAPTAGSVILAgVLLKMGTygflrfnLPLFPDASLYF-APVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLl 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 192 AILTLSPKLTLLTFYTYI---IMTSTTFLMIKTLE----TNMISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFIPKW 264
Cdd:TIGR01972 311 GIFSFNELGISGAVFQMIshgLITAALFLLVGVLYerahTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
250 260 270
....*....|....*....|....*....|....*..
gi 2235261857 265 LILQELTKQH---MFIMATSMALISLLSLFFYLRVSY 298
Cdd:TIGR01972 391 LILLGSFKVNpvvAFLAALGIVLAAAYMLTLYKRVFF 427
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-319 |
1.20e-11 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 65.41 E-value: 1.20e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 51 RAIEAATKYFLTQATASTLILFS-SIMNAWTLGQWDI---------TQMSNDTPCMI----LTTALAIKLGIAPFHFWLP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGfSWLYGLSGGEIELqeivnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 117 EVLQGTTTMTALILTTWQKLAPLSL----LMTTYQSLNTPLMLTMGL---TSALIGGWYGLNQTQLRKIMASSSIAHLGW 189
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAASALatriFDIPFYFSSNEWHLLLEIlaiLSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 190 -MAAILTLSPKL---TLLTF-YTYIIMTSTTFLMIKTLE----TNMISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGF 260
Cdd:CHL00049 319 vIIGIIVGDSNDgyaSMITYmLFYIFMNLGTFACIVLFGlrtgTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGF 398
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2235261857 261 IPKWLILQELTKQHMFIMATSMALISLLSLFFYLRVSYYTTITLPPNSTNYLQQWRHKS 319
Cdd:CHL00049 399 FGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTGRNQEITPYVRNYRRSP 457
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-296 |
6.32e-11 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 63.25 E-value: 6.32e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 48 HHPRAIEAATKYFLTQATASTLILFSSIMNAWTLGQWDITQMSNDTPCMI---LTTALAI--------KLGIAPFHFWLP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILsspLLTLILLllllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 117 EVLQGTTTMTALI-----------LTTwqKLAPLSLLMTTYQSLntplMLTMGLTSALIGGWYGLNQTQLRKIMASSSIA 185
Cdd:COG1009 236 DAMEGPTPVSALLhaatmvkagvyLLA--RLSPLFALSPVWLTV----VAIIGAITALFAALIALAQTDIKRVLAYSTVS 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 186 HLGWMAAILTLSpkltLLTFYTYIIMT-----STTFLM----IKTLETNMISVMMTSWTKLPTLNTMMMLTLMSLAGLPP 256
Cdd:COG1009 310 QLGYMFLALGVG----AYVAALFHLLThaffkALLFLGagsvIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPP 385
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2235261857 257 LTGFIPKWLILQELTKQHMF-IMATSMALI-SLLSLFFYLRV 296
Cdd:COG1009 386 FAGFFSKEAILEAALEAGGLgPLLLAVALLgAFLTAFYSFRL 427
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-296 |
9.80e-11 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 62.76 E-value: 9.80e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 50 PRAIEAATKYFLTQATASTLILF-SSIMNAWTLGQWDITQMSN---DTPCMILTTAL-------AIKLGIAPFHFWLPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGSTQLSAIALaliTSPSLGLALALvfviagiAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 119 LQGTTTMTALILTTWQKLA----PLSLLMTTYQSLNTP---LMLTMGLTSALIGGWYGLNQTQLRKIMASSSIAHLGWMA 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSFDEQwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 192 AILTLSPK--LTLLTFY--TYIIMTSTTFLMIKTLE----TNMISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFIPK 263
Cdd:PRK02504 317 IGLVAGTEagYASMVFYllAYLFMNLGAFACVILFSlrtgTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
250 260 270
....*....|....*....|....*....|...
gi 2235261857 264 WLILQELTKQHMFIMATSMALISLLSLFFYLRV 296
Cdd:PRK02504 397 IYLFWAGWQAGLYLLVLVGLVTSVISIYYYIRV 429
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
98-263 |
1.11e-10 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 62.75 E-value: 1.11e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 98 LTTALAIKLGIA--------PFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLMTTYQSL-NTP----LMLTMGLTSALI 164
Cdd:PRK12650 206 LTTVVAVLIAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhDVAvwnwLLIIVGMITALM 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 165 GGWYGLNQTQLRKIMASSSIAHLGWM-AAILTLSP-KLTLLTFYT--YIIMTSTTFLMIKTLE----TNMISVMMTSWTK 236
Cdd:PRK12650 286 GAVFAVQKTDLKKLTAYSTVSQLGWIvATIGVGTPfALTAAVVHTlaHALFKSSLFMLIGVVDhqagTRDIRRLGSLWRR 365
|
170 180
....*....|....*....|....*..
