|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 667.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 1 MLKILVPTAMLLPMAWTIPFHQLWPTALLYSLTIAFMSLTWLKTTAETGWSFLSPYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 81 SQNHMSSEPQNRQRTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTLIIITRWGNQAERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 161 LLIALLLLQNSAGTLSLLTLQYKPPMQLFTYADKLWWASCLLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 241 GYGMIRVMSLLEPLSKELSYPFLIFALWGVIMTASTCLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAH 320
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 321 GLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITALFNWSKWTLLFTGAG 400
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2554491083 401 TLITASYSLYMFLVTQQGPLPPHIIALDPTHSREHLLMALHLIPLLLLITKPELLWGWT 459
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 643.89 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 1 MLKILVPTAMLLPMAWTIPFHQLWPTALLYSLTIAFMSLTWLKTTAETgWSFLSPYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSET-MNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 81 SQNHMSSEPQNRQRTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTLIIITRWGNQAERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00068 80 SQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 161 LLIALLLLQNSAGTLSLLTLQYKPPMQLFTYADKLWWASCLLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 241 GYGMIRVMSLLEPLSKELSYPFLIFALWGVIMTASTCLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAH 320
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 321 GLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITALFNWSKWTLLFTGAG 400
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2554491083 401 TLITASYSLYMFLVTQQGPLPPHIIALDPTHSREHLLMALHLIPLLLLITKPELLWGW 458
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 641.86 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 1 MLKILVPTAMLLPMAWTIPFHQLWPTALLYSLTIAFMSLTWLKTTAETGwSFLSPYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPT-KNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 81 SQNHMSSEPQNRQRTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTLIIITRWGNQAERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00124 80 SQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 161 LLIALLLLQNSAGTLSLLTLQYKPPMQLFTYADKLWWASCLLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 241 GYGMIRVMSLLEPLSKELSYPFLIFALWGVIMTASTCLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAH 320
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 321 GLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITALFNWSKWTLLFTGAG 400
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2554491083 401 TLITASYSLYMFLVTQQGPLPPHIIALDPTHSREHLLMALHLIPLLLLITKPELLWGW 458
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 604.96 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 1 MLKILVPTAMLLPMAWTIPFHQLWPTALLYSLTIAFMSLTWLKTTAETGWSFlSPYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNF-SLLFFSDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 81 SQNHMSSEPQNRQRTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTLIIITRWGNQAERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00110 80 SQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 161 LLIALLLLQNSAGTLSLLTLQYKPPMQLFTYADKLWWASCLLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 241 GYGMIRVMSLLEPLSKELSYPFLIFALWGVIMTASTCLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAH 320
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 321 GLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITALFNWSKWTLLFTGAG 400
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2554491083 401 TLITASYSLYMFLVTQQGPLPPHIIALDPTHSREHLLMALHLIPLLLLITKPELLWGWT 459
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPT 458
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-455 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 521.81 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 3 KILVPTAMLLPMAWTIPFHQLWPTALLYSLTIAFMSLTWLKTTAETGWSFLSPYMATDPLSTPLLVLTCWLLPLMILASQ 82
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 83 NHMSSEPQNRQRTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTLIIITRWGNQAERLNAGTYFLFYTLAGSLPLL 162
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 163 IALLLLQNSAGTLSLLTLQYkppMQLFTYADKLWWASCLLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGY 242
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYF---SKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 243 GMIRVMSLLEPLSKELSYPFLIFALWGVIMTASTCLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGL 322
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 323 TSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITALFNWSKWTLLFTGAGTL 402
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2554491083 403 ITASYSLYMFLVTQQGPLPPHIIALDPTHSREHLLMALHLIPLLLLITKPELL 455
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-439 |
2.44e-164 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 471.38 E-value: 2.44e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 1 MLKILVPTAMLLPMAWTIPFHQLWPTALLYSLTIAFMSLTWLKTTAETGWSFLSPYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 81 SQNHMSSEPQNRQRTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTLIIITRWGNQAERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 161 LLIALLLLQNSAGTLSLLTLQYKPPMQLFTYADKLWWASCLLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 241 GYGMIRVMSLL-EPLSKELSYPFLIFALWGVIMTASTCLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIA 319
Cdd:MTH00044 241 GYGLIRLINLFsLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 320 HGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITALFNWSKWTLLFTGA 399
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 2554491083 400 GTLITASYSLYMFLVTQQGPLPPHIIALDPTHSREHLLMA 439
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIF 440
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
49-458 |
1.10e-120 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 358.38 E-value: 1.10e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 49 GWSFLSPYMATDPLSTPLLVLTCWLLPLMILASQNhmSSEPQNRQRTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLI 128
Cdd:MTH00150 12 SYESLSELFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 129 PTLIIITRWGNQAERLNAGTYFLFYTLAGSLPLLIALLLLQNSAGTLSLLTLQYKPpmqLFTYADKLWWASCLLAFLVKT 208
Cdd:MTH00150 90 PTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLR---KLLSSMGLWGLLVFLAFLVKL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 209 PLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEPLSKELSYPFLIFALWGVIMTASTCLRQPDLKSLIA 288
Cdd:MTH00150 167 PMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 289 YSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANL 368
Cdd:MTH00150 247 YSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINM 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 369 GLPPLPNLMGELMIITALFNWSKWTLLFTGAGTLITASYSLYMFLVTQQGPLPPHIIALDPTHSREHLLMALHLIPLLLL 448
Cdd:MTH00150 327 AAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLL 406
|
410
....*....|
gi 2554491083 449 ITKPELLWGW 458
Cdd:MTH00150 407 ILKSDLLFMW 416
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
1.93e-120 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 358.70 E-value: 1.93e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 1 MLKILVPTAMLLPMAWtIPFHQLWPTALLYSLTIAFMSLTWLkttaETGWSFLSPYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCF-LKNSWWLVQSLLFLLSFLFMLLFSL----SFYFSNISYFFGLDLLSFGLILLSFWICMLMILS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 81 SQNHMSSepQNRQRTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTLIIITRWGNQAERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00163 76 SESVYKK--NNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 161 LLIALLLLQNSAGTLSLLTLQYKPPMQLFtyadklWWASCLLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00163 154 LLVGIFYLYNNSGSLSFFLLNFFGSLNFL------WYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 241 GYGMIRVMSLLEPLSKELSYPFLIFALWGVIMTASTCLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAH 320
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGH 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 321 GLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITALFNWSKWTLLFTGAG 400
Cdd:MTH00163 308 GLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLL 387
|
410 420 430
....*....|....*....|....*....|....*...
