|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-742 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1457.02 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 1 MEHTYQYSWIIPFVPLPVPILIGVGLLLFPTETKKLRRMWAFPSILLLSIVMILSVDLSIQQINRSSIYQYVWSWTINND 80
Cdd:CHL00025 1 MEHTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINND 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 81 FYFEFGHFIDPLSSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYL 160
Cdd:CHL00025 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNNLIYNNEVHFLVVTLCAFLLFAGAVAK 240
Cdd:CHL00025 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLA 320
Cdd:CHL00025 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 321 YSTMSQLGYTMLALGMGSYRAGLFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMVLMGGLTKHVPITKTAFLL 400
Cdd:CHL00025 321 YSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 401 GTLSLCGFPPLACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLNVHFQNYSGKKSNSLYSISLWG 480
Cdd:CHL00025 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 481 KEGPKTInrnLRLLSLLTMNNKERASFFWKNTYQIDSNVKKSTFFTIPHFAAKKTFSYPHESDNTILFPMLVLGLFTLFV 560
Cdd:CHL00025 481 KEESKKI---NKLLLLLTMNNNERVSFFSKKTYKIDGNVRNMIRSFITIFGNKKTFSYPHESDNTMLFPLLVLVLFTLFV 557
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 561 GAIGIPFNQEGIDSDILSQVLTPSINLLHQNSNHFFDWYEFLTNATFSVSIAYFGIFIASFLYKPFYSSLQNLNLLNSFA 640
Cdd:CHL00025 558 GFIGIPFNQEGIDLDILSKWLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINSFV 637
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 641 KRGPKRILLDKLINLIYEWSYNRGYIDAFYTVSLTEGIKGLAELTHFFDRRVIDGITNGVGITSFFVGEGIKYVGGSRIS 720
Cdd:CHL00025 638 KGGPKRIFLDKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITSFFVGEGIKYVGGGRIS 717
|
730 740
....*....|....*....|..
gi 2248517097 721 SYLLLYLVYILIFLFIYYFLNL 742
Cdd:CHL00025 718 SYLFLYLFYVSIFLLILYFFFS 739
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-713 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 680.59 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 1 MEHTYQYSWIIPFVPLPVPILIGVGLLLFPTETKKLRRMWAFPSILLLSIVMILSVDLSIQQINRSSIYQYVWSWTINND 80
Cdd:PRK07376 1 MESAYQYAWLIPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 81 FYFEFGHFIDPLSSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYL 160
Cdd:PRK07376 81 FHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNNLIYNNEVHFLVVTLCAFLLFAGAVAK 240
Cdd:PRK07376 161 LVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLA 320
Cdd:PRK07376 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 321 YSTMSQLGYTMLALGMGSYRAGLFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMVLMGGLTKHVPITKTAFLL 400
Cdd:PRK07376 321 YSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLI 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 401 GTLSLCGFPPLACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLTFEGhlnvhfqNYSGkksnslysislwg 480
Cdd:PRK07376 401 GCLAISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEG-------EFRG------------- 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 481 kegpktinrnlrllslltmNNKE-RASFFWKNTYQIDSNVKKSTFFTIPHFAAKktfsyPHESDNTILFPMLVLGLFTLF 559
Cdd:PRK07376 461 -------------------NDKElQKELLAAADAPGHHEGHHEEHGEHHHHSGS-----PHESPWTMTLPLVVLAVPSVL 516
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 560 VGAIGIPFNqegidSDILSQVLTPSINLLHQnsnHFFDWYEFLTNATFSVSIAYFGIFIASFLYkpfyssLQNLNLLNSF 639
Cdd:PRK07376 517 IGLLGTPWN-----NRFEAFLHAPGEALEAA---AHFEWGEFLILAGASVGIALIGITLASLMY------LLKKIDPAAI 582
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2248517097 640 AKRGPKrilldklinlIYEWSYNRGYIDAFYTVSLTEGIKGLAELTHFFDRRVIDGITNGVGITSFFVGEGIKY 713
Cdd:PRK07376 583 AERFPP----------LYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTGLVTLGSGEGLKY 646
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
5-714 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 535.50 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 5 YQYSWIIPFVPLpvpiligVGLLLFPTETKKLRRMWAF-PSILLLSIVMILSVdLSIQQINRSSIYQYVWSWTINNDFYF 83
Cdd:COG1009 1 LQLLWLIPLLPL-------LGALLAGLLGRRLGRRAAGwLAALAPLAAFVLSL-LLFPAVLGGEVVVELYTWIPVGSLGL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 84 EFGHFIDPLSSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIG 163
Cdd:COG1009 73 DFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 164 FWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNNLIynnevHFLVVTLCAFLLFAGAVAKSAQ 243
Cdd:COG1009 153 FWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIL-----SSPLLTLILLLLLLGAFGKSAQ 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYST 323
Cdd:COG1009 228 FPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYST 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 324 MSQLGYTMLALGMGSYRAGLFHLITHAYSKALLFLGSGSIIHSMEaivgyspdkSQNMVLMGGLTKHVPITKTAFLLGTL 403
Cdd:COG1009 308 VSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGAL 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 404 SLCGFPPLACFWSKDEILNDSW---LYSPIFAIIACSTAGLTAFYMFRIYLLTFeghlnvhfqnysgkksnslysislWG 480
Cdd:COG1009 379 SLAGIPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVF------------------------FG 434
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 481 KEGPktinrnlrllslltmnnkerasffwkntyqidsnvkkstfftiphfaakKTFSYPHESDNTILFPMLVLGLFTLFV 560
Cdd:COG1009 435 KPRP-------------------------------------------------KTPKHPHESPWLMTLPLVVLAVLSLVL 465
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 561 GAIGIPFNQEGIDSDilsQVLTPSINLLHQnsnhffdwyEFLTNATFSVSIAyfGIFIASFLYkpfysslqnlnllnsfa 640
Cdd:COG1009 466 GLLLPGLLEGLLAPA---AVLGGELHLAHG---------LLLNALPLLLSLL--GIALGYLLY----------------- 514
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2248517097 641 KRGPKRILLDKLiNLIYEWSYNRGYIDAFYTVSLTEGIKGLAELThFFDRRVIDGITNGVGITSFFVGEGIKYV 714
Cdd:COG1009 515 LKRPLPALAERL-KPLYRLLANKWYFDELYDALFVKPVRALARFL-WFDRYVIDGIVNGLARLTLFSGRLLRRL 586
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
7-701 |
3.58e-177 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 520.87 E-value: 3.58e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 7 YSWIIPFVPLPVPILIGVGLllfptetKKLRRMWA-FPSILLLSIVMILSVDLSIQQINRS--SIYQYVWSWTINNDFYF 83
Cdd:PRK06590 4 LLWLIVLLPLIGALILGLFG-------RRIGEKWAhLVGTGLVGLSALLSLVVFFDFLLGGgrAFSQTLWTWISVGDFDV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 84 EFGHFIDPLSSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIG 163
Cdd:PRK06590 77 DFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 164 FWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNNLIynnEVHFLVVTLCAFLLFAGAVAKSAQ 243
Cdd:PRK06590 157 FWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVFAAAPQFF---GLGWSALTLICLLLFIGAMGKSAQ 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYST 323
Cdd:PRK06590 234 FPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYST 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 324 MSQLGYTMLALGMGSYRAGLFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVLMGGLTKHVPITKTAFLLGTL 403
Cdd:PRK06590 314 MSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRKMGGLRKKMPVTYATFLIGTL 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 404 SLCGFPPLACFWSKDEILNDSWLYSPIFA-IIACSTAGLTAFYMFRIYLLTFEGhlnvhfqnysgkksnslysislwgke 482
Cdd:PRK06590 386 ALIGIPPFAGFFSKDEILEAAFANGHINLfVAGLVGAFLTAFYSFRLIFLVFHG-------------------------- 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 483 gpktinrnlrllslltmnnkerasffwkntyqidsnvkkstfftiphfAAKKTFSYPHESDNTILFPMLVLGLFTLFVGA 562
Cdd:PRK06590 440 ------------------------------------------------KEKEKIHHPHESPAVMTLPLIVLAVLSVFAGA 471
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 563 IGIPFnqegidsdiLSQVLTPSINLLHQNSNHffdwYEFLTNATFSVSIAYFGIFIASFLYkpfyssLQNLNLLNSFAKR 642
Cdd:PRK06590 472 LIVPP---------FLGVLPLTTELAHGEAEH----HLPVWVALLPLVVALAGIALAWLLY------LKKPTLPTSIAAP 532
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*....
gi 2248517097 643 GPkrilldklinLIYEWSYNRGYIDAFYTVSLtegIKGLAELTHFFDRRVIDGITNGVG 701
Cdd:PRK06590 533 GR----------FLYTLLRNKYYFDELYEKVF---VKPGLALARLLWKDGDDGIIDGLV 578
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
44-708 |
5.67e-154 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 460.98 E-value: 5.67e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 44 SILLLSIVMILSVDLSIQQINRSS---IYQYVWSWTINNDFYFEFGHFIDPLSSIMSILITTVGILVLIYSDNYMSHDQG 120
Cdd:TIGR01974 33 GIGSVGLSAALSAFVFVDFFLNGEgeaFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEG 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 121 YLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWIT 200
Cdd:TIGR01974 113 YSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYF 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 201 GSFEFQDLFEIVNNliynneVHFLVVTLCAFLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 280
Cdd:TIGR01974 193 GTLNFQEVFALAPG------AFFSALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVART 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 281 LPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSYRAGLFHLITHAYSKALLFLGS 360
Cdd:TIGR01974 267 SPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGA 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 361 GSIIHSMEaivgyspdKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEILNDSW--LYSPIFAIIACST 438
Cdd:TIGR01974 347 GSVIHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIG 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 439 AGLTAFYMFRIYLLTFEGhlnvhfqnysgkksnslysislwgkegpktinrnlrllslltmnnKERASffwkntyqidsn 518
Cdd:TIGR01974 419 AFLTAFYSFRLIFMVFHG---------------------------------------------KERHE------------ 441
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 519 vkkstfftiphfaakkTFSYPHESDNTILFPMLVLGLFTLFVGAIGIPFnqegidSDILSQVLtPSINLLHQNSNHFFDW 598
Cdd:TIGR01974 442 ----------------ADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPL------FEFLKGVL-PTSAEPALEHHHVPAL 498
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 599 yefLTNATFSVSIAyfGIFIASFLYkpfyssLQNLNLLNSFAKRGPKrilldklinlIYEWSYNRGYIDAFYTVSLTEGI 678
Cdd:TIGR01974 499 ---EIWSPTAVAIL--GILLAYLLY------LGNPTLPAKIAQRHSG----------LYRLLLNKWYFDELYDKVFVKPY 557
|
650 660 670
....*....|....*....|....*....|.
gi 2248517097 679 KGLAELTHFF-DRRVIDGITNGVGITSFFVG 708
Cdd:TIGR01974 558 LFLGKLLWKDpDDKIIDGFGPGIARLVGAIS 588
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
448-689 |
7.40e-149 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 433.96 E-value: 7.40e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 448 RIYLLTFEGHLNVHFQNYSGKKSNSLYSISLWGKEGPKTINRNLRLLSLLTMNNKERASFFWKNTYQIDSNVKKST--FF 525
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTLLLLTMNNNEKVSFFSKKTYRIDGNVRNMTrpFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 526 TIPHFAAKKTFSYPHESDNTILFPMLVLGLFTLFVGAIGIPFNQEGIDSDILSQVLTPSINLLHQNSNHFFDWYEFLTNA 605
Cdd:pfam01010 81 TITHFDNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNSNNSVDWYEFVTNA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 606 TFSVSIAYFGIFIASFLYKPFYSSLQNLNLLNSFAKRGPKRILLDKLINLIYEWSYNRGYIDAFYTVSLTEGIKGLAELT 685
Cdd:pfam01010 161 IFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLAELT 240
|
....
gi 2248517097 686 HFFD 689
Cdd:pfam01010 241 HFFD 244
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
46-454 |
5.40e-104 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 331.27 E-value: 5.40e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 46 LLLSIVMILSVDLSI-----QQINRSSIYQYVWSWTINNDFYFEFGHFIDPLSSIMSILITTVGILVLIYSDNYMSHDQG 120
Cdd:MTH00020 30 ILTSSCLIISLSWSFlifyeILFNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPH 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 121 YLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWIT 200
Cdd:MTH00020 110 IPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRF 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 201 GSFEFQDLFEIVNNLIYNNevhflvVTLCAFLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 280
Cdd:MTH00020 190 GSLDFSSVFNMVVSAPSSD------ITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRS 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 281 LPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSYRAGLFHLITHAYSKALLFLGS 360
Cdd:MTH00020 264 SPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSA 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 361 GSIIHSMeaivgyspDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEILNDSWL-YSPIFAI-IACST 438
Cdd:MTH00020 344 GSVIHAL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGqYYLIFAYwLGCFS 415
|
410
....*....|....*.
gi 2248517097 439 AGLTAFYMFRIYLLTF 454
Cdd:MTH00020 416 ALLTAFYSIRLIYLTF 431
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
63-474 |
8.49e-104 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 330.82 E-value: 8.49e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 63 INRSSIYQYVWSWTINNDFYFEFGHFIDPLSSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSS 142
Cdd:MTH00210 52 LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 143 NLIQIYIFWELVGLCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNNLIYNNEVh 222
Cdd:MTH00210 132 NYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESL- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 223 flvvTLCAFLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIIIPYIMNLISLIGIITV 302
Cdd:MTH00210 211 ----TIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 303 LLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSYRAGLFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMV 382
Cdd:MTH00210 287 FFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV--------SDEQDMR 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 383 LMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEILNDSW-LYSPIFAI-IACSTAGLTAFYMFRIYLLTFEGHLNV 460
Cdd:MTH00210 359 KMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdKYYIAFAYwLGSFSALLTAFYSIRLIYLTFITNTNS 438
|
410
....*....|....
