|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 690.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 1 MLKVLIPTIMLFPTICFVPPKWLWTTTITQSLFIALISLSWLKWTLDIGWAASNTYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 81 SQNHISPEPTHRQRLYIALLTSLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 161 LLVALLLLQQSSGTLSMLMLLNAETTLASSWSHKIWWVGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLG 240
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 241 GYGMMRIMVTLGPLSQQLVYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAH 320
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 321 GLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGVG 400
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2301263218 401 TLITASYSLYMFLMSQRGQTPSHTINLTPSHTREHLLIALHLIPMMLLIAKPELMWGWC 459
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 672.68 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 1 MLKVLIPTIMLFPTICFVPPKWLWTTTITQSLFIALISLSWLKWTLdIGWAASNTYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPY-YPTKNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 81 SQNHISPEPTHRQRLYIALLTSLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00124 80 SQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 161 LLVALLLLQQSSGTLSMLMLLNAETTLASSWSHKIWWVGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLG 240
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 241 GYGMMRIMVTLGPLSQQLVYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAH 320
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 321 GLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGVG 400
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2301263218 401 TLITASYSLYMFLMSQRGQTPSHTINLTPSHTREHLLIALHLIPMMLLIAKPELMWGW 458
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 668.55 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 1 MLKVLIPTIMLFPTICFVPPKWLWTTTITQSLFIALISLSWLKWTLDiGWAASNTYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSE-TMNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 81 SQNHISPEPTHRQRLYIALLTSLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00068 80 SQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 161 LLVALLLLQQSSGTLSMLMLLNAETTLASSWSHKIWWVGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLG 240
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 241 GYGMMRIMVTLGPLSQQLVYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAH 320
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 321 GLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGVG 400
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2301263218 401 TLITASYSLYMFLMSQRGQTPSHTINLTPSHTREHLLIALHLIPMMLLIAKPELMWGW 458
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-460 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 627.31 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 1 MLKVLIPTIMLFPTICFVPPKWLWTTTITQSLFIALISLSWLKWTLDIGWAASNTYlATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLF-FSDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 81 SQNHISPEPTHRQRLYIALLTSLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00110 80 SQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 161 LLVALLLLQQSSGTLSMLMLLNAETTLASSWSHKIWWVGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLG 240
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 241 GYGMMRIMVTLGPLSQQLVYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAH 320
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 321 GLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGVG 400
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 401 TLITASYSLYMFLMSQRGQTPSHTINLTPSHTREHLLIALHLIPMMLLIAKPELMWGWCY 460
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-455 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 551.85 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 3 KVLIPTIMLFPTICFVPPKWLWTTTITQSLFIALISLSWLKWTLDIGWAASNTYLATDPLSTPLLVLTCWLLPLMILASQ 82
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 83 NHISPEPTHRQRLYIALLTSLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLL 162
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 163 VALLLLQQSSGTLSMLMLLnaeTTLASSWSHKIWWVGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGY 242
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILY---FSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 243 GMMRIMVTLGPLSQQLVYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGL 322
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 323 TSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGVGTL 402
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2301263218 403 ITASYSLYMFLMSQRGQTPSHTINLTPSHTREHLLIALHLIPMMLLIAKPELM 455
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
3.28e-170 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 486.02 E-value: 3.28e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 1 MLKVLIPTIMLFPTICFVPPKWLWTTTITQSLFIALISLSWLKWTLDIGWAASNTYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 81 SQNHISPEPTHRQRLYIALLTSLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 161 LLVALLLLQQSSGTLSMLMLLNAETTLASSWSHKIWWVGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLG 240
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 241 GYGMMRIMVTLG-PLSQQLVYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVA 319
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 320 HGLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGV 399
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 2301263218 400 GTLITASYSLYMFLMSQRGQTPSHTINLTPSHTREHLLIALHLIPMMLLIAKPELM 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNII 456
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
49-459 |
6.36e-132 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 387.27 E-value: 6.36e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 49 GWAASNTYLATDPLSTPLLVLTCWLLPLMILASQNHISPEPTHRqrLYIALLTSLQTFLIMAFGATEIIMFYVMFEATLI 128
Cdd:MTH00150 12 SYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSS--SFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 129 PTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSSGTLSMLMLLNAETTLASSWshkIWWVGCLIAFLVKM 208
Cdd:MTH00150 90 PTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLLVFLAFLVKL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 209 PLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTLGPLSQQLVYPFMILALWGIIMTGLMCLRQTDLKSLIA 288
Cdd:MTH00150 167 PMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 289 YSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAVWWFLANLANL 368
Cdd:MTH00150 247 YSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINM 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 369 AMPPLPNLMGELMIITALFNWSPWTVALTGVGTLITASYSLYMFLMSQRGQTPSHTINLTPSHTREHLLIALHLIPMMLL 448
Cdd:MTH00150 327 AAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLL 406
|
410
....*....|.
gi 2301263218 449 IAKPELMWGWC 459
Cdd:MTH00150 407 ILKSDLLFMWI 417
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
2.34e-125 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 371.41 E-value: 2.34e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 1 MLKVLIPTIMLFPtICFVPPKWLwtttITQSLFIALISLSWLKWTLDIGWAASNTYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00163 1 MLKFLFMLLFLIP-LCFLKNSWW----LVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 81 SQNHISPEptHRQRLYIALLTSLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00163 76 SESVYKKN--NYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 161 LLVALLLLQQSSGTLSMLMLLNaettlaSSWSHKIWWVGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLG 240
Cdd:MTH00163 154 LLVGIFYLYNNSGSLSFFLLNF------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 241 GYGMMRIMVTLGPLSQQLVYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAH 320