gi 2554491083 401 TLITASYSLYMFLVTQQGPLPPHIIALDPTHSREHLLM 438
Cdd:MTH00163 388 SFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLL 425
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-458 |
2.54e-114 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 343.65 E-value: 2.54e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 1 MLKILVPTAMLLPMAwTIPFHQLWPTALLYSLTIAFMSLTWLKTTAeTGWSFLSPYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00014 1 MLKLIMPLISLLLLP-LIKYPWSWALTFSTLLLLSLFTLLNLYPMS-APYSMFTESLSSDMLSAPLITLTLWITALMILA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 81 SQNHMSSepQNRQRTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTLIIITRWGNQAERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00014 79 SFKIFQN--NKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLP 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 161 LLIALLLLQNSAGTLSLLTLQYKPPMQLFTyadKLWWASCLLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00014 157 LLMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 241 GYGMIRVMSLLEPLSKELSYPFLIFALWGVIMTASTCLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAH 320
Cdd:MTH00014 234 GYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAH 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 321 GLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITALFNWSKWTLLFTGAG 400
Cdd:MTH00014 314 GLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAIT 393
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2554491083 401 TLITASYSLYMFLVTQQGPLPPHIIALDPTHSREHLLMALHLIPLLLLITKPELLWGW 458
Cdd:MTH00014 394 SFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNW 451
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
10-418 |
1.80e-107 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 325.78 E-value: 1.80e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 10 MLLPMAWTIPFHQlWPTALLYSLTIAFMSLTWLKTTAeTGWSFLSPYMATDPLSTPLLVLTCWLLPLMILASQNHMSSEP 89
Cdd:MTH00205 8 SLLIILFVLKFKD-WSFFSNLLLIGLFFSSFFFSNSF-LMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 90 QNRQRTYisLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTLIIITRWGNQAERLNAGTYFLFYTLAGSLPLLIALLLLQ 169
Cdd:MTH00205 86 NSKLFTV--SVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLN 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 170 NSAGTLSLLTLQykpPMQLFTYADKLWWASCLLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMS 249
Cdd:MTH00205 164 SLNFSLSMFFNF---PLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 250 LLEPLSKELSYPFLIFALWGVIMTASTCLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFC 329
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 330 LANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITALFNWSKWTLLFTGAGTLITASYSL 409
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
....*....
gi 2554491083 410 YMFLVTQQG 418
Cdd:MTH00205 401 YLYSQSQHG 409
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
56-439 |
8.19e-88 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 276.58 E-value: 8.19e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 56 YMATDPLSTPLLVLTCWLLPLMILASQNhmssEPQNRQRTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTLIIIT 135
Cdd:COG1008 77 HLGVDGISLPLVLLTALLTPLAILASWN----EIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 136 RWGNqAERLNAGTYFLFYTLAGSLPLLIALLLLQNSAGTLS-----LLTLQYKPPMQLFtyadkLWWAsCLLAFLVKTPL 210
Cdd:COG1008 153 IWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTfdiaeLAAAPLPLTAQLL-----LFLA-FFIAFAVKVPM 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 211 YGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEPL-SKELSYPFLIFALWGVIMTASTCLRQPDLKSLIAY 289
Cdd:COG1008 226 FPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 290 SSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLG 369
Cdd:COG1008 306 SSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLG 385
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 370 LPPLPNLMGELMIITALFNWSKWTLLFTGAGTLITASYSLYMFLVTQQGPLPPHIIALDPTHSREHLLMA 439
Cdd:COG1008 386 LPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLA 455
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
56-439 |
7.93e-83 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 263.99 E-value: 7.93e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 56 YMATDPLSTPLLVLTCWLLPLMILASQNhmssEPQNRQRTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTLIIIT 135
Cdd:PRK05846 77 HLGVDGISLLLVVLTALLTPLAVLASWE----EIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 136 RWGnQAERLNAGTYFLFYTLAGSLPL----LIALLLLQNSAGTLSLLTLqYKPPMQLFTYadKLWWASCLLAFLVKTPLY 211
Cdd:PRK05846 153 VWG-GKNRIYAATKFFLYTLLGSLLMlvaiIYLVVVYYNATGTFDIADL-LNLPLPPGVQ--YWLFLAFFIAFAVKMPMF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 212 GIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEPL-SKELSYPFLIFALWGVIMTASTCLRQPDLKSLIAYS 290
Cdd:PRK05846 229 PLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 291 SVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGL 370
Cdd:PRK05846 309 SISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGL 388
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2554491083 371 PPLPNLMGELMIITALFNWSKWTLLFTGAGTLITASYSLYMFLVTQQGPLPPHIIALDPTHSREHLLMA 439
Cdd:PRK05846 389 PGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILL 457
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-426 |
3.05e-76 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 246.39 E-value: 3.05e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 57 MATDPLSTPLLVLTCWLLPLMILASQNhmssEPQNRQRTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTLIIITR 136
Cdd:TIGR01972 73 LGVDGISLLLVLLTALLTLLAILASWE----SIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 137 WGNQaERLNAGTYFLFYTLAGSLPLLIALLLLQ-NSAGTLSLLTLQYKPpmqlFTYADKLW-WASCLLAFLVKTPLYGIH 214
Cdd:TIGR01972 149 WGGP-NRIYAAMKFFLYTLAGSLLMLLAILGLYfLGGGTFDLLELLNLP----LPFGVQTWlFLAFFIAFAVKVPLFPLH 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 215 LWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRV-MSLLEPLSKELSYPFLIFALWGVIMTASTCLRQPDLKSLIAYSSVS 293
Cdd:TIGR01972 224 TWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSIS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 294 HMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPL 373
Cdd:TIGR01972 304 HMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGT 383
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 2554491083 374 PNLMGELMIITALFNWSKWTLLFTGAGTLITASYSLYMFLVTQQGPLPPHIIA 426
Cdd:TIGR01972 384 SGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVA 436
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
24-412 |
1.82e-74 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 241.89 E-value: 1.82e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 24 WPTALLYS---LTIAFMSLTWLKTTAETGWSFLSP--------YMATDPLSTPLLVLTCWLLPLMILASQNHMssepQNR 92
Cdd:MTH00204 35 WSLAILFStlvLWGAFDGEGQFQFINLIEWIISPTlnfqwgplVFAVDGVSLFFILLTTLLIPICILISWKSI----KFL 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 93 QRTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTLIIITRWGNQAERLNAGTYFLFYTLAGSLPLLIALLLLQNSA 172
Cdd:MTH00204 111 FKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSIT 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 173 GTLSLLTLQYkppMQLFTYADKLWWASCLLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLE 252
Cdd:MTH00204 191 GTTDYQILLN---IKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLF 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 253 PLSKELSYPFLI-FALWGVIMTASTCLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLA 331
Cdd:MTH00204 268 PAASEYFAPLIVmLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAV 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 332 NTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITALFNWSKWTLLFTGAGTLITASYSLYM 411
Cdd:MTH00204 348 TFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
|
.