gi 2248517097 461 HFQNYSGKKSNSLY 474
Cdd:MTH00210 439 KKEVFIGVHESSWN 452
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
20-460 |
5.32e-84 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 277.99 E-value: 5.32e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 20 ILIGVGLLLFPTETKKLRRMWAFPSILLLSIVMILsvdLSIQQINRSSIYQyvWSWTINNDFYFEFGHFIDPLSSIMSIL 99
Cdd:MTH00211 13 LILLLLPLLLPLNNSKLHIKKAVKLSFFISLIPLL---IFLDQGLETILTN--WSWINLGLFSLNLSFKFDFYSIFFTSV 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 100 ITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPIAANACQKAF 179
Cdd:MTH00211 88 ALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 180 VTNRVGDFGLLLGILGLYWITGSFEFQDLFeivnnliynneVHFLVVTLCAFLLFAGAVAKSAQFPLHVWLPDAMEGPTP 259
Cdd:MTH00211 168 IYNRIGDIGLLLSMVWLLLNLNSWEISQLF-----------ILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 260 ISALIHAATMVAAGIFLVARLLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSY 339
Cdd:MTH00211 237 VSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQP 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 340 RAGLFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDE 419
Cdd:MTH00211 317 QLAFLHICTHAFFKAMLFMCSGSIIHGL--------NNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDL 388
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 2248517097 420 IL---NDSWLYSPIFAIIACSTaGLTAFYMFRIYLLTFEGHLNV 460
Cdd:MTH00211 389 ILesmNGSYLNAWALLLTLLAT-SLTAAYSFRLIFLSLGGYPRF 431
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
6-713 |
1.64e-81 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 271.78 E-value: 1.64e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 6 QYSWIIPFVPLpvpilIGvGLLLFPTETKKLRRMWAFPSI---LLLSIVMILSVDLSIQQINRSSIYQYVWSWTINNDFY 82
Cdd:PRK07390 7 QTSWLIPLYGL-----IG-ALLSLPWSPGIIRRTGPRPAAylnLLMTLLAFVHSLLALRAIWNQPPQQLSFPWLQVADLD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 83 FEFGHFIDPLSSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLI 162
Cdd:PRK07390 81 LSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 163 GFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNnliyNNEVHFLVVTLCAFLLFAGAVAKSA 242
Cdd:PRK07390 161 GFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAA----TANLDPLTATLLGLALIAGPTGKCA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 243 QFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYS 322
Cdd:PRK07390 237 QFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYS 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 323 TMSQLGYTMLALGMGSYRAGLFHLITHAYSKALLFLGSGSIIHSmeaivgyspDKSQNMVLMGGLTKHVPITKTAFLLGT 402
Cdd:PRK07390 316 TSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT---------TITQDLTELGGLWSRMPATTLAFLVGS 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 403 LSLCGFPPLACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLTFeghlnvhfqnysgkksnslysislWGKE 482
Cdd:PRK07390 387 AGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVF------------------------LGKP 442
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 483 GPKTinrnlrllslltmnnkERA-SFFWkntyqidsnvkkstfftiphfaakktfsyphesdnTILFPMLVLGLFTLFVg 561
Cdd:PRK07390 443 QQKT----------------RRSpEVLW-----------------------------------PMALPMVILAGFTLHL- 470
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 562 aigiPFnqegidsdILSQvltpsINLLhqnsnhfFDWYEFLTNATFSVSIA-YFGIFIASFLYkpfysslqnLNLLNSFA 640
Cdd:PRK07390 471 ----PL--------LLQQ-----WGLL-------PSWEALNLWAAPLLVASgLLGVLLGAWIY---------LNKAWSRP 517
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2248517097 641 KRGPKRILLDKLINLIyewsynrgYIDAFYTVSLTEGIKGLAELTHFFDRRVIDGITNGVGITSFFVGEGIKY 713
Cdd:PRK07390 518 IQLPLRFLQDLLAYDF--------YTDRLYRLTIVFVVALISRLTAWFDRYVVDGLVNLVGLATLFSGQGLKY 582
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
63-421 |
3.53e-80 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 269.91 E-value: 3.53e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 63 INRSSIYQYVWSWTINNDFYFEFGHFIDPLSSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSS 142
Cdd:MTH00032 52 INDAVVHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 143 NLIQIYIFWELVGLCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDL---------FEIVN 213
Cdd:MTH00032 132 NYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgsgiMDRGY 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 214 NLIYNNEVHFLVVTLCAFLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIIIPYIMNL 293
Cdd:MTH00032 212 YGGGAYESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLI 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 294 ISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGM-GSYRAGLFHLITHAYSKALLFLGSGSIIHSMEAivg 372
Cdd:MTH00032 292 ITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV--- 368
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2248517097 373 yspdKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEIL 421
Cdd:MTH00032 369 ----DEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
141-440 |
9.78e-79 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 254.16 E-value: 9.78e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 141 SSNLIQIYIFWELVGLCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNNLIYNNE 220
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 221 vhflvVTLCAFLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFII-IPYIMNLISLIG 298
Cdd:pfam00361 81 -----LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPsSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 299 IITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMG---SYRAGLFHLITHAYSKALLFLGSGSIIHSMEaivgysp 375
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV------- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2248517097 376 dKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEILNDSWLYSPIFAIIACSTAG 440
Cdd:pfam00361 228 -HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
44-454 |
1.03e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 251.43 E-value: 1.03e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 44 SILLLSIVMILSVDLSIQQINRS--SIYQYVWSWTINNDFYFEFGHFIDplssIMSILITTVGILV----LIYSDNYMSH 117
Cdd:MTH00208 58 SISLLKTLAFLSLINLLIWILLGcpNINISLSNWLSNTLFNFSLSFIFD----FYFILFFSVALFVtwsiIEFSHYYMSN 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 118 DQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLY 197
Cdd:MTH00208 134 DPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 198 WITGSFEfqdlfeiVNNLIYNNEVHFLVVTLCAFLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLV 277
Cdd:MTH00208 214 INFNSWN-------LNEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 278 ARLLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSYRAGLFHLITHAYSKALLF 357
Cdd:MTH00208 287 IRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLF 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 358 LGSGSIIHSMeaivgyspDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEIL-----NDSWLYSPIFA 432
Cdd:MTH00208 367 LCSGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILeaglaSISNLLSIILA 438
|
410 420
....*....|....*....|..
gi 2248517097 433 IIACStagLTAFYMFRIYLLTF 454
Cdd:MTH00208 439 LIATL---LTAVYSFRIIFFCF 457
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
11-450 |
5.65e-73 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 243.52 E-value: 5.65e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 11 IPFVPLPVPILIGVGLLLFPtetKKLRRMWAFpSILLLSIVMILSVDLSIQQINRSSIYQYVWSWTINNDFYFEfghfID 90
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLG---RRRRLQRAL-SLLASLALLALALALLLQVLAGGPLVYALGGWPAPFGIVLV----AD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 91 PLSSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPi 170
Cdd:COG0651 76 RLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 171 AANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVnnliynNEVHFLVVTLCAFLLFAGAVAKSAQFPLHVWL 250
Cdd:COG0651 155 ALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARL------AELDPGLLLAAFALLLVGFGIKAALFPLHFWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 251 PDAM-EGPTPISALIHAAtMVAAGIFLVARLLPLFI---IIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQ 326
Cdd:COG0651 229 PDAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLFgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 327 LGYTMLALGMGSYR---AGLFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVLMGGLTKHVPITKTAFLLGTL 403
Cdd:COG0651 308 IGYILLGLGLGTPLglaGALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIGAL 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 2248517097 404 SLCGFPPLACFWSKDEILN---DSWLYSPIFAIIACStaGLTAFYMFRIY 450
Cdd:COG0651 379 ALAGLPPLSGFVSKWLLLQaalEAGAWLLAAVLLLSS--LLTLAYFVRIF 426
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
114-457 |
5.68e-72 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 245.84 E-value: 5.68e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 114 YMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGI 193
Cdd:MTH00004 107 YMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSM 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 194 LGLYWITGSFEFQDLFeivnnliYNNEVHflvvTLCAFLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAG 273
Cdd:MTH00004 187 AWLAMTLNTWEIQQLF-------SPTQTP----TLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAG 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 274 IFLVARLLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSYRAGLFHLITHAYSK 353
Cdd:MTH00004 256 IFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFK 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 354 ALLFLGSGSIIHSMeaivgyspDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKD---EILNDSWLYSPI 430
Cdd:MTH00004 336 AMLFLCSGSIIHNL--------NNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDtiiETLNTSYLNAWA 407
|
330 340
....*....|....*....|....*..
gi 2248517097 431 FAIIACSTAgLTAFYMFRIYLLTFEGH 457
Cdd:MTH00004 408 LLLTLLATS-FTAAYSLRMILLVQTGF 433
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
97-449 |
9.45e-72 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 245.20 E-value: 9.45e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 97 SILITTVGILV----LIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPIAA 172
Cdd:MTH00066 84 SIIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADAN 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 173 NACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFeivnnLIYNNEVHFLVvtlcAFLLfaGAVAKSAQFPLHVWLPD 252
Cdd:MTH00066 164 TAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIF-----LLNDNSTLPLL----GLIL--AAAGKSAQFGLHPWLPA 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 253 AMEGPTPISALIHAATMVAAGIFLVARLLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTML 332
Cdd:MTH00066 233 AMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMV 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 333 ALGMGSYRAGLFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLA 412
Cdd:MTH00066 313 TIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLA 384
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2248517097 413 CFWSKDEI---LNDSWL--YSPIFAIIACStagLTAFYMFRI 449
Cdd:MTH00066 385 GFFSKDAIieaMNTSNLnsWALILTLIATS---FTAVYSFRI 423
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
85-452 |
5.98e-70 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 244.06 E-value: 5.98e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 85 FGHFIDPLSSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGF 164
Cdd:PRK12647 58 LSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 165 WFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIvNNLIYNNEVHFLVVtlcaFLLFAGAVAKSAQF 244
Cdd:PRK12647 138 NHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLAS-GDVIREHPLYLAIL----LLVLGGAFTKSAQF 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTM 324
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTV 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 325 SQLGYTMLALGMGS---YRAGLFHLITHAYSKALLFLGSGSIIHSmeaiVGyspdkSQNMVLMGGLTKHVPITKTAFLLG 401
Cdd:PRK12647 293 SALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE----TG-----TRDITKLGGLRRAMPITAAAALLA 363
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 2248517097 402 TLSLCGFPPLACFWSKDEILnDSWLYSPIFAIIACSTAGLTAFYMFRIYLL 452
Cdd:PRK12647 364 ALSMAGLPPLFGFLAKELIY-EALLEAPLWSLILTVAAVLGNALMVAVAFL 413
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
73-449 |
4.96e-67 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 232.80 E-value: 4.96e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 73 WSW----TINNDFYFEFGHFidplssimSILITTVGILV----LIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSSNL 144
Cdd:MTH00137 70 WNWmntlTFDINISFKFDHY--------SIIFTPIALYVtwsiLEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNM 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 145 IQIYIFWELVGLCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILglyWI---TGSFEFQDLFEIVNNLiynnev 221
Cdd:MTH00137 142 FQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMA---WMatnLNSWEIQQIFALSKDF------ 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 222 hflVVTLCAFLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIIIPYIMNLISLIGIIT 301
Cdd:MTH00137 213 ---DLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALT 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 302 VLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSYRAGLFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNM 381
Cdd:MTH00137 290 TLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSL--------NDEQDI 361
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2248517097 382 VLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEI---LNDSWL--YSPIFAIIACStagLTAFYMFRI 449
Cdd:MTH00137 362 RKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLnaWALTLTLIATS---FTAVYSLRV 431
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
22-449 |
1.73e-66 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 227.93 E-value: 1.73e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 22 IGVGLLLFPTETKKLRrmWAFPSILLLSIVMILSVDLSIQQINRSSIYQYVWSWTINNdfyfEFGHFIDPLSSIMSILIT 101
Cdd:PRK06525 12 FIGALVVFFLPGRRAA--ELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNLGDVA----LFGLVIDPVSVLIGFVVV 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 102 TVGILVLIYSDNYMS-------HDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTrPIAANA 174
Cdd:PRK06525 86 LLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQS-PKALRS 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 175 CQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIvnnliyNNEVHFLVVtlcAFLLFAgAVAKSAQFPLHVWLPDAM 254
Cdd:PRK06525 165 ALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGL------HGSLKYLVF---LGILFA-AWGKSAQLPFYSWLPDAM 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 255 EGPTPISALIHAATMVAAGIFLVARLL----PLFIIIPYIMnliSLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYT 330
Cdd:PRK06525 235 EAPTPASAYLHAASMVKVGVYIFARAIqsmgPIPHVIGYVG---AVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYM 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 331 MLALGMGSY------RAGLFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVLMGGLTKHVPITKTAFLLGTLS 404
Cdd:PRK06525 312 FFGLSLAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSC---------GTRLLPRLRGVLKKLPLVGVGFCVAALA 382
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 2248517097 405 LCGFPPLACFWSKDEIL-------NDSWLYSPIFAIIACSTAGLTAFYMFRI 449
Cdd:PRK06525 383 ITGVPPFNGFFSKFPIFaagfelsVEYWILLPAMVLLLIESVASFAWFLRWF 434
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
85-417 |
1.34e-65 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 232.51 E-value: 1.34e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 85 FGHFIDPLSSIMSILITTVGILVLIYSDNYMSHDQGYL-RFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIG 163
Cdd:PRK12645 72 FTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLIS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 164 FWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNnlIYNNEVHFLVVTLcafLLFAGAVAKSAQ 243
Cdd:PRK12645 152 YWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANAD--EIQNSPLFIPAMI---LILLGAFTKSAQ 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYST 323
Cdd:PRK12645 227 FPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFST 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 324 MSQLGYTMLALGMGS----------------YRAGLFHLITHAYSKALLFLGSGSIIHSmeaiVGyspdkSQNMVLMGGL 387
Cdd:PRK12645 307 VSQLGLIMSLLGIGAaslhyqgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHE----TG-----TRDIRKLGGL 377
|
330 340 350
....*....|....*....|....*....|
gi 2248517097 388 TKHVPITKTAFLLGTLSLCGFPPLACFWSK 417
Cdd:PRK12645 378 MTIMPITFTIALIGALSMAGLPPFNGFLSK 407
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
114-457 |
1.36e-65 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 228.58 E-value: 1.36e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 114 YMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGI 193
Cdd:MTH00108 107 YMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAM 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 194 LGLYWITGSFEFQDLFEIVNNLiynnevhfLVVTLCAFLLfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAG 273
Cdd:MTH00108 187 AWFLLNLNSWDLQQIFMLNPNN--------SNLPLMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAG 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 274 IFLVARLLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSYRAGLFHLITHAYSK 353
Cdd:MTH00108 257 VFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFK 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 354 ALLFLGSGSIIHSMeaivgyspDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKD---EILNDSwlYSPI 430
Cdd:MTH00108 337 AMLFMCSGSIIHNL--------NDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDliiEAANTS--YTNA 406
|
330 340 350
....*....|....*....|....*....|.
