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Conserved domains on  [gi|2554491053|ref|YP_010892782|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Galaxias oliros]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 1.35e-68

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 201.30  E-value: 1.35e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053   1 MNLIATVITITAALSAVLALVSFWLPQITPDAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2554491053  81 QLTMPSATFAWAVAVLTLLTLGLVYEWTQGGLEWAE 116
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 1.35e-68

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 201.30  E-value: 1.35e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053   1 MNLIATVITITAALSAVLALVSFWLPQITPDAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2554491053  81 QLTMPSATFAWAVAVLTLLTLGLVYEWTQGGLEWAE 116
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-113 1.51e-25

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 91.72  E-value: 1.51e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053  20 LVSFWLPQITPDAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLlpLPWGDQLT-MPSATFAWAVAVLTL 98
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFReLGWFGFVEMLIFIAI 79

                          90
                  ....*....|....*
gi 2554491053  99 LTLGLVYEWTQGGLE 113
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-114 4.96e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 83.25  E-value: 4.96e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053   4 IATVITITAALSAVLALVSFWLPQITPDAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLlpLPWGDQL- 82
Cdd:COG0838     8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFr 85

                          90       100       110
                  ....*....|....*....|....*....|..
gi 2554491053  83 TMPSATFAWAVAVLTLLTLGLVYEWTQGGLEW 114
Cdd:COG0838    86 ELGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 1.35e-68

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 201.30  E-value: 1.35e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053   1 MNLIATVITITAALSAVLALVSFWLPQITPDAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2554491053  81 QLTMPSATFAWAVAVLTLLTLGLVYEWTQGGLEWAE 116
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-116 1.49e-55

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 168.25  E-value: 1.49e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053   3 LIATVITITAALSAVLALVSFWLPQITPDAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGDQL 82
Cdd:MTH00069    1 LIMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2554491053  83 TMPSATFAWAVAVLTLLTLGLVYEWTQGGLEWAE 116
Cdd:MTH00069   81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-115 5.50e-51

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 156.58  E-value: 5.50e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053   2 NLIATVITITAALSAVLALVSFWLPQITPDAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGDQ 81
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2554491053  82 LTMPSATFAWAVAVLTLLTLGLVYEWTQGGLEWA 115
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-116 2.23e-47

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 147.78  E-value: 2.23e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053   1 MNLIATvITITAALSAVLALVSFWLPQITPDAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00106    1 MNLMLT-LLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2554491053  81 QLTMPSATFAWAVAVLTLLTLGLVYEWTQGGLEWAE 116
Cdd:MTH00106   80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 1.78e-40

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 130.10  E-value: 1.78e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053   1 MNLIATVITITAALSAVLALVSFWLPQITPDAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2554491053  81 QLTMPSATFAWAVAVLTLLTLGLVYEWTQGGLEWAE 116
Cdd:MTH00042   81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-114 1.84e-39

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 127.71  E-value: 1.84e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053   1 MNLIATVITITAALSAVLALVSFWLPQITPDAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2554491053  81 QLTMPSatFAWAVAVLTLLTLGLVYEWTQGGLEW 114
Cdd:MTH00203   81 QLSSLS--LLLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 4.78e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 96.08  E-value: 4.78e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053   1 MNLIATVITITAALSAVLALVSFWLPQITP-DAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWG 79
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYsDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 2554491053  80 DQLTMPSATFAWAVAVLTLLTLGLVYEWTQGGLEWAE 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 31-114 1.02e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 92.53  E-value: 1.02e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053  31 DAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPwgdQLTMPSATFAWAVAVLTLLTLGLV---YEW 107
Cdd:MTH00161   30 DREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMI---FIFKTSNMMSWLITSSFFILILLLglyYEW 106


                  ....*..
gi 2554491053 108 TQGGLEW 114
Cdd:MTH00161  107 NQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-113 1.51e-25

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 91.72  E-value: 1.51e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053  20 LVSFWLPQITPDAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLlpLPWGDQLT-MPSATFAWAVAVLTL 98
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFReLGWFGFVEMLIFIAI 79

                          90
                  ....*....|....*
gi 2554491053  99 LTLGLVYEWTQGGLE 113
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 5.91e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 88.51  E-value: 5.91e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053   1 MNLIATVITITAALSAVLALVSFWLP-QITPDAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWG 79
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSfRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 2554491053  80 DQLTMPSATFAWAVAVLTLLTLGLVYEWTQGGLEWAE 116
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 4-114 8.13e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 85.53  E-value: 8.13e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053   4 IATVITITAALSAVLALVSFWLPQITPDAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLlpLPWGDQLT 83
Cdd:MTH00055    8 IFILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYN 85