gi 2554491083 412 F 412
Cdd:MTH00204 428 Y 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
52-412 |
4.99e-70 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 229.94 E-value: 4.99e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 52 FLSPYMATDPLSTPLLVLTCWLLPLMILASQNHMSSepqnRQRTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTL 131
Cdd:MTH00217 71 FGPVVFAVDGISIFFLILTALLTPICILISWNSIKF----LIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMF 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 132 IIITRWGNQAERLNAGTYFLFYTLAGSLPLLIALLLLQNSAGTL---SLLTLQYKPPMQLFTYAdklwwaSCLLAFLVKT 208
Cdd:MTH00217 147 LIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTdyqALCCLKIEKELQYFIFL------GFFLSLAIKI 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 209 PLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEPLSKELSYPF-LIFALWGVIMTASTCLRQPDLKSLI 287
Cdd:MTH00217 221 PKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLiQTLSLLAIIYGSLTTCRQVDLKRII 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 288 AYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLAN 367
Cdd:MTH00217 301 AYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLAN 380
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2554491083 368 LGLPPLPNLMGELMIITALFNWSKWTLLFTGAGTLITASYSLYMF 412
Cdd:MTH00217 381 ASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-401 |
2.77e-66 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 214.48 E-value: 2.77e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 113 ATEMIMFYLMFEATLIPTLIIITRWGNQAERLNAGTYFLFYTLAGSLPLLIALLLLQNSAGTLSLLTLQYKPPMQLFTYA 192
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 193 DKLWWASCLLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEPLSKELSYPFLIFALWGVIM 272
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 273 TASTCLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLA-NTNYERTHSRTMILARGLQT 351
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2554491083 352 AIPLMTTWWFIASLANLGLPPLPNLMGELMIITALFNWSKWTLLFTGAGT 401
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
58-410 |
7.03e-64 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 214.40 E-value: 7.03e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 58 ATDPLSTPLLVLTCWLLPLMILASQNHMssepQNRQRTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTLIIITRW 137
Cdd:MTH00226 99 AVDGISIYFIILTGFIVPCSILISWHSV----KYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIW 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 138 GNQAERLNAGTYFLFYTLAGSLPLLIALLLLQNSAGTLSLLTL---QYKPPMQLftyaDKLWWASCLLAFLVKTPLYGIH 214
Cdd:MTH00226 175 GSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLascSHVVSEQT----QKWIFLGIFLAMAVKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 215 LWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEPLSKELSYPFLI-FALWGVIMTASTCLRQPDLKSLIAYSSVS 293
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIaMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 294 HMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPL 373
Cdd:MTH00226 331 HMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
330 340 350
....*....|....*....|....*....|....*..
gi 2554491083 374 PNLMGELMIITALFNWSKWTLLFTGAGTLITASYSLY 410
Cdd:MTH00226 411 GNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
57-428 |
5.35e-50 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 177.53 E-value: 5.35e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 57 MATDPLSTPLLVLTCWLLPLMILASQNhmssePQNRQRTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTLIIITR 136
Cdd:PRK12561 55 LGVDGLSMPLVLLSGLITTLSIFASWK-----VTRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 137 WGNQaERLNAGTYFLFYTLAGSLPLLIALLLLQNSAGTLSL----LTLQ-YKPPMQLFTYAdklwwaSCLLAFLVKTPLY 211
Cdd:PRK12561 130 WGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFdlaeLGAKsYPLALELLLYA------GFLIAFGVKLPIF 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 212 GIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRV-MSLLEPLSKELSYPFLIFALWGVIMTASTCLRQPDLKSLIAYS 290
Cdd:PRK12561 203 PLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYS 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 291 SVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGL 370
Cdd:PRK12561 283 SVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLAL 362
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2554491083 371 PPLPNLMGELMIITALFNWSKWTLLF-------TGAGTLITASYSLYMFLVTQQGPLPPHIIALD 428
Cdd:PRK12561 363 PGMSGFVSELTVFLGITSSDVYSSTFrtitillAAVGLILTPIYLLSMLRRVFYGPRSELLPALA 427
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
99-410 |
2.26e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 165.46 E-value: 2.26e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 99 LLTSLQIFLIMAFGATE-MIMFYLMFEATLIPTLIIITRWGNQAERLNAGTYFLFYTLAGSLPLLIALLLlqnsagTLSL 177
Cdd:MTH00094 66 ILSNLLILICLLFFVSSnMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK------NFFF 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 178 LTLQYKppMQLFTYADKLWwasCLLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEPLske 257
Cdd:MTH00094 140 FSLCYF--DFFLSWEMFFI---LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV--- 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 258 LSYPFLIFALWGVIMTASTCLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYER 337
Cdd:MTH00094 212 YNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHI 291
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2554491083 338 THSRTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITALFNWSKWTLLFTGAGTLITASYSLY 410
Cdd:MTH00094 292 SKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLF 364
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
60-416 |
3.98e-45 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 162.62 E-value: 3.98e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 60 DPLSTPLLVLTCWLLPLMILASQNHMSSEPqnRQRTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTLIIITrWGN 139
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA-LGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 140 QAERLNAGTYFLFYTLAGSLPLLIALLLLQNSAGTLSLLTLQYKPPmQLFTYADKLWWASCLLAFLVKTPLYGIHLWLPK 219
Cdd:COG0651 152 TKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLA-ELDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 220 AHVEAPIAGSMILAAVLLKLGGYGMIRVMSLL--EPLSKELSYPFLIFALWGVIMTASTCLRQPDLKSLIAYSSVSHMGL 297
Cdd:COG0651 231 AYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 298 VTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLM 377
Cdd:COG0651 311 ILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFV 390
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2554491083 378 GELMIITALFNWSKWTLLFTGA-GTLITASYSLYMFLVTQ 416
Cdd:COG0651 391 SKWLLLQAALEAGAWLLAAVLLlSSLLTLAYFVRIFGRAQ 430
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-411 |
2.53e-42 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 157.18 E-value: 2.53e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 59 TDPLSTPLLVLTCWLLPLMILASQNhmssepqnrqrtyISLLTSLQIFLIMA--------FGATEMIMFYLMFEATLIPT 130
Cdd:PRK02546 85 ADGLSMPLILLTGFITTLAVLAAWP-------------VTFKPKLFYFLMLAmyggqiavFAVQDMLLFFLAWELELIPV 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 131 LIIITRWGNQaERLNAGTYFLFYTLAGSLPLLIALLLLQNSAGTLS-----LLTLQYKPPMQLFTYAdklwwaSCLLAFL 205
Cdd:PRK02546 152 YLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTfdmtaLAAKDFGLGFQLLCYA------GLLIAYG 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 206 VKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEPLSKELSYPFLI-FALWGVIMTASTCLRQPDLK 284
Cdd:PRK02546 225 VKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIvLGVVNIIYAALTSFAQRNLK 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 285 SLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIAS 364
Cdd:PRK02546 305 RKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACS 384
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2554491083 365 LANLGLPPLPNLMGELMIITALFNWSKWTLLF-------TGAGTLITASYSLYM 411
Cdd:PRK02546 385 LASLALPGMSGFVAELMVFVGFATSDAYTLPFrvvvvflAAVGVILTPIYLLSM 438
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
60-411 |
8.56e-42 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 155.10 E-value: 8.56e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 60 DPLSTPLLVLTCWLLPLMILASQnhmssePQNRQ-RTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTLIIITRWG 138