gi 2248517097 431 FA----IIACStagLTAFYMFRIYLLTFEGH 457
Cdd:MTH00108 407 WAllitLIATS---LTAAYSTRIIFFALLGQ 434
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
85-456 |
2.49e-65 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 231.66 E-value: 2.49e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 85 FGHFIDPLSSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGF 164
Cdd:TIGR00940 69 FTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISY 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 165 WFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNNLIynNEVHFLVVTLcafLLFAGAVAKSAQF 244
Cdd:TIGR00940 149 WHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAIR--NSPLFGTAMV---LVLLGAFTKSAQF 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTM 324
Cdd:TIGR00940 224 PFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 325 SQLGYTMLALGMGS----------------YRAGLFHLITHAYSKALLFLGSGSIIHSmeaivgyspDKSQNMVLMGGLT 388
Cdd:TIGR00940 304 SQLGLIMVLLGLGSpsyhyqgddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHE---------TGTRDIRKLGGLF 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 389 KHVPITKTAFLLGTLSLCGFPPLACFWSKDEILN-------------DSWLYspIFAIIACSTAGLTAFYMFRIYLLTFE 455
Cdd:TIGR00940 375 HIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAeaitahlvnpfdtVTLGY--LFPYVATVASVFTFVYSLRFIHGVFF 452
|
.
gi 2248517097 456 G 456
Cdd:TIGR00940 453 G 453
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
88-435 |
6.74e-63 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 226.99 E-value: 6.74e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 88 FIDPLSSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFT 167
Cdd:PRK12648 73 RLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHH 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 168 RPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEiVNNLIYNNEVHflVVTLCAFLLfaGAVAKSAQFPLH 247
Cdd:PRK12648 153 RADARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVVLA-AGDLIRAHPLY--PPALVLILL--GAFTKSAQFPFH 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 248 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQL 327
Cdd:PRK12648 228 FWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHL 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 328 GY-TMLaLGMGS---YRAGLFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNMVLMGGLTKHVPITKTAFLLGTL 403
Cdd:PRK12648 308 GLiTLL-LGLGSplaAVAAIFHIINHATFKASLFMAAGIIDH--ET-------GTRDMRRLSGLRRLMPITATLAMVAAA 377
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2248517097 404 SLCGFPPLACFWSK----DEILNDSWLYS-----PIFAIIA 435
Cdd:PRK12648 378 AMAGVPLLNGFLSKemffAETLDTHLLGSldwllPVAATLA 418
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
84-418 |
4.25e-61 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 219.70 E-value: 4.25e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 84 EFGHFIDPLSSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIG 163
Cdd:PRK12649 73 EFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 164 FWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLF---EIVNNLiynNEVHFLVVTLcaFLLFAGAVAK 240
Cdd:PRK12649 153 YWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILqdsELIENI---KGHPLFLITL--ILIFIGAAAK 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLA 320
Cdd:PRK12649 228 SAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILA 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 321 YSTMSQLGYTMLALGMGSYR-------AGLFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNMVLMGGLTKHVPI 393
Cdd:PRK12649 308 YSTISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAH--EA-------ATRDIRKLGGLRKEMPI 378
|
330 340
....*....|....*....|....*
gi 2248517097 394 TKTAFLLGTLSLCGFPPLACFWSKD 418
Cdd:PRK12649 379 TFIVASIAALAMAGIPPLNGFLSKE 403
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
71-448 |
4.28e-61 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 222.11 E-value: 4.28e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 71 YVWSWT----INNDFYFefghfiDPLSSIMSILITTVGILVLIYSDNYMSHDQGYL-RFFAYMSFFNSSMLGLVTSSNLI 145
Cdd:PRK12644 56 EVVPWIpslgLDLAFRL------DALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLL 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 146 QIYIFWELVGLCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNNLIYnnevhflv 225
Cdd:PRK12644 130 LLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLADPPTGPA-------- 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 226 VTLCAFLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIIIPYIMNLISLIGIITVLLG 305
Cdd:PRK12644 202 VSVAVVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLG 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 306 ATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSYR---AGLFHLITHAYSKALLFLGSGSIIHSmeaiVGyspdkSQNMV 382
Cdd:PRK12644 282 GWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDaalAGLAMLLAHALFKAALFLVVGIIDHS----TG-----TRDIR 352
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2248517097 383 LMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSK----DEILNDSWLYSPIFAIIACSTAG--LTAFYMFR 448
Cdd:PRK12644 353 KLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKeaalEAVLHDGALGPAGPVVLAGIVLGsiLTVAYSLR 424
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
21-459 |
4.84e-59 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 214.23 E-value: 4.84e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 21 LIGVGLLLFPTETKKLRRMWAFPSILLLSIVMILSVDLSIQQINRSSIYQYVWSWTINNDFYFEFGhfIDPLSSIMSILI 100
Cdd:PRK12646 10 ILVIMAMILLTSKRRALAKYAGYIALVAPIISSIYFLIQIPSVAKLQYLSTSIPWMKTLDINLDLR--LDGLSLMFSLII 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 101 TTVGILVLIYSDNYMSHDQGYL-RFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPIAANACQKAF 179
Cdd:PRK12646 88 SLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSF 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 180 VTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNNLIYNNEVHFLVvtlcaFLLFAGAVAKSAQFPLHVWLPDAMEGPTP 259
Cdd:PRK12646 168 MITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPMI-----FMFLLGAFTKSAQFPFHIWLPRAMAAPTP 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 260 ISALIHAATMVAAGIFLVARLLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMG-- 337
Cdd:PRK12646 243 VSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGgg 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 338 ---------------SYRAGLFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVLMGGLTKHVPITKTAFLLGT 402
Cdd:PRK12646 323 yaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHEA---------GTRDIRILSGMRQLFPKMNLVMTIAA 393
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2248517097 403 LSLCGFPPLACFWSKD----------EILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLN 459
Cdd:PRK12646 394 LSMAGVPFLNGFLSKEmfldaltqtgQLSQFSLISMIIIVFIGVIASIFTFTYALYMVKEVFWGKYD 460
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
44-474 |
5.83e-56 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 201.22 E-value: 5.83e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 44 SILLLSIVMILSVDLSIQQINRSSiyqYVWSWTINN----DFYFEFghFIDPLSSIMSILITTVGILVLIYSDNYMSHDQ 119
Cdd:MTH00151 8 SFLLFSYSVFLFPLLGYFGLNGIS---LIFEWELLSvsscSFSFEL--VLDWVSLSFSGVVCLISGCVFLFSSSYMSEDP 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 120 GYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPIAANACQKAFvTNRVGDFGLLLGilglywi 199
Cdd:MTH00151 83 FLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDVLILLS------- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 200 TGSFEFQDLFeivnNLIYNNEVHFLVvtLCAFLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR 279
Cdd:MTH00151 155 IALLVLLGHW----SILSMWDFKLSG--WLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIR 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 280 LLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSYRAGLFHLITHAYSKALLFLG 359
Cdd:MTH00151 229 FFPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLC 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 360 SGSIIHSMeaivgyspDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEILN---DSWLYSPIFAIIAC 436
Cdd:MTH00151 309 AGSIIHSS--------SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILEsslMSPTSLLMVLLMFV 380
|
410 420 430
....*....|....*....|....*....|....*...
gi 2248517097 437 STaGLTAFYMFRIYLLTFEGHLNVHFqnYSGKKSNSLY 474
Cdd:MTH00151 381 GV-GLTALYSARLSFCLVWGSMKSSS--LSSKSDEDFY 415
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
44-478 |
2.30e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 199.60 E-value: 2.30e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 44 SILLLSIVMILSVDLSIQQINRSSIYQYVWSWTINNDFYFEFGHFIDPLSSIMSILITTVGILVLIYSDNYMSHDQGYLR 123
Cdd:MTH00165 7 SFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINR 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 124 FFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIgFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYwITGSF 203
Cdd:MTH00165 87 FIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMM-NFGSW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 204 EFQDLFEIVNNLIYNNevhflvvtLCAFLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 283
Cdd:MTH00165 165 NFIFYLDFMKNSFEML--------LIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 284 FIIiPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSYRAGLFHLITHAYSKALLFLGSGSI 363
Cdd:MTH00165 237 LFS-SFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSI 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 364 IHSMeaivgyspDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKD---EILNDSWLYSPIFAIIACSTaG 440
Cdd:MTH00165 316 IHNM--------SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDlilEMVSMSNLNFFIFFLFFFST-G 386
|
410 420 430
....*....|....*....|....*....|....*....
gi 2248517097 441 LTAFYMFRIYLLTFEGHLNVH-FQNYSGKKSNSLYSISL 478
Cdd:MTH00165 387 LTVSYSFRLIYYSMSGDFNLKsLNNLSDESKFMLKSMIL 425
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
45-459 |
2.86e-53 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 193.71 E-value: 2.86e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 45 ILLLSIVMILSVDLSIQQINRSSIYQYVWSWTINNDFYFEFGHFIDPLSSIMSILITTVGILVLIYSDNYMSHDQGYLRF 124
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 125 FAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPiAANACQKAFVTNRVGDFGLLLGilglywITGSFE 204
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSK-SLSAGMLTALTNRVGDALLILS------IAWMLM 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 205 FQDLfeivnNLIYNNEVHFLVVTLCAFLLFAgAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLF 284
Cdd:MTH00209 159 HGNW-----NIFYLNFNSNLGSVISVLIVLA-AMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 285 IIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSYRAGLFHLITHAYSKALLFLGSGSII 364
Cdd:MTH00209 233 FSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNII 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 365 HSMEaivgyspdKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEILnDSWLYS--PIFAIIACSTA-GL 441
Cdd:MTH00209 313 HSHG--------HSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL-ESMLESnmPIMTLILMFLStSL 383
|
410
....*....|....*...
gi 2248517097 442 TAFYMFRIYLLTFEGHLN 459
Cdd:MTH00209 384 TAAYSMRLSYFSLWGPNS 401
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
18-459 |
2.22e-51 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 186.44 E-value: 2.22e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 18 VPILIGVGLLLFPTETKKLRRMWAFPS---ILLLSIVMILSVDLSiqqinrSSIYQYVWSWTINNDF--YFEFGhfIDPL 92
Cdd:COG1008 12 LPLLGALLLLLLPRRNARLARWVALAVsllTLLLSLYLLAGFDPG------TGGFQFVESYPWIPSLgiSYHLG--VDGI 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 93 SSIMSILITTVGILVLIYSDNYMSHDQGylRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFW--FTRPI 170
Cdd:COG1008 84 SLPLVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 171 AANacqKAFVTNRVGDFGLLLGILGLYWITGSFEFqDLFEIVNNLIYNNEVHFLvvtlcaFLLFAGAVA-KSAQFPLHVW 249
Cdd:COG1008 162 AAI---KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAQLLL------FLAFFIAFAvKVPMFPFHTW 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 250 LPDA-MEGPTPISAlIHAATMVAAGIFLVARL-LPLFiiiP----YIMNLISLIGIITVLLGATLALAQKDIKRSLAYST 323
Cdd:COG1008 232 LPDAhVEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF---PeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSS 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 324 MSQLGYTMLALGMG---SYRAGLFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVLMGGLTKHVPITKTAFLL 400
Cdd:COG1008 308 VSHMGFVLLGIFALnplGLQGAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVLAALFLL 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2248517097 401 GTLSLCGFPPLACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLN 459
Cdd:COG1008 379 AALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLK 437
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
44-451 |
3.25e-51 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 188.05 E-value: 3.25e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 44 SILLLSI-VMILSVDLSIQQINRSSIYQyvWSWTINNDFYFEFGHFIDPLSSIMSILITTVGILVLIYSDNYMSHDQGYL 122
Cdd:MTH00207 11 SYLLWFMsILMFPLSLYLMMCNKTILIE--WEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLS 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 123 RFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIgFWFTRPIAANACQKAFVTNRVGDFGLLL----GILGLYW 198
Cdd:MTH00207 89 RFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLsigwTLNQGHW 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 199 ITGSFEFQDLfeivNNLIynnevhflvvTLCAFLlfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVA 278
Cdd:MTH00207 168 SITNMWQTDM----NNYI----------ALSIMI---AAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLI 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 279 RLLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSYRAGLFHLITHAYSKALLFL 358
Cdd:MTH00207 231 RFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFV 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 359 GSGSIIHSMEaivgyspdKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEILNDSWLY---SPIFAIIA 435
Cdd:MTH00207 311 CAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYphnSLMILMIF 382
|
410
....*....|....*.