gi 2235261857 237 LPTLNTMMMLTLMSLAGLPPLTGFIPK 263
Cdd:PRK12650 366 MPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-298 |
2.19e-10 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 61.94 E-value: 2.19e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 34 EINTLA---IIPLIAKqhhpRAIEAATKYFLTQATASTLILFSSIMNAWTLGQWDITQ----MSNDT-PCMILTTALAI- 104
Cdd:PRK08668 128 EIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADisqgLINDTsTGFALIVFLFLl 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 105 -----KLGIAPFHFWLPE-----------VLQGT-TTMTALILTTWQKLAPLSLL---MTTYQSLNTP--LMLTMGLTSA 162
Cdd:PRK08668 204 afgvaKAGIFPLHVWAPDayseapqsfsaVLSGQlSKLGAYGFLLVLYVLPGTKLfseFGTYRGVPLFnyILAWLGNISI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 163 LIGGWYGLNQTQLRKIMASSSIAHLGW-MAAILTLSPKLT---LLTFYTYIIMTSTTFLMIKTL----ETNMISVMMTSW 234
Cdd:PRK08668 284 IVGTLMAILQEDIKKLIAYSSVANGGYiLVGLGLGTSLGFaggLFHVFNHALFKGLFFLIFAAViyrtGTTKISEMGGLI 363
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2235261857 235 TKLPTLNTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRVSY 298
Cdd:PRK08668 364 EKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-278 |
9.17e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 59.58 E-value: 9.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 33 LEINTLAIIPLIAKQHHPRAIEAATKYFLTQATASTLILFSSIMNAWTLGQWDITQMSNDTPCMI--LTTALAIKLGIAP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEAFalIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 111 FHFWLPEVLQGTTTMTALILT-TWQKLAPLSLLMTTYQSLNTPLMLTM-GLTSALIGGWYGLNQTQLRKIMASSSIAHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSgVVVKAGVFPLVRCALDVPGLDLIVRIfGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 189 WMAAILTLSPKLTLltfyTYIIMTSTTFLMIKTLE----TNMISVMMTSWTKLPtlntmMMLTLMSLAGLPPLTGFIPKW 264
Cdd:PRK07234 283 FILAAPLVGGLYAL----AHGLVKSTLFLCAGALPsrnfTELISQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKV 353
|
250
....*....|....
gi 2235261857 265 LILQELTKQHMFIM 278
Cdd:PRK07234 354 LTLKNLLPWQAIAL 367
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
3.69e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 57.80 E-value: 3.69e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 33 LEINTLAIIPLIAKQHH-PRAIEAATKYFLTQATASTLILFSSimnAWTLGQWDITQMS------NDTPCMI-------L 98
Cdd:PRK08376 150 LEIMSIASYALVAFRNDtWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTLNMAylavkmSENPTVVakialalF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 99 TTALAIKLGIAPFHFWLPEVL-QGTTTMTALILTTwqKLAPLSLLMTTYQSLNTP---------LMLTMGLTSALIGGWY 168
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYpAAPSSISAMLLVI--KQAGLYALARVLFSIYGPainlatvgwVIIILGCLTMFVGVAM 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 169 GLNQTQLRKIMASSSIAHLGWM-----AAILTL-SPKLT----------LLTFYTYIIMTSTTFL----MIKTLETNMIS 228
Cdd:PRK08376 305 AVVQKDVKRLLAYHSVSQIGYMllglgVGLAALgDPAMAsygeialaggIYHIVNHALYKALLFLtagaVIYETGTRNLN 384
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 229 VMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMaLISLLSLFFYLRVSY 298
Cdd:PRK08376 385 ELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAM-IGSVLTLASFVKVFH 453
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
38-266 |
4.19e-09 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 57.79 E-value: 4.19e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 38 LAIIPL---IAKQHHPRAIEAATKYFLTQATASTLILFSSIMNAWTLGQWDI---TQMSNDTPC-------MILTTALAI 104
Cdd:PRK06473 138 LELIPLyllIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFdyePLRSHTLPLstqllllAPILVGFGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 105 KLGIAPFHFWLPEV-LQGTTTMTALILTTWQKLAP-------LSLLMTTYQSLnTPLMLTMGLTSALIGGWYGLNQTQLR 176
Cdd:PRK06473 218 KIPLVPFHTWLPDAhVEASTPVSVLLAGVLLKLGTygllrfgVGLFPEAWVYL-APWLATWAVVSVLYGASCAIAQKDMK 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 177 KIMASSSIAHLGWM----AAILTLSPKLTLLTFYTYIIMTSTTFLMIKTL-------ETNMISVMMTSWTKLPTLNTMMM 245
Cdd:PRK06473 297 KMVAYSSIGHMGYIllaaAAATPLSILAAVFQMISHGLISALLFLLVGVVykktgsrDVDVLRGLLNPERGLPITGSLMI 376
|
250 260
....*....|....*....|.