Cdd:CHL00011 83 DGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 139 NQaERLNAGTYFLFYTLAGSLPLLIALLLLQ---NSAGTLSLLTLQYKP-PMQLftyaDKLWWASCLLAFLVKTPLYGIH 214
Cdd:CHL00011 157 GK-KRLYSATKFILYTAGGSIFLLIGVLGMGlygSNEPTLNFETLANQSyPVAL----EILFYIGFLIAYAVKLPIIPLH 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 215 LWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRV-MSLLePLSKELSYPFL-IFALWGVIMTASTCLRQPDLKSLIAYSSV 292
Cdd:CHL00011 232 TWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELL-PHAHSIFSPWLvIVGAIQIIYAASTSLGQRNLKKRIAYSSV 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 293 SHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERThsRTMILAR--GLQTAIPLMTTWWFIASLANLGL 370
Cdd:CHL00011 311 SHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMASLAL 388
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 2554491083 371 PPLPNLMGELMIITALFNWSKWTLLF-------TGAGTLITASYSLYM 411
Cdd:CHL00011 389 PGMSGFVAELIVFFGIITSQKYLLMPkilitfvMAIGMILTPIYLLSM 436
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
53-429 |
2.66e-36 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 139.83 E-value: 2.66e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 53 LSPYMATDPLSTPLLVLTCWLLPLMILASqnhmsSEPQNRQRTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTLI 132
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSS-----DESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 133 IITRWGNQaERLNAGTYFLFYT-------LAGSLPLLIALLLLQNSAGTLSLLTLQYKPPMQLFtyadklwwASCLLAFL 205
Cdd:PRK06473 146 LIAIWGGQ-RRGYAATKFLLYTaisgiliLVSFLGLVWLSGASSFDYEPLRSHTLPLSTQLLLL--------APILVGFG 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 206 VKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEPLSKELSYPFL-IFALWGVIMTASTCLRQPDLK 284
Cdd:PRK06473 217 IKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMK 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 285 SLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGL---QTAIPLMTTWWF 361
Cdd:PRK06473 297 KMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMI 376
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2554491083 362 IASLANLGLPPLPNLMGELMIITALFNWSKWTLLFTGAGTLITASYSLYMFLVTQQGPLPPHIIALDP 429
Cdd:PRK06473 377 LGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPR 444
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-110 |
8.12e-32 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 117.24 E-value: 8.12e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 1 MLKILVPTAMLLPMAWTIPFHQLWPTALLYSLTIAFMSLTWLKTTAETGWSFLSPYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 2554491083 81 SQNHMSSEPQNRQRTYISLLTSLQIFLIMA 110
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
60-387 |
5.46e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 119.31 E-value: 5.46e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 60 DPLSTPLLVLTCWLLPLMILASQNHMSSEPQNRqrTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTLIIITRWGN 139
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPE--WYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 140 QAERLNAGTYFLFYTLAGSLPLLIALLLLQNSAGTLSLLTLQYKPPMQLFTYADKLW----WAS------CLLAFLVKTP 209
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGGLAgnppLALgvalalALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 210 LYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVM-------SLLEPLSKELSYPFLIFALWGVIMTASTCLRQPD 282
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 283 LKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFI 362
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340
....*....|....*....|....*
gi 2554491083 363 ASLANLGLPPLPNLMGELMIITALF 387
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALL 423
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
53-407 |
1.08e-26 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 112.50 E-value: 1.08e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 53 LSPYMATDPLSTPLLVLTCWLLPLMIlasqnHMSSEPQNRQRTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTLI 132
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLNSLLTWIAI-----YSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 133 IITRWGNQaERLNAGTYFLFYT-------LAGSLPLLIALLLLQNSAGTLSLLTLQYKPPMQLFTyadklwwaSCLLAFL 205
Cdd:PRK07363 146 LIAIWGGE-KRGYASIKFLIYTavsgllvLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILLT--------GLLLGFG 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 206 VKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEPLSKELSYPFLifALWG---VIMTASTCLRQPD 282
Cdd:PRK07363 217 IKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGL--AIIGtisVIYGALSAIAQKD 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 283 LKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAI---PLMTTW 359
Cdd:PRK07363 295 IKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIrglPLTSAL 374
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 2554491083 360 WFIASLANLGLPPLPNLMGELMIITALFNWSKWTLLFTGAGTLITASY 407
Cdd:PRK07363 375 LVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY 422
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
201-394 |
1.47e-24 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 105.78 E-value: 1.47e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 201 LLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLE--PLSKELSYPFLIFALWGVIMTASTCL 278
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaaIGSDFPGRLLLIFGLLSVLVAAFFLL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 279 RQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTT 358
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGW 380
|
170 180 190
....*....|....*....|....*....|....*.
gi 2554491083 359 WWFIASLANLGLPPLPNLMGELMIITALFNWSKWTL 394
Cdd:PRK06458 381 GLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLI 416
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-407 |
8.65e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 103.81 E-value: 8.65e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 58 ATDPLSTPLLVLTCWLLPLMILASQnhmsSEPQNRQRTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPT--LIIIT 135
Cdd:PRK08375 74 RADSLSALFLLVTSILAIAALLYAI----GYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSyaLVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 136 RwgnQAERLNAGTYFLFYTLAGSLPLLIALLLLQNSAGTLSLLTLQYK-PPMQLFTYAdklwWASCLLAFLVKTPLYGIH 214
Cdd:PRK08375 150 G---DRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGAlAENPTVVTA----FGFVLLALALKAAVFPLH 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 215 LWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEPLSKE----LSYPFLIFALWGVIMTASTCLRQPDLKSLIAYS 290
Cdd:PRK08375 223 TWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRfalgLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 291 SVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGL 370
Cdd:PRK08375 303 TVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGV 382
|
330 340 350
....*....|....*....|....*....|....*...
gi 2554491083 371 PPLPNLMGELMIITALFN-WSKWTLLFTGAGTLITASY 407
Cdd:PRK08375 383 PPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
83-387 |
2.31e-19 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 90.95 E-value: 2.31e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 83 NHMSSepqNRQRTYISLLTSLQIF-LIMAFGATEMIMFYLMFEATLIPTLIIITRWGNQAERLNAGTYFLFYTLAGSLPL 161
Cdd:PRK08667 102 EHMSS---NERANLLSALTALFILsMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFL 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 162 LIALLLLQNSAGTLSLLTLQYKPPMQLFTYAdklwwaSCLLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGG 241
Cdd:PRK08667 179 MLGIIVLFIQTGSFELSPLGASAGILSLVFL------LLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAV 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 242 YGMIRVmsLLEPLSKELSYPFLIF------ALWGVIMTastcLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTG--- 312
Cdd:PRK08667 253 YGLVRF--LMDVLSPELWWGVLILlagsisALLGVIYA----LKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGldt 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 313 --------ALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIIT 384
Cdd:PRK08667 327 lallalggALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYE 406
|
...
