|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-347 |
3.41e-166 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 467.02 E-value: 3.41e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 1 MNPMVFSLIMMTMMMGTTLVMTSSHWFMIWVGFEMNMLAIIPLLTKQHNPRSTEAATKYFLTQATASMLLMMAAIMNLLY 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 81 TGHWSIMKLTNPLASIMMTMAMAMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYMATPLMDLNFLMILALL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 161 SIAIGGWGGLNQTQLRKILAYSSIAHMGWMISILTYNPAMMLLNLYIYIPMTTTTFMLLMMNSTTATTSLSHMWNKMPLI 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 241 TLFILVTMLSLGGLPPLTGFLPKWLIIQELVKNNNIFMSTLMALMALLSLYFYVRITYTTSLTMFPTTNNTKINWQFKAP 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....*..
gi 2431510044 321 KKMMFLPPMIVISTMILPMSPMMIILE 347
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSILE 347
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.01e-124 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 361.81 E-value: 1.01e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 1 MNPMVFSLIMMTMMMGTTLVMTSSHWFMIWVGFEMNMLAIIPLLTKQHNPRSTEAATKYFLTQATASMLLMMAAIMNLLY 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 81 TGHWSIMKLTNPLASIMMTMAMAMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYMATPlMDLNFLMILALL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAP-TNPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 161 SIAIGGWGGLNQTQLRKILAYSSIAHMGWMISILTYNPAMMLLNLYIYIPMTTTTFMLLMMNSTTATTSLSHMWNKMPLI 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 241 TLFILVTMLSLGGLPPLTGFLPKWLIIQELVKNNNIFMSTLMALMALLSLYFYVRITYTTSLTMFPTTNNTKINWQFKAP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*.
gi 2431510044 321 KKMMFLPPMIVISTMILPMSPMMIIL 346
Cdd:MTH00135 320 QLTLPLAISTTATLMLLPLTPAILAL 345
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
9.22e-119 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 346.52 E-value: 9.22e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 1 MNPMVFSLIMMTMMMGTTLVMTSSHWFMIWVGFEMNMLAIIPLLTKQHNPRSTEAATKYFLTQATASMLLMMAAIMNLLY 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 81 TGHWSIMKLTNPLASIMMTMAMAMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYMATPLMDLNFLMILALL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 161 SIAIGGWGGLNQTQLRKILAYSSIAHMGWMISILTYNPAMMLLNLYIYIPMTTTTFMLLMMNSTTATTSLSHMWNKMPLI 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 241 TLFILVTMLSLGGLPPLTGFLPKWLIIQELVKNNNIFMSTLMALMALLSLYFYVRITYTTSLTMFPTTNNTKINWQFKAP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*.
gi 2431510044 321 KKmMFLPPMIVISTMILPMSPMMIIL 346
Cdd:MTH00070 321 TN-NLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-344 |
7.64e-117 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 341.80 E-value: 7.64e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 1 MNPMVFSLIMMTMMMGTTLVMTSSHWFMIWVGFEMNMLAIIPLLTKQHNPRSTEAATKYFLTQATASMLLMMAAIMNLLY 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 81 TGHWSIMKLTNPLASIMMTMAMAMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYMATPLMDLNFLMILALL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 161 SIAIGGWGGLNQTQLRKILAYSSIAHMGWMISILTYNPAMMLLNLYIYIPMTTTTFMLLMMNSTTATTSLSHMWNKMPLI 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 241 TLFILVTMLSLGGLPPLTGFLPKWLIIQELVKNNNIFMSTLMALMALLSLYFYVRITYTTSLTMFPTTNNTKINWQFKaP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTK-P 319
|
330 340
....*....|....*....|....
gi 2431510044 321 KKMMFLPPMIVISTMILPMSPMMI 344
Cdd:MTH00112 320 KKNTLTATLTTLSTLLLPLSPMIL 343
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-315 |
4.58e-90 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 273.73 E-value: 4.58e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 1 MNPMVFSLIMMTMMMGTTLVMTSSHWFMIWVGFEMNMLAIIPLLTKQHNPRSTEAATKYFLTQATASMLLMMAAIMNLLY 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 81 TGHWSIMKLTNPLASIMMTMAMAMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYMATPLMDLNFLMILALL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 161 SIAIGGWGGLNQTQLRKILAYSSIAHMGWMISILTYNPAMMLLNLYIYIPMTTTTFMLLMMNSTTATTSLSHMWNKMPLI 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2431510044 241 TLFILVTMLSLGGLPPLTGFLPKWLIIQELVKNNNIFMSTLMALMALLSLYFYVRITYTTSLTMFPTTNNTKINW 315
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSW 315
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.61e-86 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 264.14 E-value: 2.61e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 1 MNPMVFSLIMMTMMMGTTLVMTSSHWFMIWVGFEMNMLAIIPLLTKQHNPRSTEAATKYFLTQATASMLLMMAAIMNLLY 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 81 TGHWSIMKLTNPLASIMMTMAMAMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYMATPLMDLNFLMILALL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 161 SIAIGGWGGLNQTQLRKILAYSSIAHMGWMISILTYNPAMMLLNLYIYIPMTTTTFMLLMMNSTTATTSLSHMWNKMPLI 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 241 TLFILVTMLSLGGLPPLTGFLPKWLIIQELVKNNNIFMSTLMALMALLSLYFYVRITYTTSLTMFPTTNNTKINWQfKAP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWR-TKS 319
|
330 340
....*....|....*....|....*.
gi 2431510044 321 KKMMFLPPMIVISTMILPMSPMMIIL 346
Cdd:MTH00200 320 NSNLLVGLLLLLSILGLPLTPQLLFL 345
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
23-346 |
1.37e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 174.24 E-value: 1.37e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 23 SSHWFMIWVGFEMNMLAIIPLLTKQHNPRSTEAATKYFLTQATASMLLMMAAIMNLLytghwsIMKLTNPLASIMMTMAM 102
Cdd:MTH00160 24 SNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML------NLMLFNNISSMLINSSL 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 103 AMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYMatpLMDLNFLMILALLSIAIGGWGGLNQTQLRKILAYS 182
Cdd:MTH00160 98 LLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSY---LINNNFIIIIIILSAIIGAIGGLNQTSLRKILAYS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 183 SIAHMGWMISILTYNPAMMLLNLYIYIPMTTTTFMLLMMNSTTATTSLSHMWNKMPLITLFILVTMLSLGGLPPLTGFLP 262
Cdd:MTH00160 175 SINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLP 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 263 KWLIIQELVKNNNIFMSTLMALMALLSLYFYVRITYTtslTMFPTTNNTKINWQFKAPKKMMFLPPMIVISTMILPMSPM 342
Cdd:MTH00160 255 KWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYS---SLMLNYNKNKWNLKKKKNKFSLILNFLSFISLFGLILSSL 331
|
....
gi 2431510044 343 MIIL 346
Cdd:MTH00160 332 LFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
23-315 |
5.15e-48 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 164.67 E-value: 5.15e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 23 SSHWFMIWVGFEMNMLAIIPLLTKQHNPRSTEAATKYFLTQATASMLLMMAAIMNLLYTGHWSIMkltnplasIMMTMAM 102
Cdd:MTH00144 23 SSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM--------SLLLLGL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 103 AMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYMATPLMDL-NFLMILALLSIAIGGWGGLNQTQLRKILAY 181
Cdd:MTH00144 95 CLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSALVGSIGGLNQTQVRALLAY 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 182 SSIAHMGWMISILTYNPAMMLLNLYIYIPMTTTTFMLLMMNSTTATTSLSHMwNKMPLITLFILVTMLSLGGLPPLTGFL 261
Cdd:MTH00144 175 SSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSL-KPSYKTGLSIISLLLSLGGLPPFLGFC 253
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 2431510044 262 PKWLIIQELVKNNNIFMSTLMALMALLSLYFYVRITYTTSLTMFPTTNNTKINW 315
Cdd:MTH00144 254 SKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKV 307
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
23-296 |
2.26e-43 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 152.63 E-value: 2.26e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 23 SSHWFMIWVGFEMNMLAIIPLLTKQHNPRSTEAATKYFLTQATASMLLMMAAIMNllytghWSIMKLTNPLASIMMTMAM 102
Cdd:MTH00011 25 SNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMM------WSFPSLLKNITALMLLVSL 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 103 AMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYMATPLMDLNFLMILALLSIAIGGWGGLNQTQLRKILAYS 182
Cdd:MTH00011 99 MLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMNQTQLRPLLAYS 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 183 SIAHMGWMISILTYNPAMMLLNLYIYIPMTTTTFMLLMMNSTTATTSLSHMWNKMPLITLFILVTMLSLGGLPPLTGFLP 262
Cdd:MTH00011 179 SIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSLGGLPPFTGFMP 258
|
250 260 270
....*....|....*....|....*....|....