gi 2235261857 246 LTLMSLAGLPPLTGFIPKWLI 266
Cdd:PRK06473 377 LGVMASAGIPGMVGFIAEFLV 397
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
18-279 |
2.45e-08 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 55.32 E-value: 2.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 18 LLTMSSSHWILAWTGLEINTLAIIPLIAKQHHPRAIEAATKYFLTQATASTLILFSSI---MNA------------WTLg 82
Cdd:PRK06458 122 LLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTIlvyANAatvmgdgemailWTE- 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 83 qwdITQMSNDTPCMILTTALAI-------KLGIAPFHFWLPEV-LQGTTTMTALILTTWQKLAPLSLL---MTTYQSLNT 151
Cdd:PRK06458 201 ---LLKHASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVALYAVLryyILIDAAIGS 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 152 ----PLMLTMGLTSALIGGWYGLNQTQLRKIMASSSIAHLGWMAAILTLSPKLTLLTFYTYIIMTSTTFLMI-------- 219
Cdd:PRK06458 278 dfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIffasgnvl 357
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 220 KTLETNMISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMA 279
Cdd:PRK06458 358 QKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIA 417
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
94-325 |
4.12e-08 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 54.70 E-value: 4.12e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 94 PCMILTTALAIKLGIAPFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLMTT-----YQSLNTPLMLTMGLTSALIGGWY 168
Cdd:MTH00020 212 ICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSsplfeQAPLALIIVTIVGSLTVFFAATV 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 169 GLNQTQLRKIMASSSIAHLGWMAAILTLSPKLTLL------TFYTYIIMTSTTFLMIKTLETNMISVMMTSWTKLPTLNT 242
Cdd:MTH00020 292 GLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLfhlmnhAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYI 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 243 MMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALIS-LLSLFFYLRVSYYTTITlPPNSTNYLQQWRHKSNK 321
Cdd:MTH00020 372 FFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIYLTFLS-NTNLKKAVFFHLHEGDW 450
|
....
gi 2235261857 322 KLYL 325
Cdd:MTH00020 451 NLLL 454
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-298 |
2.05e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 52.23 E-value: 2.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 101 ALAIKLGIAPFHFWLPEV-LQGTTTMTALILTTWQKLAPLSLLMTTYQSLN------TPLMLTMGLTSALIGGWYGLNQT 173
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPlgaqnlAPAVIAMGIVGIVYGSFATCRQI 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 174 QLRKIMASSSIAHLGwMAAILTLSPKLTLLTFYTYI-----IMTSTTFLMIKTL----ETNMISVMMTSWTKLPTLNTMM 244
Cdd:MTH00226 319 DVKRLVAYSSVAHMG-LVSITLVTHDIIGLTGSIFImlahgIVSSLLFILVTILydrhHTRLIKYYRGLSITMPIWGTIM 397
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 2235261857 245 MLTLMSLAGLPPLTGFIPKWL-ILQELTKQHM--FIMATSMALISLLSLFFYLRVSY 298
Cdd:MTH00226 398 IVTSLANVAVPPSGNFIGEYLsILSSFNWNPIigVFVCSGVILSAVYSFYFANRVTF 454
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-267 |
2.57e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 52.23 E-value: 2.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 110 PFHFWLPEVLQGTTTMTA-LILTTWQK-----LAPLSLLMTTYQSLNTPLMLTMGLTsALIGGWYGLNQTQLRKIMASSS 183
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAyLHSATMVKagiylLARLNPVLGGTPLWQTILPLFGGLT-MLTGALLAVRQTDLKLILAYST 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 184 IAHLGWMAAILTLSPKLTLLTFYTYIIMTS----TTFLMIKTLE----TNMISVMMTSWTKLPTLNTMMMLTLMSLAGLP 255
Cdd:PRK12647 292 VSALGTLVMLLGLGSELAIKAAVLFLVAHSlykgALFMVAGIIDhetgTRDITKLGGLRRAMPITAAAALLAALSMAGLP 371
|
170
....*....|..
gi 2235261857 256 PLTGFIPKWLIL 267
Cdd:PRK12647 372 PLFGFLAKELIY 383
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-268 |
2.93e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 52.27 E-value: 2.93e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 111 FHFWLPEVLQGTTTMTALILTTWQKLAPLSLLMTTYQSL-NTPLMLTM----GLTSALIGGWYGLNQTQLRKIMASSSIA 185
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFeKAPLTLLIitifGALTAFFAATVGLVQNDLKKVIAYSTCS 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 186 HLGWMAAILTL--SPKLTLLTFYTYIIMTSTTFLMI------KTLETNMISVMMTSWTKLPTLNTMMMLTLMSLAGLPPL 257
Cdd:MTH00032 324 QLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLSAgsvihsTTVDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYL 403
|
170
....*....|.