gi 2248517097 436 CSTaGLTAFYMFRIYL 451
Cdd:MTH00207 383 LAT-ALTAAYSTRFTL 397
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
16-447 |
1.20e-50 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 191.02 E-value: 1.20e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 16 LPVPILIGVGLLLFPTETKKLRRMWAFPSILLLSIVMILSVDLSIQQINRSSI-YQYVWSWTI-NNDFYFEFGHFIDPLS 93
Cdd:PRK12650 2 LAVLALAALAVVLAPPLVRVLDRKAGWPLAAIFVAAAGLLLKELPPILDGDALtWSVTWIPDLlGNGVDVNLALRADALS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 94 SIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFwfTRPIAAN 173
Cdd:PRK12650 82 LFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR--SGSGGEA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 174 ACQKAFVTNRVGDFGLLLGILGLYWITGSfefQDLFEIVNNLIYNNEVHFLVVTlcAFLLFAGAVAKSAQFPLHVWLPDA 253
Cdd:PRK12650 160 GSIRTLILTFFGGLTLLAAVAIAATQTGT---TSLSGILHSDVWAEKPGLTTVV--AVLIAVAAFTKSAQFPFHFWLPEA 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 254 MEGPTPISALIHAATMVAAGIFLVARLLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLA 333
Cdd:PRK12650 235 MAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVAT 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 334 LGMGS---YRAGLFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFPP 410
Cdd:PRK12650 315 IGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDH--QA-------GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPP 385
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 2248517097 411 LACFWSKDEILnDSWLYSPIFA---IIACSTAGLTAFYMF 447
Cdd:PRK12650 386 LFGFVSKEGML-TAFLEAPGGNagvVLLLVGAALGAVFTF 424
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
18-456 |
3.79e-50 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 183.63 E-value: 3.79e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 18 VPILIGVGLLLFPTETKKLRRMWAFPSILLLSIVMILSVdlsiqqinrSSIYQYVWSWTINNDFYFEFGHF--------- 88
Cdd:PRK12667 9 TPILLVLFAFLLPLLSILLKGNRKIQKIYALLVSLITLI---------LSILLFIQVYSSNKPIVYLFGGWpapigivye 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 89 IDPLSSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTR 168
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 169 PIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNNLIYNNEVHF---LVVTLCAFLLFAGAV--AKSAQ 243
Cdd:PRK12667 160 GDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGGLagnPPLALGVALALALWAftIKAAI 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 244 FPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL--------PLFIIIPYIMNLISLIGIITVLLGATLALAQKD 314
Cdd:PRK12667 240 FPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 315 IKRSLAYSTMSQLGYTMLALGMGS---YRAGLFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVLMGGLTKHV 391
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAGLGRKM 389
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2248517097 392 PITKTAFLLGTLSLCGFPPLACFWSKdEILNDSWLYS--PIFAIIACSTAGLTAFYMFRIYLLTFEG 456
Cdd:PRK12667 390 PIASFAFLIGALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
15-449 |
1.83e-49 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 181.23 E-value: 1.83e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 15 PLPVPI-LIGVGLLLFPTETKKLRRMWAF-PSILLLSIVMILSVDLSIQQINRSSIYQYVWSWTInndfyfEFGhfIDPL 92
Cdd:PRK08375 7 PLLVAVpLLAAALIVLLPKRRRLRWALALlVAALTFALAISLLPQVLDGGVIAYVVGGWPPGIGI------ELR--ADSL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 93 SSIMSILITTVGILVLIYSDNYMSHDQGylRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPiAA 172
Cdd:PRK08375 79 SALFLLVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR-AL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 173 NACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNnliynnEVHFLVVTLcAFLLFAGAVaKSAQFPLHVWLPD 252
Cdd:PRK08375 156 AAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAF-GFVLLALAL-KAAVFPLHTWLPR 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 253 AMEGPTPISALIHAATMVAAGIFLVARLL-----PLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQL 327
Cdd:PRK08375 228 AYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQM 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 328 GYTMLALGMGSYR---AGLFHLITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNMVLMGGLTKHVPITKTAFLLGTLS 404
Cdd:PRK08375 308 GYILLGLALLTPLalaAGLLHLLHHALMKGALFLAAGAI----EVTYG-----TRRLSELSGLGRRMPLTAAAFAVASLS 378
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 2248517097 405 LCGFPPLACFWSKDEIL---NDSWLYSPIFAIIACSTagLTAFYMFRI 449
Cdd:PRK08375 379 LIGVPPTSGFVSKWYLVvgaVEAGQWLVLAVLLASSL--LALLYFLRI 424
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
18-456 |
5.15e-48 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 177.98 E-value: 5.15e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 18 VPILIGVGLLLFPTETKKLRRMWAfpsILLLSIVMILSVDLSIQQINRSSIYQYVWSWTINNDFYFEFGHF-------ID 90
Cdd:PRK08376 13 IPLFGAFSMPIVSLLGGKAREIWA---VLISFLTLIVALLVFYEVWNNGTIVYVLGAESPTLTLPFGSGGFpiriiweVD 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 91 PLSSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPI 170
Cdd:PRK08376 90 LFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWE 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 171 AANACQKAFVTNRVGDFGLLLGILGLYwitGSFEFQDLFEIVNNLIYNNEvhflVVTLCAFLLFAGAVA-KSAQFPLHVW 249
Cdd:PRK08376 170 AIEAGIKYMFVGSLASSMVLLGIALLY---GQYGTLNMAYLAVKMSENPT----VVAKIALALFIAGLAmKSGAVPVHMW 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 250 LPDAM-EGPTPISALIHAATmvAAGIFLVARLlpLFIIIPYIMNL------ISLIGIITVLLGATLALAQKDIKRSLAYS 322
Cdd:PRK08376 243 LPDAYpAAPSSISAMLLVIK--QAGLYALARV--LFSIYGPAINLatvgwvIIILGCLTMFVGVAMAVVQKDVKRLLAYH 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 323 TMSQLGYTMLALGMG---------------SYRAGLFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVLMGGL 387
Cdd:PRK08376 319 SVSQIGYMLLGLGVGlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIYET---------GTRNLNELGGL 389
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2248517097 388 TKHVPITKTAFLLGTLSLCGFPPLACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLTFEG 456
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
83-456 |
2.55e-38 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 151.96 E-value: 2.55e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 83 FEFGHF---IDPLSSIMSILITTVGILVLIYSDNYMSHDQGY----LRFFayMSFFNSSMLGLVTSSNLIQIYIFWELVG 155
Cdd:PRK06521 69 LPFLPFhlrLDALSAFFLLVISLLGAAASLYSLGYFREYEGKgpgaMGFF--YNLFLASMVLVLLADDAFSFLVAWETMS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 156 LCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEivnnliynnevHFLVVTLC--AFLL 233
Cdd:PRK06521 147 LSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRA-----------AHLSPFWAslVFLL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 234 -FAGAVAKSAQFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFIIIP-----YIMnLIslIGIITVLLGA 306
Cdd:PRK06521 216 aLFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPgwwwgVLV-LA--LGAISAVLGV 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 307 TLALAQKDIKRSLAYSTMSQLGYTMLALGMG--------------SYRAGLFHLITHAYSKALLFLGSGSIIHSMEaivg 372
Cdd:PRK06521 292 LYALAEHDLKRLLAYSTIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATG---- 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 373 yspdkSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEIL--------NDSWLYS---PIFAIIACSTAGL 441
Cdd:PRK06521 368 -----TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLqsllsspgLPQWGLKlavPIAAAMLALTAAL 442
|
410
....*....|....*
gi 2248517097 442 TAFYMFRIYLLTFEG 456
Cdd:PRK06521 443 AAMCFVKFYGITFLG 457
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
16-449 |
6.65e-38 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 147.57 E-value: 6.65e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 16 LPVPILIGVGLLLFPTET---KKLRRMWAFPSILLLSIVMILSVdlsiqqinrssiyqyvWSWTINNDFYFeFGHFI-DP 91
Cdd:COG1007 8 LPEIILLLGALVLLLLDLflpRRSRRLLAGLALLGLLLALALLL----------------LALGGGTGTAF-GGMFVvDG 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 92 LSSIMSILITTVGILVLIYSDNYMSHDQGYLR-FFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPI 170
Cdd:COG1007 71 FALFFKLLILLAALLVLLLSRDYLERRGLLRGeFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRR 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 171 AANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNNLIYNNevhfLVVTLCAFLLFAGAVAKSAQFPLHVWL 250
Cdd:COG1007 151 SSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAALAAGGANS----PLLLLGLVLVLAGLAFKLSAVPFHMWT 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 251 PDAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQL 327
Cdd:COG1007 227 PDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHA 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 328 GYTMLALGMGS---YRAGLFHLITHAYSKALLFLgsgsIIhsmeAIVGYSPDKSQNMVLMGGLTKHVPITKTAFLLGTLS 404
Cdd:COG1007 306 GYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VI----LLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLS 377
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 2248517097 405 LCGFPPLACFWSKDEILNDSW---LYspIFAIIACSTAGLTAFYMFRI 449
Cdd:COG1007 378 LAGIPPTAGFFGKFYVFSAAVeagLY--WLAVIAVLNSVISAYYYLRV 423
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
73-417 |
4.56e-37 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 147.45 E-value: 4.56e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 73 WSWTINNDFYFEFGHfidpLSSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFfnSSMLGLVTSSNLIQIYIFWE 152
Cdd:PRK08668 55 TLFFGGFKLTFTLTH----LSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVLGVFLANDLLTLYIFWE 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 153 LVGLCSYLLIgfWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDlfeIVNNLIynNEVHFLVVTLCAFL 232
Cdd:PRK08668 129 IMTFSSFMMV--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAD---ISQGLI--NDTSTGFALIVFLF 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 233 LFAGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLLP---------LFIIIPYIMNLISLIGII 300
Cdd:PRK08668 202 LLAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtklfsefgTYRGVPLFNYILAWLGNI 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 301 TVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMG---SYRAGLFHLITHAYSKALLFLGSGSIIHSMeaivgyspdK 377
Cdd:PRK08668 282 SIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFAAVIYRT---------G 352
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2248517097 378 SQNMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSK 417
Cdd:PRK08668 353 TTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
90-364 |
2.34e-36 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 144.07 E-value: 2.34e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 90 DPLSSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRP 169
Cdd:PRK08168 68 SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 170 IAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNNLIYNNEVHFlvvtlCAFLLFAGAVAKSAQFPLHVW 249
Cdd:PRK08168 148 FARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHLAAQGASPSLQA-----AALLLVLAVILKTAQLPVHGW 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 250 LPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGY 329
Cdd:PRK08168 223 LIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGF 301
|
250 260 270
....*....|....*....|....*....|....*
gi 2248517097 330 TMLALGMGSYRAGLFHLITHAYSKALLFLGSGSII 364
Cdd:PRK08168 302 MLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-449 |
1.23e-35 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 141.49 E-value: 1.23e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 10 IIPFVPLPVPILIGVGLLLFPTETKK--LRRMWAFPSILLLSIVMILSVDLSIQQINRSSiyqyvwsWTINNDFYFEFGH 87
Cdd:PRK06589 7 TTPNNLLLSTLLVGALNLTSPFATKKdsFIRNFLLITISIFFFGNILLIDLLFLKGIRAQ-------FELMDFGNYSIGL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 88 FIDPLSSIMSILITTVGILVLIYSDNYMSHD--QGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFW 165
Cdd:PRK06589 80 HLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 166 FTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQ--DLFEIVNNLIynnevhflvvtlcAFLLFAGAVAKSAQ 243
Cdd:PRK06589 160 RNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVsgGLFSKNQSII-------------LLLMFIYGIAKTAI 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIIIPYIM------NLISLIGIITVLLGATLALAQKDIKR 317
Cdd:PRK06589 227 FPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQrifaefNWLIFIPIVSIFYSSLKALKTDNIKK 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 318 SLAYSTMSQLGYTMLALGM---GSYRAGLFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMVLMGGLTKHVPIT 394
Cdd:PRK06589 307 ILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDKLHGTSKSFPLI 377
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 395 KTAFLLGTLSLCGFPPLACFWSKDEIL-----NDSWLYSPIFAIIACSTAGLTAFYMFRI 449
Cdd:PRK06589 378 SFIISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKI 437
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
45-449 |
1.51e-35 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 140.73 E-value: 1.51e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 45 ILLLSIVMILSVDLSIQQINRSSIYQY---------VWSWTINNDFYFEFGHF--IDPLSSIMSILITTVGILVLIYSDN 113
Cdd:PRK05777 16 ILLGAAVVLLLIDAFVRRHSRRATLAVlalllalvaLLFVLGAAGGGTAFGGMlvVDGFALFLKGLILLASLLALLLARP 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 114 YMShDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGI 193
Cdd:PRK05777 96 YLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGM 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 194 LGLYWITGSFEFQDLFEIVNNliyNNEVHFLVVTLCAFLLfAGAVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAA 272
Cdd:PRK05777 175 SLLYGATGSLSFAGIAKALAD---GSGNSLLLLFGLVFLL-VGLAFKLSAVPFHMWTPDVYEGaPTPVTAFLATAPKIAA 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 273 gIFLVARLLpLFIIIPYIM---NLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGS---YRAGLFHL 346
Cdd:PRK05777 251 -FAVLLRLL-VVAFGGLSEdwqQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTaegYSAVLFYL 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 347 ITHAYSKallfLGSGSIIHSMEAIVGYSPDKSQnmvlMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEIL----- 421
Cdd:PRK05777 329 LAYLFMT----LGAFGVISLLRRKGGEAESISD----FAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFeaave 400
|
410 420
....*....|....*....|....*....