gi 2431510044 263 KWLIIQELVKNNNIFMSTLMALMALLSLYFYVRI 296
Cdd:MTH00011 259 KLMAIETLTSNSMILILLVLIVGSLMNLFYYLNL 292
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
23-336 |
2.74e-39 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 141.35 E-value: 2.74e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 23 SSHWFMIWVGFEMNMLAIIPLLTKQHNPRSTEAATKYFLTQATASMLLMMAAIMNLLYTghwsimkLTNPLASIMMTMAM 102
Cdd:MTH00197 17 SSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL-------YLSLLSVVLVILGL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 103 AMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYMATPLMDLnfLMILALLSIAIGGWGGLNQTQLRKILAYS 182
Cdd:MTH00197 90 LLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMG--LLICSVLSSLIGGIGGMNQSNIRQLLAYS 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 183 SIAHMGWMISILTYNPAMMLLNLYIYIPMTTTTFMLLMMNSTTATTSLSHMWNKMPLITLFILVTMLSLGGLPPLTGFLP 262
Cdd:MTH00197 168 SIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFL 247
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2431510044 263 KWLIIQELVKNNNIFMSTLMALMALLSLYFYVRITYTTSLTMFPTTNNTKINWQFKAPKK--MMFLPPMIVISTMI 336
Cdd:MTH00197 248 KWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMKINLLYSGLFilLMMMLPLLMIFTMI 323
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-280 |
7.68e-33 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 123.58 E-value: 7.68e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 23 SSHWFMIWVGFEMNMLAIIPLLT-KQHNPRSTEAATKYFLTQATASMLLMMAAIMNLLYTGHWSIMKL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 91 NPLASIMMTMAMAMKLGLSPFHFWVPEVTQGIPLSSGLILL-TWQKLAPLSVLYMATPLMD-----LNFLMILALLSIAI 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGYGLIRRSLLYLPsspfiQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 165 GGWGGLNQTQLRKILAYSSIAHMGWMISIL----TYNPAMMLLNLYIYIPMTTTTF-----MLLMMNSTTATTSLSHMWN 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFlcagsVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 2431510044 236 KMPLITLFILVTMLSLGGLPPLTGFLPKWLIIQELVKNNNIFMST 280
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVL 285
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
23-274 |
1.18e-30 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 120.99 E-value: 1.18e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 23 SSHWFMIWVGFEMNMLAIIPL--LTKqHNPRSTEAATKYFLTQATASMLLMMAAIMNLLYTGHWSIMKLTNPLAS----- 95
Cdd:COG1007 121 ANDLLTLFLGLELLSLSLYVLvaFRR-DDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAALAAggans 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 96 -------IMMTMAMAMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLY--MATPLMDLNF-----LMILALLS 161
Cdd:COG1007 200 pllllglVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLrlLVEAFPGLAAdwqllLAVLAVLS 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 162 IAIGGWGGLNQTQLRKILAYSSIAHMGWM-ISILTYNPAM---MLLNLYIYIPMTTTTFMLLMMNSTTAT-----TSLSH 232
Cdd:COG1007 280 MTVGNLAALAQTNVKRMLAYSSIAHAGYLlLGLAAGTPLGvsaALFYLLAYLFMNLGAFAVILLLSRKGGeaeeiEDLAG 359
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2431510044 233 MWNKMPLITLFILVTMLSLGGLPPLTGFLPKWLIIQELVKNN 274
Cdd:COG1007 360 LARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAG 401
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
23-296 |
1.35e-30 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 119.36 E-value: 1.35e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 23 SSHWFMIWVGFEMNMLAIIPLLTKQHNP-RSTEAATKYFLTQATASMLLMMAAIM-------------NLLYTGHWSIMK 88
Cdd:MTH00196 12 SSNWLSVYLAIELQTLSLFILIAQNRGSgYSAEAGLKYFVLGALSSGLFLFGCALlcgttgglhlsyiNLVLNSGQSFSS 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 89 LTNPLASIMMTMAMAMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYMATPlmDLNFLMILALLSIAIGGWG 168
Cdd:MTH00196 92 VSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGL--NVNILLIGGLFSLFVGAIG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 169 GLNQTQLRKILAYSSIAHMG---WMISILTYNPAMM-LLNLYIYIPMTTTTFMLLMMNSTTAT--TSLSHMWNKMPLITL 242
Cdd:MTH00196 170 ALNQTKIKRLLAYSGIGHMGfvlWGIEIGSFESIQAsLVYLFIYIIMSICVFSIILALNVYKNliIEFSGLSRRLPILAI 249
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 2431510044 243 FILVTMLSLGGLPPLTGFLPKWLIIQELVKNNNIFMSTLMALMALLSLYFYVRI 296
Cdd:MTH00196 250 TLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
23-296 |
1.44e-28 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 115.11 E-value: 1.44e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 23 SSHWFMIWVGFEMNMLAIIPLLT-KQHNPRSTEAATKYFLTQATASMLLMMAAImnLLY--TGHWSIMK----LTNPLAS 95
Cdd:MTH00199 116 SINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCA--LLYglTGETSIQGinsiLTGDVGK 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 96 IMMTMAMAMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYMATPLMdlNFLMILALLSIAIGGWGGLNQTQL 175
Cdd:MTH00199 194 ILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVT--NVVLICAVLSIIYGAIGALNQTKI 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 176 RKILAYSSIAHMGWMISILTYNP----AMMLLNLYIYIPMTTTTF-MLLMMNSTTA-TTSLSHMWNKMPLITLFILVTML 249
Cdd:MTH00199 272 KRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFsIILSLKLTKGlIVEVSGLSRKNPVIALTLALTFL 351
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 2431510044 250 SLGGLPPLTGFLPKWLIIQELVKNNNIFMSTLMALMALLSLYFYVRI 296
Cdd:MTH00199 352 SIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
49-296 |
2.46e-26 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 108.75 E-value: 2.46e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 49 NPRSTEAATKYFLTQATASMLLMMAAIMNLLYTGHWSIMKLTNPLAS------------IMMTMAMAMKLGLSPFHFWVP 116
Cdd:PRK05777 149 RRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALADgsgnsllllfglVFLLVGLAFKLSAVPFHMWTP 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 117 EVTQGIPLSSGLILLTWQKLAP----LSVLYMATPLMDL---NFLMILALLSIAIGGWGGLNQTQLRKILAYSSIAHMGW 189
Cdd:PRK05777 229 DVYEGAPTPVTAFLATAPKIAAfavlLRLLVVAFGGLSEdwqQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGY 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 190 M---ISILTYNP-AMMLLNLYIYIPMTTTTF-MLLMMNS----TTATTSLSHMWNKMPLITLFILVTMLSLGGLPPLTGF 260
Cdd:PRK05777 309 LlvgLAAGTAEGySAVLFYLLAYLFMTLGAFgVISLLRRkggeAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGF 388
|
250 260 270
....*....|....*....|....*....|....*.
