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Conserved domains on  [gi|2489640839|ref|YP_010758175|]
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NADH dehydrogenase subunit 1 [Galegeeska rufescens]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009566)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-317 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177166  Cd Length: 318  Bit Score: 577.73  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   1 MHLINLATLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALT 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  81 IALLMWTPLPLPIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 161 TLSALISTQQHMWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTTA 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2489640839 241 LFLCPSFNPVMPEYFSINFTLKTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMLYTALPIVLACVPPQ 317
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQ 317
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-317 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 577.73  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   1 MHLINLATLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALT 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  81 IALLMWTPLPLPIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 161 TLSALISTQQHMWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTTA 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2489640839 241 LFLCPSFNPVMPEYFSINFTLKTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMLYTALPIVLACVPPQ 317
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQ 317
NADHdh pfam00146
NADH dehydrogenase;
6-304 2.33e-123

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 355.63  E-value: 2.33e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   6 LATLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALTIALLM 85
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  86 WTPLPL--PIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSGSFTLS 163
Cdd:pfam00146  82 FAVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 164 ALISTQQHMWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTTALFL 243
Cdd:pfam00146 162 EIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFL 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2489640839 244 CPSFNPVMPEYFsINFTLKTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMLY 304
Cdd:pfam00146 242 GGWLGPFPLPGL-LWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLT 301
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-299 1.11e-115

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 337.10  E-value: 1.11e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   1 MHLINLATLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALT 80
Cdd:COG1005    10 ITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFI 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  81 IALLMWTPLPL--PIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSG 158
Cdd:COG1005    90 PALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAG 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 159 SFTLSALISTQQ-HMWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNAL 237
Cdd:COG1005   170 SLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSAL 249

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2489640839 238 TTALFLCPSFNPVMPEYFS-----INFTLKTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005   250 ATTLFLGGWLGPFPILPLGglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-317 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 577.73  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   1 MHLINLATLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALT 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  81 IALLMWTPLPLPIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 161 TLSALISTQQHMWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTTA 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2489640839 241 LFLCPSFNPVMPEYFSINFTLKTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMLYTALPIVLACVPPQ 317
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQ 317
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 549.88  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   1 MHLINLATLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALT 80
Cdd:MTH00111    6 LNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALL 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  81 IALLMWTPLPLPIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSGSF 160
Cdd:MTH00111   86 LALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGY 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 161 TLSALISTQQHMWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTTA 240
Cdd:MTH00111  166 TLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTI 245

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2489640839 241 LFLCPSFNPVMPEYFSINFTLKTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMLYTALPIVLACVPPQS 318
Cdd:MTH00111  246 LFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQL 323
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-317 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 514.55  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   1 MHLINLATLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALT 80
Cdd:MTH00071    6 SLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALT 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  81 IALLMWTPLPLPIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSGSF 160
Cdd:MTH00071   86 LALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGF 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 161 TLSALISTQQHMWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTTA 240
Cdd:MTH00071  166 SLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTI 245

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2489640839 241 LFLCPSFNPVMPEYFSINFTLKTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMLYTALPIVLACVPPQ 317
Cdd:MTH00071  246 LFLGSTYNHLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPPM 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-317 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 504.91  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   1 MHLINLATLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALT 80
Cdd:MTH00134    7 THIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALT 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  81 IALLMWTPLPLPIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSGSF 160
Cdd:MTH00134   87 LALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGF 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 161 TLSALISTQQHMWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTTA 240
Cdd:MTH00134  167 TLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAI 246

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2489640839 241 LFLCPSFNPVMPEYFSINFTLKTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMLYTALPIVLACVPPQ 317
Cdd:MTH00134  247 LFLGASHIPTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPPQ 323
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 2-316 4.08e-150

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 423.55  E-value: 4.08e-150
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   2 HLINLATLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALTI 81
Cdd:MTH00218    4 SLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  82 ALLMWTPLPLPIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSGSFT 161
Cdd:MTH00218   84 ALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFS 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 162 LSALISTQQHMWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTTAL 241
Cdd:MTH00218  164 LEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVIL 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2489640839 242 FLCPSFNpvmpeyfSINFTLKTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMLYTALPIVLACVPP 316
Cdd:MTH00218  244 FLGTSLT-------TINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 3-316 7.66e-150

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 423.62  E-value: 7.66e-150
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   3 LINLATLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALTIA 82
Cdd:MTH00040    7 LINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLA 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  83 LLMWTPLPLPIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSGSFTL 162
Cdd:MTH00040   87 LLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 163 SALISTQQHMWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTTALF 242
Cdd:MTH00040  167 SSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILF 246

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2489640839 243 LCPS--FNPVMPeYFSINFTLKTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMLYTALPIVLACVPP 316
Cdd:MTH00040  247 LGGGspFNEIFP-INIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
NADHdh pfam00146
NADH dehydrogenase;
6-304 2.33e-123