gi 2248517097 422 -NDSWLyspifAIIACSTAGLTAFYMFRI 449
Cdd:PRK05777 401 aGLWWL-----AVIGVLNSAIGAFYYLRV 424
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
18-459 |
4.45e-34 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 136.87 E-value: 4.45e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 18 VPILIGVGLLLFPTETKKLRRMWAFPS---ILLLSIVMILSVDLSIQQINrsSIYQYVWSWTINndFYFEFGhfIDPLSS 94
Cdd:PRK05846 12 LPLIGGLLVLLTERFGARLARWIALIGtllTLLLSLVLWIGFDSSNAGFQ--FVEKHPWIPRFG--ISYHLG--VDGISL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 95 IMSILITTVGILVLIYSDNYMSHDQGylRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFW--FTRPIAA 172
Cdd:PRK05846 86 LLVVLTALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWggKNRIYAA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 173 NacqKAFVTNRVGDFGLLLGILGLYWI----TGSFEFQDLfeivnnliYNNEVHFLVVTLCAFLLFAGAVAKSAQFPLHV 248
Cdd:PRK05846 164 T---KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADL--------LNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHT 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 249 WLPDAMEGPTPISALIHAATMVAAGIF-LVARLLPLFIIIP-YIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQ 326
Cdd:PRK05846 233 WLPDAHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDAShEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 327 LGYTMLALGMGSYRA---GLFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVLMGGLTKHVPITKTAFLLGTL 403
Cdd:PRK05846 313 MGFVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVLYDRL---------HTRDIADYGGLAKVMPVLAAFFLFFAM 383
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 2248517097 404 SLCGFPPLACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLN 459
Cdd:PRK05846 384 ASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVK 439
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
18-465 |
1.87e-33 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 134.68 E-value: 1.87e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 18 VPILIGVGLLLFPTETKKLRRMWAFPSILLlsiVMILSVDLSIQQINRSSIYQYVWSWTINNDFYFEFGHFIDPLSSIMS 97
Cdd:TIGR01972 7 LPLIGALLILLLPSNKDGKARWIALVVALA---TLLLSLLLLFQFDPTGSGFQFTEDIPWIPALGISYHLGVDGISLLLV 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 98 ILITTVGILVLIYSDNYMSHDQGYlrFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWfTRPIAANACQK 177
Cdd:TIGR01972 84 LLTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYAAMK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 178 AFVTNRVGDFGLLLGILGLYWITG-SFEFQDLfeivnnliYNNEVHFLVVTLCAFLLFAGAVAKSAQFPLHVWLPDAM-E 255
Cdd:TIGR01972 161 FFLYTLAGSLLMLLAILGLYFLGGgTFDLLEL--------LNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHvE 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 256 GPTPISALIHAATMVAAGIFLVARLLPLFiiiP----YIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTM 331
Cdd:TIGR01972 233 APTAGSVILAGVLLKMGTYGFLRFNLPLF---PdaslYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVL 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 332 LALGMGSYRA---GLFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGF 408
Cdd:TIGR01972 310 LGIFSFNELGisgAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGL 380
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2248517097 409 PPLACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLNVHFQNY 465
Cdd:TIGR01972 381 PGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAE 437
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
19-456 |
1.07e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 132.38 E-value: 1.07e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 19 PILIGVGLLLFPTETKKLRRMWAFPSILLLSIVMILSVDLSIQQINRssiyqyvwswtinndfyFEFGHFIDPLSSIMSI 98
Cdd:PRK07234 12 PFLLGFAIYLLPKLDRNLALGMAIVSAVYALGLVASMVPLELTLLDN-----------------FGVTLRADALSGYFIL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 99 LITTVGILVLIYSdnyMSHDQGYLrFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPIAANACQKA 178
Cdd:PRK07234 75 TNALVTLAVIFYC---WESAKTRF-FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 179 FVTNrVGDFGLLLGILGLYWITGSFEFQDLFEivnnliynnevhflVVTLCAFLLFAGAVAKSAQFPLHVWLPDAMEGPT 258
Cdd:PRK07234 151 FYSN-VAMLFYLIGAVLVYQANGTFAFSGLAT--------------ADPEAFALIALGLLVKGGIFVSGLWLPLTHSEAE 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 259 PISALIHAATMVAAGIFLVARLLplfIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGs 338
Cdd:PRK07234 216 PPVSALLSGVVVKAGVFPLVRCA---LDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG- 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 339 yraGLFHLiTHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMVLMGGLTKHVPITktaflLGTLSLCGFPPLACFWSKD 418
Cdd:PRK07234 292 ---GLYAL-AHGLVKSTLFLCAGAL---------PSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKV 353
|
410 420 430
....*....|....*....|....*....|....*...
gi 2248517097 419 EILndsWLYSPIFAIIACSTAGLTAFYMFRIYLLTFEG 456
Cdd:PRK07234 354 LTL---KNLLPWQAIALNLAAVGTAASFWKFIFLPFSA 388
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
7-416 |
2.29e-32 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 131.59 E-value: 2.29e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 7 YSWIIPFVPLpVPILIGVGLLLFPtetkkLRRMWAFPSILLLSIVMILSVDLSIQQINRSSIYQYvwswtinNDFYFefg 86
Cdd:PRK06458 3 YSILFALLLL-IPLLASLLLFALR-----KRRLVATLNVLGITLTLILALWLVFTVPDAGEIFAA-------GLWFF--- 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 87 hfIDPLSSIMSILITTVGILVLIYSDNYMSHDQ-------GYLRFFAYM-SFFNSSMLGLVTSSNLIQIYIFWELVGLCS 158
Cdd:PRK06458 67 --IDDLNVFFLALIGVVGFLTSLYSIGYMRHEVehgelspVTLRLYYGMyQLFLFTMLLALTSNNLGLMWVAIEATTLSS 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 159 YLLIGFWFTRPiAANACQKAFVTNRVGDFGLLLGILGLYW----ITGSFEFQDLFEIVNNliYNNEVHFLVVTLCAFLLF 234
Cdd:PRK06458 145 ALLVGIYRTRA-SLEAAWKYIIICSVGVAFALFGTILVYAnaatVMGDGEMAILWTELLK--HASLLDPTLMKLAFVFLL 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 235 AGAVAKSAQFPLHVWLPDA-MEGPTPISALihaatmvaagifLVARLLP--LFIIIPYIM------------NLISLIGI 299
Cdd:PRK06458 222 IGFGTKVGLFPMHAWLPDAhSEAPSPVSAL------------LSGVLLNvaLYAVLRYYIlidaaigsdfpgRLLLIFGL 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 300 ITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGS---YRAGLFHLITHAYSKALLFLGSGSIIHSMeaivgyspd 376
Cdd:PRK06458 290 LSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKY--------- 360
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 2248517097 377 KSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWS 416
Cdd:PRK06458 361 GTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFIS 400
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
92-454 |
1.22e-31 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 130.04 E-value: 1.22e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 92 LSSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTrpia 171
Cdd:MTH00095 46 NSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNN---- 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 172 ANACQKA---FVTNRVGDFGlllgilglywitgsfefqdLFEIVNNLIYNNEVHFLVVTLCA---FLLFAGAVAKSAQFP 245
Cdd:MTH00095 122 WDSNSGAmntALTNRIGDFF-------------------IFLFFSGFIFSSYYFFSFSFFSSsmiLMLLLTSFTKSAQFP 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 246 LHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIIIpYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMS 325
Cdd:MTH00095 183 FSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLS 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 326 QLGYTMLALGMGSYRAGLFHLITHAYSKALLFLGSGSIIHSMEAivgyspdkSQNMVLMGGLTKHVPITKTAFLLGTLSL 405
Cdd:MTH00095 262 QMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFG--------QQDGRNYSNNGNLPMFIQLQLLVTLFCL 333
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 2248517097 406 CGFPPLACFWSKDEILNDSWL--YSPIFAIIACSTAGLTAFYMFRIYLLTF 454
Cdd:MTH00095 334 CGLMFTSGMVSKELILELFFFnnYMIFFSLMFFFSVFLTFGYSYRLWKSFF 384
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
20-417 |
2.00e-31 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 130.62 E-value: 2.00e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 20 ILIGVGLLLFPTETKKL---RRMWAFPSIL-LLSIVMILSVDLSIQQINRSSIYQYVWSWTINNDFYFefghFIDPLSSI 95
Cdd:PRK08667 6 FLGAILLLLAAAVIPLVfrhKRKRVWQSVLwLVIAIALLLFAGSLQLFTGNPLDIPLWGIAPGLDITF----HIDRLAAF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 96 MSILITTVGILVLIYSDNYMSHDQGYLR---FFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPIAA 172
Cdd:PRK08667 82 FIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 173 NACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLfeivnnliynnEVHFLVVTLCAFLLFAGAVAKSAQFPLHVWLPD 252
Cdd:PRK08667 162 RAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPL-----------GASAGILSLVFLLLFLGFGIKAGIIPFHKWLPY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 253 AMEG-PTPISALIhAATMVAAGIFLVARLLpLFIIIPYIM--NLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGY 329
Cdd:PRK08667 231 AHPAsPSNVSALM-SGVMLKVAVYGLVRFL-MDVLSPELWwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGI 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 330 TMLALG--------------MGSYRAGLFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVLMGGLTKHVPITK 395
Cdd:PRK08667 309 ILMGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHAT---------GTRNIEKMGGLVKLMPYTS 379
|
410 420
....*....|....*....|..
gi 2248517097 396 TAFLLGTLSLCGFPPLACFWSK 417
Cdd:PRK08667 380 ALFLVGAVSIAALPPFNGFASE 401
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
88-421 |
3.13e-28 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 119.10 E-value: 3.13e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 88 FIDPLSSIMSILITTVGILVLIYSDNYMSHDQgylrFFAYMSFFNSSMLG---LVTSSNLIQIYIFWELVGLCSYLLIGF 164
Cdd:PRK08377 75 YIGPFAALFVLIIAIVSFIMSIFSLKAVEVEP----IDKYAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTAY 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 165 WFTRPiAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNNliynneVHFLVVTLCAFLLFAGAVAKSAQF 244
Cdd:PRK08377 151 NKTGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGT------IDPTVAQVGLALLIFGLAVEAELF 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 245 PLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLPLFIIIP---YIMNLISLIGIITVLLGATLALAQKDIKRSLA 320
Cdd:PRK08377 224 PLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANgwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIA 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 321 YSTMSQLGYTMLALGMGS---YRAGLFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVLMGGLTKHVPITKTA 397
Cdd:PRK08377 303 YSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALA 373
|
330 340
....*....|....*....|....
gi 2248517097 398 FLLGTLSLCGFPPLACFWSKDEIL 421
Cdd:PRK08377 374 LTIGALSTVGIPLFNVFWSKFRII 397
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
10-473 |
1.94e-26 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 113.50 E-value: 1.94e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 10 IIPFVPLPVPILIGVGLLLFPTETKKLRRM----WAFPSILLLSIVMILSVdlsiqqinrssiyqyVWSWTINNDFYFEF 85
Cdd:TIGR01770 1 LIAILPEIILLLGAFILLLYGLFYSRKKRNplllKNLSYIVLLSALVSLFL---------------TLQYAAYLFTGFSF 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 86 gHFIDPLSSIMSILITTVGILVLIYSDNYMSHDQ-GYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGF 164
Cdd:TIGR01770 66 -FIVDNFALLIKLILLLSTLLTFFFALSYLSKEKiNKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGL 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 165 WFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNNLIYNNEVHFLvvtlcAFLLFAGAVA-KSAQ 243
Cdd:TIGR01770 145 KRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNISLLLL-----GIVLILVGLLfKLSA 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 244 FPLHVWLPDAMEG-PTPISALIHAATMVAA-GIFLVARLLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAY 321
Cdd:TIGR01770 220 VPFHMWVPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAY 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 322 STMSQLGYTMLALGMGSYrAGLFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDksqNMVLMGGLTKHVPITKTAFLLG 401
Cdd:TIGR01770 300 SSISHVGYILIGLLAGTL-EGIKAVLFYIFIYALMSLGAFGVLSLLRSYKDEWIE---YISDFAGLFKTNPILAILILIF 375
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2248517097 402 TLSLCGFPPLACFWSKDEIL-----NDSWLYSPIFAIIACstagLTAFYMFRIYLLTFEGHLNVHFQNYSGKKSNSL 473
Cdd:TIGR01770 376 MFSLAGIPPLAGFFGKFYVFfallkSGLYWLAVIAVLTSV----IGAFYYLRVVKVMYFDKPERRIPSNPQSKAQSL 448
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-456 |
3.12e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 113.12 E-value: 3.12e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 14 VPLPVPILIGVgLLLFPTETKKLRRMWAFPSILLLsivMILSVDLSIQQINRSSIYQYVWSWtinnDFYFEFGHFIDPLS 93
Cdd:PRK07691 8 LPILIPVITAI-LLIFLGKRPIIQRYVALIGSLLT---LVAAIILVANVYKHGIQTLELGNW----KAPFGIVFVADMFA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 94 SIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRpIAAN 173
Cdd:PRK07691 80 ALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQLR 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 174 ACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNNLIYNNEVHFLVVTLCAFLLFAgavAKSAQFPLHVWLPDA 253
Cdd:PRK07691 159 ESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGLITVVAILFLFVFA---TKAGLFPLYFWLPGS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 254 MEGP-TPISALIhAATMVAAGIFLVARLLPLFII--IPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYT 330
Cdd:PRK07691 236 YYAPpIAIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVI 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 331 MLALGMG---SYRAGLFHLITHAYSKALLFLgsgsIIHSMEAIVGYSPDKSqnmvlMGGLTKHVPITKTAFLLGTLSLCG 407
Cdd:PRK07691 315 LVGVAMMtesGMIGAIYYLIHDMIVKAALFL----LIGIMIKITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSLAG 385
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 2248517097 408 FPPLACFWSKDEILNDSWLY-SPIFAIIACSTAGLTAFYMFRIYLLTFEG 456
Cdd:PRK07691 386 IPPLSGFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWG 435
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
89-386 |
2.72e-24 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 107.43 E-value: 2.72e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 89 IDPLSSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSF--FNSSMLGLvtSSNLIQIYIFWELVGLCSYLLIGFWF 166
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGATLLGLTLLIGLNK 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 167 TRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEfqdlfeIVNNLIYNNEVHF--LVVTLCAFLLFAGAVAKSAQF 244
Cdd:PRK08601 148 GWKVAREAAKISGMLFLISWLALALAIVWLFIATGEWQ------LTSVLSNENLAQLgtWEKTGINLLLILAVMIPAAQW 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLFI-IIPYIMNLIslIGIITVLLGATLALAQKDIKRSLAYST 323
Cdd:PRK08601 222 PFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHdDIAQILLLI--FASISVLIGTGISLVQVDYKRQLVGST 298
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2248517097 324 MSQLGYTMLALGMGSYRAGLFHLITHAYSKALLFLGSGSIIHSMEaIVGYSPDKSQNMVLMGG 386
Cdd:PRK08601 299 MAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN-IVKQANEKKSYLWIVVG 360
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
10-417 |
2.90e-23 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 104.59 E-value: 2.90e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 10 IIPFVPLPVPILIGVGLLLFpteTKKLRRMWAFPSILLLSIVMILSVDLSIQqinrssiyqyvwsWTIN-NDFYFEFGHf 88
Cdd:PRK12668 2 MLDFLPPALVFIAGALLVPF---LPGRARKALLLLAPVLAVLAVLTVPEGTY-------------LTVTfLGFDLVLGR- 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 89 IDPLSSIMSILITTVGILVLIYSdnymSHDQGYLRFFAYMSFFNSSmLGLVTSSNLIQIYIFWELVGLCSYLLIgfWFTR 168
Cdd:PRK12668 65 VDKLSRVFGLIFGIMAFIGVIYA----LHVKDPGQHVAALLYVGSA-LGAVFAGDLLTLFVFWELMAFTSTFLV--WARG 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 169 -PIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFqDLFEIVNnliynnevhflvvTLCAFLLFAGAVAKSAQFPLH 247
Cdd:PRK12668 138 tKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLG-------------GTAAWLILIGFGVNAAFPPLH 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 248 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIIIPYImnlisliGIITVLLGATLALAQKDIKRSLAYSTMSQL 327
Cdd:PRK12668 204 AWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELLIYI-------GAAMAVYGVFFALLENDLRRLLSYHIVSQV 276
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 328 GYTMLALGMGSYRA--GLF-HLITHAYSKALLFLGSGSIIHSmeaiVGYSpdksqNMVLMGGLTKHVPITKTAFLLGTLS 404
Cdd:PRK12668 277 GYMVAGIGIGTALAinGAVaHAFNHILYKGLLFMSAGAVLYR----TGTE-----KLTELGGLYRSMPLTALFCLVGALS 347
|
410
....*....|...