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGH 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 321 GLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGVG 400
Cdd:MTH00163 308 GLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLL 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2301263218 401 TLITASYSLYMFLMSQRGQTPSHTINLTPSHTREHLLIALHLIPMMLLIAKPELMWGW 458
Cdd:MTH00163 388 SFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-458 |
6.67e-116 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 347.50 E-value: 6.67e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 1 MLKVLIPTIMLFPtICFVPPKWLWTTTITQSLFIALISLSWLkWTLDIGWAASNTYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00014 1 MLKLIMPLISLLL-LPLIKYPWSWALTFSTLLLLSLFTLLNL-YPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 81 S----QNHISPEpthrqrLYIALLTSLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLA 156
Cdd:MTH00014 79 SfkifQNNKAPK------TFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVT 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 157 GSLPLLVALLLLQQSSGTLSMLMLlnaETTLASSWSHKIWWVGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVL 236
Cdd:MTH00014 153 ASLPLLMSILLIFYTNNSLSMLMS---SMEPPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGIL 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 237 LKLGGYGMMRIMVTLGPLSQQLVYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIIL 316
Cdd:MTH00014 230 LKLGGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAM 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 317 MVAHGLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVAL 396
Cdd:MTH00014 310 MIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAIL 389
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2301263218 397 TGVGTLITASYSLYMFLMSQRGQTPSHTINLTPSHTREHLLIALHLIPMMLLIAKPELMWGW 458
Cdd:MTH00014 390 LAITSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNW 451
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
4-454 |
4.60e-113 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 340.03 E-value: 4.60e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 4 VLIPTIMLFPTICFVPPKWLWTTtITQSLFIALISLSWLKWTLDIGWAASNTYLATDPLSTPLLVLTCWLLPLMILASQN 83
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSF-FSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYK 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 84 HIspEPTHRQRLYIALLTSLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLLV 163
Cdd:MTH00205 80 VF--KSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLI 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 164 ALLLLQQSSGTLSMLMLLNAETtlaSSWSHKIWWVGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYG 243
Cdd:MTH00205 158 GLFFLNSLNFSLSMFFNFPLNF---SDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 244 MMRIMVTLGPLSQQLVYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLT 323
Cdd:MTH00205 235 LIRITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLC 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 324 SSALFCLANTSYERTHSRTMVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGVGTLI 403
Cdd:MTH00205 315 SSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFL 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 2301263218 404 TASYSLYMFLMSQRGQTPSHTINLTPSHTREHLLIALHLIPMMLLIAKPEL 454
Cdd:MTH00205 395 SGAYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKI 445
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-448 |
9.10e-93 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 289.29 E-value: 9.10e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 38 SLSWLKwTLDIGWAasntyLATDPLSTPLLVLTCWLLPLMILASQNHIspepTHRQRLYIALLTSLQTFLIMAFGATEII 117
Cdd:COG1008 65 SYPWIP-SLGISYH-----LGVDGISLPLVLLTALLTPLAILASWNEI----KKRPKLYYALLLLLEAGMIGVFLALDLF 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 118 MFYVMFEATLIPTLIIITRWGNQNeRLNAGTYFLFYTLAGSLPLLVALLLLQQSSGTLSMLMLLNAETTLASSWShKIWW 197
Cdd:COG1008 135 LFYVFWELMLIPMYFLIGIWGGER-RIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQ-LLLF 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 198 VGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTLGPL-SQQLVYPFMILALWGIIMTGLM 276
Cdd:COG1008 213 LAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALV 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 277 CLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLM 356
Cdd:COG1008 293 ALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVL 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 357 AVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGVGTLITASYSLYMFlmsQR---GQTPSHTINLTPSHTR 433
Cdd:COG1008 373 AALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY---QRvffGPLKEELAELPDLNPR 449
|
410
....*....|....*
gi 2301263218 434 EHLLIALHLIPMMLL 448
Cdd:COG1008 450 ELAVLAPLAALILLL 464
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
56-449 |
2.96e-84 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 267.45 E-value: 2.96e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 56 YLATDPLSTPLLVLTCWLLPLMILASQNHIspepTHRQRLYIALLTSLQTFLIMAFGATEIIMFYVMFEATLIPTLIIIT 135
Cdd:PRK05846 77 HLGVDGISLLLVVLTALLTPLAVLASWEEI----KKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 136 RWGNQNeRLNAGTYFLFYTLAGSLPL----LVALLLLQQSSGTLSMLMLLNAEttlASSWSHKIWWVGCLIAFLVKMPLY 211
Cdd:PRK05846 153 VWGGKN-RIYAATKFFLYTLLGSLLMlvaiIYLVVVYYNATGTFDIADLLNLP---LPPGVQYWLFLAFFIAFAVKMPMF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 212 GVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTLGPL-SQQLVYPFMILALWGIIMTGLMCLRQTDLKSLIAYS 290
Cdd:PRK05846 229 PLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 291 SVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAVWWFLANLANLAM 370
Cdd:PRK05846 309 SISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGL 388
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2301263218 371 PPLPNLMGELMIITALFNWSPWTVALTGVGTLITASYSLYMFLMSQRGQTPSHTINLTPSHTREhLLIALHLIPMMLLI 449
Cdd:PRK05846 389 PGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRE-LLILLPLVALLLLL 466
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
23-412 |
1.76e-80 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 257.18 E-value: 1.76e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 23 LWTTTITQSLFIALISLSWLKwTLDIGWAasntyLATDPLSTPLLVLTCWLLPLMILASQNHIspepTHRQRLYIALLTS 102
Cdd:TIGR01972 45 LFQFDPTGSGFQFTEDIPWIP-ALGISYH-----LGVDGISLLLVLLTALLTLLAILASWESI----QKRVKEFYALLLL 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 103 LQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQNeRLNAGTYFLFYTLAGSLPLLVALLLLQ-QSSGTLSMLMLL 181
Cdd:TIGR01972 115 LEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPN-RIYAAMKFFLYTLAGSLLMLLAILGLYfLGGGTFDLLELL 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 182 NAETTLassWSHKIWWVGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTLGP-LSQQLVY 260
Cdd:TIGR01972 194 NLPLPF---GVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAP 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 261 PFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHS 340
Cdd:TIGR01972 271 VLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHT 350
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2301263218 341 RTMVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGVGTLITASYSLYMF 412
Cdd:TIGR01972 351 RDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
23-412 |
1.52e-76 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 247.28 E-value: 1.52e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 23 LWTTTITQSLFIALISLSWL-KWTLDIGWaaSNTYLATDPLSTPLLVLTCWLLPLMILASQNHIspepTHRQRLYIALLT 101
Cdd:MTH00204 46 LWGAFDGEGQFQFINLIEWIiSPTLNFQW--GPLVFAVDGVSLFFILLTTLLIPICILISWKSI----KFLFKEFLLCLL 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 102 SLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSSGTLSMLMLL 181