                          90       100       110
                  ....*....|....*....|....*....|..
gi 2554491053  84 MPSATFAWAVAVLTLLTLG-LVYEWTQGGLEW 114
Cdd:MTH00055   86 QIGLFGFWVMYLFLIILTIgLIYEWVKGGLEW 117
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-114 4.96e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 83.25  E-value: 4.96e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053   4 IATVITITAALSAVLALVSFWLPQITPDAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLlpLPWGDQL- 82
Cdd:COG0838     8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFr 85

                          90       100       110
                  ....*....|....*....|....*....|..
gi 2554491053  83 TMPSATFAWAVAVLTLLTLGLVYEWTQGGLEW 114
Cdd:COG0838    86 ELGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 8-114 1.01e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 80.11  E-value: 1.01e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053   8 ITITAALSAVLALVSFWLPQITPDAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGDQLTMPSA 87
Cdd:MTH00018    7 LIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFG 86

                          90       100
                  ....*....|....*....|....*..
gi 2554491053  88 tFAWAVAVLTLLTLGLVYEWTQGGLEW 114
Cdd:MTH00018   87 -FWTMVGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-115 1.92e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 79.52  E-value: 1.92e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053   1 MNLIATVITITAALSAVLALVSFWLP-QITPDAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWG 79
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAaRSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2554491053  80 DQLTMPSATFAWAVAVLTLLTLGLVYEWTQGGLEWA 115
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 4-115 4.15e-20

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 78.75  E-value: 4.15e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053   4 IATVITITAALSAVLALVSFWLPQITPDAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLlpLPWGDQLT 83
Cdd:PRK06602   11 FLIFLIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFR 88

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2554491053  84 MPSAT-FAWAVAVLTLLTLGLVYEWTQGGLEWA 115
Cdd:PRK06602   89 EIGWLgFVEAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 30-114 5.59e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 68.04  E-value: 5.59e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053  30 PDAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLlpLPWGDQLTMPSATFAWAV-AVLTLLTLGLVYEWT 108
Cdd:MTH00030   39 PDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLFSFWIVyTFLIVLAIGLAYEWI 116


                  ....*.
gi 2554491053 109 QGGLEW 114
Cdd:MTH00030  117 KGGLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 8-114 1.62e-09

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 51.21  E-value: 1.62e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053   8 ITITAALSAVLALVSFWLPQIT----PDAEKLSPYECGFDPLGSARLP--FSMRFFLVAILFLLFDLEIALLLPlpWG-- 79
Cdd:PRK07928    7 ILVLGALAAAFAVVSVVVASLVgpkrYNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAvs 84

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 2554491053  80 -DQLtmpsATFAWA--VAVLTLLTLGLVYEWTQGGLEW 114
Cdd:PRK07928   85 fDAL----GVFGLVemALFMLTVFVAYAYVWRRGGLEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 10-114 5.63e-09

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 49.99  E-value: 5.63e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053  10 ITAALSAVLAL-VSFWLPQITPDAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLlpLPWG---DQLTMP 85
Cdd:CHL00022   15 IISSLIPILAFlISGLLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAmsfDVLGVS 92

                          90       100
                  ....*....|....*....|....*....
gi 2554491053  86 SatFAWAVAVLTLLTLGLVYEWTQGGLEW 114
Cdd:CHL00022   93 A--FIEALIFVLILIVGLVYAWRKGALEW 119
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 7-86 6.31e-08

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 46.81  E-value: 6.31e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053   7 VITITAALSAVLALVSFWLPQITPDAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGDQLTMPS 86
Cdd:MTH00092    7 VFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVSDFSSLIS 86
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 36-77 9.29e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 41.42  E-value: 9.29e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 2554491053  36 SPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLP 77
Cdd:MTH00060   39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
3-114 2.07e-05

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 40.50  E-value: 2.07e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491053   3 LIATVITITAALSAVLAL-VSFWLPQITPDAEKLSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPlpWG-- 79
Cdd:PRK07756   10 MIVLIFLLLGILLPVVALtLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAva 87

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 2554491053  80 -DQLTMpsatFAWA--VAVLTLLTLGLVYEWTQGGLEW 114
Cdd:PRK07756   88 yDKLGL----FALIemLIFVVMLLVGLAYAWKKKVLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
34-75 6.53e-05

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 39.26  E-value: 6.53e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 2554491053  34 KLSPYECGFDPLGSARlPFSMRFFLVAILFLLFDLEIALLLP 75
Cdd:PRK08489   47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMFP 87
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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