gi 2235261857 258 TGFIPKWLILQ 268
Cdd:MTH00032 404 TGFYSKDLILE 414
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
78-335 |
5.84e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 50.92 E-value: 5.84e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 78 AWTLGQ--WDITQMSNDTPCMILTTALAI----KLGIAPFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLMTTYQSLN- 150
Cdd:MTH00207 159 GWTLNQghWSITNMWQTDMNNYIALSIMIaamtKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSs 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 151 ----TPLMLTMGLTSALIGGWYGLNQTQLRKIMASSSIAHLGWMAAILTLS-PKLTLLTFYTYIIMTSTTFLMIKTL--- 222
Cdd:MTH00207 239 tywfNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGmPKLALFHLITHALFKALLFVCAGSLihs 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 223 --ETNMISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRVSYYT 300
Cdd:MTH00207 319 hhHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLA 398
|
250 260 270
....*....|....*....|....*....|....*
gi 2235261857 301 TITLPPNSTNYLQQWRHKSNKKLYLATMTTLSITL 335
Cdd:MTH00207 399 VLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITS 433
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
43-296 |
1.41e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 49.82 E-value: 1.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 43 LIAKQHHPRAIEAATKYFLTQATASTLILFSSI----MNAWTLGQWDITQMSNDTPCMILTTAL--------AIKLGIAP 110
Cdd:PRK05846 150 LIGVWGGKNRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDIADLLNLPLPPGVQYWLflaffiafAVKMPMFP 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 111 FHFWLPEVLQGTTTMTALILttwqklAPLSLLMTTYQSLN-------------TPLMLTMGLTSALIGGWYGLNQTQLRK 177
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLL------AGILLKMGAYGLLRfslplfpdashefAPIIITLGVIAIIYGALVALAQTDIKK 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 178 IMASSSIAHLGW-MAAILTLSPK-LTLLTFYT--YIIMTSTTFLMIKTLETNMISVMMTS----WTKLPTLNTMMMLTLM 249
Cdd:PRK05846 304 LIAYSSISHMGFvTLGIFAGNQLgIQGAIFQMisHGLSSAALFLLVGVLYDRLHTRDIADygglAKVMPVLAAFFLFFAM 383
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2235261857 250 SLAGLPPLTGFIPKWLILQELTKQH---MFIMATSMALISLLSLFFYLRV 296
Cdd:PRK05846 384 ASLGLPGTSGFVGEFLILLGSFQVNpviAFIATTGLILAAVYSLWLYQRV 433
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
112-345 |
2.23e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 49.24 E-value: 2.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 112 HFWLPEVLQGTTTMTALILTTWQKLAPLSLLMTT-----YQSLNTPLMLTMGLTSALIGGWYGLNQTQLRKIMASSSIAH 186
Cdd:MTH00210 231 HTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSgplfeGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQ 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 187 LGWMAAILTLSPKLTLL------TFYTYIIMTSTTFLMIKTLETNMISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGF 260
Cdd:MTH00210 311 LGYMVMVCGISNYSTSLfhlmnhAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGF 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 261 IPKWLILQELTKQHMFIMATSMALIS-LLSLFFYLRVSYYTTITlPPNSTNYLQQWRHKSNKKL---------------Y 324
Cdd:MTH00210 391 YSKDLILELTYDKYYIAFAYWLGSFSaLLTAFYSIRLIYLTFIT-NTNSKKEVFIGVHESSWNItfpllllafgsifvgY 469
|
250 260
....*....|....*....|.
gi 2235261857 325 LATMTTLSITLLPITPTLLTI 345
Cdd:MTH00210 470 LGKEVVLSNVIPPIVPNSIKM 490
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
3.07e-06 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 43.79 E-value: 3.07e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2235261857 291 FFYLRVSYYTTITLPPNSTNYLQQWRHKSNKKLY-LATMTTLSITLLPITP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLlLPTLTTLSILLLPLTP 51
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-288 |
3.57e-06 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 48.67 E-value: 3.57e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 107 GIAPFHFWLPEV-LQGTTTMTALILTTWQKLAPLSLLMTTYQSLNTPL-----MLTMGLTSALIGGWYGLNQTQLRKIMA 180
Cdd:PRK08042 195 GIIPLHGWVPQAhANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 181 SSSIAHLG--------WMAAILTLSPKLTLLTF-------YTYIIMTSTTFLMIKTLETNM----ISVMMTSWTKLPTLN 241
Cdd:PRK08042 275 YHTLENIGiillglgaGVTGIALEQPALIALGLvgglyhlLNHSLFKSVLFLGAGSVWFRTghrdIEKLGGIGKKMPVIS 354
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2235261857 242 TMMMLTLMSLAGLPPLTGFIPKWLILQELtkqhmFIMATSMALISLL 288
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSF-----FKLSNSGAFVARL 396