gi 2554491083 385 ALF 387
Cdd:PRK08667 407 SFF 409
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
201-413 |
1.36e-17 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 84.81 E-value: 1.36e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 201 LLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEP--LSKELSYPFLIFALWGVIMTASTCL 278
Cdd:PRK08676 213 FIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQsgAAEQFSNVLIGLGIFSIAVAAFSML 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 279 RQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLA---NTNYERTHSRTMILARGLQtaiPL 355
Cdd:PRK08676 293 SQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAgilHRQYRSDRFDRIFDVFRLQ---PV 369
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 2554491083 356 MTTWWFIASLANLGLPPLPNLMGELMIITALFNWSKWTLLFTGAGTLITASYSLYMFL 413
Cdd:PRK08676 370 AAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFLL 427
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-410 |
1.41e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 85.02 E-value: 1.41e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 109 MAFGATEMIMFYLMFEATLIPTLIIITRwGNQAERLNAGTYFLFYTLAGSLPLLIALLLLQNSAGTLSLLTLQYK----P 184
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRldelP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 185 P---MQLFtyadklwwASCLLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEPlSKELSYP 261
Cdd:PRK12665 205 SgtrTALF--------AVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 262 FLIFALWGVIMTASTCLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSR 341
Cdd:PRK12665 276 LMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSS 355
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2554491083 342 TMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITA---LFNWSKWTLLftgAGTLITASYSLY 410
Cdd:PRK12665 356 SLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAgaeDGTWLAWALV---AGGVVTSLLTLY 424
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-410 |
7.50e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 82.69 E-value: 7.50e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 91 NRQRTYISLLTSLQIFLIMAFGATEMIMFYLMFEATLIPTLIIITrWGNQAERLNAGTYFLFYTLAGSLPLLIALLLLQN 170
Cdd:PRK07234 91 AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 171 SAGTLSLLTLQYKPPMQLftyadklwwASCLLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSL 250
Cdd:PRK07234 170 ANGTFAFSGLATADPEAF---------ALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 251 LEPLSKELSYPFLIFALWGVIMTastcLRQPDLKSLIAYSSVSHMGLVTAGiliqtswGLTGALiLMIAHGLTSSALFCL 330
Cdd:PRK07234 241 VPGLDLIVRIFGVGTALLGVLFA----LLEKDLKRMLAFSTISQLGFILAA-------PLVGGL-YALAHGLVKSTLFLC 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 331 ANTNYERTHSRTMILARGLQTAIPLMttwwfIASLANLGLPPLPNLMGELMIITALFNWSKWTLLFTGAGTLITASYSLY 410
Cdd:PRK07234 309 AGALPSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNLAAVGTAASFWKFIF 383
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
97-386 |
1.44e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 75.80 E-value: 1.44e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 97 ISLLTSLQIFLimafgATEMIMFYLMFEATLIPTLIIITRwGNQAERLNAGTYFLFYTLaGSLPLLIALLLLQNSAGTLS 176
Cdd:PRK08668 106 MSLAGVLGVFL-----ANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVLSAI-GAYAMLYAIFLIYAKTGTFD 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 177 lltlqYKPPMQLFTYADKLWWASCLLAFLV-----KTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLL 251
Cdd:PRK08668 179 -----FADISQGLINDTSTGFALIVFLFLLafgvaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 252 ePLSKELS---------YPFLIFALWG---VIMTASTCLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIA 319
Cdd:PRK08668 254 -PGTKLFSefgtyrgvpLFNYILAWLGnisIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFN 332
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2554491083 320 HGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITAL 386
Cdd:PRK08668 333 HALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL 399
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
105-388 |
3.41e-14 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 74.42 E-value: 3.41e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 105 IFLIMAFGATEMIM------FYLMFEATLIpTLIIITRWGNQAERLNAGTYFLFYTLAGSLPLLIALLLLQNSAGTLSLL 178
Cdd:PRK08377 113 LFLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 179 TLQYKPPMqLFTYADKLWWASCLLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEPLSKEL 258
Cdd:PRK08377 192 HIAQLAGT-IDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 259 SYPFL--IFALWGVIMTASTCLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYE 336
Cdd:PRK08377 271 SVLKLviIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGI 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 2554491083 337 RTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITALFN 388
Cdd:PRK08377 351 TLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLS 402
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
120-439 |
6.45e-14 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 73.45 E-value: 6.45e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 120 YLMFEATLIPTLIIITrWGNQAERLNAGTYFLFYTLAGSLPLLIALLLLQNSAGTLSLLTLQYKPPMQLFTYADKLWWAS 199
Cdd:PRK12663 134 YVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 200 CLLAFLVKTPLYGIHlWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEPLSKELSYPFLIF-ALWGVIMTASTCL 278
Cdd:PRK12663 213 FLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATmAAITMVIGALGAL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 279 RQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTT 358
Cdd:PRK12663 292 AYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGA 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 359 WWFIASLANLGLPPLPNLMGELMIITALFNWSKWTLLFTGAGTLITASYSLY-MFLVTQQGPLPPHIIALDPTHSREHLL 437
Cdd:PRK12663 372 LFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFrIFFLAYWGDKDGEEVNFKPIPLYRKLP 451
|
..
gi 2554491083 438 MA 439
Cdd:PRK12663 452 LS 453
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
214-415 |
2.16e-13 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 72.11 E-value: 2.16e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 214 HLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMIRVMSLLEpLSKELSYPFLIFALWGVIMTASTCLRQPDLKSLIAYSSV 292
Cdd:COG1009 231 HFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFA-LSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTV 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 293 SHMGLVTAGILIQtswGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPP 372
Cdd:COG1009 309 SQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPP 385
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 2554491083 373 LPNLMGELMIITALFNWSKWTLLFTGAGTL---ITASYSLYMFLVT 415
Cdd:COG1009 386 FAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLV 431
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-387 |
2.65e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 71.52 E-value: 2.65e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 201 LLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEPLSKELSYPF-LIFALWGVIMTASTCLR 279
Cdd:PRK07691 216 LFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLiLILALLTIIFGVIGAVA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 280 QPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTW 359
Cdd:PRK07691 296 YFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWM 375
|
170 180
....*....|....*....|....*...
gi 2554491083 360 WFIASLANLGLPPLPNLMGELMIITALF 387
Cdd:PRK07691 376 FFIAALSLAGIPPLSGFYGKFFIVEGTF 403
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
196-387 |
7.50e-13 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 70.69 E-value: 7.50e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 196 WWASC--LLAFL---VKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRV-MSLLEPLSKELSYPFLIF---- 265
Cdd:PRK06521 207 FWASLvfLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVvFDLLGAPGWWWGVLVLALgais 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 266 ALWGVIMTAStclrQPDLKSLIAYSSVSHMGLVTAGI---LI--------QTSWGLTGALILMIAHGLTSSALFCLANTN 334
Cdd:PRK06521 287 AVLGVLYALA----EHDLKRLLAYSTIENIGIIFVGLglaMVfiaygmplLAALALTAALYHLLNHALFKSLLFLGAGAV 362
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 2554491083 335 YERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITALF 387
Cdd:PRK06521 363 LHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLL 415
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
84-420 |
1.82e-12 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 69.40 E-value: 1.82e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 84 HMSSEPQNRQRTYISLLtslqIFLIMAFG---ATEMIMFYLMFEATLIPTLIIITRWGNQAERLNAGTYFLFYTLAGSLP 160
Cdd:PRK12646 101 YLSSRKDNLPRFYFYLT----LFMFSMIGivlSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLA 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 161 LLIALLLLQNSAGTLSLLTLQykppMQLFTYADKLWWASCLLAFLV----KTPLYGIHLWLPKAhVEAPIAGSMIL-AAV 235
Cdd:PRK12646 177 LLVGFIMLYIMTGTNNITEIL----GQADHIKNHGLFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLhSAT 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 236 LLKLGGYGMIRVMSLLEpLSKELSYPFLIFALWGVIMTASTCLRQPDLKSLIAYSSVSHMGLVTA-----GILIQTSWG- 309
Cdd:PRK12646 252 MVKAGIFLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAmvgigGGYAQHQQDa 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 310 --------LTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELM 381
Cdd:PRK12646 331 iasiyvfvLFAALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEM 410
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2554491083 382 IITALFN---WSKWTLLFTGAGTLI-------TASYSLYMFLVTQQGPL 420
Cdd:PRK12646 411 FLDALTQtgqLSQFSLISMIIIVFIgviasifTFTYALYMVKEVFWGKY 459
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
214-409 |
2.15e-12 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 69.30 E-value: 2.15e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 214 HLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEPLSKeLSYPFLIFALWGVIMTASTCLRQPDLKSLIAYSSVS 293
Cdd:PRK12650 228 HFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAV-WNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVS 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 294 HMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPL 373
Cdd:PRK12650 307 QLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPL 386
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 2554491083 374 PNLMGELMIITALF-----NWSKWTLLFT-GAGTLITASYSL 409
Cdd:PRK12650 387 FGFVSKEGMLTAFLeapggNAGVVLLLVGaALGAVFTFAYSA 428
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-402 |
3.92e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 68.41 E-value: 3.92e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 214 HLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMIRvmslLEPLSKELSYPFLIFALWGVI-MTASTCL--RQPDLKSLIAY 289
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGGLtMLTGALLavRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 290 SSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLG 369
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
170 180 190
....*....|....*....|....*....|...