gi 2431510044 261 LPKWLIIQELVKNNNIFMSTLMALMALLSLYFYVRI 296
Cdd:PRK05777 389 WGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
23-296 |
9.11e-26 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 107.34 E-value: 9.11e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 23 SSHWFMIWVGFEMNMLAIIPLLT-KQHNPRSTEAATKYFLTQATASMLLMMAAIMNLLYTGHWSIMKLTNPLASIM---- 97
Cdd:TIGR01770 121 SNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMlnis 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 98 --------MTMAMAMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVL-------YMATPLMDLNFLMILALLSI 162
Cdd:TIGR01770 201 llllgivlILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFlrlflyiLFGFSEAWQIFLAIIAFLSM 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 163 AIGGWGGLNQTQLRKILAYSSIAHMGWMISILTYNPAM----MLLNLYIYIPMTTTTFMLLMMNSTTATTSLSHMWN--- 235
Cdd:TIGR01770 281 LIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEgikaVLFYIFIYALMSLGAFGVLSLLRSYKDEWIEYISDfag 360
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2431510044 236 ---KMPLITLFILVTMLSLGGLPPLTGFLPKWLIIQELVKNNNIFMSTLMALMALLSLYFYVRI 296
Cdd:TIGR01770 361 lfkTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRV 424
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
27-271 |
3.19e-21 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 93.67 E-value: 3.19e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 27 FMIWVGFEMNMLAIIPLLTKQHNPRSTEAATKYFLTQATASMLLMMAAIMNLLYTGHWSIMKLTN----------PLASI 96
Cdd:COG0651 130 FNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAArlaeldpgllLAAFA 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 97 MMTMAMAMKLGLSPFHFWVPEVTQGIP-----LSSGLILltwqKLAPLSVLYMATPLMD-------LNFLMILALLSIAI 164
Cdd:COG0651 210 LLLVGFGIKAALFPLHFWLPDAYPAAPspvsaLLSGLLT----KVGVYAILRVLTLLFGadpalflGTLLLVLGLLTMLV 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 165 GGWGGLNQTQLRKILAYSSIAHMGWM-ISILTYNPAMMLLNLYIYIPMTTTTFMLLM----MNSTTATTSLSHM---WNK 236
Cdd:COG0651 286 GALGALAQRDLKRLLAYSSVSQIGYIlLGLGLGTPLGLAGALFHLLNHALAKALLFLaagaIERATGTRDLDKLgglGKR 365
|
250 260 270
....*....|....*....|....*....|....*
gi 2431510044 237 MPLITLFILVTMLSLGGLPPLTGFLPKWLIIQELV 271
Cdd:COG0651 366 MPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAAL 400
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
3.50e-19 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 88.14 E-value: 3.50e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 51 RSTEAATKYFLTQATASMLLMMAaiMNLLYT---GHWSIMKLTNPL-------------ASIMMTMAMAMKLGLSPFHFW 114
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYG--FSWLYGlsgGEIELQEIVNGLintqmynspgisiALIFITVGIGFKLSLAPFHQW 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 115 VPEVTQGIPLSSGLILLTWQKLAPLSvlyMATPLMDLNF----------LMILALLSIAIGGWGGLNQTQLRKILAYSSI 184
Cdd:CHL00049 237 TPDVYEGSPTPVVAFLSVTSKVAASA---LATRIFDIPFyfssnewhllLEILAILSMILGNLIAITQTSMKRMLAYSSI 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 185 AHMGW-MISILTYNP----AMMLLNLYIYIPMTTTTFM-LLMMNSTTATTSL---SHMWNKMPLITLFILVTMLSLGGLP 255
Cdd:CHL00049 314 GQIGYvIIGIIVGDSndgyASMITYMLFYIFMNLGTFAcIVLFGLRTGTDNIrdyAGLYTKDPFLALSLALCLLSLGGIP 393
|
....*...
gi 2431510044 256 PLTGFLPK 263
Cdd:CHL00049 394 PLAGFFGK 401
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
28-263 |
1.68e-17 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 83.18 E-value: 1.68e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 28 MIWVGFEMnmLAIIP-LLT--KQHNPRSTEAATKYFLTQATASMLLMMAaiMNLLY---TGHWSIMKLTNPLAS------ 95
Cdd:PRK02504 134 MIFISLET--LSIASyLLTgyMKRDPRSNEAALKYLLIGAASSAIFLYG--SSLLYglsGGSTQLSAIALALITspslgl 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 96 ----IMMTMAMAMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLA----PLSVLYMATPLMDLNF---LMILALLSIAI 164
Cdd:PRK02504 210 alalVFVIAGIAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSFDEQWkllFTALAILSMVL 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 165 GGWGGLNQTQLRKILAYSSIAHMGW-MISILTYNP---AMMLLNLYIYIPMTTTTFMLLMMNS----TTATTSLSHMWNK 236
Cdd:PRK02504 290 GNVVALAQTSMKRMLAYSSIGQAGFvMIGLVAGTEagyASMVFYLLAYLFMNLGAFACVILFSlrtgTDQISDYAGLYQK 369
|
250 260
....*....|....*....|....*..
gi 2431510044 237 MPLITLFILVTMLSLGGLPPLTGFLPK 263
Cdd:PRK02504 370 DPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
23-267 |
1.72e-14 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 74.51 E-value: 1.72e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 23 SSHWFMIWVGFEMNMLAIIPLLTKQHNPRST---------EAATKYFLTQATASMLLMMAAIMNLLYTGH--------WS 85
Cdd:MTH00198 207 SANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNegmlgtilSA 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 86 IMKLTN------PLASIMMTMAMAMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLymATPLMDLNFLMILAL 159
Cdd:MTH00198 287 TLETTNielrqgSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILL--TSLVITSKLLLSVAI 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 160 LSIAIGGWGGLNQTQLRKILAYSSIAHMGWMISILTYNPAMMLLNLYIYIPMTTTTFM-------LLMMNSTTATTS--- 229
Cdd:MTH00198 365 ISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALasftvicTLEEFGTRTPTSrqr 444
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 2431510044 230 ---------------LSHMWNKMPLITLFILVTMLSLGGLPPLTGFLPKWLII 267
Cdd:MTH00198 445 dgsfgnynlvrrlvdLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
55-268 |
1.46e-13 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 71.12 E-value: 1.46e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 55 AATKYFLTQATASmLLMMAAIMNLLYTGHWS-----IMKLTNPLASIMMTM-----AMAMKLGLSPFHFWVPEV-----T 119
Cdd:TIGR01972 157 AAMKFFLYTLAGS-LLMLLAILGLYFLGGGTfdlleLLNLPLPFGVQTWLFlaffiAFAVKVPLFPLHTWLPDAhveapT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 120 QGIPLSSGLILltwqKLAPLSVLYMATPLMD------LNFLMILALLSIAIGGWGGLNQTQLRKILAYSSIAHMGW-MIS 192
Cdd:TIGR01972 236 AGSVILAGVLL----KMGTYGFLRFNLPLFPdaslyfAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFvLLG 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 193 ILTYNPAMMLLNLYIYIPMTTTTFMLLMM----NSTTATTSLSHM---WNKMPLITLFILVTMLSLGGLPPLTGFLPKWL 265
Cdd:TIGR01972 312 IFSFNELGISGAVFQMISHGLITAALFLLvgvlYERAHTRDIAKYgglANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
...