Cdd:MTH00204 120 FLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 182 NAETtlasSWSHKIW-WVGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTLGPLSQQLVY 260
Cdd:MTH00204 200 NIKL----PLSIQKWlLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFA 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 261 PFMI-LALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTH 339
Cdd:MTH00204 276 PLIVmLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHH 355
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2301263218 340 SRTMVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGVGTLITASYSLYMF 412
Cdd:MTH00204 356 TRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
23-412 |
1.29e-71 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 234.18 E-value: 1.29e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 23 LWTTTITQSLFIALISLSWLkwtLDIGWAASNTYLATDPLSTPLLVLTCWLLPLMILASQNHISpeptHRQRLYIALLTS 102
Cdd:MTH00217 45 LWASFDGEGQFQAIKKFEWI---PGIEPVFGPVVFAVDGISIFFLILTALLTPICILISWNSIK----FLIKEFLLCLLV 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 103 LQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSSGTLSMLMLLN 182
Cdd:MTH00217 118 IEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCC 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 183 AEttLASSWSHKIWwVGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTLGPLSQQLVYPF 262
Cdd:MTH00217 198 LK--IEKELQYFIF-LGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPL 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 263 -MILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSR 341
Cdd:MTH00217 275 iQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTR 354
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2301263218 342 TMVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGVGTLITASYSLYMF 412
Cdd:MTH00217 355 LIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-401 |
2.13e-68 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 219.88 E-value: 2.13e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 113 ATEIIMFYVMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSSGTLSMLMLLNAETTLASSWS 192
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 193 HKIWWVGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTLGPLSQQLVYPFMILALWGIIM 272
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 273 TGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLA-NTSYERTHSRTMVLARGMQM 351
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2301263218 352 IFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGVGT 401
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
57-410 |
3.51e-64 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 215.17 E-value: 3.51e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 57 LATDPLSTPLLVLTCWLLPLMILASQNHISpeptHRQRLYIALLTSLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITR 136
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWHSVK----YLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 137 WGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSSGTLSMLMLLNAeTTLASSWSHKIWWVGCLIAFLVKMPLYGVHLW 216
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIW 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 217 LPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTLGPLSQQLVYPFMI-LALWGIIMTGLMCLRQTDLKSLIAYSSVGHM 295
Cdd:MTH00226 253 LPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIaMGIVGIVYGSFATCRQIDVKRLVAYSSVAHM 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 296 GLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAVWWFLANLANLAMPPLPN 375
Cdd:MTH00226 333 GLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGN 412
|
330 340 350
....*....|....*....|....*....|....*
gi 2301263218 376 LMGELMIITALFNWSPWTVALTGVGTLITASYSLY 410
Cdd:MTH00226 413 FIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
38-411 |
1.70e-54 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 189.47 E-value: 1.70e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 38 SLSWLKwTLDIGWAasntyLATDPLSTPLLVLTCWLLPLMILASQNhispePTHRQRLYIALLTSLQTFLIMAFGATEII 117
Cdd:PRK12561 42 RYAWLP-QIGLEWS-----LGVDGLSMPLVLLSGLITTLSIFASWK-----VTRKPRLFYFLMLVLYSAQIGVFLAQDLL 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 118 MFYVMFEATLIPTLIIITRWGNQNeRLNAGTYFLFYTLAGSLPLLVALLLLQQSSG--TLSMLMLLNAETTLASSWshkI 195
Cdd:PRK12561 111 LFFLMWELELVPVYLLISIWGGQK-RLYAATKFILYTALASIFILVAGLALALSGDtfTFDLAELGAKSYPLALEL---L 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 196 WWVGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTLGPLSQQLVYP-FMILALWGIIMTG 274
Cdd:PRK12561 187 LYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPaLAILGVVNIIYGA 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 275 LMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMV----LARGMQ 350
Cdd:PRK12561 267 LNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPnmggLAKVMP 346
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2301263218 351 MIFPLmavwwFLAN-LANLAMPPLPNLMGELMI---ITALFNWSPW----TVALTGVGTLITASYSLYM 411
Cdd:PRK12561 347 KTFAL-----FTASsMASLALPGMSGFVSELTVflgITSSDVYSSTfrtiTILLAAVGLILTPIYLLSM 410
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-416 |
3.07e-49 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 173.79 E-value: 3.07e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 1 MLKVLIPTIMLFPTICF-VPPKWLWTTTITQSLFIALISLSWLKWTLDIG--------WAAS-NTYLATDPLSTPLLVLT 70
Cdd:COG0651 6 ILPVLLPLLAAALLLLLgRRRRLQRALSLLASLALLALALALLLQVLAGGplvyalggWPAPfGIVLVADRLSALFLLLT 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 71 CWLLPLMILASQNHISPEptHRQRLYIALLTSLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQnERLNAGTYF 150
Cdd:COG0651 86 ALVALAVLLYSIGYMRHE--RRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK-EALRAGLKY 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 151 LFYTLAGSLPLLVALLLLQQSSGTLSMLMLLNAETTLASSWSHKIWWVgCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSM 230
Cdd:COG0651 163 LILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFAL-LLVGFGIKAALFPLHFWLPDAYPAAPSPVSA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 231 ILAAVLLKLGGYGMMRIMVTLGPLSQQLV--YPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPW 308
Cdd:COG0651 242 LLSGLLTKVGVYAILRVLTLLFGADPALFlgTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPL 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 309 GFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFN 388
Cdd:COG0651 322 GLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALE 401
|
410 420
....*....|....*....|....*....
gi 2301263218 389 -WSPWTVALTGVGTLITASYSLYMFLMSQ 416
Cdd:COG0651 402 aGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
38-455 |
7.24e-47 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 169.50 E-value: 7.24e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 38 SLSWLKwTLDIGWAasntyLATDPLSTPLLVLTCWLLPLMILASQnhispEPTHRQRLYIALLTSLQTFLIMAFGATEII 117
Cdd:PRK02546 70 SYSWLP-QLGLTWS-----VGADGLSMPLILLTGFITTLAVLAAW-----PVTFKPKLFYFLMLAMYGGQIAVFAVQDML 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 118 MFYVMFEATLIPTLIIITRWGNQNeRLNAGTYFLFYTLAGSLPLLVALLLLQQSSGTLSMLMLLNAETTLASSWsHKIWW 197
Cdd:PRK02546 139 LFFLAWELELIPVYLLLAIWGGKK-RQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGF-QLLCY 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 198 VGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTLGPLSQQLVYPFMI-LALWGIIMTGLM 276
Cdd:PRK02546 217 AGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIvLGVVNIIYAALT 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 277 CLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLM 356
Cdd:PRK02546 297 SFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKM 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 357 AVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWT-------VALTGVGTLITASYSLYM----FLMSQRGQTPSHTi 425