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-296 |
4.15e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 48.19 E-value: 4.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 33 LEINTLAIIPLIAKQHHPRAIEAATKYFLTQATASTLILFSS---IMNAWTLGQWDITQMSNDTP--------CMILTTA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIgflYAITGTLNMGDMFLIIQDLPtnraiqigVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 102 LAIKLGIAPFHFWLPEV-----------LQGTTT--MTALILTTWQKLAPLSLLMTTYQSLNtpLMLTMGLTSALIGGWY 168
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAyseapsfisvfFSGTSTkvMIYLIIRIVYDVFKANFVFTTLPFNN--VFMILAALAIVFGSVL 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 169 GLNQTQLRKIMASSSIAHLGWMAAILTLSPKLTLLTFYTYII---MTSTTFLMIK-----TLETNMISVMMTSWTKLPTL 240
Cdd:PRK12662 297 AILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVnhsIVKSALFMVSgsisyHFGTTKLEDCLNLWKSMPKI 376
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 2235261857 241 NTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRV 296
Cdd:PRK12662 377 TLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
110-300 |
1.52e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 46.56 E-value: 1.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 110 PFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLMTTYQSLNTPLMLTM-----GLTSALIGGWYGLNQTQLRKIMASSSI 184
Cdd:MTH00209 193 PFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMsllllGSLTTLMASMSANVESDLKKIIALSTL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 185 AHLGWMAAILTL-SPKLTLLTFYTYIIMTSTTFL----MI-KTLETNMISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLT 258
Cdd:MTH00209 273 SQLGLMMCSLGLnQPELAFFHLITHALFKALLFIcagnIIhSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLA 352
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2235261857 259 GFIPKWLILQELTKQHMFIMATSMALISL-LSLFFYLRVSYYT 300
Cdd:MTH00209 353 GFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYSMRLSYFS 395
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
96-268 |
1.94e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 46.24 E-value: 1.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 96 MILTTALAIKLGI----APFHFWLPEVLQGTTTMTALILT-TWQKLAPLSLLMTTYQ------SLNTPLMLTMGLTSALI 164
Cdd:PRK07363 205 LILLTGLLLGFGIkiplVPLHTWLPDAYTEASPAVAILLGgVLAKLGTYGLLRFGLQlfpqtwSLVAPGLAIIGTISVIY 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 165 GGWYGLNQTQLRKIMASSSIAHLGWMAAILTLSPKLTLL-----TFYTYIIMTSTTFLM------IKTLETNMISVMMTS 233
Cdd:PRK07363 285 GALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLgavaqMISHGLILALLFHLVgiverkVGTRDLDVLNGLMNP 364
|
170 180 190
....*....|....*....|....*....|....*
gi 2235261857 234 WTKLPTLNTMMMLTLMSLAGLPPLTGFIPKWLILQ 268
Cdd:PRK07363 365 IRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
97-296 |
2.28e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 46.11 E-value: 2.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 97 ILTTALAIKLGIAPFHFWLPE-----------VLQGTTT---MTALILTTwqklaplSLLMTTyQSLNTPLMLtMGLTSA 162
Cdd:PRK12665 214 VLLVAFGIKAAVFPLSFWLPDsyptapapvtaVFAGLLTkvgVYAIIRTH-------TLLFPG-GGLDTLLMV-VALLTM 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 163 LIGGWYGLNQTQLRKIMASSSIAHLGWMAAILTLSPKLTL--LTFYT--YIIMTSTTFLMIKTLETNMISVMMTSWTKL- 237
Cdd:PRK12665 285 VVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLsgAIYYVahHITVQTTLFLVVGLIERQAGSSSLRRLGGLa 364
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2235261857 238 ---PTLNTMMMLTLMSLAGLPPLTGFIPKWLILQ---ELTKQHMFIMATSMALISLLSLFFYLRV 296
Cdd:PRK12665 365 kasPLLAVLFFVPALNLGGIPPFSGFIGKVALLEagaEDGTWLAWALVAGGVVTSLLTLYAVARV 429
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
110-275 |
4.56e-05 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 45.22 E-value: 4.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 110 PFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLMTTYQSL-NTP----LMLTMGLTSALIGGWYGLNQTQLRKIMASSSI 184
Cdd:TIGR00940 224 PFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFaGTEawfwIVGLAGLITLLWGSYFAIFQQDLKGILAFSTI 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 185 AHLGWMAAILTL-SPKLTLLTFYTYIIMTSTTFLMIKTLE--TNMISVMMTS------------------WTKLPTLNTM 243
Cdd:TIGR00940 304 SQLGLIMVLLGLgSPSYHYQGDDSKIYALAAVAAVFHLINhaTFKGSLFMAAgiidhetgtrdirklgglFHIMPITFTL 383
|
170 180 190
....*....|....*....|....*....|..