gi 2431510044 266 IIQ 268
Cdd:TIGR01972 392 ILL 394
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
55-267 |
1.75e-12 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 68.18 E-value: 1.75e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 55 AATKYFLTQATASMLLMMAAIMNLLYTGHWS-----IMKLTNPLAS-----IMMTMAMAMKLGLSPFHFWVPEV-----T 119
Cdd:COG1008 162 AAIKFFLYTLAGSLLMLVAILALYFLAGALTfdiaeLAAAPLPLTAqlllfLAFFIAFAVKVPMFPFHTWLPDAhveapT 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 120 QGIPLSSGLILltwqKLAPLSVLYMATPLM------DLNFLMILALLSIAIGGWGGLNQTQLRKILAYSSIAHMGWM-IS 192
Cdd:COG1008 242 AGSVLLAGVLL----KMGGYGLLRFALPLFpeasayFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVlLG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 193 ILTYNPA------MMLLNLYIyipMTTTTFMLL-MMNSTTATTSLSHM---WNKMPLITLFILVTMLSLGGLPPLTGFLP 262
Cdd:COG1008 318 IFALNPLglqgavLQMVSHGL---ITAALFLLVgVLYDRTHTRDIADLgglAKRMPVLAALFLLAALASLGLPGTSGFVG 394
|
....*
gi 2431510044 263 KWLII 267
Cdd:COG1008 395 EFLVL 399
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-271 |
1.91e-12 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 68.26 E-value: 1.91e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 48 HNPRSTEAATKYFLTQATASMLLMMAAIMNLLYTGHWSIMKL----TNPLASIMMTMAMAM-------KLGLSPFHFWVP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaaPTILSSPLLTLILLLlllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 117 E-----------------VTQGIPLssglilltwqkLAPLSVLYMATPLMdLNFLMILALLSIAIGGWGGLNQTQLRKIL 179
Cdd:COG1009 236 DamegptpvsallhaatmVKAGVYL-----------LARLSPLFALSPVW-LTVVAIIGAITALFAALIALAQTDIKRVL 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 180 AYSSIAHMGWMISIL---TYNPAMMLLnlyiyipMTTTTFM-LLMMNS-----TTATTSLSHM---WNKMPLITLFILVT 247
Cdd:COG1009 304 AYSTVSQLGYMFLALgvgAYVAALFHL-------LTHAFFKaLLFLGAgsvihATGTRDIRKMgglRKKMPITAITFLIG 376
|
250 260
....*....|....*....|....
gi 2431510044 248 MLSLGGLPPLTGFLPKWLIIQELV 271
Cdd:COG1009 377 ALSLAGIPPFAGFFSKEAILEAAL 400
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
27-271 |
6.20e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 66.44 E-value: 6.20e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 27 FMIWVGFEMNMLAIIPLLTKQHNPRSTEAATKYFLTQATASMLLMMAAIMNLLYTGHWSIMKLTNPLAS--------IMM 98
Cdd:PRK08375 129 FNLFVFLEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAEnptvvtafGFV 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 99 TMAMAMKLGLSPFHFWVPEV-TQGIPLSSGLILLTWQKLAPLSVL---------YMATPLMDLNFLMILALLSIAIGGWG 168
Cdd:PRK08375 209 LLALALKAAVFPLHTWLPRAyPAAPPVVTALLSGLVTKVAVYALIriyftvfggDFRFALGLGWLLAVLALLSMLVGSLA 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 169 GLNQTQLRKILAYSSIAHMGWMISILTYNPAMMLLNLYIYIP----MTTTTFMLL-MMNSTTATTSLSHM---WNKMPLI 240
Cdd:PRK08375 289 ALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLhhalMKGALFLAAgAIEVTYGTRRLSELsglGRRMPLT 368
|
250 260 270
....*....|....*....|....*....|.
gi 2431510044 241 TLFILVTMLSLGGLPPLTGFLPKWLIIQELV 271
Cdd:PRK08375 369 AAAFAVASLSLIGVPPTSGFVSKWYLVVGAV 399
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
27-340 |
3.03e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 61.27 E-value: 3.03e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 27 FMIWVGFEMNMLAIIPLLTKQHN-PRSTEAATKYFLTQATASMLLMMAAIM-----NLLYTGHWSIMKLTNP-----LAS 95
Cdd:PRK08376 144 FNFFVFLEIMSIASYALVAFRNDtWEAIEAGIKYMFVGSLASSMVLLGIALlygqyGTLNMAYLAVKMSENPtvvakIAL 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 96 IMMTMAMAMKLGLSPFHFWVPEVTQGIPLSSGLILLTwQKLAPLSVLY-----MATPLMDLNFL----MILALLSIAIGG 166
Cdd:PRK08376 224 ALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAMLLV-IKQAGLYALArvlfsIYGPAINLATVgwviIILGCLTMFVGV 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 167 WGGLNQTQLRKILAYSSIAHMGWM-----ISILTYNPAMM-----------LLNLYIYIPMTTTTFM----LLMMNSTTA 226
Cdd:PRK08376 303 AMAVVQKDVKRLLAYHSVSQIGYMllglgVGLAALGDPAMasygeialaggIYHIVNHALYKALLFLtagaVIYETGTRN 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 227 TTSLSHMWNKMPLITLFILVTMLSLGGLPPLTGFLPKWLIIqELVKNNNIFMSTLMALMALLSLYFYVRITYttslTMFP 306
Cdd:PRK08376 383 LNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIY-ESSALFNPILGVIAMIGSVLTLASFVKVFH----TAFF 457
|
330 340 350
....*....|....*....|....*....|....
gi 2431510044 307 TTNNTKINWQFKAPKKMMFlpPMIVISTMILPMS 340
Cdd:PRK08376 458 GPPSEKVMNVKEPPKPMLV--PMLILAIAIIGMG 489
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-341 |
8.71e-10 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 53.80 E-value: 8.71e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2431510044 291 YFYVRITYTTSLTMFPTTNNTKINWQFKAPKKMMFLPPMIVISTMILPMSP 341
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLPTLTTLSILLLPLTP 51
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
152-346 |
1.94e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 58.59 E-value: 1.94e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 152 NFLMILALLSIAIGGWGGLNQTQLRKILAYSSIAHMGWMISILTYNPAMMLLNLYIYIPMTTTTFMLLMMNS-------- 223
Cdd:PRK12662 280 NVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSgsisyhfg 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 224 TTATTSLSHMWNKMPLITLFILVTMLSLGGLPPLTGFLPKWLIIQELVKNN---NIFMSTLMALMALLSLYFYVRITYTT 300
Cdd:PRK12662 360 TTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNawiGLVVLLVGSGLSVIYVWKIVEALYFE 439
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 2431510044 301 SLTMFPTTNNTkinwQFKAPKKMMFLPPMIVISTMILPMSPMMIIL 346
Cdd:PRK12662 440 SRMVESKANDK----AFKTPNAMVLCIWIMAILSIIVGIYPIPLTL 481
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
27-268 |
2.14e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 58.44 E-value: 2.14e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 27 FMIWVGFEMNMLAIIPLLTKQHNPRSTEAATKYFLTQATASMLLMMAAIMNLLYTGHWSIMKLTNPLASI---------- 96
Cdd:PRK12665 134 FNLYVGFEILLVASYVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELpsgtrtalfa 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 97 MMTMAMAMKLGLSPFHFWVPEvtqGIPLSSGLI------LLTwqKLAPLSVLYMATPL-----MDlNFLMILALLSIAIG 165
Cdd:PRK12665 214 VLLVAFGIKAAVFPLSFWLPD---SYPTAPAPVtavfagLLT--KVGVYAIIRTHTLLfpgggLD-TLLMVVALLTMVVG 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 166 GWGGLNQTQLRKILAYSSIAHMGWMISILTYNPAMMLLNLYIY----IPMTTTTFMLL-MMNSTTATTSLSHMWN---KM 237
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYvahhITVQTTLFLVVgLIERQAGSSSLRRLGGlakAS 367
|
250 260 270
....*....|....*....|....*....|.