Cdd:PRK02546 377 FAMWTACSLASLALPGMSGFVAELMVFVGFATSDAYTlpfrvvvVFLAAVGVILTPIYLLSMlreiFFGPENKELVSHE- 455
|
410 420 430
....*....|....*....|....*....|
gi 2301263218 426 NLTPSHTREHLLIALHLIPMMLLIAKPELM 455
Cdd:PRK02546 456 KLVDAEPREVFIIACLLVPIIGIGLYPKLV 485
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
99-410 |
6.57e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 158.92 E-value: 6.57e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 99 LLTSLQTFLIMAFGATE-IIMFYVMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLLVALLllqqssgtLSM 177
Cdd:MTH00094 66 ILSNLLILICLLFFVSSnMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL--------KNF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 178 LMLLNAETTLASSWSHKIWWVGCliaFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMvtlGPLSQQ 257
Cdd:MTH00094 138 FFFSLCYFDFFLSWEMFFILSLS---FMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRIL---GSLNFV 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 258 LVYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYER 337
Cdd:MTH00094 212 YNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHI 291
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2301263218 338 THSRTMVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGVGTLITASYSLY 410
Cdd:MTH00094 292 SKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLF 364
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
57-411 |
6.35e-41 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 152.79 E-value: 6.35e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 57 LATDPLSTPLLVLTCWLLPLMILASQnhispePTHRQ-RLYIALLTSLQTFLIMAFGATEIIMFYVMFEATLIPTLIIIT 135
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 136 RWGNQnERLNAGTYFLFYTLAGSLPLLvallllqqsSGTLSM------LMLLNAETTLASSWS---HKIWWVGCLIAFLV 206
Cdd:CHL00011 154 MWGGK-KRLYSATKFILYTAGGSIFLL---------IGVLGMglygsnEPTLNFETLANQSYPvalEILFYIGFLIAYAV 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 207 KMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTLGPLSQQLVYPF-MILALWGIIMTGLMCLRQTDLKS 285
Cdd:CHL00011 224 KLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWlVIVGAIQIIYAASTSLGQRNLKK 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 286 LIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERThsRTMVLAR--GMQMIFPLMAVWWFLA 363
Cdd:CHL00011 304 RIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSF 381
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2301263218 364 NLANLAMPPLPNLMGELM----IITA---LFNWSPWTVALTGVGTLITASYSLYM 411
Cdd:CHL00011 382 SMASLALPGMSGFVAELIvffgIITSqkyLLMPKILITFVMAIGMILTPIYLLSM 436
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
54-458 |
2.22e-40 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 151.39 E-value: 2.22e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 54 NTYLATDPLSTPLLVLTCWLLPLMILASQNHIspeptHRQRLYIALLTSLQTFLIMAFGATEIIMFYVMFEATLIPTLII 133
Cdd:PRK06473 72 SYHLGVDGLSLPLLVLNSLLTLIAIYSSDESI-----QRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 134 ITRWGNQNeRLNAGTYFLFYTLAGSLPLLVALLLLQQSSGTLSMLMLLNAETTLASSwSHKIWWVGCLIAFLVKMPLYGV 213
Cdd:PRK06473 147 IAIWGGQR-RGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 214 HLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTLGPLSQQLVYPFM-ILALWGIIMTGLMCLRQTDLKSLIAYSSV 292
Cdd:PRK06473 225 HTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMVAYSSI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 293 GHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMVLARGM---QMIFPLMAVWWFLANLANLA 369
Cdd:PRK06473 305 GHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAG 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 370 MPPLPNLMGELMIITALFNWSPWTVALTGVGTLITASYSLYMFLMSQRGQTPSHTINLTPSHTREHLLIALHLIPMMLLI 449
Cdd:PRK06473 385 IPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPRVLWSERLPALVLAVLIVVLG 464
|
....*....
gi 2301263218 450 AKPELMWGW 458
Cdd:PRK06473 465 IQPSWLVRW 473
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
41-407 |
4.92e-31 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 124.82 E-value: 4.92e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 41 WLKWTLDIGWAASntyLATDPLSTPLLVLTCWLLPLMILASQnhispEPTHRQRLYIALLTSLQTFLIMAFGATEIIMFY 120
Cdd:PRK07363 62 YLPWNEPLGLSYS---LGVDGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFF 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 121 VMFEATLIPTLIIITRWGNQnERLNAGTYFLFYTLAGSLPLLVALLLLQQSSGTLSMLMllNAETTLASSWSHK-IWWVG 199
Cdd:PRK07363 134 LFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDY--DAISTQNLSLNTQlILLTG 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 200 CLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTLGPLSQQLVYPfmILALWG---IIMTGLM 276
Cdd:PRK07363 211 LLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGtisVIYGALS 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 277 CLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTM-VLARGMQMI--F 353
Cdd:PRK07363 289 AIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLdVLNGLMNPIrgL 368
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2301263218 354 PLMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGVGTLITASY 407
Cdd:PRK07363 369 PLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY 422
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-110 |
4.60e-30 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 112.62 E-value: 4.60e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 1 MLKVLIPTIMLFPTICFVPPKWLWTTTITQSLFIALISLSWLKWTLDIGWAASNTYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 2301263218 81 SQNHISPEPTHRQRLYIALLTSLQTFLIMA 110
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-407 |
1.54e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 117.67 E-value: 1.54e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 2 LKVLIPtiMLFPTICFVPPKWL---WTTTITQSLFIALISLSWLKWTLD--------IGWAA-SNTYLATDPLSTPLLVL 69
Cdd:PRK08375 8 LLVAVP--LLAAALIVLLPKRRrlrWALALLVAALTFALAISLLPQVLDggviayvvGGWPPgIGIELRADSLSALFLLV 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 70 TCWLLPLMILASQnhisPEPTHRQRLYIALLTSLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQnERLNAGTY 149
Cdd:PRK08375 86 TSILAIAALLYAI----GYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR-RALAAARK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 150 FLFYTLAGSLPLLVALLLLQQSSGTLSMLMLLNAettLASSWSHKIWWVGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGS 229
Cdd:PRK08375 161 YLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGA---LAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVT 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 230 MILAAVLLKLGGYGMMRIMVTL----GPLSQQLVYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQ 305
Cdd:PRK08375 238 ALLSGLVTKVAVYALIRIYFTVfggdFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 306 TPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITA 385
Cdd:PRK08375 318 TPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVG 397
|
410 420
....*....|....*....|...
gi 2301263218 386 LFN-WSPWTVALTGVGTLITASY 407
Cdd:PRK08375 398 AVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
201-450 |
1.02e-27 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 115.41 E-value: 1.02e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRI-MVTLGPLSQQLVYP-FMILALWGIIMTGLMCL 278
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYyILIDAAIGSDFPGRlLLIFGLLSVLVAAFFLL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 279 RQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAV 358
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGW 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 359 WWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGVGTLITASYSLymFLMSQRgqtpsHTINLTPSHTREHLLI 438
Cdd:PRK06458 381 GLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAAL--VRRVAG-----MVFGEPPEAVNRGDLG 453
|
250
....*....|..