gi 2554491083 370 LPPLPNLMGELMIITALFNWSKWTLLFTGAGTL 402
Cdd:PRK12647 370 LPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
99-388 |
8.60e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 67.04 E-value: 8.60e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 99 LLTSLQIFLIMAFGatEMIMFYLMFEATLIPTLIIITRWGNQAERLNAGTYFLFYTLAGSLPLLIALLLLQNSAGTLSLL 178
Cdd:PRK08376 128 LLLELGMLGMAITG--DLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMA 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 179 TLQYKPPMQLfTYADKLWWASCLLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILaaVLLKLGG-YGMIRVM-SLLEPL-- 254
Cdd:PRK08376 206 YLAVKMSENP-TVVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLfSIYGPAin 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 255 SKELSYPFLIFALWGVIMTASTCLRQPDLKSLIAYSSVSHMG---------LVTAGILIQTSWG---LTGALILMIAHGL 322
Cdd:PRK08376 283 LATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGeiaLAGGIYHIVNHAL 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2554491083 323 TSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMII--TALFN 388
Cdd:PRK08376 363 YKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYesSALFN 430
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-397 |
1.60e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 66.30 E-value: 1.60e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 201 LLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVM-----SLLEPLSKELSYPFLIFALWGVIMTAS 275
Cdd:PRK12662 216 MVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkANFVFTTLPFNNVFMILAALAIVFGSV 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 276 TCLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANT---NYERTHSRTMIlarGLQTA 352
Cdd:PRK12662 296 LAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL---NLWKS 372
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 2554491083 353 IPLMTTWWFIASLANLGLPPLPNLMGELMIITALFNWSKWTLLFT 397
Cdd:PRK12662 373 MPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVV 417
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
188-413 |
2.99e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 65.22 E-value: 2.99e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 188 LFTYADKLWWASCLLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRV------MSLLEPLSKELSYp 261
Cdd:PRK06589 204 LFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKIllyifgLSYLQRIFAEFNW- 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 262 fLIFALWGVIMTAST-CLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHS 340
Cdd:PRK06589 283 -LIFIPIVSIFYSSLkALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKE 361
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2554491083 341 RTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITALFNWSKWTLLFTGAGTLITASYSLYMFL 413
Cdd:PRK06589 362 DQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVVIASSILSALYL 434
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
97-345 |
4.14e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 64.56 E-value: 4.14e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 97 ISLLTSLqIFLIMAFGATEMIMFYLMFEATLIPTLIIITRWGNQAERLNAGTYFLFYTLAGSLPLLIALLLLQNSAGTLS 176
Cdd:MTH00062 75 FFLFLSL-IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 177 LLTLQYKPPMQLFTYadklwWASCLLaFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEPLSK 256
Cdd:MTH00062 154 FSDWGSDDSVSLIVY-----YVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 257 eLSYPFLIFALWGVIMTAStcLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYE 336
Cdd:MTH00062 228 -LGYLFLCCLFSVFFLITA--CSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYE 304
|
....*....
gi 2554491083 337 RTHSRTMIL 345
Cdd:MTH00062 305 VSGSRNWVL 313
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
60-383 |
1.17e-10 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 63.82 E-value: 1.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 60 DPLSTPLLVLTCWLLPLMILASQNHMSSEPQ-NRQRTYISLLTSLQIFLIMAfgaTEMIMFYLMFEATLIPTLIIITRWG 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHvPRFLCYLSLFTFLMMVLVTS---DNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 139 NQAERLNAGTYFLFYTLAGSLPLLIALLLLQNSAGTLSLLTLQ---YKPPMQLFTYADKLWWASCLLAFLV--------- 206
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsVGSGIMDRGYYGGGAYESPLAPFAIigillligc 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 207 --KTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMsllePLSKELSYPFLIFALWGVI---MTASTCLRQP 281
Cdd:MTH00032 236 igKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQN 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 282 DLKSLIAYSSVSHMGLVTAGILIQTSWGLtgALILMIAHGLTSSALFCLA-----NTNYERTHSRTMilaRGLQTAIPLM 356
Cdd:MTH00032 312 DLKKVIAYSTCSQLGYMVLIIGIEGSHNV--GLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSIPFT 386
|
330 340
....*....|....*....|....*..
gi 2554491083 357 TTWWFIASLANLGLPPLPNLMGELMII 383
Cdd:MTH00032 387 YTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
214-402 |
1.37e-10 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 63.07 E-value: 1.37e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 214 HLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMIRVMSLLEPLSKELSYPFLIFALWGVIMTASTCLRQPDLKSLIAYSSV 292
Cdd:PRK06525 227 YSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTI 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 293 SHMGLVTAGILIQ---TSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLG 369
Cdd:PRK06525 306 TQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITG 385
|
170 180 190
....*....|....*....|....*....|...