gi 2431510044 238 PLITLFILVTMLSLGGLPPLTGFLPKWLIIQ 268
Cdd:PRK12665 368 PLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
38-274 |
1.17e-08 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 56.54 E-value: 1.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 38 LAIIPLLTKqhnpRSTEAATKYFLTQATASMLLMMAAIMNLLYTGHWSIMKLTNPL-----------ASIMMTMAMAMKL 106
Cdd:PRK08668 135 FMMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLindtstgfaliVFLFLLAFGVAKA 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 107 GLSPFHFWVPEVTQGIP------LSSGLI------------LLTWQKLAPLSVLYMATPLmdLNFLMI-LALLSIAIGGW 167
Cdd:PRK08668 211 GIFPLHVWAPDAYSEAPqsfsavLSGQLSklgaygfllvlyVLPGTKLFSEFGTYRGVPL--FNYILAwLGNISIIVGTL 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 168 GGLNQTQLRKILAYSSIAHMGW-MISILTYNPAMMLLNLYIYIPMTTTTFMLLMMNST----TATTSLSHMWN---KMPL 239
Cdd:PRK08668 289 MAILQEDIKKLIAYSSVANGGYiLVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAviyrTGTTKISEMGGlieKMPF 368
|
250 260 270
....*....|....*....|....*....|....*
gi 2431510044 240 ITLFILVTMLSLGGLPPLTGFLPKWLIIQELVKNN 274
Cdd:PRK08668 369 TFAMYLVAIISLAGIPPMSGFASKWLIFEALISKG 403
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
23-347 |
1.75e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 55.59 E-value: 1.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 23 SSHWFMIWVGFEMNMLAIIPLLTKQHNPRSTEAATKYFLTQATASMLLMMAAIMNLLYTGH------WSIMKLTNPLASI 96
Cdd:PRK06589 135 SSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGnldfvsGGLFSKNQSIILL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 97 MMTMAMAMKLGLSPFHFWVPE-----------VTQGIPLSSGLILLTWQKLAPLSVLYMATPLMDLNFLMILALLSIAIG 165
Cdd:PRK06589 215 LMFIYGIAKTAIFPVHSWLPAamvahypvsalLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLIFIPIVSIFYS 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 166 GWGGLNQTQLRKILAYSSIAHMGWMI---SILTyNPAMMLLNLYIYIPMTTTTFMLLMMNSTTATT------SLSHMWNK 236
Cdd:PRK06589 295 SLKALKTDNIKKILAYSTISQLSLALlsaFILT-PKALGAAILHLVSHSFAKICLFYSMGSIYSLKkedqvdKLHGTSKS 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 237 MPLITLFILVTMLSLGGLPPLTGFLPKWLIIQELVKNNN----IFMSTLMALMALLSLYFYVRITYTTSLTMFPTTNNTK 312
Cdd:PRK06589 374 FPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQpwlsIIVMLVVIASSILSALYLLKILSSIYKPSLSENSFIT 453
|
330 340 350
....*....|....*....|....*....|....*
gi 2431510044 313 inwqfKAPKKMMFLPPMIVISTMILPMSPMMIILE 347
Cdd:PRK06589 454 -----KSLPYLMQISVITCCCALTLFYFIQILIRE 483
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-299 |
8.25e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 53.82 E-value: 8.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 48 HNPRSTEAATKYFLTQATASMLLMMA-------------AIMNLLYTGHWSIMKLT---NPLASIMMTMAMAM-----KL 106
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLAlaflyatfgtlnmADLSAKIRGLSFPLTGGlagNPPLALGVALALALwaftiKA 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 107 GLSPFHFWVPEVTQGIP-----LSSGLILLTwQKLAPLSVLYMA-------TPLMD--LNFLMILALLSIAIGGWGGLNQ 172
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPspvsaMLSGLVVNV-GAYAIIRFLYTIfgispslIDFRAalSPILIILGAVSAIIGALMMVVQ 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 173 TQLRKILAYSSIAHMGWMISILTYNPAMMLLNLYIYIPMTTTTFMLLMMNS--------TTATTSLSHMWNKMPLITLFI 244
Cdd:PRK12667 317 KDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASgvfihaagTRDIDELAGLGRKMPIASFAF 396
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 2431510044 245 LVTMLSLGGLPPLTGFLPKWLIIQELVKNNNIFMSTLMALMALLSLYFYVRITYT 299
Cdd:PRK12667 397 LIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYS 451
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-268 |
4.66e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 51.10 E-value: 4.66e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 103 AMKLGLSPFHFWVPEVTQGIPLS-SGLI--LLT----WQKLAPLSVLYMATPLMDLNFLMILALLSIAIGGWGGLNQTQL 175
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAPPIAiAALFgaLLTkvgvYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 176 RKILAYSSIAHMGWMI-SILTYNPAMMLLNLYIYIP---MTTTTFMLL-MMNSTTATTSLSHMWNKM---PLITLFILVT 247
Cdd:PRK07691 300 KKIIIYNIMIAVGVILvGVAMMTESGMIGAIYYLIHdmiVKAALFLLIgIMIKITGTTDLKKMGGLIkryPVLGWMFFIA 379
|
170 180
....*....|....*....|.
gi 2431510044 248 MLSLGGLPPLTGFLPKWLIIQ 268
Cdd:PRK07691 380 ALSLAGIPPLSGFYGKFFIVE 400
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
110-263 |
6.15e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 51.20 E-value: 6.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 110 PFHFWVPEVTQGI-PLSSGLILLTWQKlAPLSVLYMATPLMDLN-----FLMILALLSIAIGGWGGLNQTQLRKILAYSS 183
Cdd:PRK12650 226 PFHFWLPEAMAAItPVSAFLHAAAVVK-AGIYLLLRFSPVFHDVavwnwLLIIVGMITALMGAVFAVQKTDLKKLTAYST 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 184 IAHMGWMISIL----TYNPAMMLLNLYIYIPMTTTTFMLLMM----NSTTATTSLSHMWNKMPLITLFILVTMLSLGGLP 255
Cdd:PRK12650 305 VSQLGWIVATIgvgtPFALTAAVVHTLAHALFKSSLFMLIGVvdhqAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVP 384
|
....*...
gi 2431510044 256 PLTGFLPK 263
Cdd:PRK12650 385 PLFGFVSK 392
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
100-298 |
9.16e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 50.31 E-value: 9.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 100 MAMAMKLGLSPFHFWVPEVTQGIPLSSGLILL-TWQKLAPLSVLYMATPLMDLNF------LMILALLSIAIGGWGGLNQ 172
Cdd:MTH00226 238 LAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAgILLKLGGYGLVRLSWPILPLGAqnlapaVIAMGIVGIVYGSFATCRQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 173 TQLRKILAYSSIAHMGWM-ISILTYNPAMMLLNLYIYIP---MTTTTFMLLMMNSTTATTSLSHMWN----KMPLITLFI 244
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVsITLVTHDIIGLTGSIFIMLAhgiVSSLLFILVTILYDRHHTRLIKYYRglsiTMPIWGTIM 397
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 2431510044 245 LVTMLSLGGLPPLTGFLPKWLIIQELVKNNNI---FMSTLMALMALLSLYFYVRITY 298
Cdd:MTH00226 398 IVTSLANVAVPPSGNFIGEYLSILSSFNWNPIigvFVCSGVILSAVYSFYFANRVTF 454
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
62-263 |
1.20e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 50.31 E-value: 1.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 62 TQA----TASMLLMMAAIMNL-LYTGHWSIMKL-TNPLASIMMTMAMAM-------KLGLSPFHFWVPEVTQG-IPLSSG 127
Cdd:PRK12644 160 LQAllvtTAGGLAMLVGIIILgQAAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAApTPVSAY 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 128 LILLTWQKLAPLSVLYMATPLMDLNF----LMILALLSIAIGGWGGLNQTQLRKILAYSSIAHMGWMISILTY-NPAMML 202
Cdd:PRK12644 240 LHAAAMVKAGIYLVARLAPGFADVPVwrptVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIgTRDAAL 319
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2431510044 203 LNLyiyiPMTT-------TTFMLL-MMNSTTATTS---LSHMWNKMPLITLFILVTMLSLGGLPPLTGFLPK 263
Cdd:PRK12644 320 AGL----AMLLahalfkaALFLVVgIIDHSTGTRDirkLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
27-268 |
2.82e-06 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 48.79 E-value: 2.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 27 FMIWVGFEMNMLAIIPLLTKQHNPRSTEAATKYFLTQATASMLLMMA-----AIMNLLYTGHWSI----MKLTNPLA--S 95
Cdd:PRK12663 131 FNLYVWFEVMLIASFVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGigllyGTFGTLNMAHIAMrlndMGDTATLTtiA 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 96 IMMTMAMAMKLGLSPFhFWVPEVTQGIPLSSGLI---LLTwqKLAPLSVLYMATPLMD-----LNFLM-ILALLSIAIGG 166
Cdd:PRK12663 211 LLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALfaaLLT--KVGIYALIRVFTLLFPqerelLHPLLaTMAAITMVIGA 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 167 WGGLNQTQLRKILAYSSIAHMGWMIS-ILTYNPAMM----LLNLYIYIPMTTTTFMLLMMNSTTATTSLSHM---WNKMP 238
Cdd:PRK12663 288 LGALAYKDIRRIAGYQVISSIGFILLgLALGTPAGIngaiFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLgglYRKEP 367
|
250 260 270
....*....|....*....|....*....|
gi 2431510044 239 LITLFILVTMLSLGGLPPLTGFLPKWLIIQ 268
Cdd:PRK12663 368 LFGALFLILIFAIGGLPPFSGFWGKVLLVQ 397
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
55-267 |
3.69e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 48.27 E-value: 3.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 55 AATKYFLTQATASmLLMMAAIMNLLY-----TGHWSIMKLTN-PLASIMMT-------MAMAMKLGLSPFHFWVPEV--- 118
Cdd:PRK05846 162 AATKFFLYTLLGS-LLMLVAIIYLVVvyynaTGTFDIADLLNlPLPPGVQYwlflaffIAFAVKMPMFPLHTWLPDAhvq 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 119 --TQGIPLSSGLILltwqKLAPLSVLYMATPLMD------LNFLMILALLSIAIGGWGGLNQTQLRKILAYSSIAHMGW- 189
Cdd:PRK05846 241 apTAGSVLLAGILL----KMGAYGLLRFSLPLFPdashefAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFv 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 190 MISILTYNP------------------AMMLLNLYIYIPMttttfmllmmnSTTATTSLSHMWNKMPLITLFILVTMLSL 251
Cdd:PRK05846 317 TLGIFAGNQlgiqgaifqmishglssaALFLLVGVLYDRL-----------HTRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
250
....*....|....*.