gi 2301263218 439 ALHLIPMMLLIA 450
Cdd:PRK06458 454 WLTTSPMFVHLV 465
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-412 |
1.61e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 111.99 E-value: 1.61e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 57 LATDPLSTPLLVLTCWLLPLMILASQNHISPEPTHRqrLYIALLTSLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITR 136
Cdd:PRK12667 78 YEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPE--WYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAY 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 137 WGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSSGTLSMLML----------LNAETTLASSWSHKIWWVGCLIAFLV 206
Cdd:PRK12667 156 YRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLsakirglsfpLTGGLAGNPPLALGVALALALWAFTI 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 207 KMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVT-------LGPLSQQLVYPFMILALWGIIMTGLMCLR 279
Cdd:PRK12667 236 KAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTifgispsLIDFRAALSPILIILGAVSAIIGALMMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 280 QTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAVW 359
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFA 395
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 2301263218 360 WFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALtgVGTLITASYSLYMF 412
Cdd:PRK12667 396 FLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPAL--VLLIASAISLVGYF 446
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
201-432 |
4.95e-18 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 86.35 E-value: 4.95e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTL--GPLSQQLVYPFMILALWGIIMTGLMCL 278
Cdd:PRK08676 213 FIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIFSIAVAAFSML 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 279 RQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAV 358
Cdd:PRK08676 293 SQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAW 372
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2301263218 359 WWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGVGTLITASySLYMFLMSQRGQTPSHTINLTPSHT 432
Cdd:PRK08676 373 GVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAAS-SFAIFLLKAFTRVSEGNADRPVFRT 445
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
105-410 |
9.06e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 82.71 E-value: 9.06e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 105 TFLI------MAFGATEIIMFYVMFEATLIPTLIIITRwGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSSGTLSML 178
Cdd:PRK12665 116 TYLIlvagvsNAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 179 MLLNAETTLASSWSHKIWWVgCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTLGPlSQQL 258
Cdd:PRK12665 195 DLAVRLDELPSGTRTALFAV-LLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGL 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 259 VYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERT 338
Cdd:PRK12665 273 DTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2301263218 339 HSRTMVLARGMQMIFPLMAVWWFLANLaNLA-MPPLPNLMGELMIITA-LFNWSPWTVALTGvGTLITASYSLY 410
Cdd:PRK12665 353 GSSSLRRLGGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKVALLEAgAEDGTWLAWALVA-GGVVTSLLTLY 424
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
110-440 |
2.20e-14 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 74.99 E-value: 2.20e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 110 AFGATEIIMFYVMFEATLIPTLIIITrWGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSSGTLSMLMLLNAETTLAS 189
Cdd:PRK12663 124 SFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGD 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 190 SWSHKIWWVGCLIAFLVKMPLYGVHlWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTLGPLSQQLVYPFMILALWG 269
Cdd:PRK12663 203 TATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAI 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 270 IIMTGLM-CLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMVLARG 348
Cdd:PRK12663 282 TMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGG 361
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 349 MQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGVGTLITASYSLY-MFLMSQRGQTPSHTINL 427
Cdd:PRK12663 362 LYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFrIFFLAYWGDKDGEEVNF 441
|
330
....*....|...
gi 2301263218 428 TPSHTREHLLIAL 440
Cdd:PRK12663 442 KPIPLYRKLPLSI 454
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
199-402 |
2.33e-14 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 75.01 E-value: 2.33e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 199 GCLIAFLVKMPLYGVHLWLPKAhVEAPVAGSMIL-AAVLLKLGGYGMMRIMVTLGPLSQQLVYPFMILALWGIIMTGLMC 277
Cdd:PRK06525 212 GILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMY 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 278 LRQTDLKSLIAYSSVGHMGLVAGGI---LVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMVLARGMQMIFP 354
Cdd:PRK06525 291 LPQQDMKRLLAYSTITQLGYMFFGLslaILGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLP 370
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2301263218 355 LMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGVGTL 402
Cdd:PRK06525 371 LVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
201-386 |
2.46e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 75.03 E-value: 2.46e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 201 LIAF-LVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGM---MRIMVTLGPLSQQLVY-----PFMILALWG-- 269
Cdd:PRK08668 202 LLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFllvLYVLPGTKLFSEFGTYrgvplFNYILAWLGni 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 270 -IIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMVLARG 348
Cdd:PRK08668 282 sIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGG 361
|
170 180 190
....*....|....*....|....*....|....*...
gi 2301263218 349 MQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITAL 386
Cdd:PRK08668 362 LIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL 399
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
2-460 |
3.04e-14 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 74.38 E-value: 3.04e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 2 LKVLIPTIMLFPTIC-------FVPPKW-LWTTTITQSLFIALISLSWLKWTLDIGWAASNTYLAtDPLSTPLLVLTCWL 73
Cdd:COG1007 4 LLALLPEIILLLGALvlllldlFLPRRSrRLLAGLALLGLLLALALLLLALGGGTGTAFGGMFVV-DGFALFFKLLILLA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 74 LPLMILASQNHISPEPTHRQRLYIALLTSLQTFLIMAfGATEIIMFYVMFEATLIPTLIIITRWGNQNERLNAGT-YFLF 152
Cdd:COG1007 83 ALLVLLLSRDYLERRGLLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 153 ---------------YTLAGSLPLLVALLLLQQSSGTLSMLMLlnaettlasswshkiwwvGC---LIAFLVKMPLYGVH 214
Cdd:COG1007 162 galssgfllygisllYGATGSLNLAGIAAALAAGGANSPLLLL------------------GLvlvLAGLAFKLSAVPFH 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 215 LWLPKAHVEAPVAGSMILAAVLlKLGGYGM-MRIMVT-LGPLSQQLVYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSV 292
Cdd:COG1007 224 MWTPDVYEGAPTPVTAFLATAP-KIAAFAAlLRLLVEaFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSI 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 293 GHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALF-CLANTSYERTHSRTMVLARGMQMIFPLMAVwWFLANLANLA-M 370
Cdd:COG1007 303 AHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLAL-AMTIFLLSLAgI 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 371 PPLPNLMGELMIITALFNWSPWTVALTGV-GTLITASYSL----YMFLmsqRGQTPSHTINLTPSHTrehLLIALHLIPM 445
Cdd:COG1007 382 PPTAGFFGKFYVFSAAVEAGLYWLAVIAVlNSVISAYYYLrvvkAMYF---DEPEEEAPISAPPGLR---VALVIAALLV 455
|
490
....*....|....*
gi 2301263218 446 MLLIAKPELMWGWCY 460
Cdd:COG1007 456 LLLGIFPGPLLDLAA 470
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
94-410 |
3.51e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 74.22 E-value: 3.51e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 94 RLYIALLTSLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITrWGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSSG 173
Cdd:PRK07234 94 RFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANG 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 174 TLSMLMLLNAETTLASswshkiwwvgcLIA--FLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTL 251
Cdd:PRK07234 173 TFAFSGLATADPEAFA-----------LIAlgLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDV 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 252 GPLSQQLVYPFMILALWGIIMTglmcLRQTDLKSLIAYSSVGHMGLVAGGILVqtpwgfsgAIILMVAHGLTSSALFCLA 331
Cdd:PRK07234 242 PGLDLIVRIFGVGTALLGVLFA----LLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLCA 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 332 NTSYERTHS--RTMVLARGmqmifplmaVWWFLAnLANLAMPPLPNLMG---ELMIITALFNWSPWTVALTGVGTLITAS 406
Cdd:PRK07234 310 GALPSRNFTelISQMLGIG---------KWIPLT-MASFSIAGFPLLAGfvsKVLTLKNLLPWQAIALNLAAVGTAASFW 379
|
....