gi 2248517097 405 LCGFPPLACFWSK 417
Cdd:PRK12668 348 ISAFPLFSGFVSK 360
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-449 |
1.48e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 101.73 E-value: 1.48e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 11 IPFVPLPVPILIGVGLLLfpteTKKLRRMWAFPSILLLsIVMILSVDLSIQQINRSSIYQYVWSWTINNDFYFEfghfID 90
Cdd:PRK12662 5 LPILQVIIPLLSAVVCAL----LKNRKLVKIISCIVVA-VSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELR----VD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 91 PLSSIMSILITTVGILVLIYSdNYMSHDQ----GYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWF 166
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYG-IYPNRKEisvnKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGR 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 167 TRPiAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNNLIYNNevhflVVTLCAFLLFAGAVAKSAQFPL 246
Cdd:PRK12662 155 DKK-ALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNR-----AIQIGVLFIMVGLFIKAALFPF 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 247 HVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL------PLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSL 319
Cdd:PRK12662 229 HKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIF 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 320 AYSTMSQLGYTMLALGMGSYrAGLF----HLITHAYSKALLFLGSGSIIHSMEaivgyspdkSQNMVLMGGLTKHVPITK 395
Cdd:PRK12662 308 AYSSISHIGYIILAVSLNTY-YGLAaavaYIVNHSIVKSALFMVSGSISYHFG---------TTKLEDCLNLWKSMPKIT 377
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2248517097 396 TAFLLGTLSLCGFPPLACFWSKDEILN---DSWLYSPIFAIIACStaGLTAFYMFRI 449
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKWYILDafiKSNAWIGLVVLLVGS--GLSVIYVWKI 432
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
8-454 |
6.07e-22 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 100.02 E-value: 6.07e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 8 SWIIpFVPLPVPILIGVGLLLFPTETKkLRRMWAFPSillLSIVMILSVDLSIQQINRSSIYQYVWSWTINndfyFEFGH 87
Cdd:PRK12663 3 SNLL-ILPMLLPLLCGLVLVFLRNRDR-LQRYLAIGT---LTILTLISLALLIYVQRHGPITLDFGGWLPP----FGIQF 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 88 FIDPLSSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFT 167
Cdd:PRK12663 74 TGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 168 RPiAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNNLIYNNEVhflvVTLCAFLLFAGAVaKSAQFPLH 247
Cdd:PRK12663 154 RE-QLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATL----TTIALLFLLAFGM-KAALFPFM 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 248 vWLPDAMEGP-TPISALIhAATMVAAGIFLVARLLP-LFIIIPYIMN-LISLIGIITVLLGATLALAQKDIKRSLAYSTM 324
Cdd:PRK12663 228 -WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHpLLATMAAITMVIGALGALAYKDIRRIAGYQVI 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 325 SQLGYTMLALGMGSYRA---GLFHLITHAYSKALLFLGSGSIIhsmeAIVGYSPDKSqnmvlMGGLTKHVPITKTAFLLG 401
Cdd:PRK12663 306 SSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLV----RLTGYRSLQY-----LGGLYRKEPLFGALFLIL 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2248517097 402 TLSLCGFPPLACFWSKDEIL-----NDSWlyspIFAIIACSTAGLTAFYMFRIYLLTF 454
Cdd:PRK12663 377 IFAIGGLPPFSGFWGKVLLVqgaldNGAY----ILLALMLITSLITMYSLFRIFFLAY 430
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
45-478 |
1.48e-21 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 98.92 E-value: 1.48e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 45 ILLLSIVMILSVDLSIQQINRS------------SIYQYVWSWTINNDFYFEFGHFIDPLSSIMSILITTVGILVLIYSD 112
Cdd:CHL00049 21 ILIFGLILLLMIDLTSDQKDIPwlyfisstslvmSITALLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSV 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 113 NYMSHDQGYLRFFayMSFFNSSMLG---LVTSSNLIQIYIFWELVGLCSYLLIGFwFTRPIAAN-ACQKAFVTNRVGDFG 188
Cdd:CHL00049 101 EYIECTEMAITEF--LLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY-TKKDVRSNeATMKYLLMGGASSSI 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 189 LLLGILGLYWITGSfEFQdLFEIVNNLIYNNEVHFLVVTLCAFLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIhAA 267
Cdd:CHL00049 178 LVYGFSWLYGLSGG-EIE-LQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPVVAFL-SV 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 268 TMVAAGIFLVARLLPlfIIIPYIMN----LISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSYRAGL 343
Cdd:CHL00049 255 TSKVAASALATRIFD--IPFYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGY 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 344 FHLITHAYSKALLFLGSGSIIHSMEAIVGyspdkSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEILND 423
Cdd:CHL00049 333 ASMITYMLFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWC 407
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2248517097 424 SW---LYSPIFaiIACSTAGLTAFYMFRIYLLTFEGH---LNVHFQNYSGKKSNSLYSISL 478
Cdd:CHL00049 408 GWqagLYFLVS--IGLLTSVISIYYYLKIIKLLMTGRnqeITPYVRNYRRSPLRSNNSIEL 466
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
44-454 |
3.36e-21 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 98.03 E-value: 3.36e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 44 SILLLSIVMILSVDLSIqqiNRSSIYQYVWSWTINNDFYFEFGHFIDPLSSIMSILITTVGILVLIYSDNYMSHDQGYLR 123
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLF---LVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 124 FFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTrPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSF 203
Cdd:MTH00063 78 LNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGS 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 204 efqdlfeivnnliynnevhfLVVTLCAFLLFAgavAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlLPL 283
Cdd:MTH00063 157 --------------------FLCCLFFFLIVF---TKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDY 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 284 FIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSYRAGLFHLITHAYSKALLFLGSGSI 363
Cdd:MTH00063 213 LLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 364 ihsmeaIVGYSPDKSQNMVLMGGLTKHVPITKTAFLLgtLSLCGFPPLACFWSKDEILND--SWLYSPIFAIIACSTAGL 441
Cdd:MTH00063 293 ------MSGSGGSQSSNCVYSSILYGSWNLFYLFLLV--LGLSGVPFIGVFFSKHFLLSSfsSVVFNVSLLLVVILCVFL 364
|
410
....*....|...
gi 2248517097 442 TAFYMFRIYLLTF 454
Cdd:MTH00063 365 SYLYSFRLCLILF 377
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
16-465 |
6.33e-19 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 90.54 E-value: 6.33e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 16 LPVPILIGVGLLLFPTETKKLRRMWAFPS--ILLLSIVMILSVDLSIQQINrssiYQYVWSWTINNDFYFEFGhfIDPLS 93
Cdd:PRK07363 8 LPILGAIIIGFFPGNLPSARLRQITLVFAvlVLAWSLFLLTQFDLSDPGMQ----FQEYLPWNEPLGLSYSLG--VDGLS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 94 SIMsILITTVGILVLIYSDNYMSHDQGYlrFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPiAAN 173
Cdd:PRK07363 82 LPL-LVLNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-RGY 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 174 ACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNNLIYNNEVHFLVVTLCAFLLfagavaKSAQFPLHVWLPDA 253
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILLTGLLLGFGI------KIPLVPLHTWLPDA 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 254 MEGPTPISALIHAATMVAAGIFLVARL-LPLFiiiPYIMNLIS----LIGIITVLLGATLALAQKDIKRSLAYSTMSQLG 328
Cdd:PRK07363 232 YTEASPAVAILLGGVLAKLGTYGLLRFgLQLF---PQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 329 YTMLALGMG---SYRAGLFHLITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNMVLMGGLTKHV---PITKTAFLLGT 402
Cdd:PRK07363 309 YILVAAAAGtqlSLLGAVAQMISHGLILALLFHLVGIV----ERKVG-----TRDLDVLNGLMNPIrglPLTSALLVLAG 379
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2248517097 403 LSLCGFPPLACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLNVHFQNY 465
Cdd:PRK07363 380 MASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKLAYY 442
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
89-456 |
1.28e-18 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 90.27 E-value: 1.28e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 89 IDPLSSIMSILITTVGILVLIYSDNYMSHDQ----GYLrffayMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGf 164
Cdd:PRK08042 58 ISPLNAIWLITLGLCGLFVSLFNIDWHRHAQvkanGLL-----INLLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTG- 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 165 wftrpiaanaCQKA----FVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVNNLIYNNEVHFLVVTlcAFLLFAGAVak 240
Cdd:PRK08042 132 ----------NSKEgklwFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVI--GFGLLAGII-- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 241 saqfPLHVWLPDAMEGPTPISALIHAATMVAAGIF------LVARLLPLFIIIpyimnLISLIGIITVLLGATLALAQKD 314
Cdd:PRK08042 198 ----PLHGWVPQAHANASAPAAALFSTVVMKIGLLgiltlsLLGGNAPLWWGV-----ALLVLGMITAFVGGLYALMEHN 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 315 IKRSLAYSTMSQLGYTMLALGMG--------------SYRAGLFHLITHAYSKALLFLGSGSIIHSmeaiVGYspdksQN 380
Cdd:PRK08042 269 IQRLLAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFLGAGSVWFR----TGH-----RD 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 381 MVLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEI------LNDSWLY-----SPIFAIIACSTAGLTAFYMFRI 449
Cdd:PRK08042 340 IEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFvarllGPLLAVGLAITGALAVMCMAKV 419
|
....*..
gi 2248517097 450 YLLTFEG 456
Cdd:PRK08042 420 YGVTFLG 426
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
88-446 |
3.70e-17 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 85.19 E-value: 3.70e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 88 FIDPLSsIMSILITTVG-ILVLIYSDNYMSH-------DQGYLR-FFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCS 158
Cdd:PRK08676 60 FIDHLG-IFVVLIASVVfILAALYARGYVDHllsngelDPENLKvFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFS 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 159 YLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWI-----TGSFEFQDLFEIVNNLIYNnevhflVVTLCAFLL 233
Cdd:PRK08676 139 AMLIAILSARENIDAALKYIFIASTAMIFAFIGLIFLFSLTrqalgTGTLNWTELAAHASLLSPS------VLGASFLFI 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 234 FAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFI---IIPYIMNLISLIGIITVLLGATLA 309
Cdd:PRK08676 213 FIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGLGIFSIAVAAFSM 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 310 LAQKDIKRSLAYSTMSQLGYTMLALGMGSYRA---GLFHLITHAYSKALLFLGSGsIIHSMeaivgYSPDKSQNmvlMGG 386
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ-----YRSDRFDR---IFD 362
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2248517097 387 LTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEILNDS-----WLYSPIFAIIACSTAGLTAFYM 446
Cdd:PRK08676 363 VFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLggisvWLVLAVLLLLLLAASSFAIFLL 427
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
227-454 |
2.63e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 82.71 E-value: 2.63e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 227 TLCAFLLFAGAVaKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLVARLLPLFIIIPYIMNLISLIGIITVLLG 305
Cdd:PRK12665 210 ALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 306 ATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSyRAGL----FHLITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNM 381
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALST-VAGLsgaiYYVAHHITVQTTLFLVVGLI----ERQAG-----SSSL 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 382 VLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEIL-----NDSWLyspIFAIIACS--TAGLTAFYMFRIYLLTF 454
Cdd:PRK12665 358 RRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeagaeDGTWL---AWALVAGGvvTSLLTLYAVARVWTKAF 434
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
124-464 |
5.22e-16 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 81.67 E-value: 5.22e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 124 FFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFW--FTRPIAAnacQKAFVTNRVGDFGLLLGILGLYWITG 201
Cdd:PRK06473 109 YYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWggQRRGYAA---TKFLLYTAISGILILVSFLGLVWLSG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 202 SFEFQDLFEIVNNLIYNNEVHFLVVTLCAFLLfagavaKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARL 280
Cdd:PRK06473 186 ASSFDYEPLRSHTLPLSTQLLLLAPILVGFGI------KIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRF 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 281 -LPLFI-IIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMG---SYRAGLFHLITHAYSKAL 355
Cdd:PRK06473 259 gVGLFPeAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQMISHGLISAL 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 356 LFLGSGsiihsmeaiVGYSPDKSQNMVLMGGL---TKHVPITKTAFLLGTLSLCGFPPLACFWSKDEILNDSWLYSPIFA 432
Cdd:PRK06473 339 LFLLVG---------VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQT 409
|
330 340 350
....*....|....*....|....*....|..