gi 2431510044 252 GGLPPLTGFLPKWLII 267
Cdd:PRK05846 386 LGLPGTSGFVGEFLIL 401
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
28-268 |
1.97e-05 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 46.08 E-value: 1.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 28 MIWVGFEMNMLAIIPLLTKQHNPRSTEAATKYFL------TQATASMLLMMAAIMNLLYTGH----WS-IMKLTNPLASI 96
Cdd:PRK06458 132 LMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIicsvgvAFALFGTILVYANAATVMGDGEmailWTeLLKHASLLDPT 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 97 MMTMAMAM-------KLGLSPFHFWVPEVTQGIP-----LSSGLILltwqKLApLSVLYMATPLMDLN--------FLMI 156
Cdd:PRK06458 212 LMKLAFVFlligfgtKVGLFPMHAWLPDAHSEAPspvsaLLSGVLL----NVA-LYAVLRYYILIDAAigsdfpgrLLLI 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 157 LALLSIAIGGWGGLNQTQLRKILAYSSIAHMGwmisiltynpaMMLLNLYIYIPMTTTTFMLLMMN-------------- 222
Cdd:PRK06458 287 FGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMG-----------LIAFALGIGGPLGIFAALLHMLNhsltksaiffasgn 355
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2431510044 223 -----STTATTSLSHMWNKMPLITLFILVTMLSLGGLPPLTGFLPKWLIIQ 268
Cdd:PRK06458 356 vlqkyGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-188 |
3.10e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 45.41 E-value: 3.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 55 AATKYFLTQATASMLLMMAAIMNLLYTGHWS--IMKLTNP--------LASIMMTMAMAMKLGLSPFHFWVPE------- 117
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTFTfdLAELGAKsyplalelLLYAGFLIAFGVKLPIFPLHTWLPDahgeasa 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2431510044 118 ----VTQGIPLSSG---LILLTWQKLaPLSVLYMAtPLmdlnfLMILALLSIAIGGWGGLNQTQLRKILAYSSIAHMG 188
Cdd:PRK12561 218 pvsmILAGVLLKMGgyaLIRFNVQML-PDAHVYFA-PA-----LAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMG 288
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
55-261 |
4.09e-05 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 45.29 E-value: 4.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 55 AATKYFLTQATASMLLMMAAIMNLLYTGHWSIMKLTNPLASIMMTMAMAMKLGLS------------PFHFWVPEVTQG- 121
Cdd:PRK07390 172 AARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAATANLDPLTATLLGLAliagptgkcaqfPLHLWLDEAMEGp 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 122 ---------IPLSSGLILLTwqKLAPLSVLymaTPLMdLNFLMILALLSiAIGG-WGGLNQTQLRKILAYSSIAHMGWM- 190
Cdd:PRK07390 252 npasilrnsVVVATGAWVLI--KLQPVLAL---SPVA-LTVLIVIGTVT-AIGAsLVAIAQIDIKRALSYSTSAYLGLVf 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 191 ISILTYNPAMMLLNLYIY-IPMTtttfmLLMMNS-----TTATTSLSHM---WNKMPLITLFILVTMLSLGGLPPLTGFL 261
Cdd:PRK07390 325 IAVGLQQPDIALLLLLTHaIAKA-----LLFMSVgsiilTTITQDLTELgglWSRMPATTLAFLVGSAGLVALLPLGGFW 399
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
49-337 |
5.44e-05 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 45.13 E-value: 5.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 49 NPRSTEAATKYFLTQATASMLLMMAAIMNLLYTGHWSIMKLTN-----------PLASIMMTMAMAMKLGLSPFHFWVPE 117
Cdd:PRK12646 156 NGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGqadhiknhglfIPMIFMFLLGAFTKSAQFPFHIWLPR 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 118 VTQG-IPLSSGLILLTWQKlAPLSVLYMATPLMDLNFLMI-----LALLSIAIGGWGGLNQTQLRKILAYSSIAHMGWMI 191
Cdd:PRK12646 236 AMAApTPVSAYLHSATMVK-AGIFLLFRFTPLLGLSNMYIyivtfVGLITMLFGSITALKQWDLKGILAYSTISQLGMIM 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 192 SI------LTYNPAMMLLNLYIYIPMTTTTFML--------LMMN--------STTATTSLSHMWNKMPLITLFILVTML 249
Cdd:PRK12646 315 AMvgigggYAQHQQDAIASIYVFVLFAALFHLMnhaifkcaLFMGvgiidheaGTRDIRILSGMRQLFPKMNLVMTIAAL 394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 250 SLGGLPPLTGFLPKWLIIQELVKNNNIFMSTLMALMALLSLYFYVRI-TYTTSLTMFPTTNNTKINWQfKAPKKMMFLPP 328
Cdd:PRK12646 395 SMAGVPFLNGFLSKEMFLDALTQTGQLSQFSLISMIIIVFIGVIASIfTFTYALYMVKEVFWGKYDSK-VFTKKNIHEPW 473
|
....*....
gi 2431510044 329 MIVISTMIL 337
Cdd:PRK12646 474 LFSLPSLIL 482
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
9.49e-05 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 44.05 E-value: 9.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 107 GLSPFHFWVPEVTQGIP------LSSGLILLTWQKLAPLSVLYMATPLMDLNFLMILALLSIAIGGWGGLNQTQLRKILA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASapaaalFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 181 YSSIAHMGWMI--------SILTYNPAMMLLNLY--IYIPMTTTTF---MLLMMNSTTATT------SLSHMWNKMPLIT 241
Cdd:PRK08042 275 YHTLENIGIILlglgagvtGIALEQPALIALGLVggLYHLLNHSLFksvLFLGAGSVWFRTghrdieKLGGIGKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|.