gi 2301263218 407 YSLY 410
Cdd:PRK07234 380 KFIF 383
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
202-387 |
5.39e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 74.00 E-value: 5.39e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 202 IAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMvtLGPLSQQLVYPFMIL------ALWGIIMTgl 275
Cdd:PRK08667 213 LGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFL--MDVLSPELWWGVLILlagsisALLGVIYA-- 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 276 mcLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSG----AIILMVA-------HGLTSSALFCLANTSYERTHSRTMV 344
Cdd:PRK08667 289 --LKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGldtlALLALGGalfhslnHALFKSLLFLTAGSVVHATGTRNIE 366
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2301263218 345 LARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALF 387
Cdd:PRK08667 367 KMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
106-407 |
6.25e-14 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 73.65 E-value: 6.25e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 106 FLIMAFGATEIIM------FYVMFEATLIpTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSSGTLSMLM 179
Cdd:PRK08377 114 FLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAH 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 180 LLNAETTLaSSWSHKIWWVGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTLGPLS--QQ 257
Cdd:PRK08377 193 IAQLAGTI-DPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANgwSS 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 258 LVYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYER 337
Cdd:PRK08377 272 VLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGIT 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2301263218 338 THSRTMVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFNWS-PWTVALTGVGTLITASY 407
Cdd:PRK08377 352 LGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGyTWPVALVLGASVVEAVY 422
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
94-449 |
1.11e-13 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 73.25 E-value: 1.11e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 94 RLYIALLTSLQTFLIMAFGATEIIMfYVMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSSG 173
Cdd:PRK12646 111 RFYFYLTLFMFSMIGIVLSDNTILM-YVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTG 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 174 TLSMLMLLNAETTLASSWSHKIWWVGCLIAFLVKMPLYGVHLWLPKAhVEAPVAGSMIL-AAVLLKLGGYGMMRIMVTLG 252
Cdd:PRK12646 190 TNNITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 253 pLSQQLVYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVA-----GGILVQTPWG----------FSGAIILM 317
Cdd:PRK12646 269 -LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMamvgiGGGYAQHQQDaiasiyvfvlFAALFHLM 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 318 vAHGLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSP------ 391
Cdd:PRK12646 348 -NHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQlsqfsl 426
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2301263218 392 -WTVALTGVG---TLITASYSLYMflMSQRGQTPSHTINLTPSHTREHLLIALHLIPMMLLI 449
Cdd:PRK12646 427 iSMIIIVFIGviaSIFTFTYALYM--VKEVFWGKYDSKVFTKKNIHEPWLFSLPSLILMVLV 486
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-407 |
3.82e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 68.20 E-value: 3.82e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 119 FYVMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSSGTLSMLMLLnAETTLASSWSHKIWWV 198
Cdd:PRK08376 146 FFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLA-VKMSENPTVVAKIALA 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 199 GCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILaaVLLKLGG-YGMMRIMVTLGPLSQQLV---YPFMILALWGIIMTG 274
Cdd:PRK08376 225 LFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAINLAtvgWVIIILGCLTMFVGV 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 275 LMCLRQTDLKSLIAYSSVGHMG---------LVAGGILVQTPWGF---SGAIILMVAHGLTSSALFCLANTSYERTHSRT 342
Cdd:PRK08376 303 AMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEialAGGIYHIVNHALYKALLFLTAGAVIYETGTRN 382
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2301263218 343 MVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGVGT-LITASY 407
Cdd:PRK08376 383 LNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSvLTLASF 448
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-430 |
5.05e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 67.53 E-value: 5.05e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTLGPLS--QQLVYPFMIL---ALWGIIMTGL 275
Cdd:PRK06589 217 FIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSylQRIFAEFNWLifiPIVSIFYSSL 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 276 MCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMVLARGMQMIFPL 355
Cdd:PRK06589 297 KALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPL 376
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2301263218 356 MAVWWFLANLANLAMPPLPNLMGELMIITALFN----WSPWTVALTGVGTLITASYSLYMFLMSQRGQTPSHTINLTPS 430
Cdd:PRK06589 377 ISFIISISSLSLIGIPIFSGFISKFLILLAASEqnqpWLSIIVMLVVIASSILSALYLLKILSSIYKPSLSENSFITKS 455
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
113-409 |
1.74e-11 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 66.60 E-value: 1.74e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 113 ATEIIMFYVMFEATLIPTLIIITRWGNQNERLNAGTyfLFYTLAGSLPLLVALLLLQQSSGTLSMLMLLNAEttlasSWS 192
Cdd:PRK12650 129 ADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQTGTTSLSGILHSD-----VWA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 193 HKIWWVGcLIAFLVKMPLYG------VHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMR---IMVTLGPLSQQLVYPFM 263
Cdd:PRK12650 202 EKPGLTT-VVAVLIAVAAFTksaqfpFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRfspVFHDVAVWNWLLIIVGM 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 264 ILAlwgiIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTM 343
Cdd:PRK12650 281 ITA----LMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDI 356
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2301263218 344 ----VLARGMQMIFPLMAVwwflANLANLAMPPLPNLMGELMIITALF-----NWSPWTVALT-GVGTLITASYSL 409
Cdd:PRK12650 357 rrlgSLWRRMPFTFVSVTI----AALSMAAVPPLFGFVSKEGMLTAFLeapggNAGVVLLLVGaALGAVFTFAYSA 428
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-402 |
7.62e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 64.56 E-value: 7.62e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 214 HLWLPKAhVEAPVAGSMIL-AAVLLKLGGYGMMRIMVTLG--PLSQQLVYPFMILALwgiIMTGLMCLRQTDLKSLIAYS 290
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARLNPVLGgtPLWQTILPLFGGLTM---LTGALLAVRQTDLKLILAYS 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 291 SVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAVWWFLANLANLAM 370
Cdd:PRK12647 291 TVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGL 370
|
170 180 190
....*....|....*....|....*....|..
gi 2301263218 371 PPLPNLMGELMIITALFNWSPWTVALTGVGTL 402
Cdd:PRK12647 371 PPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
45-387 |
2.02e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 62.66 E-value: 2.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 45 TLDIG-WAAS-NTYLATDPLSTPLLVLTCWLLPLMILASQNHISPEpthRQRLYI-ALLTSLQTFLIMAFGATEIIMFYV 121
Cdd:PRK07691 59 TLELGnWKAPfGIVFVADMFAALLVLTSSIITFLVILYSFQTIGIE---RERYYYyPSVLFMLAGVNGAFLTGDIFNLFV 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 122 MFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAgSLPLLVALLLLQQSSGTLSMLMLLNAETTLASSWSHKIWWVGCL 201
Cdd:PRK07691 136 FFEVMLMASYVLIVIGGTKIQLRESIKYVLINVVS-SAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGLITVVAIL 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 202 --IAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTLGPLSQQLVYPFM-ILALWGIIMTGLMCL 278
Cdd:PRK07691 215 flFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLIlILALLTIIFGVIGAV 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 279 RQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAV 358
Cdd:PRK07691 295 AYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGW 374
|
330 340
....*....|....*....|....*....