gi 2235261857 244 MMLTLMSLAGLPPLTGFIPKWLILQELTKQHM 275
Cdd:TIGR00940 384 AMIASAAMAGVPPFNGFLSKEMFFAEAITAHL 415
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-272 |
7.35e-05 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 44.75 E-value: 7.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 110 PFHFWLPEVLQGTTTMTALILTTWQKLAPLSLL-----MTTYQSLNTPLMLTMGLTSALIGGWYGLNQTQLRKIMASSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLfrftpLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 185 AHLGWMAAILTL------SPKLTLLTFYTYIIMTSTTFLM--------------IKTLETNMISVMMTSWTK--LPTLNT 242
Cdd:PRK12646 308 SQLGMIMAMVGIgggyaqHQQDAIASIYVFVLFAALFHLMnhaifkcalfmgvgIIDHEAGTRDIRILSGMRqlFPKMNL 387
|
170 180 190
....*....|....*....|....*....|
gi 2235261857 243 MMMLTLMSLAGLPPLTGFIPKWLILQELTK 272
Cdd:PRK12646 388 VMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-344 |
8.24e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 44.25 E-value: 8.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 34 EINTLAIIPLIAKQHHPRAIEAATKYFLTQATASTLILFSSIMNAWTLGQWDITQM-----SNDTPCMILTTALAIKLGI 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIhnallVNPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 109 A------PFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLMTTYQSLNTP--------LMLTMGLTSALIGGWYGLNQTQ 174
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIFKLFGGLsyfpsaqgVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 175 LRKIMASSSIAHLGWMAAILTLSPKLT----LLTFYTYIIMTSTTFLMIKTLE----TNMISVMMTSWTKLPTLNTMMML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGivagIFHAINHVIYKSALFLGAGIVSyrtkTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 247 TLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRVSYytTITLPPNSTNylQQWRHKSNKKLYLA 326
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY--LIYLKPKPEE--LEYKNKKVPKYAVF 445
|
330 340
....*....|....*....|
gi 2235261857 327 TMTTLSI--TLLPITPTLLT 344
Cdd:PRK06277 446 SLAVLTIlcIILGLFPDLVT 465
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-289 |
8.93e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 44.34 E-value: 8.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 59 YFLTQATASTLILFSSIM------NAWTLGQWDITQMSNDTPCMILTTALAIKLGIAPFHFWLPEVLQGT-TTMTALILT 131
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIvlfiqtGSFELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASpSNVSALMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 132 TWQKLAPLSLLmTTYQSLNTP------LMLTMGLTSALIGGWYGLNQTQLRKIMASSSIAHLG--------WMAAILTLS 197
Cdd:PRK08667 246 VMLKVAVYGLV-RFLMDVLSPelwwgvLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVYGL 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 198 PKLTLLTF-------YTYIIMTSTTFL----MIKTLETNMISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFIPKWLI 266
Cdd:PRK08667 325 DTLALLALggalfhsLNHALFKSLLFLtagsVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLL 404
|
250 260 270
....*....|....*....|....*....|...
gi 2235261857 267 LQE----------LTKQHMFIMATSMALISLLS 289
Cdd:PRK08667 405 YESffqsfsvadpLIKILLFSVLAIFALTSALA 437
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
105-270 |
5.12e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 41.80 E-value: 5.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 105 KLGIAPFHFWLPE-----------VLQGTTTMTAL--ILTTWQKLAPLSLLMTTYqslntpLMLTMGLTSALIGGWYGLN 171
Cdd:PRK06521 223 KAGLVPLHVWLPRahpaapshvsaLMSGVMLKVAIygILRVVFDLLGAPGWWWGV------LVLALGAISAVLGVLYALA 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 172 QTQLRKIMASSSIAHLGWM-----------------AAILTLSPKL----------TLLTFYTYIIMTSTTflmiktlET 224
Cdd:PRK06521 297 EHDLKRLLAYSTIENIGIIfvglglamvfiaygmplLAALALTAALyhllnhalfkSLLFLGAGAVLHATG-------TR 369
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 2235261857 225 NM------ISVMmtSWTKLPTLntmmmLTLMSLAGLPPLTGFIPKWLILQEL 270
Cdd:PRK06521 370 DMeklgglIRRM--PWTAWAFL-----IGCLAISALPPLNGFVSEWLLLQSL 414
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
28-188 |
6.16e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 41.56 E-value: 6.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 28 LAWtglEINTLAIIPLIAKQHHPRAIEAATKYFLTQATASTLILFSSIMNAWTLGQ--WDITQMSNDTPCMILT------ 99
Cdd:PRK12561 114 LMW---ELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALSGDTftFDLAELGAKSYPLALElllyag 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 100 --TALAIKLGIAPFHFWLPEVLQGTTTMTALILT-TWQKLAPLSLLMTTYQSLN------TPLMLTMGLTSALIGGWYGL 170
Cdd:PRK12561 191 flIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAgVLLKMGGYALIRFNVQMLPdahvyfAPALAILGVVNIIYGALNAF 270
|
170
....*....|....*...
gi 2235261857 171 NQTQLRKIMASSSIAHLG 188
Cdd:PRK12561 271 AQDNVKRRLAYSSVSHMG 288
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
27-270 |
6.42e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 41.70 E-value: 6.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 27 ILAWTGLEINTLAIIPLIAKQHHPRAIeaatkyFLTQATAST-LILFSSIMNAWTLGQWDITQMSNDTPCMILTTALAIK 105
Cdd:PRK06459 98 LAGWEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTvLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIK 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 106 LGIAPFHF--WLPE-----------VLQGTTTMTALILTtwqkLAPLSLLMTTYQSLNTPLMLTMGLTSALIGGWYGLNQ 172
Cdd:PRK06459 172 MGMMPFLVseWLPIahgnapsnfsaILSATMTLMGVYGI----LKMTILTQTIPIGYFGLTILAIGAFSILFGALYAYVS 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 173 TQLRKIMASSSIAHLGWMAAIL----------TLSPKLTLLTFYTYIIMTSTT----FLMIKTLETNMISVMMTSWTKLP 238
Cdd:PRK06459 248 ENVKGLLAFSTIENNGAILVALglymvtkqliTSIEHFSLITVILYSFAHSVAktglFLSSGLQEKQSITYSKKIRNRWI 327
|
250 260 270
....*....|....*....|....*....|..