gi 2431510044 242 LFILVTMLSLGGLPPLTGFLPKWLIIQELVK 272
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-267 |
9.76e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 43.81 E-value: 9.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 33 FEMNMLAIIPLLTKQHNPRSTEAATKYFLTQATASMLLMMAAIMNLLYTGHWSIMKL------TNPLASIMMTMAMAMKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALsglhgsLKYLVFLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 107 GLSPFHFWVPEVTQG-IPLSSgliLLTWQKLAPLSVLYMATPLMDLN--------FLMILALLSIAIGGWGGLNQTQLRK 177
Cdd:PRK06525 222 AQLPFYSWLPDAMEApTPASA---YLHAASMVKVGVYIFARAIQSMGpiphvigyVGAVMAIVTLLYGFLMYLPQQDMKR 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 178 ILAYSSIAHMGWM---ISILTYNPAMMLLNLYIYIPMTTTTFMLLMMNS-----TTATTSL---SHMWNKMPLITLFILV 246
Cdd:PRK06525 299 LLAYSTITQLGYMffgLSLAILGSRLALEGSIAYIFNHAFAKSLFFLVAgalsySCGTRLLprlRGVLKKLPLVGVGFCV 378
|
250 260
....*....|....*....|.
gi 2431510044 247 TMLSLGGLPPLTGFLPKWLII 267
Cdd:PRK06525 379 AALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-266 |
9.88e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 44.14 E-value: 9.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 110 PFHFWVPEVTQG-IPLSSGLILLTWQK-----LAPLSVLYMATPL-MDLnfLMILALLSIAIGGWGGLNQTQLRKILAYS 182
Cdd:PRK12647 213 PFHFWLPNAMEApTPVSAYLHSATMVKagiylLARLNPVLGGTPLwQTI--LPLFGGLTMLTGALLAVRQTDLKLILAYS 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 183 SIAHMGwmisILTynpamMLLNlyIYIPMTTTTFMLLMM-------------------NSTTATTSLSHMWNKMPLITLF 243
Cdd:PRK12647 291 TVSALG----TLV-----MLLG--LGSELAIKAAVLFLVahslykgalfmvagiidheTGTRDITKLGGLRRAMPITAAA 359
|
170 180
....*....|....*....|...
gi 2431510044 244 ILVTMLSLGGLPPLTGFLPKWLI 266
Cdd:PRK12647 360 ALLAALSMAGLPPLFGFLAKELI 382
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
26-270 |
1.03e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 44.11 E-value: 1.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 26 WFMiwVGFEMNMLAIIPLLTKQHNPRSTEAATKYFLTQATASMLLMMAAiMNLLYTGH-------WSIMKLTNPLASIMM 98
Cdd:PRK06521 137 SFL--VAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLA-FGLLARESgsydfaaMRAAHLSPFWASLVF 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 99 TMAMA---MKLGLSPFHFWVPEVTQGIP-----LSSGLILltwqKLAPLSVLYMAtplMDL---------NFLMILALLS 161
Cdd:PRK06521 214 LLALFgfgAKAGLVPLHVWLPRAHPAAPshvsaLMSGVML----KVAIYGILRVV---FDLlgapgwwwgVLVLALGAIS 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 162 IAIGGWGGLNQTQLRKILAYSSIAHMGW--------MISILTYNPAMMLLNLY--IYIPMTTTTFMLLMMNST------T 225
Cdd:PRK06521 287 AVLGVLYALAEHDLKRLLAYSTIENIGIifvglglaMVFIAYGMPLLAALALTaaLYHLLNHALFKSLLFLGAgavlhaT 366
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 2431510044 226 ATTSLSHM---WNKMPLITLFILVTMLSLGGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06521 367 GTRDMEKLgglIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSL 414
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
111-333 |
1.74e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 43.14 E-value: 1.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 111 FHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYMATPLMDLNFLM-----ILALLSIAIGGWGGLNQTQLRKILAYSSIA 185
Cdd:MTH00020 229 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLAliivtIVGSLTVFFAATVGLVQNDLKKVIAYSTCS 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 186 HMGWMISIL-TYNPAMMLLNLyiyipMTTTTFMLLMMNSttaTTSLSHMWN------KM-------PLITLFILVTMLSL 251
Cdd:MTH00020 309 QLGYMVVACgLSHYSISLFHL-----MNHAFFKALLFLS---AGSVIHALSdeqdmrKMgglisflPLTYIFFLIGSLSL 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 252 GGLPPLTGFLPKWLIIqELVKNNN--IFMSTLMALMALLSLYFYVRITYttsLTMFPTTNNTKINWQFKAPKKMMFLPPM 329
Cdd:MTH00020 381 MGFPYLTGFYSKDLIL-ELAFGQYylIFAYWLGCFSALLTAFYSIRLIY---LTFLSNTNLKKAVFFHLHEGDWNLLLPL 456
|
....
gi 2431510044 330 IVIS 333
Cdd:MTH00020 457 GILA 460
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
35-270 |
1.89e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 43.18 E-value: 1.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 35 MNMLAIIPLLTKQHNPRSTEAATKYFLTQATASMLLMMAAIMNLLYTGHWSIMKLTNP-----LASIMMTMAMAMKLGLS 109
Cdd:PRK08667 143 MALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASagilsLVFLLLFLGFGIKAGII 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 110 PFHFWVPEVTQGIP-----LSSGLILLTWQKLAPLSVLYMATPLMDLNFLMILA-LLSIAIGGWGGLNQTQLRKILAYSS 183
Cdd:PRK08667 223 PFHKWLPYAHPASPsnvsaLMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAgSISALLGVIYALKEHDLKGLLAYSS 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 184 IAHMG--------WMISILTYNPAMMLLNL--YIYIPMTTTTFM-LLMMNS-----TTATTSLSHM---WNKMPLITLFI 244
Cdd:PRK08667 303 IENIGiilmgiglYVIFGVYGLDTLALLALggALFHSLNHALFKsLLFLTAgsvvhATGTRNIEKMgglVKLMPYTSALF 382
|
250 260
....*....|....*....|....*.
gi 2431510044 245 LVTMLSLGGLPPLTGFLPKWLIIQEL 270
Cdd:PRK08667 383 LVGAVSIAALPPFNGFASELLLYESF 408
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
50-268 |
2.61e-04 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 42.57 E-value: 2.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 50 PRSTEAATKYFLTQATASMLLMMAAIMNLLYTGHWSI--MKLTNPLASIMMTMAMAMKLGLSPFHFWVPE------VTQG 121
Cdd:PRK12668 139 KAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFgaIAGLGGTAAWLILIGFGVNAAFPPLHAWLPDaypeatVTGS 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 122 IPLSSglilLTwQKLApLSVLYMATPLMDlnflmILALLSIAIGGWG---GLNQTQLRKILAYSSIAHMGWMI------S 192
Cdd:PRK12668 219 VFLSA----FT-TKTA-VYALARAFPGTE-----LLIYIGAAMAVYGvffALLENDLRRLLSYHIVSQVGYMVagigigT 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 193 ILTYNPAMMllNLYIYIPMTTTTFM----LLMMNSTTATTSLSHMWNKMPLITLFILVTMLSLGGLPPLTGFLPKWLIIQ 268
Cdd:PRK12668 288 ALAINGAVA--HAFNHILYKGLLFMsagaVLYRTGTEKLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMIIS 365
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
100-188 |
4.90e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 41.96 E-value: 4.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 100 MAMAMKLGLSPFHFWVPEVTQGIPLSSGLILL-TWQKLAPLSVLYMATPLMDLN------FLMILALLSIAIGGWGGLNQ 172
Cdd:MTH00217 214 LSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAgVLLKLGGYGFIRFSWPLLPEAseyfspLIQTLSLLAIIYGSLTTCRQ 293
|
90
....*....|....*.