gi 2301263218 359 WWFLANLANLAMPPLPNLMGELMIITALF 387
Cdd:PRK07691 375 MFFIAALSLAGIPPLSGFYGKFFIVEGTF 403
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
170-388 |
2.03e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 62.92 E-value: 2.03e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 170 QSSGTLSMLMLlnAETTLASSWSHKIWWVGcLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMV 249
Cdd:PRK08042 159 QRYGTLDLRLL--DMRMQQLPLGSDIWLLG-VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSL 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 250 TLGPLSQQLVYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLV-----AG--GILVQTP----WGFSGAIILMV 318
Cdd:PRK08042 236 LGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgAGvtGIALEQPaliaLGLVGGLYHLL 315
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 319 AHGLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFN 388
Cdd:PRK08042 316 NHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
214-448 |
2.88e-10 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 62.48 E-value: 2.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 214 HLWLPKAhVEAPVAGSMIL-AAVLLKLGGYGMMRI--MVTLGPLSQQLVypfMILALWGIIMTGLMCLRQTDLKSLIAYS 290
Cdd:COG1009 231 HFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLspLFALSPVWLTVV---AIIGAITALFAALIALAQTDIKRVLAYS 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 291 SVGHMGLVAGGILVQtpwGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAVWWFLANLANLAM 370
Cdd:COG1009 307 TVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGI 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 371 PPLPNLMGELMIITALF---NWSPWTVALTGVGTLITASYSLYMFLMSQRGQTPSHTinltpsHTREHLLIALHLIPMML 447
Cdd:COG1009 384 PPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKT------PKHPHESPWLMTLPLVV 457
|
.
gi 2301263218 448 L 448
Cdd:COG1009 458 L 458
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
201-456 |
1.05e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 60.35 E-value: 1.05e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVT-LGPLSQQLVYPFMILALWGIIMTGLMCLR 279
Cdd:TIGR01770 210 LVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYiLFGFSEAWQIFLAIIAFLSMLIGNFGALA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 280 QTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALF-CLANT-SYERTHSRTMVLARGMQMIFPLMA 357
Cdd:TIGR01770 290 QKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgVLSLLrSYKDEWIEYISDFAGLFKTNPILA 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 358 VWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGV-GTLITASYSL----YMFLmsqrgQTPSHTINLTPSHT 432
Cdd:TIGR01770 370 ILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVlTSVIGAFYYLrvvkVMYF-----DKPERRIPSNPQSK 444
|
250 260
....*....|....*....|....
gi 2301263218 433 REHLLIALHLIPMMLLIAKPELMW 456
Cdd:TIGR01770 445 AQSLLLSISALFILFLGLFPSLIL 468
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
194-393 |
1.55e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 59.75 E-value: 1.55e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 194 KIWWVGCLIAFL---VKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTLgpLSQQLVYP-------FM 263
Cdd:PRK12662 206 RAIQIGVLFIMVglfIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDV--FKANFVFTtlpfnnvFM 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 264 ILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTM 343
Cdd:PRK12662 284 ILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKL 363
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 2301263218 344 VLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWT 393
Cdd:PRK12662 364 EDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWI 413
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
208-387 |
1.91e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 59.90 E-value: 1.91e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 208 MPLygvHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVT-LGPlsQQLVYPFMILALWGI--IMTGLMCLRQTDLK 284
Cdd:PRK06521 227 VPL---HVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDlLGA--PGWWWGVLVLALGAIsaVLGVLYALAEHDLK 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 285 SLIAYSSVGHMGLV-----------AGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMV----LARGM 349
Cdd:PRK06521 302 RLLAYSTIENIGIIfvglglamvfiAYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEklggLIRRM 381
|
170 180 190
....*....|....*....|....*....|....*...
gi 2301263218 350 qmifPLMAVWWFLANLANLAMPPLPNLMGELMIITALF 387
Cdd:PRK06521 382 ----PWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLL 415
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
201-328 |
2.19e-09 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 59.45 E-value: 2.19e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLlKLGGYGM-MRIMVT-LGPLSQQLVYPFMILALWGIIMTGLMCL 278
Cdd:PRK05777 211 LVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLLVVaFGGLSEDWQQVLAIIAIASMLVGNLAAL 289
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 2301263218 279 RQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALF 328
Cdd:PRK05777 290 SQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
106-345 |
4.07e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 58.40 E-value: 4.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 106 FLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSSGTLSMLMLLNaet 185
Cdd:MTH00062 83 FSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGS--- 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 186 tlASSWSHKIWWVGCLIaFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRIMVTLGPLSQQLVYPFMIL 265
Cdd:MTH00062 160 --DDSVSLIVYYVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 266 ALWGIIMTGlmcLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMVL 345
Cdd:MTH00062 237 FSVFFLITA---CSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVL 313
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-406 |
4.13e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 55.24 E-value: 4.13e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 201 LIAFLVKMPLYGVHLWLPKAHVEA--PVAGsmiLAAVLLKLGGYGMMRI-MVTLGP---LSQQLVYPFMI-LALWGIIMT 273
Cdd:PRK12666 217 LVVFLIKAAMWPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLsTLLFGPeagASAGFGQDWLLpGGLATLAFG 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 274 GLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTsYERTHSRTM-VLARGMQMI 352
Cdd:PRK12666 294 AIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADL-VERQRGAAAdRLAVTPELY 372
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2301263218 353 FP-----------------LMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGVGTLITAS 406
Cdd:PRK12666 373 DLdeeeeeevgvaipatmaLLGLLFFICALALAGLPPLSGFLGKFALLQALLNPPGAGAAWWLWALVLLSG 443
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
263-385 |
1.29e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 53.88 E-value: 1.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 263 MILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRT 342
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 2301263218 343 MVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITA 385
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQA 392
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
94-381 |
9.16e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 51.37 E-value: 9.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 94 RLYIALLTSLQTFLIMAFGATEIIMFyVMFEATLIPTLIIITRWGNQNERLNAGTYFLFYTLAGSLPLLVALLLLQQSSG 173
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 174 TLSMLMLLNAETTLASSWSHKIWWVGCLIAFL------VKMPLYgvhLWLPKAhVEAPVAGSMIL-AAVLLKLGGYGMMR 246
Cdd:PRK12649 191 TYDIATILQDSELIENIKGHPLFLITLILIFIgaaaksAQGPFY---IWLPNA-MEAPTPVSAFLhSATMVKAGVYLVAR 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 247 IMvtlgPLSQQLVYPFMILALWGII---MTGLMCLRQTDLKSLIAYSSV---GHMGLVAGGILVQTP-WGFSGAIILMVA 319
Cdd:PRK12649 267 IH----PIFSGTEAWFILVSGTGMItmvLAGFLAFRQTDIKAILAYSTIsqlAYLMTMYGYTTYHEPgLGVAAATFHLLN 342
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2301263218 320 HGLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELM 381
Cdd:PRK12649 343 HATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEM 404
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
202-399 |
3.80e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 48.87 E-value: 3.80e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 202 IAFLVKMPLYGVHLWLPKAHVEAPVagsmILAAVLLKLGGYGMMRIMVTLGPLsqqlVYPFMILALWGIIMTGLMCLRQT 281
Cdd:MTH00196 103 VALLFKLSVAPFHMWAPDVYEGAPT----KTTALLAIVPKLGIFSILVSIGLN----VNILLIGGLFSLFVGAIGALNQT 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 282 DLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSyeRTHSRTMVLARGMQMIFPLMAVWWF 361
Cdd:MTH00196 175 KIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIILAL--NVYKNLIIEFSGLSRRLPILAITLA 252
|
170 180 190
....*....|....*....|....*....|....*...