gi 2235261857 239 TLNTMMMLtlMSLAGLPPLTGFIPKWLILQEL 270
Cdd:PRK06459 328 ELGLTLLA--SSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
34-296 |
8.08e-04 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 41.09 E-value: 8.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 34 EINTLAIIPLIAKQHHPRAIEAATKYFLTQATASTLILFSSIMNAWTLGQWD-------ITQMSNDTPCMILT----TAL 102
Cdd:PRK12663 138 EVMLIASFVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNmahiamrLNDMGDTATLTTIAllflLAF 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 103 AIKLGIAPFhFWLPEVLQG-TTTMTALILTTWQKLAPLSLL----MTTYQ--SLNTPLMLTMGLTSALIGGWYGLNQTQL 175
Cdd:PRK12663 218 GMKAALFPF-MWLPAAYHTpNTEVAALFAALLTKVGIYALIrvftLLFPQerELLHPLLATMAAITMVIGALGALAYKDI 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 176 RKIMASSSIAHLGWMAAILTLSPKLTL--LTFYTYIIMTSTTFLMIKTletnMISVMMTSWTKLPTLNTM---------- 243
Cdd:PRK12663 297 RRIAGYQVISSIGFILLGLALGTPAGIngAIFYLVHDMVVKTALFLIA----GSLVRLTGYRSLQYLGGLyrkeplfgal 372
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 2235261857 244 -MMLTLmSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRV 296
Cdd:PRK12663 373 fLILIF-AIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRI 425
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
15-300 |
8.91e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 40.92 E-value: 8.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 15 MGPLLTMSSSHWILAWTGLEINTLAIIPLIAKQHHPRAIEAATKYFLTQATASTLILFSS---IMNAWTLGQWDI-TQMS 90
Cdd:PRK06591 126 TGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIgflLSITGSLNMTDIaAYLQ 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 91 NDTPCMILTTALA-------IKLGIAPFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLM---------TTYQSLNTPLM 154
Cdd:PRK06591 206 EHTNSRIITIAIGffligaiLKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYkftyiiigyETIKTAITNFI 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 155 LTMGLTSALIGGWYGLNQTQLRKIMASSSIAHLGWMAAILTLSPKLTLLTfytyIIMTSTTflmIKTLETNMISVMMTSW 234
Cdd:PRK06591 286 RPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFLLYVTENGIIILP----SLLLADS---INKIALFLIDAYNESY 358
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2235261857 235 TKLPtLNTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRVSYYT 300
Cdd:PRK06591 359 KREP-NKVLIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYKMVLLL 423
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
28-190 |
1.30e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 40.51 E-value: 1.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 28 LAWTGLEINTLAIIPLIAKQHHPRAIEAATKYFLTQATA------STLILFSSIMNAWTLGQWDITQMSNDTPCM----- 96
Cdd:PRK08676 126 LFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNWTELAAHASLLspsvl 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 97 -----ILTTALAIKLGIAPFHFWLPEV-LQGTTTMTALILTTWQKLA-----PLSLLMTTYQSLNT--PLMLTMGLTSAL 163
Cdd:PRK08676 206 gasflFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGiygilRLSALLRQSGAAEQfsNVLIGLGIFSIA 285
|
170 180
....*....|....*....|....*..
gi 2235261857 164 IGGWYGLNQTQLRKIMASSSIAHLGWM 190
Cdd:PRK08676 286 VAAFSMLSQRNLKKLIAFSSIEHMGLM 312
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
69-311 |
2.35e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 39.55 E-value: 2.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 69 LILFSSIMNAWTLGQWDITQMSNDTPCMILTTALAIKLGIAPFHFWLPEVLQGTTTMTALILTTWQKLAPLSLLM----- 143
Cdd:MTH00211 181 MVWLLLNLNSWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIrlspl 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 144 -TTYQSLNTPLMLTMGLTSaLIGGWYGLNQTQLRKIMASSSIAHLGWMAAILTLS-PKLTLLTFYTYIIMTSTTFL---- 217
Cdd:MTH00211 261 fQNNQLILGAVLLLGALTM-LFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNqPQLAFLHICTHAFFKAMLFMcsgs 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 218 MIKTLETN-MISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHM-------FIMATSMALISLLS 289
Cdd:MTH00211 340 IIHGLNNEqDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLnawalllTLLATSLTAAYSFR 419
|
250 260
....*....|....*....|..