gi 2248517097 433 IIACSTAGLTAFYMFRIYLLTFEGHLNVHFQN 464
Cdd:PRK06473 410 LLCMIGTGLTAVYFLLLVNRVFFGRLTAELSN 441
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
45-417 |
6.78e-15 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 78.17 E-value: 6.78e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 45 ILLLSIVMILSVDLSIQQINR------------SSIYQYVWSWTINNDFYFeFGHFI-DPLSSIMSILITTVGILVLIYS 111
Cdd:PRK02504 20 IVILTLLGVLLVDLIGGRTASrwlpylaiaglgAALVALALQWDNPNPISF-LGSFNaDNLSIAFRAIIALSTLVTLLMS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 112 DNYMshDQGYLRFFAYMSFFNSSMLG---LVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPIAANACQKAFVTNRVGDFG 188
Cdd:PRK02504 99 WRYV--EQSGTPLGEFAAILLTATLGgmfLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAI 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 189 LLLGILGLYWITGSfefQDLFEIVNNLIYNNEVHFLVVTLcAFLLfAGAVAKSAQFPLHVWLPDAMEG-PTPISALIHAA 267
Cdd:PRK02504 177 FLYGSSLLYGLSGG---STQLSAIALALITSPSLGLALAL-VFVI-AGIAFKISAVPFHQWTPDVYEGsPTPVVAFLSVG 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 268 TMvAAGIFLVARLLPLfiIIPYIMN----LISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGS---YR 340
Cdd:PRK02504 252 SK-AAGFALAIRLLVT--AFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYA 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 341 AGLFHLITH------AYSKALLF-LGSGSiihsmEAIVGYSpdksqnmvlmgGLTKHVPITKTAFLLGTLSLCGFPPLAC 413
Cdd:PRK02504 329 SMVFYLLAYlfmnlgAFACVILFsLRTGT-----DQISDYA-----------GLYQKDPLLTLGLSLCLLSLGGIPPLAG 392
|
....
gi 2248517097 414 FWSK 417
Cdd:PRK02504 393 FFGK 396
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
44-421 |
1.07e-14 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 76.98 E-value: 1.07e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 44 SILLLSIVMILSVDLsIQQINRSSIYQYVWSWTINNDFYFEFGHFIdplssIMSILITTVGILVLIYSDNYMSHDQGYLR 123
Cdd:MTH00199 25 STLKLSIGVLLLIGL-IVELNSLNLFQSDKVLDGTNGLLLTNSWII-----ISKIIIIIGSISILLMGSGETILSEGGQS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 124 FFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSF 203
Cdd:MTH00199 99 SPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGET 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 204 EFQDlfeivNNLIYNNEVHFLVVTLCafLLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFlvarllP 282
Cdd:MTH00199 179 SIQG-----INSILTGDVGKILITIS--LLFKLSAA-----PFHMWAPDVYEGaPTITTALL--ATVPKIGVF------S 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 283 LFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSY---RAGLFHLITHayskALLFLG 359
Cdd:MTH00199 239 ILVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFesiQASLIYMIIY----VIMSIC 314
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2248517097 360 SGSIIHSMEAIVGYspdksqnMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEIL 421
Cdd:MTH00199 315 SFSIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
134-436 |
2.13e-14 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 75.45 E-value: 2.13e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 134 SMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIVN 213
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 214 NLIYNNEVHFLV--VTLCAFLLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLVarllpLFIIIPYI 290
Cdd:MTH00196 85 SGQSFSSVSVPIgyLLIIVALLFKLSVA-----PFHMWAPDVYEGaPTKTTALL--AIVPKLGIFSI-----LVSIGLNV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 291 MNLIsLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSY---RAGLFHLITHAYSKALLFLgsgsiihsm 367
Cdd:MTH00196 153 NILL-IGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFesiQASLVYLFIYIIMSICVFS--------- 222
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2248517097 368 eAIVGYSPDKSQnMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEILNDSWLYSPIFAIIAC 436
Cdd:MTH00196 223 -IILALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLA 289
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
232-453 |
6.57e-14 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 75.07 E-value: 6.57e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 232 LLFAGAVaKSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFLV----------ARLLPLFIIipYIMNLISLIGII 300
Cdd:PRK12561 191 FLIAFGV-KLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLKmggyalirfnVQMLPDAHV--YFAPALAILGVV 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 301 TVLLGATLALAQKDIKRSLAYSTMSQLGYTMlaLGMGSYRA-----GLFHLITHAYSKALLFLGSGsiihsmeaiVGYSP 375
Cdd:PRK12561 261 NIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAMLQMISHGLIAAALFFLTG---------VTYER 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 376 DKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEI---LNDSWLYSPIFAIIacsTAGLTA--FYMFRIY 450
Cdd:PRK12561 330 THTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgITSSDVYSSTFRTI---TILLAAvgLILTPIY 406
|
...
gi 2248517097 451 LLT 453
Cdd:PRK12561 407 LLS 409
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
90-417 |
7.25e-14 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 74.68 E-value: 7.25e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 90 DPLSSIMSILITTVGILVLIYSDNYMSHDQGYLrFFAYMSFfnSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRP 169
Cdd:PRK06277 71 NPAKQIIIFVLSLIASLVLITGLGEKKSSGLYV-FLMLMGL--ASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEE 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 170 iAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDlfeIVNNLIYNNEVHflVVTLCAFLLFAGAVAKSAQFPLHVW 249
Cdd:PRK06277 148 -AYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITD---IHNALLVNPTSP--VIYGGLLLLIFGLLYGSGLPPFHTI 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 250 LPDAMEGPTP-ISALIHA---ATMVAAGIFLVaRLLPLFIIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMS 325
Cdd:PRK06277 222 KSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAIS 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 326 QLGYTMLALGMG---SYRAGLFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMVLMGGLTKHVPITKTAFLLGT 402
Cdd:PRK06277 301 QGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVAFMVLCAK 371
|
330
....*....|....*
gi 2248517097 403 LSLCGFPPLACFWSK 417
Cdd:PRK06277 372 LAISGVPPFNGFQSK 386
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
75-125 |
2.74e-12 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 61.68 E-value: 2.74e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2248517097 75 WTINNDFYFEFGHFIDPLSSIMSILITTVGILVLIYSDNYMSHDQGYLRFF 125
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
82-466 |
1.05e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 64.58 E-value: 1.05e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 82 YFEFGHFIDPLSSIMSILITTVGILVLIYSDNYMsHDQGYLRFFAYMSFFNSSMLGLV---TSSNLIQIYIFWELVGLCS 158
Cdd:MTH00206 50 FSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPT 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 159 YLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFqDLFEIVNNLIYNNEVHFLVVTLcAFLlfagav 238
Cdd:MTH00206 129 LLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSL-YILYFSKLTTWNNNLWWLACIL-AFL------ 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 239 AKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFLVA---RLLPLFIIIPYIMNLISLIGIITVLLGATLA----L 310
Cdd:MTH00206 201 VKLPLYGVHLWLPKAhVEAPV-------AGSMVLAGVLLKLggyGMMRIILILGPSTKLSSYFFIILGLWGSIMTssicL 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 311 AQKDIKRSLAYSTMSQlgytmlalgMGSYRAGLFHLITHAYSKAL-LFLGSGSIIHSMEAIVG--YSPDKSQNMVLMGGL 387
Cdd:MTH00206 274 RQTDLKSLIAYSSVSH---------MSLVTAGILSGSPWGFKGALlLMIAHGLVSSALFCLANllYERSHTRTILGNRGL 344
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2248517097 388 TKHVPITKTAFLLGTLSLCGFPPLACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLNVHFQNYS 466
Cdd:MTH00206 345 QMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLS 423
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
95-447 |
2.52e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 63.40 E-value: 2.52e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 95 IMSILITTVGILVLIYSDNYMSHDqgylrFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPIAANA 174
Cdd:MTH00226 109 ILTGFIVPCSILISWHSVKYLTKS-----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQA 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 175 CQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEiVNNLIYNNEVHFLVVTlcaflLFAGAVAKSAQFPLHVWLPDA- 253
Cdd:MTH00226 184 AYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLAS-CSHVVSEQTQKWIFLG-----IFLAMAVKIPIFPFHIWLPKAh 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 254 MEGPTPISALIHAATMVAAGIFLVARLLPLFII-IPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTML 332
Cdd:MTH00226 258 VEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSI 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 333 AL---GMGSYRAGLFHLITHAYSKALLFLgsgsiihsmEAIVGYSPDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFP 409
Cdd:MTH00226 338 TLvthDIIGLTGSIFIMLAHGIVSSLLFI---------LVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVP 408
|
330 340 350
....*....|....*....|....*....|....*...
gi 2248517097 410 PLACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMF 447
Cdd:MTH00226 409 PSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
224-445 |
1.00e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 61.79 E-value: 1.00e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 224 LVVTLCAFLLFAGAVaKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLLPLF--------------IIIP 288
Cdd:PRK12666 208 LLEAGAALLLVVFLI-KAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLfgpeagasagfgqdWLLP 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 289 yimnlislIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSYR---AGLFHLITHAYSKALLFL------- 358
Cdd:PRK12666 285 --------GGLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlver 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 359 ----GSGSIIHSMEAivgYSPDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEILN---------DSW 425
Cdd:PRK12666 357 qrgaAADRLAVTPEL---YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQallnppgagAAW 433
|
250 260
....*....|....*....|....*.
gi 2248517097 426 LY------SPIFAIIACSTAGLTAFY 445
Cdd:PRK12666 434 WLwalvllSGLAALIALTRAGIRLFW 459
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
240-449 |
4.58e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 59.87 E-value: 4.58e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 240 KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLplfiiipyIMNLISLIGIITVLLGATLALAQKDIKRS 318
Cdd:MTH00198 312 KLAAAPFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTSLVI--------TSKLLLSVAIISLVVGAFGALNQTRIKRL 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 319 LAYSTMSQLGYTMLALGMGSYRaGLFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMVLMGG------------ 386
Cdd:MTH00198 384 LAYSGIGHIGFILIGVSAGTYE-SLQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGSFGNynlvrrlvdlti 462
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2248517097 387 LTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEILNDS----WLYS-PIF---AIIACSTAGLTAFYMFRI 449
Cdd:MTH00198 463 LSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSikiaFSSSlSIYylvALFAIICTCISAFYYIRI 533
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
45-409 |
2.51e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 57.00 E-value: 2.51e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 45 ILLLSIVMILSVDL--SIQQINRSSiyqyvwsWTINNDFYFEFGHFI---DPLS---SIMSILITTVGILVLIYSDNYMs 116
Cdd:MTH00204 39 ILFSTLVLWGAFDGegQFQFINLIE-------WIISPTLNFQWGPLVfavDGVSlffILLTTLLIPICILISWKSIKFL- 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 117 hdqgYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGL 196
Cdd:MTH00204 111 ----FKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQL 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 197 YWITGSFEFQDLFEIvnNLIYNNEVHFLVvtlCAFLLFAgavAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIF 275
Cdd:MTH00204 187 YSITGTTDYQILLNI--KLPLSIQKWLLV---GFFLSLA---VKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYG 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 276 LVARLLPLF-IIIPYIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLAL---GMGSYRAGLFHLITHAY 351
Cdd:MTH00204 259 FLRFSWPLFpAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGF 338
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2248517097 352 SKALLFLGSGSIihsmeaivgYSPDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFP 409
Cdd:MTH00204 339 VSSALFIAVTFL---------YERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFP 387
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
230-453 |
3.10e-08 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 57.02 E-value: 3.10e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 230 AFLLFAGAVaKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIFLV----------ARLLPlfIIIPYIMNLISLIGI 299
Cdd:PRK02546 217 AGLLIAYGV-KLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLKmggyallrmnAGMLP--DAHAQFAPLLIVLGV 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 300 ITVLLGATLALAQKDIKRSLAYSTMSQLGYTMlaLGMGSYRA-----GLFHLITHAYSKALLFLgsgsiihsmeaIVGYS 374
Cdd:PRK02546 288 VNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLFF-----------LVGAT 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 375 PDKSQNMVL--MGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEI---LNDSWLYSPIFAIIACSTAGLTAFyMFRI 449
Cdd:PRK02546 355 YDRTHTLMLdeMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVfvgFATSDAYTLPFRVVVVFLAAVGVI-LTPI 433
|
....
gi 2248517097 450 YLLT 453
Cdd:PRK02546 434 YLLS 437
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
93-411 |
5.55e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 56.34 E-value: 5.55e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 93 SSIMSILITTVGILVLIYSDNYmSHDQGYLRffAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGfwftrpIAA 172
Cdd:PRK06459 46 LSFFSIISTIVWILASLYSIEY-DHYGKWLS--SLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIA------LTK 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 173 NACQKAFVTNRVGDFGLLLGilglywITGsfeFQDLFEIVNNLIYNNEVHFLVVTLCAFllfaGAVAKSAQFPLHV--WL 250
Cdd:PRK06459 117 KNKRPAFVFMAFGELSTVLI------LAG---FAWAFIISGTTNFSYLPSPVPLILASF----GFIIKMGMMPFLVseWL 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 251 PDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIIIP--YIMNLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLG 328
Cdd:PRK06459 184 PIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPigYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNG 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 329 YTMLALG--MGSYRAG-----------LFHLITHAYSKALLFLGSGsiiHSMEAIVGYSPDKSQNMVLMGGltkhvpitk 395
Cdd:PRK06459 264 AILVALGlyMVTKQLItsiehfslitvILYSFAHSVAKTGLFLSSG---LQEKQSITYSKKIRNRWIELGL--------- 331
|
330
....*....|....*.
gi 2248517097 396 tafLLGTLSLCGFPPL 411
Cdd:PRK06459 332 ---TLLASSLSGLLPN 344
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
228-478 |
1.90e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 53.74 E-value: 1.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 228 LCAFLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIIIPYIMnlisLIGIITVLLGAT 307
Cdd:MTH00144 85 FSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLC----VISVLSALVGSI 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 308 LALAQKDIKRSLAYSTMSQLGYtMLALGMGSYRAGLFHLITHAYSKALLFLG-SGSIIHSMEAIVGYSPDKSQNMVLMGG 386
Cdd:MTH00144 161 GGLNQTQVRALLAYSSISHTGW-MLVAILHGSWLMWMYFLIYIVSSGFLFFSlWSGDSGSMKDLGSLKPSYKTGLSIISL 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 387 LtkhvpitktafllgtLSLCGFPPLACFWSKDEILNDSWLYSPIFAIIACSTAGLTA--FYMFRIYLLTFEGhlnvhFQN 464
Cdd:MTH00144 240 L---------------LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISlfFYLSVFFSSFLSS-----SKS 299
|
250
....*....|....