gi 2301263218 362 LANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGV 399
Cdd:MTH00196 253 LTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAV 290
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
201-410 |
1.31e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 47.61 E-value: 1.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 201 LIAFLVKMPLYGVHLWLPKAhVEAPVAGSMIL-AAVLLKLGGYGMMRimvtLGP-LSQQLVYPFMILALWGIIM--TGLM 276
Cdd:PRK12644 210 LVGALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVAR----LAPgFADVPVWRPTVLVLGLATMllGGWR 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 277 CLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMVLARGMQMIFPLM 356
Cdd:PRK12644 285 ALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVL 364
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2301263218 357 AVwwfLANLANLAMPPLPNLMG----ELMIIT-----ALFNWSPWTVALTGVGTLITASYSLY 410
Cdd:PRK12644 365 AV---VAALAAASMAGLPPLLGfvakEAALEAvlhdgALGPAGPVVLAGIVLGSILTVAYSLR 424
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
187-415 |
4.75e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 45.26 E-value: 4.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 187 LASSWSHKIWWVGCLI--AFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLlKLGGYGMMRIMVTLGplsqQLVYPFMI 264
Cdd:MTH00144 75 LIMYNLSFSWFSMSLLllGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLLSNFLDLY----WLAYLLCV 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 265 LALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILvqtpwgFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMV 344
Cdd:MTH00144 150 ISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAIL------HGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDL 223
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2301263218 345 LARGMQMIFPLMAVWWFLAnLAnlAMPPLPNLMGELMIITALFNWSPWTVALTG-VGTLITASYSLYMFLMS 415
Cdd:MTH00144 224 GSLKPSYKTGLSIISLLLS-LG--GLPPFLGFCSKLLVLISSMESSPLLLILLLlLGSLISLFFYLSVFFSS 292
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
202-383 |
2.20e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 43.47 E-value: 2.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 202 IAFLVKMPLYGVHLWLPKAHVEAPVagsmILAAVLLKLGGYGMMRIMVTLGPLSQQLVypfmILALWGIIMTGLMCLRQT 281
Cdd:MTH00199 198 ISLLFKLSAAPFHMWAPDVYEGAPT----ITTALLATVPKIGVFSILVQIGPVTNVVL----ICAVLSIIYGAIGALNQT 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 282 DLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERthSRTMVLARGMQMIFPLMAVWWF 361
Cdd:MTH00199 270 KIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMIIYVIMSICSFSIILSLKLT--KGLIVEVSGLSRKNPVIALTLA 347
|
170 180
....*....|....*....|..
gi 2301263218 362 LANLANLAMPPLPNLMGELMII 383
Cdd:MTH00199 348 LTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
245-320 |
7.52e-04 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 41.96 E-value: 7.52e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2301263218 245 MRIMVT-LGPLSQQLVYPFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAH 320
Cdd:PRK02504 261 IRLLVTaFPSFDEQWKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTEAGYASMVFYLLAY 337
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
201-447 |
7.91e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 41.30 E-value: 7.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 201 LIAFLVKMPLYGVHLWLPkaHVEAPVagSMILAAVLLKLGGYGMMRIMVTLGPLSQQLVYPFMilALWGIIMTGLMCLRQ 280
Cdd:MTH00011 95 LVSLMLKLGMAPCHFWFP--SVMSSI--SWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSM--AAMSALAGGLGGMNQ 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 281 TDLKSLIAYSSVGHMGLvaggILVQTPWGFSGAIILMVAHGLTSSALFCLANTSYERTHSRTMVLARGMQMIFplmaVWW 360
Cdd:MTH00011 169 TQLRPLLAYSSIGHMGW----MTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTS----MSL 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 361 FLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTG-VGTLITASYslYMFLMSQRGQTPSHTINLTPSHTREHLLIA 439
Cdd:MTH00011 241 FIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLiVGSLMNLFY--YLNLIFNFMYLSPTFSSLKSAPYEPKTKIL 318
|
....*...
gi 2301263218 440 LHLIPMML 447
Cdd:MTH00011 319 ISMCTLSL 326
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
204-406 |
1.24e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 41.31 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 204 FLVKMPLYGVHL--WLPKAHVEAPVAGSMILAAVLLKLGGYGMMRI-MVTLGPLSQQLVYPFMILALWGIIMTGLMCLRQ 280
Cdd:PRK06459 168 FIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMtILTQTIPIGYFGLTILAIGAFSILFGALYAYVS 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 281 TDLKSLIAYSSVGHMG--LVAGGILVQTPWGFS--------GAIILMVAHGLTSSALFCLANTSYERTHSRTMVLARGMq 350
Cdd:PRK06459 248 ENVKGLLAFSTIENNGaiLVALGLYMVTKQLITsiehfsliTVILYSFAHSVAKTGLFLSSGLQEKQSITYSKKIRNRW- 326
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 2301263218 351 mifplMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPWTVALTGVGTLITAS 406
Cdd:PRK06459 327 -----IELGLTLLASSLSGLLPNIGGVASWLLLESLFMFAYVLHNVISILFIVTGA 377
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
171-328 |
4.50e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 39.46 E-value: 4.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 171 SSGTLSMLMLLNAETTLASSWSHKIWWVGCLIAFLVKMPLYGVHLWLPKAHVEAPVAgSMILAAVLLKLGGYGMMRIMVT 250
Cdd:MTH00198 276 NEGMLGTILSATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTP-TTALIAIIPKFTVYILLTSLVI 354
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2301263218 251 LGPLsqqlvypFMILALWGIIMTGLMCLRQTDLKSLIAYSSVGHMGLVAGGILVQTPWGFSGAIILMVAHGLTSSALF 328
Cdd:MTH00198 355 TSKL-------LLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALASF 425
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
197-414 |
6.58e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 38.85 E-value: 6.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 197 WVGCLIAFLVKM---------PLygvHLWLPKAhVEAPVAGS-MILAAVLLKLGGYGMMRimvtLGPLSQQLVYPFMILA 266
Cdd:PRK07376 224 WLALLLCILVFLgpmaksaqfPL---HVWLPDA-MEGPTPISaLIHAATMVAAGVFLVAR----MYPVFEQFPAVMTVIA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 267 LWGIIMTGL---MCLRQTDLKSLIAYSSVGHMG--LVAGGIlvqtpWGFSGAIILMVAHGLTSSALFcLANTS------- 334
Cdd:PRK07376 296 WTGAITAFLgasIALTQNDIKKGLAYSTISQLGymVMAMGC-----GAYSAGLFHLMTHAYFKAMLF-LGSGSvihgmee 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2301263218 335 ---YERTHSRTMVLARGMQMIFPLMAVWWFLANLANLAMPPLPNLMGELMIITALFNWSPwtvALTGVGTLITASYSLYM 411
Cdd:PRK07376 370 vvgHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANP---ALWFVGFLTAGMTAFYM 446
|
...
gi 2301263218 412 FLM 414
Cdd:PRK07376 447 FRM 449
|
|
| |