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 355.63  E-value: 2.33e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   6 LATLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALTIALLM 85
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  86 WTPLPL--PIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSGSFTLS 163
Cdd:pfam00146  82 FAVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 164 ALISTQQHMWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTTALFL 243
Cdd:pfam00146 162 EIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFL 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2489640839 244 CPSFNPVMPEYFsINFTLKTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMLY 304
Cdd:pfam00146 242 GGWLGPFPLPGL-LWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLT 301
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 1-311 2.66e-122

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 352.89  E-value: 2.66e-122
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   1 MHLINLATLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALT 80
Cdd:MTH00195    3 ISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALA 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  81 IALLMWTPLPLPIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSGSF 160
Cdd:MTH00195   83 LALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSF 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 161 TLSALISTQQHMWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTTA 240
Cdd:MTH00195  163 DFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTI 242

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2489640839 241 LFLCPSFNPVmpeyfsinFTLKTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMLYTALPIVL 311
Cdd:MTH00195  243 LFLGGGGTII--------VALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-311 5.04e-122

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 352.15  E-value: 5.04e-122
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   1 MHLINLATLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALT 80
Cdd:MTH00193    3 MMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  81 IALLMWTPLPLPIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSGSF 160
Cdd:MTH00193   83 LSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSF 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 161 TLSALISTQQHMWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTTA 240
Cdd:MTH00193  163 NLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVL 242

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2489640839 241 LFLCPSFnpvmpeyFSINFTLKTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMLYTALPIVL 311
Cdd:MTH00193  243 MFLGGDL-------LSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 1-303 2.18e-118

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 343.01  E-value: 2.18e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   1 MHLINLATLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALT 80
Cdd:MTH00143    2 VSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  81 IALLMWTPLPLPIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSGSF 160
Cdd:MTH00143   82 LALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSF 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 161 TLSALISTQQHMWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTTA 240
Cdd:MTH00143  162 SFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVV 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2489640839 241 LFLcpSFNPVMPEYFSINFTLKTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCML 303
Cdd:MTH00143  242 LFF--GGSSVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVL 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-299 1.11e-115

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 337.10  E-value: 1.11e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   1 MHLINLATLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALT 80
Cdd:COG1005    10 ITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFI 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  81 IALLMWTPLPL--PIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSG 158
Cdd:COG1005    90 PALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAG 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 159 SFTLSALISTQQ-HMWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNAL 237
Cdd:COG1005   170 SLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSAL 249

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2489640839 238 TTALFLCPSFNPVMPEYFS-----INFTLKTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005   250 ATTLFLGGWLGPFPILPLGglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 1-316 1.48e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 331.31  E-value: 1.48e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   1 MHLINLATLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALT 80
Cdd:MTH00054    3 IIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLT 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  81 IALLMWTPLPL--PIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSG 158
Cdd:MTH00054   83 LAFIAWGVIPYgeGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVG 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 159 SFTLSALISTQQHMWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALT 238
Cdd:MTH00054  163 SLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFG 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 239 TALFLCPSFNPVMPEYFSIN---FTLKTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMLYTALPIVLACVP 315
Cdd:MTH00054  243 VILFLGGWLVISGPTSYFSNfvwFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALP 322


                  .
gi 2489640839 316 P 316
Cdd:MTH00054  323 P 323
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-307 3.40e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 329.69  E-value: 3.40e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   1 MHLINLATLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALT 80
Cdd:MTH00225    2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  81 IALLMWTPLPLPIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSGSF 160
Cdd:MTH00225   82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 161 TLSALISTQQHMWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTTA 240
Cdd:MTH00225  162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2489640839 241 LFLcpsfnPVMPEYFSINFTLKTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMLYTAL 307
Cdd:MTH00225  242 LFF-----GGFFVTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLII 303
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 3-316 4.29e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 330.54  E-value: 4.29e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   3 LINLATLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALTIA 82
Cdd:MTH00216    9 LIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  83 LLMWTPLPLP--IPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSGSF 160
Cdd:MTH00216   89 LIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 161 TLSALISTQ-QHMWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTT 239
Cdd:MTH00216  169 SITEIVLAQnNGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTT 248

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 240 ALFLCPSFNPVMpeYFSIN---FTLKTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMLYTALPIVLACVPP 316
Cdd:MTH00216  249 ILFLGGWLSPIK--YFKGGagwFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFNGPPP 326
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
9-299 3.05e-107

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 315.21  E-value: 3.05e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   9 LIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALTIALLMWTP 88
Cdd:PRK06076   19 ILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAV 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  89 LPL--PIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSGSFTLSALI 166
Cdd:PRK06076   99 IPFgpELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIV 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 167 STQQHMWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTTALFLcPS 246
Cdd:PRK06076  179 EAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFL-GG 257