gi 2235261857 290 LFFYLRVSYYTTITLPPNSTNY 311
Cdd:MTH00211 420 LIFLSLGGYPRFLSLSPINENY 441
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-263 |
4.08e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 39.04 E-value: 4.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 47 QHHPRAIEAATKYFLTQATASTLILFSSIMNAWTLGQWDITQMSNDTPC--------MILTTALAIKLGIA------PFH 112
Cdd:PRK12649 155 RHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELienikghpLFLITLILIFIGAAaksaqgPFY 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 113 FWLPEVLQGTTTMTALILTTWQKLAPLSLLMTTYQSLN-TP----LMLTMGLTSALIGGWYGLNQTQLRKIMASSSIAHL 187
Cdd:PRK12649 235 IWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSgTEawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQL 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 188 GWMAAILTLS----PKLTLLTfYTYIIMTSTTFLMIKTLETNMISVMMTSWT--KLPTLNTMMMLTL-------MSLAGL 254
Cdd:PRK12649 315 AYLMTMYGYTtyhePGLGVAA-ATFHLLNHATFKACLFLVAGIVAHEAATRDirKLGGLRKEMPITFivasiaaLAMAGI 393
|
....*....
gi 2235261857 255 PPLTGFIPK 263
Cdd:PRK12649 394 PPLNGFLSK 402
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-296 |
4.14e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 38.78 E-value: 4.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 103 AIKLGIAPFHFWLPEVLQGT-TTMTAL---ILT---TWQKLAPLSLLMTTYQSLNTPLMLTMGLTSALIGGWYGLNQTQL 175
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAPpIAIAALfgaLLTkvgVYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 176 RKIMASSSIAHLGWMAAILTLSPKLTLL--TFYT--YIIMTSTTFLMIKTLE----TNMISVMMTSWTKLPTLNTMMMLT 247
Cdd:PRK07691 300 KKIIIYNIMIAVGVILVGVAMMTESGMIgaIYYLihDMIVKAALFLLIGIMIkitgTTDLKKMGGLIKRYPVLGWMFFIA 379
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 2235261857 248 LMSLAGLPPLTGFIPKWLILQELTKQHMFIMATSMALISLLSLFFYLRV 296
Cdd:PRK07691 380 ALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
101-344 |
4.35e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 38.88 E-value: 4.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 101 ALAIKLGIAPFHFWLPEV-----LQGTTTMTALILT---------TWqklaPLSLLMTTYQSlntPLMLTMGLTSALIGG 166
Cdd:MTH00217 215 SLAIKIPKIPFHIWLPQAhveapVAGSVILAGVLLKlggygfirfSW----PLLPEASEYFS---PLIQTLSLLAIIYGS 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 167 WYGLNQTQLRKIMASSSIAHL-------------GWMAAILtLSPKLTLLTFYTYIIMTsttfLMIKTLETNMISVMMTS 233
Cdd:MTH00217 288 LTTCRQVDLKRIIAYSSVAHMglvtlgifshtiqGLVAAIF-LMLAHGLVSSALFIAVT----FLYERHHTRLIKYYRGM 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 234 WTKLPTLNTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFI---MATSMALISLLSLFFYLRVSYyttitlpPNSTN 310
Cdd:MTH00217 363 VITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVgvlASLGMVLSAGYSIYLYNRVCF-------GAPSK 435
|
250 260 270
....*....|....*....|....*....|....
gi 2235261857 311 YLQQWRHKSNKKLYLATMTTLSITLLPITPTLLT 344
Cdd:MTH00217 436 YLYFSRDLNRREFYVLLPLVFLIYLMGIFPFIII 469
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
101-346 |
6.25e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 38.12 E-value: 6.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 101 ALAIKLGIAPFHFWLPEV-----LQGTTTMTALILttwqKLAPLSLLMTTYQSLN------TPLMLTMGLTSALIGGWYG 169
Cdd:MTH00204 218 SLAVKIPQIPFHIWLPQAhveapVAGSVILAGILL----KLGGYGFLRFSWPLFPaaseyfAPLIVMLSVIAVIYGSLTT 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 170 LNQTQLRKIMASSSIAHLGwmaailtlspkLTLLTFYTYII--MTSTTFLMI-----------------KTLETNMISVM 230
Cdd:MTH00204 294 CRQVDFKRLIAYSSVAHMG-----------LVPLGLFTHTIegLVAAVFLMLahgfvssalfiavtflyERHHTRLIKYY 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235261857 231 MTSWTKLPTLNTMMMLTLMSLAGLPPLTGFIPKWLILQELTKQHMFI---MATSMALISLLSLFFYLRVSYyttitlpPN 307
Cdd:MTH00204 363 RGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLgvlVTSGMVWSAAYSLYLYNRISF-------GG 435
|
250 260 270
....*....|....*....|....*....|....*....
gi 2235261857 308 STNYLQQWRHKSNKKLYLATMTTLSITLLPITPTLLTIP 346
Cdd:MTH00204 436 GSNYLLFSRDLNRRELLAILPLIIAIFLLGIVPFIIIDL 474
|
|
| |