gi 2431510044 173 TQLRKILAYSSIAHMG 188
Cdd:MTH00217 294 VDLKRIIAYSSVAHMG 309
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-263 |
5.28e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 41.74 E-value: 5.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 47 QHNPRSTEAATKYFLTQATASMLLMMAAIMNLLYTGHWSIMKLTNP--------------LASIMMTMAMAMKLGLSPFH 112
Cdd:PRK12649 155 RHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDselienikghplflITLILIFIGAAAKSAQGPFY 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 113 FWVPEVTQG-IPLSSGLILLTWQKLAPLSVLYMATPLMDLNFLMIL----ALLSIAIGGWGGLNQTQLRKILAYSSIAHM 187
Cdd:PRK12649 235 IWLPNAMEApTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILvsgtGMITMVLAGFLAFRQTDIKAILAYSTISQL 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 188 GWMISILTYNP--------AMMLLNLYIYIPMTTTTFMLLMMNSTTATT----SLSHMWNKMPLITLFILVTMLSLGGLP 255
Cdd:PRK12649 315 AYLMTMYGYTTyhepglgvAAATFHLLNHATFKACLFLVAGIVAHEAATrdirKLGGLRKEMPITFIVASIAALAMAGIP 394
|
....*...
gi 2431510044 256 PLTGFLPK 263
Cdd:PRK12649 395 PLNGFLSK 402
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
151-332 |
6.17e-04 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 41.68 E-value: 6.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 151 LNFLMILALLSIAIGGWGGLNQTQLRKILAYSSIAHMGWMISILTYNPAM--------MLLNLYIYIPMTTTTFMLLMMN 222
Cdd:PRK08377 273 LKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdagvfhMINHAIVKALLFLAVGYVGITL 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 223 STTATTSLSHMWNKMPLITLFILVTMLSLGGLPPLTGFLPKWLIIQELVKNNNIFMSTLMALMALLSLYFYVRITYttsl 302
Cdd:PRK08377 353 GGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRLIH---- 428
|
170 180 190
....*....|....*....|....*....|
gi 2431510044 303 TMFPTTNNTKINWQFKAPKKMMFLPPMIVI 332
Cdd:PRK08377 429 TMWFKGEGERIRENAAIGIILLLLAALIVV 458
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
93-191 |
9.76e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 40.89 E-value: 9.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 93 LASIMMTMAMAMKLGLSPFHFWVPEVTQGIP-LSSGLILLTWQKLAPLSVLYMATPLMD-------LNFLMILALLSIAI 164
Cdd:PRK08676 207 ASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPsVVSALLSGTVLNIGIYGILRLSALLRQsgaaeqfSNVLIGLGIFSIAV 286
|
90 100
....*....|....*....|....*..
gi 2431510044 165 GGWGGLNQTQLRKILAYSSIAHMGWMI 191
Cdd:PRK08676 287 AAFSMLSQRNLKKLIAFSSIEHMGLML 313
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-268 |
1.23e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 40.71 E-value: 1.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 111 FHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYMATPLMD-----LNFLMILALLSIAIGGWGGLNQTQLRKILAYSSIA 185
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEkapltLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCS 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 186 HMGWMISIL----TYNPAMM-LLNLYIYIPMTTTTFMLLMMNSTTATTSLSHMW---NKMPLITLFILVTMLSLGGLPPL 257
Cdd:MTH00032 324 QLGYMVLIIgiegSHNVGLFhLVNHAFFKALLFLSAGSVIHSTTVDEQDMRKMGgliHSIPFTYTMMLIGSFSIMGLPYL 403
|
170
....*....|.
gi 2431510044 258 TGFLPKWLIIQ 268
Cdd:MTH00032 404 TGFYSKDLILE 414
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
27-268 |
2.04e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 40.01 E-value: 2.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 27 FMIWVGFEMNMLAIIPLLTKQHNPRSTEAATKYFLTQATASMLLMMAAIMNLLYTGHWSI----MKLTNPLASIMMTMAM 102
Cdd:PRK06277 123 FNLYVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNItdihNALLVNPTSPVIYGGL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 103 AMKL-------GLSPFHFWVPEVTQGIPLSSGLILLTWQK-------LAPLSVLYMATPLMDLNFLMI-LALLSIAIGGW 167
Cdd:PRK06277 203 LLLIfgllygsGLPPFHTIKSDIYAKAKPFGSALLQTFSKfvlvalmLVIFKLFGGLSYFPSAQGVLIaLSVLAMVFGVV 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 168 GGLNQTQLRKILAYSSIAHMGWM-ISILTYNPAMMLLNLYIYIPMTTTTFMLLM-------MNSTTATTSLSHMWNKMPL 239
Cdd:PRK06277 283 MALLQTDYKRLLAYHAISQGGYVaAGLALGTPLGIVAGIFHAINHVIYKSALFLgagivsyRTKTSNLRKLGGLLPVMPV 362
|
250 260
....*....|....*....|....*....
gi 2431510044 240 ITLFILVTMLSLGGLPPLTGFLPKWLIIQ 268
Cdd:PRK06277 363 VAFMVLCAKLAISGVPPFNGFQSKLMLAQ 391
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-192 |
2.27e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 39.72 E-value: 2.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 1 MNPMVFSLIMMTMMMGTTLVMTSSHWFMIWVGFEMNML-AIIPLLTKQHNPRSTEAATKYFLTQATASMLLMMAAIM--- 76
Cdd:MTH00014 87 KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIpTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLify 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 77 -----NLLYTGHWSIMKLTNPLASIMMTMAMAMKLGLSPFHFWVPEVTQGIPLSSGLILL-TWQKLAPLSVLYMATPLMD 150
Cdd:MTH00014 167 tnnslSMLMSSMEPPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAgILLKLGGYGLLRMSSLFMH 246
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2431510044 151 LNFLMILALLSIA-----IGGWGGLNQTQLRKILAYSSIAHMGWMIS 192
Cdd:MTH00014 247 INKSLSAPFSSISlvgavITSLICIRQPDLKSLIAYSSVGHMGLMTA 293
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
96-278 |
4.98e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 38.31 E-value: 4.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 96 IMMTMAMAMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYMatplMDLNFLMILALLSIAIGGWGGLNQTQL 175
Cdd:MTH00091 61 YFQFLILMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQ----FFSKNFFFLLLFGLLICFFQMFLLKSY 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 176 RKILAYSSIAHMGWMISILTYNPAMMLlnlyiYIPMTTTTFMLLMMNSttattslshmWNKMPLITLFILVTMLSLGGLP 255
Cdd:MTH00091 137 KNLLILSSTESFNWLILSFFFSFFNVF-----FLFFYYFLLMLFLIPK----------FNNVNKLNFVSWETLLVFMNLP 201
|
170 180
....*....|....*....|...
gi 2431510044 256 PLTGFLPKWLIIQELVKNNNIFM 278
Cdd:MTH00091 202 FSVTFFVKIFSLSEILKVLGFFL 224
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
49-337 |
6.29e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 38.21 E-value: 6.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 49 NPRSTEAATKYFLTQATASMLLMMAaIMNLLYTGHWSIMKLT----NPLASIMMTMAMAMKLGLSPFHFWVPEVTQGIPL 124
Cdd:MTH00207 133 NPKSLGAGMITALTNRIGDVMLLLS-IGWTLNQGHWSITNMWqtdmNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTP 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 125 SSGLILLTWQKLAPLSVLYMATPLMD-----LNFLMILALLSIAIGGWGGLNQTQLRKILAYSSIAHMGWMISILTYN-P 198
Cdd:MTH00207 212 VSALVHSSTLVTAGVFLLIRFYPFLSstywfNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGmP 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 199 AMMLLNLYIYIPMTTTTFMLL--MMNSTTATTSLSHM---WNKMPLITLFILVTMLSLGGLPPLTGFLPKWLIIQ-ELVK 272
Cdd:MTH00207 292 KLALFHLITHALFKALLFVCAgsLIHSHHHSQDLRTMgnlTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILEsSLFY 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431510044 273 NNNIFMSTLMALMALLSLYFYVRITYTT-------------------------SLTMFPTTNNTKINWQFKAPKKMMFLP 327
Cdd:MTH00207 372 PHNSLMILMIFLATALTAAYSTRFTLAVlwspnssspyhhlededkslttpmlLLTLGAITSGSALNWWLPTPQEEPILP 451
|
330
....*....|
gi 2431510044 328 PMIVISTMIL 337
Cdd:MTH00207 452 LQYKLLPLLV 461
|
|
| |