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2489640839 247 FNPVMPEYFSIN----FTLKTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:PRK06076  258 WLPPFPLGGGIPgaiwFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLV 314
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 4-316 4.28e-96

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 287.68  E-value: 4.28e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   4 INLATLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALTIAL 83
Cdd:MTH00029   11 IKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAI 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  84 LMWTPLPLP--IPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSGSFT 161
Cdd:MTH00029   91 LAWAIVTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLN 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 162 LSALISTQQHMWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTTAL 241
Cdd:MTH00029  171 ISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIF 250

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 242 FL----------------CPSFNPVMPEYFSINFTLKTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMLYT 305
Cdd:MTH00029  251 FLggwlspldgiptppeaFSIFEQIASSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTA 330

                         330
                  ....*....|.
gi 2489640839 306 ALPIVLACVPP 316
Cdd:MTH00029  331 GILIGFNGVPP 341
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 10-307 1.18e-92

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 277.82  E-value: 1.18e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  10 IIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALTIALLMWTPL 89
Cdd:MTH00010   13 YVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLY 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  90 PLPIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSGSFTLSALIsTQ 169
Cdd:MTH00010   93 PHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKII-MS 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 170 QHMWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTTALFLcpsfnP 249
Cdd:MTH00010  172 QYSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFT-----S 246

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 250 VMPEYFSINFTL--KTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMLYTAL 307
Cdd:MTH00010  247 FIPSIFISDLMLilKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPI 306
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 9-304 1.33e-70

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 220.54  E-value: 1.33e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   9 LIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALTIALLMWTP 88
Cdd:MTH00090    5 MMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFV 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  89 LPLPIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSGSFTLSalist 168
Cdd:MTH00090   85 LPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFV----- 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 169 QQHMWLLLPMWplaMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTTALFlcpsfn 248
Cdd:MTH00090  160 SSFSLSLFVIY---LPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLF------ 230

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2489640839 249 pvmpeyFSINFTLKTLALTIcFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMLY 304
Cdd:MTH00090  231 ------FKFSFLMLFLIFSL-LIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFF 279
ndhA CHL00032
NADH dehydrogenase subunit 1
 3-311 1.98e-54

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 181.30  E-value: 1.98e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   3 LINLATLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALTIA 82
Cdd:CHL00032   30 LVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISI 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  83 LLMWTPLPLP--IPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSGSF 160
Cdd:CHL00032  110 LLSYLVIPFGyhLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSL 189

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 161 TLSALISTQQHMWLLlpMWPL------AMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMM 234
Cdd:CHL00032  190 STVDIVEAQSKYGFW--GWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVS 267

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 235 NALTTALFL------CPSFNpvMPEYFSINFTLK----------TLALTICFLWI----RASYPRFRYDQLMHLLWKNFL 294
Cdd:CHL00032  268 SLFVTVLYLggwnlsIPYIF--IPELFEINKTGGvfgttigifiTLAKTYLFLFIsittRWTLPRLRMDQLLNLGWKFLL 345

                         330
                  ....*....|....*..
gi 2489640839 295 PLTLALCMLYTALPIVL 311
Cdd:CHL00032  346 PISLGNLLLTTSFQLLS 362
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 3-298 4.98e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 165.10  E-value: 4.98e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   3 LINLATLIIpILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLYPLTSSTLLFTIAPTLALTIA 82
Cdd:MTH00058    5 VSGLEGLLI-ILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLV 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  83 LLMWTPLPLPIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITSGSFTL 162
Cdd:MTH00058   84 VFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSL 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 163 SALISTQQHMWLLLPmwPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTTALF 242
Cdd:MTH00058  164 VDFYYSGWLSVLLFP--LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLF 241

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2489640839 243 LCPSFNPVMpeyfsINFTLktlaltICFLWIRASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:MTH00058  242 FGGGFVSIM-----LLFHL------LFFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
1-304 4.88e-33

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 123.75  E-value: 4.88e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839   1 MHLINLATLIIPILLAVA-FLTLVERKILGYMQLRKGPnvvgpyGLLQPIADAVKLFTKEPLYPLTSStLLFTIAPTLAL 79
Cdd:COG0650     1 MMLILLALLQLLLALLLApLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839  80 --TIALLMWTPLPLPIPLMNMNLGILFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVSLAIILLPVIITS 157
Cdd:COG0650    74 aaMLLAALLVPVLTTGPPLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 158 GSFTLSALISTQQH---MWLLLPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMM 234
Cdd:COG0650   154 GSTSLSDIVAYQAAhgpLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2489640839 235 NALTTALFLCPSFNPVMPEYFSInFTLKTLALTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMLY 304
Cdd:COG0650   234 LSLFVNLFLPWGIALTLLLALLL-FLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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