gi 2554491083 370 LPPLPNLMGELMIITALFNWSKWTLLFTGAGTL 402
Cdd:PRK06525 386 VPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
201-413 |
2.08e-09 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 59.52 E-value: 2.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 201 LLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEPLSkelsYPFLIFALWGVIMTastcLRQ 280
Cdd:PRK12668 190 LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELLI----YIGAAMAVYGVFFA----LLE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 281 PDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWW 360
Cdd:PRK12668 262 NDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTELGGLYRSMPLTALFC 341
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2554491083 361 FIASLANLGLPPLPNLMGELMIITAL----FNWSKWTLLFTGAGTLITASYSL--YMFL 413
Cdd:PRK12668 342 LVGALSISAFPLFSGFVSKSMIISAAgedhYVWVWLLLLLASAGTFLHFGIKLpyFAFF 400
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
214-421 |
9.00e-09 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 57.43 E-value: 9.00e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 214 HLWLPKAHVEAPIAGSMILAAVLlKLGGYGM-IRVMS-LLEPLSKELSYPFLIFA----LWGVIMTastcLRQPDLKSLI 287
Cdd:COG1007 223 HMWTPDVYEGAPTPVTAFLATAP-KIAAFAAlLRLLVeAFPGLAADWQLLLAVLAvlsmTVGNLAA----LAQTNVKRML 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 288 AYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALF-CLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLA 366
Cdd:COG1007 298 AYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLS 377
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 367 NLGLPPLPNLMGELMIITALFNWSKWTLLFTGA-GTLITASYSL----YMFLVTQQGPLP 421
Cdd:COG1007 378 LAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVlNSVISAYYYLrvvkAMYFDEPEEEAP 437
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
138-403 |
1.09e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 54.09 E-value: 1.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 138 GNQAERLNAGTYFLFYTLAGSLPLLIALLLLQNSAGTLSLLTLQYKppMQLFTYAD-KLWWASCLL---AFLVKTPLYGI 213
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQR--IAQLPAADrALLEAGAALllvVFLIKAAMWPL 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 214 HLWLPKAHVEA--PIAGsmiLAAVLLKLGGYGMIRVMSLLEPLSKELSYPFLIFALW---------GVI-MTASTCLRQp 281
Cdd:PRK12666 230 NFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLpgglatlafGAIgVLAAQRLRR- 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 282 dlksLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLAN-----------------TNYERTHSRTMI 344
Cdd:PRK12666 306 ----LAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADlverqrgaaadrlavtpELYDLDEEEEEE 381
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2554491083 345 LARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITALFN-------WSKWT-LLFTGAGTLI 403
Cdd:PRK12666 382 VGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLNppgagaaWWLWAlVLLSGLAALI 448
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
173-388 |
1.82e-07 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 53.29 E-value: 1.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 173 GTLSLLTLQYKPPMQLFtyaDKLWWASCLLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLE 252
Cdd:PRK08042 162 GTLDLRLLDMRMQQLPL---GSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGG 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 253 PLSKELSYPFLIFALWGVIMTASTCLRQPDLKSLIAYSSVSHMGLVTAGI--------LIQTSW---GLTGALILMIAHG 321
Cdd:PRK08042 239 NAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLgagvtgiaLEQPALialGLVGGLYHLLNHS 318
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2554491083 322 LTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITALFN 388
Cdd:PRK08042 319 LFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
76-381 |
8.55e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 51.37 E-value: 8.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 76 LMILASQNHMSSEPQNRQRTYISLLTSLQIFLIMAFGATEMIMFyLMFEATLIPTLIIITRWGNQAERLNAGTYFLFYTL 155
Cdd:PRK12649 94 VIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITA 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 156 AGSLPLLIALLLLQNSAGTLSLLTLQYKPPMQLFTYADKLWWASCLLAFL---VKTPLYGIHLWLPKAhVEAPIAGSMIL 232
Cdd:PRK12649 173 GGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFL 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 233 -AAVLLKLGGYGMIRVmsllEPLSKELSYPFLIFALWGVI---MTASTCLRQPDLKSLIAYSSVSHMGLVTAGILIQT-- 306
Cdd:PRK12649 252 hSATMVKAGVYLVARI----HPIFSGTEAWFILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTyh 327
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2554491083 307 --SWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELM 381
Cdd:PRK12649 328 epGLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEM 404
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
263-385 |
9.58e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 51.19 E-value: 9.58e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 263 LIFALWGVIMTASTCLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRT 342
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 2554491083 343 MILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITA 385
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQA 392
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
201-396 |
1.06e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 50.72 E-value: 1.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 201 LLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRV-MSLLEPLSKELSYPFLIFALWGVIMTASTCLR 279
Cdd:TIGR01770 210 LVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLfLYILFGFSEAWQIFLAIIAFLSMLIGNFGALA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 280 QPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALF-CLANT-NYERTHSRTMILARGLQTAIPLMT 357
Cdd:TIGR01770 290 QKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgVLSLLrSYKDEWIEYISDFAGLFKTNPILA 369
|
170 180 190
....*....|....*....|....*....|....*....
gi 2554491083 358 TWWFIASLANLGLPPLPNLMGELMIITALFNWSKWTLLF 396
Cdd:TIGR01770 370 ILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAV 408
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
214-328 |
1.25e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 50.59 E-value: 1.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 214 HLWLPKAHVEAPIAGSMILAAVLlKLGGYGMI-RV-MSLLEPLSKELSYPFLIFALWGVIMTASTCLRQPDLKSLIAYSS 291
Cdd:PRK05777 224 HMWTPDVYEGAPTPVTAFLATAP-KIAAFAVLlRLlVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
90 100 110
....*....|....*....|....*....|....*..
gi 2554491083 292 VSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALF 328
Cdd:PRK05777 303 IAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
197-418 |
7.93e-06 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 48.48 E-value: 7.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 197 WASCLLAFLV------KTPLYGIHLWLPKAhVEAPIAGS-MILAAVLLKLGGYGMIRvmslLEPLSKELSYPFLIFALWG 269
Cdd:PRK07376 224 WLALLLCILVflgpmaKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGVFLVAR----MYPVFEQFPAVMTVIAWTG 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 270 VI---MTASTCLRQPDLKSLIAYSSVSHMGLVTAGILIqtswGLTGA-LILMIAHGLTSSALFCLANT---------NYE 336
Cdd:PRK07376 299 AItafLGASIALTQNDIKKGLAYSTISQLGYMVMAMGC----GAYSAgLFHLMTHAYFKAMLFLGSGSvihgmeevvGHD 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 337 RTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITALFNWSK--WTLLFTGAGtlITASYSLYMFLV 414
Cdd:PRK07376 375 PVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPalWFVGFLTAG--MTAFYMFRMYFL 452
|
....
gi 2554491083 415 TQQG 418
Cdd:PRK07376 453 TFEG 456
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
205-410 |
3.59e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 46.46 E-value: 3.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 205 LVKTPLYGIHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMIRvmslLEPLSKELS---YPFLIFALWGVIMTASTCLRQ 280
Cdd:PRK12644 214 LSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVAR----LAPGFADVPvwrPTVLVLGLATMLLGGWRALRQ 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 281 PDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWW 360
Cdd:PRK12644 289 HDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAVVA 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 2554491083 361 FIASLANLGLPPLPNLMGELMIITALFN------WSKWTLLFTGAGTLITASYSLY 410
Cdd:PRK12644 369 ALAAASMAGLPPLLGFVAKEAALEAVLHdgalgpAGPVVLAGIVLGSILTVAYSLR 424
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
112-388 |
3.77e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 45.79 E-value: 3.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 112 GATEMIMFYLMFEATLIPTLIIITRWGNQAERLNAG-TYFLFYTLAGSLPLLIALLLLQNSAGT-LSLLTLQYKPPMQLF 189
Cdd:MTH00196 11 SSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGlKYFVLGALSSGLFLFGCALLCGTTGGLhLSYINLVLNSGQSFS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 190 TYADKLWWASCLLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLlKLGGYGMIRVMSLLEPLskelsypFLIFALWG 269
Cdd:MTH00196 91 SVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVP-KLGIFSILVSIGLNVNI-------LLIGGLFS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 270 VIMTASTCLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLA---NTNYErthsrTMILA 346
Cdd:MTH00196 163 LFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIIlalNVYKN-----LIIEF 237
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2554491083 347 RGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITALFN 388
Cdd:MTH00196 238 SGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVV 279
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
200-415 |
4.14e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 45.84 E-value: 4.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 200 CLLAFLV---KTPLYGIHLWLPKAhVEAPIAGS-MILAAVLLKLGGYGMIRVMSLLEPLSKELSYPFLIFALwGVIMTAS 275
Cdd:MTH00020 213 CLFLFIGavgKSAQLGLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSL-TVFFAAT 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 276 TCLRQPDLKSLIAYSSVSHMG-LVTAGILIQTSWGltgaLILMIAHGLTSSALFCLANTN-YERTHSRTMILARGLQTAI 353
Cdd:MTH00020 291 VGLVQNDLKKVIAYSTCSQLGyMVVACGLSHYSIS----LFHLMNHAFFKALLFLSAGSViHALSDEQDMRKMGGLISFL 366
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2554491083 354 PLMTTWWFIASLANLGLPPLPNLMGELMIITALFN-----WSKWTLLFTgagTLITASYSLYMFLVT 415
Cdd:MTH00020 367 PLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGqyyliFAYWLGCFS---ALLTAFYSIRLIYLT 430
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
271-373 |
6.74e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 45.57 E-value: 6.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 271 IMTASTCLRQPDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQ 350
Cdd:PRK12648 283 LLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLR 362
|
90 100
....*....|....*....|...