gi 2248517097 465 YSGKKSNSLYSISL 478
Cdd:MTH00144 300 KKSNSSKVLNSSII 313
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
245-423 |
3.02e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 53.29 E-value: 3.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLvarllpLFIIIPYI-MNLISLIGIITVLLGATLALAQKDIKRSLAYST 323
Cdd:MTH00112 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLTL------LLMTSNSLnPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSS 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 324 MSQLGYTMLALGMgSYRAGLFHLITHAYSKALLFLgsgsIIHSMEAIvgyspdKSQNMVLMggLTKhVPITKTAFLLGTL 403
Cdd:MTH00112 184 IAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTTSTK------TLKDMMTS--WTK-SPTLNTTLMLTLL 249
|
170 180
....*....|....*....|
gi 2248517097 404 SLCGFPPLACFWSKDEILND 423
Cdd:MTH00112 250 SLAGLPPLTGFMPKWLILQE 269
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
26-464 |
1.59e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 51.11 E-value: 1.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 26 LLLFPTeTKKLRRMWAFPSILLLSIVMILsvdLSIQQINRSSIYQyvwsWTINNDFYFefghfIDPLSSIMSILITTVGI 105
Cdd:MTH00127 9 LMLIPT-TWLTPAKWLWTTTLAHSLLIAL---ASLTWLKNLSETG----WSSLNLYMA-----TDPLSTPLLVLTCWLLP 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 106 LVLIYSDNYMSHdQGYLRFFAYMSFFNSSMLGLV---TSSNLIQIYIFWELVGLCSYLLIGFWFTRPIAANACQKAFVTN 182
Cdd:MTH00127 76 LMILASQNHTAP-EPINRQRMYITLLTSLQIFLIlafGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYT 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 183 RVGDFGLLLGILGLYWITGSFEFQDLfEIVNNLIYNNEVHFLVVTLC--AFLLfagavaKSAQFPLHVWLPDAMEGPTPI 260
Cdd:MTH00127 155 LAGSLPLLVALLLLQNSTGTLSMLTL-QYSQPLQLSSWADKLWWAGCllAFLV------KMPLYGVHLWLPKAHVEAPIA 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 261 SALIHAATMVAAGIFLVARLL----PLFIIIPYIMNLISLIGIItvlLGATLALAQKDIKRSLAYSTMSQLGYT---MLA 333
Cdd:MTH00127 228 GSMVLAAVLLKLGGYGMMRMMvmldPLTKELSYPFIILALWGII---MTGSICLRQTDLKSLIAYSSVSHMGLVaggILI 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 334 LGMGSYRAGLFHLITHAYSKALLFLgsgsiihsmEAIVGYSPDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGFPPLAC 413
Cdd:MTH00127 305 QTPWGFTGALILMIAHGLTSSALFC---------LANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPN 375
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 2248517097 414 FWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLNVHFQN 464
Cdd:MTH00127 376 LMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIA 426
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
87-332 |
2.43e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 50.55 E-value: 2.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 87 HFIDPLSSIMSILITTVGILVLIYSDN--------YMSHDQGYLrFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCS 158
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 159 YLLIGFWfTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFefqDLFEIVNNLIYNNEVHFLVVTLCAFLLfaGAV 238
Cdd:PRK06591 152 YVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSL---NMTDIAAYLQEHTNSRIITIAIGFFLI--GAI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 239 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLlpLFIIIPY------IMNLISLIGIITVLLGATLALAQ 312
Cdd:PRK06591 226 LKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKF--TYIIIGYetiktaITNFIRPIALATLIIAPYFAYQA 303
|
250 260
....*....|....*....|
gi 2248517097 313 KDIKRSLAYSTMSQLGYTML 332
Cdd:PRK06591 304 KNFKNIIIYSCFTQIGYVFL 323
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
135-450 |
2.71e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 50.44 E-value: 2.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 135 MLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFeivnN 214
Cdd:MTH00217 122 LMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC----C 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 215 LIYNNEVHFLVvtlcaFLLFAGAVA-KSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLF-IIIPYIM 291
Cdd:MTH00217 198 LKIEKELQYFI-----FLGFFLSLAiKIPKIPFHIWLPQAhVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLpEASEYFS 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 292 NLISLIGIITVLLGATLALAQKDIKRSLAYSTMSQLGYTMLalgmgsyraGLF-HLITHAYSKALLFLGSGSIIHSMEAI 370
Cdd:MTH00217 273 PLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTL---------GIFsHTIQGLVAAIFLMLAHGLVSSALFIA 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 371 VGYSPDKSQNMVL--MGGLTKHVPITKTAFLLGTLSLCGFpPLAC-FWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMF 447
Cdd:MTH00217 344 VTFLYERHHTRLIkyYRGMVITMPLFGILMLLLVLANASI-PLSCnFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSI 422
|
...
gi 2248517097 448 RIY 450
Cdd:MTH00217 423 YLY 425
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
230-449 |
4.87e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 49.20 E-value: 4.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 230 AFLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagiFLVARLLPLFII---IPYIMNLISL--IGIITVLL 304
Cdd:MTH00200 95 ETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLI----------LSTWQKLAPFALliqLAPALNSNILllLGLLSVLV 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 305 GATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSYRAGLFHLITHAYSKALLFLgsgsiihsmeaivgYSPDKSQNMVLM 384
Cdd:MTH00200 165 GGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL--------------LNLLNSTKINSL 230
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2248517097 385 GGLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEILNDSWLYS-PIFAIIACSTAGLTAFYMFRI 449
Cdd:MTH00200 231 SSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGlFIYATILLLGSLLSLFFYLRL 296
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
227-480 |
7.03e-06 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 48.77 E-value: 7.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 227 TLCAFLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIIIPYI----MNLISLIGIITV 302
Cdd:MTH00041 92 TLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLI---------IATWQKIAPLILLISISnllnSNILILCGILSV 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 303 LLGATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSYRAGLFHLITHAYSKALLFLGSGSIIHSMEAIvgyspdksqnmv 382
Cdd:MTH00041 163 LVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHL------------ 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 383 lmGGLTKHVPITKTAFLLGTLSLCGFPPLACFWSK-----DEILNDSWLYSPIFAIIACstagLTAFYMFRI----YLLT 453
Cdd:MTH00041 231 --NKLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCLIQNNSILISIILIIGSL----LSLFFYLRIsfntSLTL 304
|
250 260 270
....*....|....*....|....*....|....
gi 2248517097 454 FEGHL-------NVHFQNYSGKKSNSLYSISLWG 480
Cdd:MTH00041 305 FPQHSislfswrNSGNITVYGVILSILSSISILG 338
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
227-478 |
1.22e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 48.13 E-value: 1.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 227 TLCAFLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIIIPYIMNLISLI--GIITVLL 304
Cdd:MTH00197 79 LLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFL---------LATWQKLAPLLILAFNSSSFMGLLicSVLSSLI 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 305 GATLALAQKDIKRSLAYSTMSQLGYTMLALGMGSYRAGLFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMVLm 384
Cdd:MTH00197 150 GGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVF- 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 385 ggltkhvpitktaFLLGTLSLCGFPPLACFWSKDEILNdSWLYSPIFAIIACSTAG--LTAFYMFRIYLLTFeghLNVHF 462
Cdd:MTH00197 229 -------------LGLSFLSLGGLPPLSGFFLKWLILT-SLLSSNISLITFMLILStcFSLYYYLSLAYKSL---ILSNW 291
|
250
....*....|....*.
gi 2248517097 463 QNYSGKKSNSLYSISL 478
Cdd:MTH00197 292 MINFLMKINLLYSGLF 307
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
88-456 |
1.80e-05 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 47.81 E-value: 1.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 88 FIDPLSSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFT 167
Cdd:MTH00014 56 SSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGY 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 168 RPIAANAcqkafvtnrvgdfgllLGILGLYWITGSFEFqdLFEIVNNLIYNNEVHFLVVT----------LCAFLLFAGA 237
Cdd:MTH00014 136 QPERLQA----------------SFYLMIYTVTASLPL--LMSILLIFYTNNSLSMLMSSmeppsiylmnLWWLITILAF 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 238 VAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFLVA---RLLPLFIIIPYIMNLISLIGIITVLLGATLA---- 309
Cdd:MTH00014 198 MVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLKLggyGLLRMSSLFMHINKSLSAPFSSISLVGAVITslic 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 310 LAQKDIKRSLAYSTMSQLGYtMLALGMGS----YRAGLFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMVLMG 385
Cdd:MTH00014 271 IRQPDLKSLIAYSSVGHMGL-MTAGIMSNtswgWQGALAMMIAHGLCSSALFALANMT---------YETTHTRSLFLTK 340
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2248517097 386 GLTKHVPITKTAFLLGTLSLCGFPPLACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLTFEG 456
Cdd:MTH00014 341 GLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFLYTSTQHG 411
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
7-398 |
2.43e-05 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 47.63 E-value: 2.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 7 YSWIIPFVPLPvpILIGVGLLLFPTETKKLRRmWAFPSILLLSIVMILSVDLSIQQINRSSIyQYV--WSWTINNDFYFE 84
Cdd:CHL00011 4 FPWLTIIVVLP--IFAGSLIFFLPHRGNKVIR-WYTLCICLLELLLTTYAFCYHFQLDDPLI-QLKedYKWINFFDFHWR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 85 FGhfIDPLSsIMSIL----ITTVGILVL--IYSDNYMshdqgylrFFAYMSFFNSSMLGLVTSSNLIQIYIFWELVGLCS 158
Cdd:CHL00011 80 LG--IDGLS-IGPILltgfITTLATLAAwpVTRNSRL--------FYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPV 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 159 YLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWitGSFEFQDLFEIVNNLIY--NNEVHFLVVTLCAFllfag 236
Cdd:CHL00011 149 YLLLSMWGGKKRLYSATKFILYTAGGSIFLLIGVLGMGLY--GSNEPTLNFETLANQSYpvALEILFYIGFLIAY----- 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 237 AVaKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVA----------RLLP--LFIIIPYIMnlisLIGIITVL 303
Cdd:CHL00011 222 AV-KLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMgayglirinmELLPhaHSIFSPWLV----IVGAIQII 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 304 LGATLALAQKDIKRSLAYSTMSQLGYTMlaLGMGSYR-AGL----FHLITHAYSKALLFLgsgsiihsmeaIVGYSPDKS 378
Cdd:CHL00011 290 YAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSITdTGLngaiLQIISHGFIGAALFF-----------LAGTSYDRI 356
|
410 420
....*....|....*....|..
gi 2248517097 379 QNMVL--MGGLTKHVPITKTAF 398
Cdd:CHL00011 357 RLVYLdeMGGIAIPMPKIFTMF 378
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
88-461 |
3.99e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 46.83 E-value: 3.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 88 FIDPLSSIMSILITTVGILVLIYSDNYMSHD-QGYLRFFAYMSFFNSSMLGLV-TSSNLIQIYIFWELVGLCSYLLIGFW 165
Cdd:MTH00068 57 GIDQISSPLLILTCWLLPLMILASQNHLKNEpINRQRTYISMLIILQLTLILAfSATELILFYIFFEATLIPTLIIITRW 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 166 FTRPIAANACQK-AFVTnRVGDFGLLLGILGLYWITGS--FEFQDLFEIVNNLIYNNEVhFLVVTLCAFLLfagavaKSA 242
Cdd:MTH00068 137 GNQEERLNAGTYfLFYT-LAGSLPLLIALLILQNSLGSlsLILLELMSPMQLMTYTNKI-WWLACLLAFMV------KMP 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 243 QFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL---------VARLL-PLFIIIPYIMNLISLIGiitVLLGATLALA 311
Cdd:MTH00068 209 LYGLHLWLPKAhVEAPI-------AGSMILAAVLLklggygilrISILLtPLSKELSYPFIILALWG---VLMTSLICLR 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 312 QKDIKRSLAYSTMSQLGYTMLALGMG---SYRAGLFHLITHAY-SKALLFLgsgsiihsmeAIVGYSPDKSQNMVLMGGL 387
Cdd:MTH00068 279 QTDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCL----------ANTNYERTHSRTLLLLRGA 348
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2248517097 388 TKHVPITKTAFLLGTLSLCGFPPLACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLNVH 461
Cdd:MTH00068 349 QTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNH 422
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
228-434 |
8.20e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 42.80 E-value: 8.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 228 LCAFLLFAGAVAKSAQFPLHVWLPDAMEgptpiSALIHAATMVAAGIFLVARLLPLFIIipYIMNLISLIGIITVLLGAT 307
Cdd:PRK12664 145 YCKLLFMLGLLINCACFPASSWVVDAYP-----AASNFGIIVLSLFTTKVAALVLLLFF--SGEEILLFLGIITAIYGII 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 308 LALAQKDIKRSLAYSTMSQLGYTMLALGMGS-----YRAGLFHLITHAYSKALLFLGSGSIIHSMEAIvgyspdksqNMV 382
Cdd:PRK12664 218 FASLEQNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVINRTRKF---------NLN 288
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 2248517097 383 LMGGLTKhVPITKTAFLLGTLSLCGFPPLACFWSKDEILNDSWLYSPIFAII 434
Cdd:PRK12664 289 RVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLY 339
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
230-449 |
5.04e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 39.76 E-value: 5.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 230 AFLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfiiipYIMNLISLIGIITVLLGATLA 309
Cdd:MTH00011 91 ALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGLGG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2248517097 310 LAQKDIKRSLAYSTMSQLGYTMLAlgmgsyraglfhlITHAYSKALLFLGSGSIIHS-MEAIVGYSPDKSQNMvlMGGLT 388
Cdd:MTH00011 166 MNQTQLRPLLAYSSIGHMGWMTMI-------------SVFSPSMAILYFMTYIIITTpLMLLFAYLNAFSTKF--NSKIS 230
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2248517097 389 KHVPITKTAFLLGTLSLCGFPPLACF---WSKDEILNDSWLYSPIFAIIACSTAGLtaFYMFRI 449
Cdd:MTH00011 231 SMSQTTSMSLFIMLLSLGGLPPFTGFmpkLMAIETLTSNSMILILLVLIVGSLMNL--FYYLNL 292
|
|
| |