gi 2554491083 351 TAIPLMTTWWFIASLANLGLPPL 373
Cdd:PRK12648 363 RLMPITATLAMVAAAAMAGVPLL 385
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
202-387 |
1.56e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 44.01 E-value: 1.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 202 LAFLVKTPLYGIHL--WLPKAHVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEPLSKE-LSYPFLIFALWGVIMTASTCL 278
Cdd:PRK06459 166 FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGyFGLTILAIGAFSILFGALYAY 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 279 RQPDLKSLIAYSSVSHMG--LVTAGILIQTS--------WGLTGALILMIAHGLTSSALFCLANTnyerTHSRTMILARG 348
Cdd:PRK06459 246 VSENVKGLLAFSTIENNGaiLVALGLYMVTKqlitsiehFSLITVILYSFAHSVAKTGLFLSSGL----QEKQSITYSKK 321
|
170 180 190
....*....|....*....|....*....|....*....
gi 2554491083 349 LQTAIPLMTTWWFIASLAnlGLPPLPNLMGELMIITALF 387
Cdd:PRK06459 322 IRNRWIELGLTLLASSLS--GLLPNIGGVASWLLLESLF 358
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
214-401 |
6.37e-04 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 42.20 E-value: 6.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 214 HLWLPKAhVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEpLSKELSYPFLIFALWGVIMTASTCLRQPDLKSLIAYSSVS 293
Cdd:PRK07390 241 HLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQPVLA-LSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSA 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 294 HMGLVTagILIQTSWGLTgALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTAIPLMTTWWFIASLANLGLPPL 373
Cdd:PRK07390 319 YLGLVF--IAVGLQQPDI-ALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPL 395
|
170 180 190
....*....|....*....|....*....|.
gi 2554491083 374 PNLMGELMIITALFNWSKW---TLLFTGAGT 401
Cdd:PRK07390 396 GGFWALLRLADGLWAVSPWlvgVLLLVNALT 426
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
201-423 |
1.11e-03 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 41.45 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 201 LLAFLVKTPLYGIHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMIRvMSLLEPLSKELSYPFLIFAL----WGVImtas 275
Cdd:PRK12645 217 LLGAFTKSAQFPFYIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVAR-FTPIFAGSQVWFWTVTLVGLitlfWGSL---- 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 276 TCLRQPDLKSLIAYSSVSHMGLVT-------AGILIQTSWG------LTGALILMIAHGLTSSALFCLANTNYERTHSRT 342
Cdd:PRK12645 291 NAVKQTDLKGILAFSTVSQLGLIMsllgigaASLHYQGDDSkiyaaaITAAIFHLINHATFKGSLFMIVGIVDHETGTRD 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 343 MILARGLQTAIPLMTTWWFIASLANLGLPPLPNLMGELMIITA--------LFNWSKWTLLF---TGAGTLITASYSLYM 411
Cdd:PRK12645 371 IRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESmlnateanLFSLDTWGVLFpviAWVASVFTFVYSIIF 450
|
250
....*....|..
gi 2554491083 412 FLVTQQGPLPPH 423
Cdd:PRK12645 451 IFKTFFGKYKPE 462
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
198-421 |
1.14e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 41.22 E-value: 1.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 198 ASCLLAF--LVKTPLYGIHLWLPKAhVEAPIAGSMILAAVLLKLGGYGMIRVMSLLEpLSKELSYPFLIFALWGVIMTAS 275
Cdd:PRK08168 202 AALLLVLavILKTAQLPVHGWLIQV-MEAPTPVSALLHAGVVNLGGFVLIRFAPLLE-QAPPARWLLVLVGLATAVLAGL 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 276 TCLRQPDLKSLIAYSSVSHMGLvtagILIQTSWGL-TGALILMIAHGLTSSALFCLANTNYERTHSRTM----------- 343
Cdd:PRK08168 280 VMLTRISIKVRLAWSTVAQMGF----MLLECGLGLyELALLHLVAHSLYKAHAFLSASEAVRDTRLRRLqgpqsaagvvs 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 344 ILARGLQTA--IPLMTTWWFIASLANLGLPPLPNLMGELMIITALFNWSKWTLLFTGAGTLI--TASYSLYMFLVTQQGP 419
Cdd:PRK08168 356 LLLAPLLSAalVLLLQSLLPLGAWPWWWSAVLALAWAPLLWQPCASGASTLSGLGLGLLLVAglTALAFLAHLLPLGLAD 435
|
..
gi 2554491083 420 LP 421
Cdd:PRK08168 436 AP 437
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
200-408 |
3.45e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 39.99 E-value: 3.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 200 CLLAFLV---KTPLYGIHLWLPKAhVEAPIAGS-MILAAVLLKLGGYGMIRVMSLLEPLSKELSYPFLIFALWGVImTAS 275
Cdd:MTH00210 214 CLLLFIGavgKSAQLGLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFF-AAT 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 276 TCLRQPDLKSLIAYSSVSHMGLVtagILIQTSWGLTGALILMIAHGLTSSALFCLANTN-YERTHSRTMILARGLQTAIP 354
Cdd:MTH00210 292 VGVVQNDLKKVIAYSTCSQLGYM---VMVCGISNYSTSLFHLMNHAFFKALLFLSAGSViHAVSDEQDMRKMGGLIKSIP 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 2554491083 355 LMTTWWFIASLANLGLPPLPNLMGELMIITALFNWSKWTLLF-TGAGT-LITASYS 408
Cdd:MTH00210 369 FTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYwLGSFSaLLTAFYS 424
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
201-413 |
3.85e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 39.10 E-value: 3.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 201 LLAFLVKTPLYGIHLWLPKAHVEAPIAGSMILAAVLlKLGGYGMirVMSLLEplSKELSYPFLIFALWGVIMTASTCLRQ 280
Cdd:MTH00144 91 LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFL--LSNFLD--LYWLAYLLCVISVLSALVGSIGGLNQ 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554491083 281 PDLKSLIAYSSVSHMGLVTAGILIQTSWGLTGALILMIAHGLTssaLFCLANTNYerthSRTMILARGLQTAIPLMTTWW 360
Cdd:MTH00144 166 TQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFL---FFSLWSGDS----GSMKDLGSLKPSYKTGLSIIS 238
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 2554491083 361 FIASLAnlGLPPLPNLMGELMIITALFNWSKWTLLFTG-AGTLITASYSLYMFL 413
Cdd:MTH00144 239 LLLSLG--GLPPFLGFCSKLLVLISSMESSPLLLILLLlLGSLISLFFYLSVFF 290
|
|
| |
